2022-09-04T09:09:41,188 Created temporary directory: /tmp/pip-ephem-wheel-cache-_lsbyks2
2022-09-04T09:09:41,193 Created temporary directory: /tmp/pip-build-tracker-xc8j8bdo
2022-09-04T09:09:41,194 Initialized build tracking at /tmp/pip-build-tracker-xc8j8bdo
2022-09-04T09:09:41,194 Created build tracker: /tmp/pip-build-tracker-xc8j8bdo
2022-09-04T09:09:41,195 Entered build tracker: /tmp/pip-build-tracker-xc8j8bdo
2022-09-04T09:09:41,196 Created temporary directory: /tmp/pip-wheel-gls5w8bm
2022-09-04T09:09:41,260 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-09-04T09:09:41,268 2 location(s) to search for versions of stereopy:
2022-09-04T09:09:41,268 * https://pypi.org/simple/stereopy/
2022-09-04T09:09:41,268 * https://www.piwheels.org/simple/stereopy/
2022-09-04T09:09:41,269 Fetching project page and analyzing links: https://pypi.org/simple/stereopy/
2022-09-04T09:09:41,270 Getting page https://pypi.org/simple/stereopy/
2022-09-04T09:09:41,274 Found index url https://pypi.org/simple
2022-09-04T09:09:41,471   Found link https://files.pythonhosted.org/packages/ba/e8/211af80a80404175bc1fd16031e19187a8f9f30bbbf83ef798b805bcbfa8/stereopy-0.1.tar.gz#sha256=618b0c895b568f307841c4b6e95448eb73cc56ad5df3b5aff48261dc8a4eb24b (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1
2022-09-04T09:09:41,473   Found link https://files.pythonhosted.org/packages/8f/b9/c6937d46ebf500f64995f52f08cedcb7da142757c370a71646baf6aff8d4/stereopy-0.1.9.tar.gz#sha256=bbc2f792b3615175ceb42333f8d781a4b15ec9d090980da088bbbc757d4cb154 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.1.9
2022-09-04T09:09:41,474   Found link https://files.pythonhosted.org/packages/54/d5/44997684dbd629b1d1b6456fd36c6c8a469ef33fd42840b3610b3cc130ea/stereopy-0.2.0.tar.gz#sha256=17d9332696faf468d354a87d2ba78027fc3ebd023dcba9f1ebd0c9cff418e99e (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.2.0
2022-09-04T09:09:41,476   Found link https://files.pythonhosted.org/packages/16/63/f1b3f6cc029841596d2ab044092e8f272e68fb17590c72a6acb49fd9522f/stereopy-0.2.1.tar.gz#sha256=0a085a665f59cb2580b0f89333ca29a4d8cd27e26b9f945b683e5c52bb3a04d3 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.6), version: 0.2.1
2022-09-04T09:09:41,477   Found link https://files.pythonhosted.org/packages/e4/e7/1941f9a5646ce28f1a3ca8112eb6b1c243a296e215de176a94a2e626c608/stereopy-0.2.1.1.tar.gz#sha256=c5a2e2d8cd98e0ebbd928642c4c85c8dfe223b6e26ccb85bd6675bf206353a32 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.2.1.1
2022-09-04T09:09:41,479   Found link https://files.pythonhosted.org/packages/6c/76/6e35ca9b3c9d09da60e3891d6c7bcfe973d1ad9630e8ab44098440f27f2c/stereopy-0.2.2.tar.gz#sha256=607bb675a3babd9a292e25ebc8025e8e8d376d59ab935e9daed404fbff36f801 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.2.2
2022-09-04T09:09:41,480   Found link https://files.pythonhosted.org/packages/fa/b5/2c2344ba53f0de81fc4a386fd8c507967fd63d3e44021535488467182c1c/stereopy-0.2.3.tar.gz#sha256=0cf8fc82e9e41f1d0257126f08145200b4111720baad700b0c16a2f07e3880c6 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.2.3
2022-09-04T09:09:41,481   Found link https://files.pythonhosted.org/packages/a9/5e/02cc76bd28abf7219cc546cda064f4ec21c92b90bb519e618d16c1b2197f/stereopy-0.2.4.tar.gz#sha256=29962ff71a199b99c3516562dbb798c0ed30ff2e077d5010cbdf8b6928bd17b0 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.2.4
2022-09-04T09:09:41,482   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/56/fc/7f20b2c01dc17f6d9b850d6a8c02ce9095bbad5365142bf7ff8ec88792d4/stereopy-0.3.0-py3.7.egg#sha256=2953ed5dd968e64eba0ab15d496c2a9015252ba029d8c8444ffbafb0d499071b (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,483   Found link https://files.pythonhosted.org/packages/35/8d/9cb2ea6c8b59d7714148028ff88e8cfe91ea9e3a10d4a8e7292f3aae309d/stereopy-0.3.0.tar.gz#sha256=3bdd839de4886ff5f7b8251a00b1a763a66a5473e2fe6ec34cc4d2a604132abb (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.3.0
2022-09-04T09:09:41,484   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/cc/10/58d292a4ac53009f0d962ed34516a21f9736f6c96a68ae183412a3160b9b/stereopy-0.3.1-py3.7.egg#sha256=c0241685863ab325fa51f816372adb16d0da7a88582e44f9f006ce565a89f673 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,485   Found link https://files.pythonhosted.org/packages/8b/d2/5decdd8b69540c81d8a0e488bc44404a04bc3a32399d5b072a50f6237af6/stereopy-0.3.1.tar.gz#sha256=9704e0b1b6e75f63a1456298f76ae4ba36793497b5eb84d6db2f2ae5390a000f (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.3.1
2022-09-04T09:09:41,486   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/7b/95/e153f701ca2de58cc86c3e6ad8432119bc39eb108b4ece7b6627e6f81bc6/stereopy-0.4.0-py3.8.egg#sha256=916d37410b3be1c49b54b3a58fb0794c277a389abae326597069c0468a402856 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,487   Found link https://files.pythonhosted.org/packages/17/e1/848749186c0391a01dca51accb267718f502165391bace94388b821785a1/stereopy-0.4.0.tar.gz#sha256=011b3007f1f36c9ee30c40c5fe9cbb98a882be3e78614622d3716d6d0b3253e9 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.4.0
2022-09-04T09:09:41,489   Found link https://files.pythonhosted.org/packages/1c/13/4c9fefb7d33228ef1e56a10864fb49ea451791afb0dcdf6432beb6b79acc/stereopy-0.5.0.tar.gz#sha256=e1d939406ef161146ac3ce886e7b063dfe50cf7fb24d42a5a15e3903380b1440 (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.5.0
2022-09-04T09:09:41,490   Found link https://files.pythonhosted.org/packages/9d/8b/6288e8a6e84f6f769b4c0a6b15e622fc43b90f97cacab5cac03eec37d411/stereopy-0.5.1.tar.gz#sha256=e1245b20d88bdeb428acfa024d8e278dfaf21773a44eeb92f707393864357adc (from https://pypi.org/simple/stereopy/) (requires-python:>=3.7), version: 0.5.1
2022-09-04T09:09:41,491 Fetching project page and analyzing links: https://www.piwheels.org/simple/stereopy/
2022-09-04T09:09:41,492 Getting page https://www.piwheels.org/simple/stereopy/
2022-09-04T09:09:41,494 Found index url https://www.piwheels.org/simple
2022-09-04T09:09:41,714   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.5.0-py3-none-any.whl#sha256=2510badf9c457220f01581a6492981278d20b807758a46a912440ae482354bd0 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,715   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.4.0-py3-none-any.whl#sha256=1d8070e8be8f1f750d8497c9ef431b840146eb8cb0940b46141b19c6062d5bdb (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,715   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.3.1-py3-none-any.whl#sha256=f835bc3f59bc12ed7b96d5c50a54bbedca1f4eddee615a24269dddadcbdc0a2b (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,716   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.3.0-py3-none-any.whl#sha256=0656dab52c5d0c4807a5506ab388950e6bbb87788f5799902aa19249f4b2053c (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,716   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.2.4-py3-none-any.whl#sha256=b78386b89c5ad578686208cee978abbc50c63408f79a3e13825cbb216c1f85e2 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,717   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.2.2-py3-none-any.whl#sha256=cf30abb8d0be555dc5a8b89f25c6cb1d9751b4020397a3eb52f8378549ae6fd9 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,718   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.2.1.1-py3-none-any.whl#sha256=10f5984a2c3aa0f26dd16a87369bebc8274256dd4a44a641f50fa40e72e64d64 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.7)
2022-09-04T09:09:41,718   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.2.1-py3-none-any.whl#sha256=cf71efeac7cafa9bff7c3a22c48c80c49cdd789556030cddb0f42576b578642b (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.6)
2022-09-04T09:09:41,719   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.2.0-py3-none-any.whl#sha256=ae14c63aea986a54218b9fed56b879d0a97082db8a4f6fadc91a319e0ce90c8f (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.6)
2022-09-04T09:09:41,719   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.1.9-py3-none-any.whl#sha256=9786a21d45274a8ed729134a2a5fa7379701020aa314d693fc95f4cca2a91e75 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.6)
2022-09-04T09:09:41,720   Skipping link: No binaries permitted for stereopy: https://www.piwheels.org/simple/stereopy/stereopy-0.1-py3-none-any.whl#sha256=1436faf8dcf176e53adce94e2bc87792de7d4cdaaed317c408128bc9daa5e231 (from https://www.piwheels.org/simple/stereopy/) (requires-python:>=3.6)
2022-09-04T09:09:41,720 Skipping link: not a file: https://www.piwheels.org/simple/stereopy/
2022-09-04T09:09:41,721 Skipping link: not a file: https://pypi.org/simple/stereopy/
2022-09-04T09:09:41,759 Given no hashes to check 1 links for project 'stereopy': discarding no candidates
2022-09-04T09:09:41,791 Collecting stereopy==0.5.1
2022-09-04T09:09:41,796   Created temporary directory: /tmp/pip-unpack-yebqo7ea
2022-09-04T09:09:45,250   Downloading stereopy-0.5.1.tar.gz (79.8 MB)
2022-09-04T09:10:18,998   Added stereopy==0.5.1 from https://files.pythonhosted.org/packages/9d/8b/6288e8a6e84f6f769b4c0a6b15e622fc43b90f97cacab5cac03eec37d411/stereopy-0.5.1.tar.gz#sha256=e1245b20d88bdeb428acfa024d8e278dfaf21773a44eeb92f707393864357adc to build tracker '/tmp/pip-build-tracker-xc8j8bdo'
2022-09-04T09:10:19,005   Running setup.py (path:/tmp/pip-wheel-gls5w8bm/stereopy_ceeba1bebe6f485cab454638d382fe9d/setup.py) egg_info for package stereopy
2022-09-04T09:10:19,006   Created temporary directory: /tmp/pip-pip-egg-info-f1forjcq
2022-09-04T09:10:19,006   Preparing metadata (setup.py): started
2022-09-04T09:10:19,009   Running command python setup.py egg_info
2022-09-04T09:15:06,803   running egg_info
2022-09-04T09:15:06,808   creating /tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info
2022-09-04T09:15:07,651   writing /tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/PKG-INFO
2022-09-04T09:15:08,316   writing dependency_links to /tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/dependency_links.txt
2022-09-04T09:15:11,297   writing requirements to /tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/requires.txt
2022-09-04T09:15:11,893   writing top-level names to /tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/top_level.txt
2022-09-04T09:15:11,896   writing manifest file '/tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/SOURCES.txt'
2022-09-04T09:15:13,605   /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
2022-09-04T09:15:13,605     SetuptoolsDeprecationWarning,
2022-09-04T09:15:13,606   listing git files failed - pretending there aren't any
2022-09-04T09:15:13,629   reading manifest file '/tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/SOURCES.txt'
2022-09-04T09:15:13,633   adding license file 'LICENSE'
2022-09-04T09:15:13,648   writing manifest file '/tmp/pip-pip-egg-info-f1forjcq/stereopy.egg-info/SOURCES.txt'
2022-09-04T09:15:13,919   Preparing metadata (setup.py): finished with status 'done'
2022-09-04T09:15:13,930   Source in /tmp/pip-wheel-gls5w8bm/stereopy_ceeba1bebe6f485cab454638d382fe9d has version 0.5.1, which satisfies requirement stereopy==0.5.1 from https://files.pythonhosted.org/packages/9d/8b/6288e8a6e84f6f769b4c0a6b15e622fc43b90f97cacab5cac03eec37d411/stereopy-0.5.1.tar.gz#sha256=e1245b20d88bdeb428acfa024d8e278dfaf21773a44eeb92f707393864357adc
2022-09-04T09:15:13,932   Removed stereopy==0.5.1 from https://files.pythonhosted.org/packages/9d/8b/6288e8a6e84f6f769b4c0a6b15e622fc43b90f97cacab5cac03eec37d411/stereopy-0.5.1.tar.gz#sha256=e1245b20d88bdeb428acfa024d8e278dfaf21773a44eeb92f707393864357adc from build tracker '/tmp/pip-build-tracker-xc8j8bdo'
2022-09-04T09:15:13,945 Created temporary directory: /tmp/pip-unpack-hsmw6z8d
2022-09-04T09:15:13,946 Building wheels for collected packages: stereopy
2022-09-04T09:15:13,955   Created temporary directory: /tmp/pip-wheel-3h8j49zk
2022-09-04T09:15:13,956   Building wheel for stereopy (setup.py): started
2022-09-04T09:15:13,958   Destination directory: /tmp/pip-wheel-3h8j49zk
2022-09-04T09:15:13,959   Running command python setup.py bdist_wheel
2022-09-04T09:15:17,370   /usr/local/lib/python3.7/dist-packages/setuptools/installer.py:30: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
2022-09-04T09:15:17,371     SetuptoolsDeprecationWarning,
2022-09-04T09:15:39,202   running bdist_wheel
2022-09-04T09:15:39,944   running build
2022-09-04T09:15:39,945   running build_py
2022-09-04T09:15:40,798   creating build
2022-09-04T09:15:40,799   creating build/lib
2022-09-04T09:15:40,800   creating build/lib/stereo
2022-09-04T09:15:40,802   copying stereo/__init__.py -> build/lib/stereo
2022-09-04T09:15:40,806   copying stereo/config.py -> build/lib/stereo
2022-09-04T09:15:40,810   copying stereo/log_manager.py -> build/lib/stereo
2022-09-04T09:15:40,817   creating build/lib/stereo/tools
2022-09-04T09:15:40,818   copying stereo/tools/find_markers.py -> build/lib/stereo/tools
2022-09-04T09:15:40,823   copying stereo/tools/__init__.py -> build/lib/stereo/tools
2022-09-04T09:15:40,826   copying stereo/tools/dim_reduce.py -> build/lib/stereo/tools
2022-09-04T09:15:40,830   copying stereo/tools/highly_variable_genes.py -> build/lib/stereo/tools
2022-09-04T09:15:40,835   copying stereo/tools/LR_interaction.py -> build/lib/stereo/tools
2022-09-04T09:15:40,840   copying stereo/tools/cell_correct.py -> build/lib/stereo/tools
2022-09-04T09:15:40,844   copying stereo/tools/spatial_lag.py -> build/lib/stereo/tools
2022-09-04T09:15:40,848   copying stereo/tools/clustering.py -> build/lib/stereo/tools
2022-09-04T09:15:40,853   copying stereo/tools/cell_segment.py -> build/lib/stereo/tools
2022-09-04T09:15:40,856   copying stereo/tools/spatial_pattern_score.py -> build/lib/stereo/tools
2022-09-04T09:15:40,860   copying stereo/tools/tissue_extraction.py -> build/lib/stereo/tools
2022-09-04T09:15:40,863   copying stereo/tools/cell_type_anno.py -> build/lib/stereo/tools
2022-09-04T09:15:40,868   copying stereo/tools/cell_cut.py -> build/lib/stereo/tools
2022-09-04T09:15:40,872   copying stereo/tools/boundary.py -> build/lib/stereo/tools
2022-09-04T09:15:40,876   copying stereo/tools/cluster.py -> build/lib/stereo/tools
2022-09-04T09:15:40,883   creating build/lib/stereo/algorithm
2022-09-04T09:15:40,884   copying stereo/algorithm/__init__.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,888   copying stereo/algorithm/dim_reduce.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,892   copying stereo/algorithm/gaussian_smooth.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,895   copying stereo/algorithm/mannwhitneyu.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,899   copying stereo/algorithm/_louvain.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,903   copying stereo/algorithm/highly_variable_genes.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,907   copying stereo/algorithm/spatial_hotspot.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,911   copying stereo/algorithm/statistics.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,914   copying stereo/algorithm/phenograph.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,917   copying stereo/algorithm/normalization.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,921   copying stereo/algorithm/cell_correction_fast.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,925   copying stereo/algorithm/spatial_pattern_score.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,928   copying stereo/algorithm/scale.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,932   copying stereo/algorithm/neighbors.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,936   copying stereo/algorithm/cell_correction.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,940   copying stereo/algorithm/leiden.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,944   copying stereo/algorithm/scenic.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,947   copying stereo/algorithm/umap.py -> build/lib/stereo/algorithm
2022-09-04T09:15:40,952   creating build/lib/stereo/plots
2022-09-04T09:15:40,954   copying stereo/plots/__init__.py -> build/lib/stereo/plots
2022-09-04T09:15:40,957   copying stereo/plots/marker_genes.py -> build/lib/stereo/plots
2022-09-04T09:15:40,962   copying stereo/plots/plot_collection.py -> build/lib/stereo/plots
2022-09-04T09:15:40,966   copying stereo/plots/plot_cells.py -> build/lib/stereo/plots
2022-09-04T09:15:40,971   copying stereo/plots/scatter.py -> build/lib/stereo/plots
2022-09-04T09:15:40,976   copying stereo/plots/violin.py -> build/lib/stereo/plots
2022-09-04T09:15:40,980   creating build/lib/stereo/image
2022-09-04T09:15:40,981   copying stereo/image/__init__.py -> build/lib/stereo/image
2022-09-04T09:15:40,985   copying stereo/image/pyramid.py -> build/lib/stereo/image
2022-09-04T09:15:40,991   creating build/lib/stereo/utils
2022-09-04T09:15:40,992   copying stereo/utils/hvg_utils.py -> build/lib/stereo/utils
2022-09-04T09:15:40,997   copying stereo/utils/__init__.py -> build/lib/stereo/utils
2022-09-04T09:15:41,000   copying stereo/utils/time_consume.py -> build/lib/stereo/utils
2022-09-04T09:15:41,003   copying stereo/utils/correlation.py -> build/lib/stereo/utils
2022-09-04T09:15:41,006   copying stereo/utils/spmatrix_helper.py -> build/lib/stereo/utils
2022-09-04T09:15:41,010   copying stereo/utils/data_helper.py -> build/lib/stereo/utils
2022-09-04T09:15:41,015   creating build/lib/stereo/core
2022-09-04T09:15:41,016   copying stereo/core/__init__.py -> build/lib/stereo/core
2022-09-04T09:15:41,020   copying stereo/core/gene.py -> build/lib/stereo/core
2022-09-04T09:15:41,023   copying stereo/core/stereo_exp_data.py -> build/lib/stereo/core
2022-09-04T09:15:41,027   copying stereo/core/stereo_result.py -> build/lib/stereo/core
2022-09-04T09:15:41,031   copying stereo/core/st_pipeline.py -> build/lib/stereo/core
2022-09-04T09:15:41,037   copying stereo/core/tool_base.py -> build/lib/stereo/core
2022-09-04T09:15:41,041   copying stereo/core/data.py -> build/lib/stereo/core
2022-09-04T09:15:41,045   copying stereo/core/cell.py -> build/lib/stereo/core
2022-09-04T09:15:41,050   creating build/lib/stereo/io
2022-09-04T09:15:41,051   copying stereo/io/__init__.py -> build/lib/stereo/io
2022-09-04T09:15:41,055   copying stereo/io/h5ad.py -> build/lib/stereo/io
2022-09-04T09:15:41,059   copying stereo/io/writer.py -> build/lib/stereo/io
2022-09-04T09:15:41,064   copying stereo/io/reader.py -> build/lib/stereo/io
2022-09-04T09:15:41,069   copying stereo/io/gef.py -> build/lib/stereo/io
2022-09-04T09:15:41,075   creating build/lib/stereo/preprocess
2022-09-04T09:15:41,076   copying stereo/preprocess/__init__.py -> build/lib/stereo/preprocess
2022-09-04T09:15:41,080   copying stereo/preprocess/normalize.py -> build/lib/stereo/preprocess
2022-09-04T09:15:41,083   copying stereo/preprocess/sc_transform.py -> build/lib/stereo/preprocess
2022-09-04T09:15:41,086   copying stereo/preprocess/filter.py -> build/lib/stereo/preprocess
2022-09-04T09:15:41,090   copying stereo/preprocess/qc.py -> build/lib/stereo/preprocess
2022-09-04T09:15:41,095   creating build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,097   copying stereo/algorithm/pysctransform/__init__.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,101   copying stereo/algorithm/pysctransform/fit.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,105   copying stereo/algorithm/pysctransform/pysctransform.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,110   copying stereo/algorithm/pysctransform/plotting.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,114   copying stereo/algorithm/pysctransform/jax_bfgs.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,118   copying stereo/algorithm/pysctransform/r_bw.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,121   copying stereo/algorithm/pysctransform/fit_glmgp.py -> build/lib/stereo/algorithm/pysctransform
2022-09-04T09:15:41,126   creating build/lib/stereo/plots/interact_plot
2022-09-04T09:15:41,127   copying stereo/plots/interact_plot/__init__.py -> build/lib/stereo/plots/interact_plot
2022-09-04T09:15:41,131   copying stereo/plots/interact_plot/poly_selection.py -> build/lib/stereo/plots/interact_plot
2022-09-04T09:15:41,135   copying stereo/plots/interact_plot/spatial_cluster.py -> build/lib/stereo/plots/interact_plot
2022-09-04T09:15:41,138   copying stereo/plots/interact_plot/interactive_scatter.py -> build/lib/stereo/plots/interact_plot
2022-09-04T09:15:41,143   creating build/lib/stereo/plots/_plot_basic
2022-09-04T09:15:41,145   copying stereo/plots/_plot_basic/__init__.py -> build/lib/stereo/plots/_plot_basic
2022-09-04T09:15:41,910   copying stereo/plots/_plot_basic/heatmap_plt.py -> build/lib/stereo/plots/_plot_basic
2022-09-04T09:15:41,922   copying stereo/plots/_plot_basic/get_stereo_data.py -> build/lib/stereo/plots/_plot_basic
2022-09-04T09:15:41,927   creating build/lib/stereo/image/segmentation_deepcell
2022-09-04T09:15:41,929   copying stereo/image/segmentation_deepcell/__init__.py -> build/lib/stereo/image/segmentation_deepcell
2022-09-04T09:15:41,932   copying stereo/image/segmentation_deepcell/segment.py -> build/lib/stereo/image/segmentation_deepcell
2022-09-04T09:15:41,937   creating build/lib/stereo/image/segmentation
2022-09-04T09:15:41,939   copying stereo/image/segmentation/__init__.py -> build/lib/stereo/image/segmentation
2022-09-04T09:15:41,942   copying stereo/image/segmentation/segment.py -> build/lib/stereo/image/segmentation
2022-09-04T09:15:41,947   creating build/lib/stereo/image/x2tif
2022-09-04T09:15:41,948   copying stereo/image/x2tif/__init__.py -> build/lib/stereo/image/x2tif
2022-09-04T09:15:41,952   copying stereo/image/x2tif/x2tif.py -> build/lib/stereo/image/x2tif
2022-09-04T09:15:41,957   creating build/lib/stereo/image/tissue_cut
2022-09-04T09:15:41,958   copying stereo/image/tissue_cut/__init__.py -> build/lib/stereo/image/tissue_cut
2022-09-04T09:15:41,962   copying stereo/image/tissue_cut/pipeline.py -> build/lib/stereo/image/tissue_cut
2022-09-04T09:15:41,969   creating build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,970   copying stereo/image/segmentation_deepcell/seg_utils/tissue_seg.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,974   copying stereo/image/segmentation_deepcell/seg_utils/cell_seg_pipeline.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,978   copying stereo/image/segmentation_deepcell/seg_utils/__init__.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,981   copying stereo/image/segmentation_deepcell/seg_utils/utils.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,986   copying stereo/image/segmentation_deepcell/seg_utils/grade.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,990   copying stereo/image/segmentation_deepcell/seg_utils/cell_infer.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,994   copying stereo/image/segmentation_deepcell/seg_utils/tissue_seg_pipeline.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:41,998   copying stereo/image/segmentation_deepcell/seg_utils/image.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:42,001   copying stereo/image/segmentation_deepcell/seg_utils/find_maxima.py -> build/lib/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:42,007   creating build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,009   copying stereo/image/segmentation/seg_utils/tissue_seg.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,013   copying stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,017   copying stereo/image/segmentation/seg_utils/__init__.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,019   copying stereo/image/segmentation/seg_utils/utils.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,024   copying stereo/image/segmentation/seg_utils/grade.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,029   copying stereo/image/segmentation/seg_utils/cell_infer.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,034   copying stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,038   copying stereo/image/segmentation/seg_utils/resnet_unet.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,043   copying stereo/image/segmentation/seg_utils/image.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,047   copying stereo/image/segmentation/seg_utils/find_maxima.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,052   copying stereo/image/segmentation/seg_utils/dataset.py -> build/lib/stereo/image/segmentation/seg_utils
2022-09-04T09:15:42,057   creating build/lib/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:42,059   copying stereo/image/segmentation/seg_utils/models/epsanet.py -> build/lib/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:42,065   copying stereo/image/segmentation/seg_utils/models/__init__.py -> build/lib/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:42,069   copying stereo/image/segmentation/seg_utils/models/SE_weight_module.py -> build/lib/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:42,074   creating build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,076   copying stereo/image/tissue_cut/tissue_cut_utils/__init__.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,080   copying stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_utils.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,084   copying stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,089   copying stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_model.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,093   copying stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_uity.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,097   copying stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_net.py -> build/lib/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:42,102   running egg_info
2022-09-04T09:15:43,795   writing stereopy.egg-info/PKG-INFO
2022-09-04T09:15:44,396   writing dependency_links to stereopy.egg-info/dependency_links.txt
2022-09-04T09:15:47,396   writing requirements to stereopy.egg-info/requires.txt
2022-09-04T09:15:47,999   writing top-level names to stereopy.egg-info/top_level.txt
2022-09-04T09:15:48,562   listing git files failed - pretending there aren't any
2022-09-04T09:15:48,579   reading manifest file 'stereopy.egg-info/SOURCES.txt'
2022-09-04T09:15:48,616   adding license file 'LICENSE'
2022-09-04T09:15:48,643   writing manifest file 'stereopy.egg-info/SOURCES.txt'
2022-09-04T09:15:49,545   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-09-04T09:15:49,546     setuptools.SetuptoolsDeprecationWarning,
2022-09-04T09:15:50,395   installing to build/bdist.linux-armv7l/wheel
2022-09-04T09:15:50,395   running install
2022-09-04T09:15:50,458   running install_lib
2022-09-04T09:15:51,307   creating build/bdist.linux-armv7l
2022-09-04T09:15:51,307   creating build/bdist.linux-armv7l/wheel
2022-09-04T09:15:51,311   creating build/bdist.linux-armv7l/wheel/stereo
2022-09-04T09:15:51,314   creating build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,315   copying build/lib/stereo/tools/find_markers.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,320   copying build/lib/stereo/tools/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,323   copying build/lib/stereo/tools/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,327   copying build/lib/stereo/tools/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,331   copying build/lib/stereo/tools/LR_interaction.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,335   copying build/lib/stereo/tools/cell_correct.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,339   copying build/lib/stereo/tools/spatial_lag.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,343   copying build/lib/stereo/tools/clustering.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,347   copying build/lib/stereo/tools/cell_segment.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,350   copying build/lib/stereo/tools/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,353   copying build/lib/stereo/tools/tissue_extraction.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,357   copying build/lib/stereo/tools/cell_type_anno.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,361   copying build/lib/stereo/tools/cell_cut.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,364   copying build/lib/stereo/tools/boundary.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,368   copying build/lib/stereo/tools/cluster.py -> build/bdist.linux-armv7l/wheel/stereo/tools
2022-09-04T09:15:51,372   copying build/lib/stereo/__init__.py -> build/bdist.linux-armv7l/wheel/stereo
2022-09-04T09:15:51,375   copying build/lib/stereo/config.py -> build/bdist.linux-armv7l/wheel/stereo
2022-09-04T09:15:51,380   creating build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,382   copying build/lib/stereo/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,385   copying build/lib/stereo/algorithm/dim_reduce.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,388   copying build/lib/stereo/algorithm/gaussian_smooth.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,391   copying build/lib/stereo/algorithm/mannwhitneyu.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,395   copying build/lib/stereo/algorithm/_louvain.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,399   copying build/lib/stereo/algorithm/highly_variable_genes.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,403   copying build/lib/stereo/algorithm/spatial_hotspot.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,406   copying build/lib/stereo/algorithm/statistics.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,411   creating build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,412   copying build/lib/stereo/algorithm/pysctransform/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,415   copying build/lib/stereo/algorithm/pysctransform/fit.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,419   copying build/lib/stereo/algorithm/pysctransform/pysctransform.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,424   copying build/lib/stereo/algorithm/pysctransform/plotting.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,428   copying build/lib/stereo/algorithm/pysctransform/jax_bfgs.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,431   copying build/lib/stereo/algorithm/pysctransform/r_bw.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,434   copying build/lib/stereo/algorithm/pysctransform/fit_glmgp.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm/pysctransform
2022-09-04T09:15:51,438   copying build/lib/stereo/algorithm/phenograph.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,441   copying build/lib/stereo/algorithm/normalization.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,444   copying build/lib/stereo/algorithm/cell_correction_fast.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,448   copying build/lib/stereo/algorithm/spatial_pattern_score.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,452   copying build/lib/stereo/algorithm/scale.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,455   copying build/lib/stereo/algorithm/neighbors.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,459   copying build/lib/stereo/algorithm/cell_correction.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,463   copying build/lib/stereo/algorithm/leiden.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,467   copying build/lib/stereo/algorithm/scenic.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,471   copying build/lib/stereo/algorithm/umap.py -> build/bdist.linux-armv7l/wheel/stereo/algorithm
2022-09-04T09:15:51,476   creating build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,477   copying build/lib/stereo/plots/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,480   copying build/lib/stereo/plots/marker_genes.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,484   copying build/lib/stereo/plots/plot_collection.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,489   copying build/lib/stereo/plots/plot_cells.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,494   creating build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2022-09-04T09:15:51,495   copying build/lib/stereo/plots/interact_plot/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2022-09-04T09:15:51,499   copying build/lib/stereo/plots/interact_plot/poly_selection.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2022-09-04T09:15:51,503   copying build/lib/stereo/plots/interact_plot/spatial_cluster.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2022-09-04T09:15:51,506   copying build/lib/stereo/plots/interact_plot/interactive_scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots/interact_plot
2022-09-04T09:15:51,510   copying build/lib/stereo/plots/scatter.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,516   creating build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2022-09-04T09:15:51,518   copying build/lib/stereo/plots/_plot_basic/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2022-09-04T09:15:51,522   copying build/lib/stereo/plots/_plot_basic/heatmap_plt.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2022-09-04T09:15:51,527   copying build/lib/stereo/plots/_plot_basic/get_stereo_data.py -> build/bdist.linux-armv7l/wheel/stereo/plots/_plot_basic
2022-09-04T09:15:51,531   copying build/lib/stereo/plots/violin.py -> build/bdist.linux-armv7l/wheel/stereo/plots
2022-09-04T09:15:51,535   copying build/lib/stereo/log_manager.py -> build/bdist.linux-armv7l/wheel/stereo
2022-09-04T09:15:51,540   creating build/bdist.linux-armv7l/wheel/stereo/image
2022-09-04T09:15:51,542   copying build/lib/stereo/image/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image
2022-09-04T09:15:51,546   copying build/lib/stereo/image/pyramid.py -> build/bdist.linux-armv7l/wheel/stereo/image
2022-09-04T09:15:51,552   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell
2022-09-04T09:15:51,554   copying build/lib/stereo/image/segmentation_deepcell/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell
2022-09-04T09:15:51,558   copying build/lib/stereo/image/segmentation_deepcell/segment.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell
2022-09-04T09:15:51,563   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,565   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/tissue_seg.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,570   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/cell_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,575   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,578   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/utils.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,584   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/grade.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,588   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/cell_infer.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,594   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/tissue_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,597   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/image.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,601   copying build/lib/stereo/image/segmentation_deepcell/seg_utils/find_maxima.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation_deepcell/seg_utils
2022-09-04T09:15:51,607   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2022-09-04T09:15:51,610   copying build/lib/stereo/image/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2022-09-04T09:15:51,613   copying build/lib/stereo/image/segmentation/segment.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation
2022-09-04T09:15:51,618   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,619   copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,623   copying build/lib/stereo/image/segmentation/seg_utils/cell_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,627   copying build/lib/stereo/image/segmentation/seg_utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,630   copying build/lib/stereo/image/segmentation/seg_utils/utils.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,635   copying build/lib/stereo/image/segmentation/seg_utils/grade.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,639   copying build/lib/stereo/image/segmentation/seg_utils/cell_infer.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,643   copying build/lib/stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,647   creating build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:51,649   copying build/lib/stereo/image/segmentation/seg_utils/models/epsanet.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:51,654   copying build/lib/stereo/image/segmentation/seg_utils/models/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:51,668   copying build/lib/stereo/image/segmentation/seg_utils/models/SE_weight_module.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils/models
2022-09-04T09:15:51,672   copying build/lib/stereo/image/segmentation/seg_utils/resnet_unet.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,676   copying build/lib/stereo/image/segmentation/seg_utils/image.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,679   copying build/lib/stereo/image/segmentation/seg_utils/find_maxima.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,683   copying build/lib/stereo/image/segmentation/seg_utils/dataset.py -> build/bdist.linux-armv7l/wheel/stereo/image/segmentation/seg_utils
2022-09-04T09:15:51,687   creating build/bdist.linux-armv7l/wheel/stereo/image/x2tif
2022-09-04T09:15:51,689   copying build/lib/stereo/image/x2tif/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/x2tif
2022-09-04T09:15:51,692   copying build/lib/stereo/image/x2tif/x2tif.py -> build/bdist.linux-armv7l/wheel/stereo/image/x2tif
2022-09-04T09:15:51,697   creating build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut
2022-09-04T09:15:51,699   copying build/lib/stereo/image/tissue_cut/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut
2022-09-04T09:15:51,703   creating build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,704   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,708   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_utils.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,711   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,715   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_model.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,719   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_uity.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,722   copying build/lib/stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_net.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut/tissue_cut_utils
2022-09-04T09:15:51,727   copying build/lib/stereo/image/tissue_cut/pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/image/tissue_cut
2022-09-04T09:15:51,732   creating build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,733   copying build/lib/stereo/utils/hvg_utils.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,737   copying build/lib/stereo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,741   copying build/lib/stereo/utils/time_consume.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,744   copying build/lib/stereo/utils/correlation.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,747   copying build/lib/stereo/utils/spmatrix_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,750   copying build/lib/stereo/utils/data_helper.py -> build/bdist.linux-armv7l/wheel/stereo/utils
2022-09-04T09:15:51,754   creating build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,756   copying build/lib/stereo/core/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,759   copying build/lib/stereo/core/gene.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,762   copying build/lib/stereo/core/stereo_exp_data.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,766   copying build/lib/stereo/core/stereo_result.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,770   copying build/lib/stereo/core/st_pipeline.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,775   copying build/lib/stereo/core/tool_base.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,779   copying build/lib/stereo/core/data.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,782   copying build/lib/stereo/core/cell.py -> build/bdist.linux-armv7l/wheel/stereo/core
2022-09-04T09:15:51,786   creating build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,788   copying build/lib/stereo/io/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,792   copying build/lib/stereo/io/h5ad.py -> build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,796   copying build/lib/stereo/io/writer.py -> build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,800   copying build/lib/stereo/io/reader.py -> build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,805   copying build/lib/stereo/io/gef.py -> build/bdist.linux-armv7l/wheel/stereo/io
2022-09-04T09:15:51,810   creating build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,811   copying build/lib/stereo/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,815   copying build/lib/stereo/preprocess/normalize.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,818   copying build/lib/stereo/preprocess/sc_transform.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,821   copying build/lib/stereo/preprocess/filter.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,825   copying build/lib/stereo/preprocess/qc.py -> build/bdist.linux-armv7l/wheel/stereo/preprocess
2022-09-04T09:15:51,828   running install_egg_info
2022-09-04T09:15:52,677   Copying stereopy.egg-info to build/bdist.linux-armv7l/wheel/stereopy-0.5.1-py3.7.egg-info
2022-09-04T09:15:52,697   running install_scripts
2022-09-04T09:15:53,141   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-09-04T09:15:53,149   creating build/bdist.linux-armv7l/wheel/stereopy-0.5.1.dist-info/WHEEL
2022-09-04T09:15:53,153   creating '/tmp/pip-wheel-3h8j49zk/stereopy-0.5.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-09-04T09:15:53,158   adding 'stereo/__init__.py'
2022-09-04T09:15:53,161   adding 'stereo/config.py'
2022-09-04T09:15:53,163   adding 'stereo/log_manager.py'
2022-09-04T09:15:53,167   adding 'stereo/algorithm/__init__.py'
2022-09-04T09:15:53,170   adding 'stereo/algorithm/_louvain.py'
2022-09-04T09:15:53,174   adding 'stereo/algorithm/cell_correction.py'
2022-09-04T09:15:53,177   adding 'stereo/algorithm/cell_correction_fast.py'
2022-09-04T09:15:53,180   adding 'stereo/algorithm/dim_reduce.py'
2022-09-04T09:15:53,183   adding 'stereo/algorithm/gaussian_smooth.py'
2022-09-04T09:15:53,186   adding 'stereo/algorithm/highly_variable_genes.py'
2022-09-04T09:15:53,189   adding 'stereo/algorithm/leiden.py'
2022-09-04T09:15:53,193   adding 'stereo/algorithm/mannwhitneyu.py'
2022-09-04T09:15:53,198   adding 'stereo/algorithm/neighbors.py'
2022-09-04T09:15:53,201   adding 'stereo/algorithm/normalization.py'
2022-09-04T09:15:53,203   adding 'stereo/algorithm/phenograph.py'
2022-09-04T09:15:53,206   adding 'stereo/algorithm/scale.py'
2022-09-04T09:15:53,208   adding 'stereo/algorithm/scenic.py'
2022-09-04T09:15:53,211   adding 'stereo/algorithm/spatial_hotspot.py'
2022-09-04T09:15:53,213   adding 'stereo/algorithm/spatial_pattern_score.py'
2022-09-04T09:15:53,216   adding 'stereo/algorithm/statistics.py'
2022-09-04T09:15:53,219   adding 'stereo/algorithm/umap.py'
2022-09-04T09:15:53,222   adding 'stereo/algorithm/pysctransform/__init__.py'
2022-09-04T09:15:53,225   adding 'stereo/algorithm/pysctransform/fit.py'
2022-09-04T09:15:53,227   adding 'stereo/algorithm/pysctransform/fit_glmgp.py'
2022-09-04T09:15:53,230   adding 'stereo/algorithm/pysctransform/jax_bfgs.py'
2022-09-04T09:15:53,233   adding 'stereo/algorithm/pysctransform/plotting.py'
2022-09-04T09:15:53,241   adding 'stereo/algorithm/pysctransform/pysctransform.py'
2022-09-04T09:15:53,245   adding 'stereo/algorithm/pysctransform/r_bw.py'
2022-09-04T09:15:53,248   adding 'stereo/core/__init__.py'
2022-09-04T09:15:53,250   adding 'stereo/core/cell.py'
2022-09-04T09:15:53,253   adding 'stereo/core/data.py'
2022-09-04T09:15:53,255   adding 'stereo/core/gene.py'
2022-09-04T09:15:53,269   adding 'stereo/core/st_pipeline.py'
2022-09-04T09:15:53,273   adding 'stereo/core/stereo_exp_data.py'
2022-09-04T09:15:53,276   adding 'stereo/core/stereo_result.py'
2022-09-04T09:15:53,279   adding 'stereo/core/tool_base.py'
2022-09-04T09:15:53,282   adding 'stereo/image/__init__.py'
2022-09-04T09:15:53,284   adding 'stereo/image/pyramid.py'
2022-09-04T09:15:53,288   adding 'stereo/image/segmentation/__init__.py'
2022-09-04T09:15:53,290   adding 'stereo/image/segmentation/segment.py'
2022-09-04T09:15:53,293   adding 'stereo/image/segmentation/seg_utils/__init__.py'
2022-09-04T09:15:53,298   adding 'stereo/image/segmentation/seg_utils/cell_infer.py'
2022-09-04T09:15:53,302   adding 'stereo/image/segmentation/seg_utils/cell_seg_pipeline.py'
2022-09-04T09:15:53,305   adding 'stereo/image/segmentation/seg_utils/dataset.py'
2022-09-04T09:15:53,308   adding 'stereo/image/segmentation/seg_utils/find_maxima.py'
2022-09-04T09:15:53,311   adding 'stereo/image/segmentation/seg_utils/grade.py'
2022-09-04T09:15:53,314   adding 'stereo/image/segmentation/seg_utils/image.py'
2022-09-04T09:15:53,316   adding 'stereo/image/segmentation/seg_utils/resnet_unet.py'
2022-09-04T09:15:53,319   adding 'stereo/image/segmentation/seg_utils/tissue_seg.py'
2022-09-04T09:15:53,322   adding 'stereo/image/segmentation/seg_utils/tissue_seg_pipeline.py'
2022-09-04T09:15:53,328   adding 'stereo/image/segmentation/seg_utils/utils.py'
2022-09-04T09:15:53,332   adding 'stereo/image/segmentation/seg_utils/models/SE_weight_module.py'
2022-09-04T09:15:53,334   adding 'stereo/image/segmentation/seg_utils/models/__init__.py'
2022-09-04T09:15:53,340   adding 'stereo/image/segmentation/seg_utils/models/epsanet.py'
2022-09-04T09:15:53,343   adding 'stereo/image/segmentation_deepcell/__init__.py'
2022-09-04T09:15:53,345   adding 'stereo/image/segmentation_deepcell/segment.py'
2022-09-04T09:15:53,349   adding 'stereo/image/segmentation_deepcell/seg_utils/__init__.py'
2022-09-04T09:15:53,353   adding 'stereo/image/segmentation_deepcell/seg_utils/cell_infer.py'
2022-09-04T09:15:53,357   adding 'stereo/image/segmentation_deepcell/seg_utils/cell_seg_pipeline.py'
2022-09-04T09:15:53,361   adding 'stereo/image/segmentation_deepcell/seg_utils/find_maxima.py'
2022-09-04T09:15:53,364   adding 'stereo/image/segmentation_deepcell/seg_utils/grade.py'
2022-09-04T09:15:53,366   adding 'stereo/image/segmentation_deepcell/seg_utils/image.py'
2022-09-04T09:15:53,369   adding 'stereo/image/segmentation_deepcell/seg_utils/tissue_seg.py'
2022-09-04T09:15:53,372   adding 'stereo/image/segmentation_deepcell/seg_utils/tissue_seg_pipeline.py'
2022-09-04T09:15:53,378   adding 'stereo/image/segmentation_deepcell/seg_utils/utils.py'
2022-09-04T09:15:53,382   adding 'stereo/image/tissue_cut/__init__.py'
2022-09-04T09:15:53,386   adding 'stereo/image/tissue_cut/pipeline.py'
2022-09-04T09:15:53,390   adding 'stereo/image/tissue_cut/tissue_cut_utils/__init__.py'
2022-09-04T09:15:53,393   adding 'stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu.py'
2022-09-04T09:15:53,396   adding 'stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_model.py'
2022-09-04T09:15:53,398   adding 'stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_bcdu_uity.py'
2022-09-04T09:15:53,402   adding 'stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_net.py'
2022-09-04T09:15:53,405   adding 'stereo/image/tissue_cut/tissue_cut_utils/tissue_seg_utils.py'
2022-09-04T09:15:53,408   adding 'stereo/image/x2tif/__init__.py'
2022-09-04T09:15:53,411   adding 'stereo/image/x2tif/x2tif.py'
2022-09-04T09:15:53,414   adding 'stereo/io/__init__.py'
2022-09-04T09:15:53,417   adding 'stereo/io/gef.py'
2022-09-04T09:15:53,421   adding 'stereo/io/h5ad.py'
2022-09-04T09:15:53,429   adding 'stereo/io/reader.py'
2022-09-04T09:15:53,434   adding 'stereo/io/writer.py'
2022-09-04T09:15:53,437   adding 'stereo/plots/__init__.py'
2022-09-04T09:15:53,441   adding 'stereo/plots/marker_genes.py'
2022-09-04T09:15:53,445   adding 'stereo/plots/plot_cells.py'
2022-09-04T09:15:53,451   adding 'stereo/plots/plot_collection.py'
2022-09-04T09:15:53,455   adding 'stereo/plots/scatter.py'
2022-09-04T09:15:53,458   adding 'stereo/plots/violin.py'
2022-09-04T09:15:53,461   adding 'stereo/plots/_plot_basic/__init__.py'
2022-09-04T09:15:53,463   adding 'stereo/plots/_plot_basic/get_stereo_data.py'
2022-09-04T09:15:53,467   adding 'stereo/plots/_plot_basic/heatmap_plt.py'
2022-09-04T09:15:53,470   adding 'stereo/plots/interact_plot/__init__.py'
2022-09-04T09:15:53,474   adding 'stereo/plots/interact_plot/interactive_scatter.py'
2022-09-04T09:15:53,477   adding 'stereo/plots/interact_plot/poly_selection.py'
2022-09-04T09:15:53,480   adding 'stereo/plots/interact_plot/spatial_cluster.py'
2022-09-04T09:15:53,483   adding 'stereo/preprocess/__init__.py'
2022-09-04T09:15:53,486   adding 'stereo/preprocess/filter.py'
2022-09-04T09:15:53,488   adding 'stereo/preprocess/normalize.py'
2022-09-04T09:15:53,490   adding 'stereo/preprocess/qc.py'
2022-09-04T09:15:53,493   adding 'stereo/preprocess/sc_transform.py'
2022-09-04T09:15:53,500   adding 'stereo/tools/LR_interaction.py'
2022-09-04T09:15:53,503   adding 'stereo/tools/__init__.py'
2022-09-04T09:15:53,506   adding 'stereo/tools/boundary.py'
2022-09-04T09:15:53,510   adding 'stereo/tools/cell_correct.py'
2022-09-04T09:15:53,512   adding 'stereo/tools/cell_cut.py'
2022-09-04T09:15:53,514   adding 'stereo/tools/cell_segment.py'
2022-09-04T09:15:53,519   adding 'stereo/tools/cell_type_anno.py'
2022-09-04T09:15:53,522   adding 'stereo/tools/cluster.py'
2022-09-04T09:15:53,526   adding 'stereo/tools/clustering.py'
2022-09-04T09:15:53,529   adding 'stereo/tools/dim_reduce.py'
2022-09-04T09:15:53,532   adding 'stereo/tools/find_markers.py'
2022-09-04T09:15:53,536   adding 'stereo/tools/highly_variable_genes.py'
2022-09-04T09:15:53,539   adding 'stereo/tools/spatial_lag.py'
2022-09-04T09:15:53,541   adding 'stereo/tools/spatial_pattern_score.py'
2022-09-04T09:15:53,543   adding 'stereo/tools/tissue_extraction.py'
2022-09-04T09:15:53,547   adding 'stereo/utils/__init__.py'
2022-09-04T09:15:53,549   adding 'stereo/utils/correlation.py'
2022-09-04T09:15:53,551   adding 'stereo/utils/data_helper.py'
2022-09-04T09:15:53,555   adding 'stereo/utils/hvg_utils.py'
2022-09-04T09:15:53,557   adding 'stereo/utils/spmatrix_helper.py'
2022-09-04T09:15:53,559   adding 'stereo/utils/time_consume.py'
2022-09-04T09:15:53,564   adding 'stereopy-0.5.1.dist-info/LICENSE'
2022-09-04T09:15:53,566   adding 'stereopy-0.5.1.dist-info/METADATA'
2022-09-04T09:15:53,568   adding 'stereopy-0.5.1.dist-info/WHEEL'
2022-09-04T09:15:53,569   adding 'stereopy-0.5.1.dist-info/top_level.txt'
2022-09-04T09:15:53,573   adding 'stereopy-0.5.1.dist-info/RECORD'
2022-09-04T09:15:53,587   removing build/bdist.linux-armv7l/wheel
2022-09-04T09:15:53,934   Building wheel for stereopy (setup.py): finished with status 'done'
2022-09-04T09:15:53,949   Created wheel for stereopy: filename=stereopy-0.5.1-py3-none-any.whl size=230287 sha256=66582ae93ede30fb74e55208b0fc40f927453839c68d9b92eae7d748a7870020
2022-09-04T09:15:53,951   Stored in directory: /tmp/pip-ephem-wheel-cache-_lsbyks2/wheels/88/21/4f/957ac0566c6ccce115e20a9d689f62b8aa541cdb75fb6f9ce2
2022-09-04T09:15:53,985 Successfully built stereopy
2022-09-04T09:15:54,011 Removed build tracker: '/tmp/pip-build-tracker-xc8j8bdo'