2022-09-06T23:03:51,170 Created temporary directory: /tmp/pip-ephem-wheel-cache-k27yiw5h 2022-09-06T23:03:51,175 Created temporary directory: /tmp/pip-build-tracker-56ru9u8i 2022-09-06T23:03:51,176 Initialized build tracking at /tmp/pip-build-tracker-56ru9u8i 2022-09-06T23:03:51,176 Created build tracker: /tmp/pip-build-tracker-56ru9u8i 2022-09-06T23:03:51,177 Entered build tracker: /tmp/pip-build-tracker-56ru9u8i 2022-09-06T23:03:51,178 Created temporary directory: /tmp/pip-wheel-fr95t2p9 2022-09-06T23:03:51,243 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-06T23:03:51,251 2 location(s) to search for versions of pybiopax: 2022-09-06T23:03:51,251 * https://pypi.org/simple/pybiopax/ 2022-09-06T23:03:51,251 * https://www.piwheels.org/simple/pybiopax/ 2022-09-06T23:03:51,252 Fetching project page and analyzing links: https://pypi.org/simple/pybiopax/ 2022-09-06T23:03:51,253 Getting page https://pypi.org/simple/pybiopax/ 2022-09-06T23:03:51,256 Found index url https://pypi.org/simple 2022-09-06T23:03:51,453 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c7/88/02957c31f6e5a3eec52931572d0d8a1a8b79ccba35528ac1d833b67903ed/pybiopax-0.0.1-py3-none-any.whl#sha256=8a2bf2a324a782e0ab5adc5c841746d918d023ba07761260e1208e30af645ca4 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,454 Found link https://files.pythonhosted.org/packages/f9/ce/534092d6719b240fa618bd7f109330476855e0a87579c0629fe65cfc2aa6/pybiopax-0.0.1.tar.gz#sha256=fc555ecb9fe4d94340ba66355704d57b618efed91419d93d79fc65a04dc07103 (from https://pypi.org/simple/pybiopax/), version: 0.0.1 2022-09-06T23:03:51,455 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c9/3f/2fb307100ca7aff02d37593ce39d8020c019d7e4181a7af7677e7c8aa1aa/pybiopax-0.0.2-py3-none-any.whl#sha256=4dbcd1fbf6e4a4924245116039015556a3097d20e355f8a1c9850f20b38c06f0 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,455 Found link https://files.pythonhosted.org/packages/44/0c/377ce9e04018c10bad47ab8d4f08ef903004f5a129861371ad2e953de022/pybiopax-0.0.2.tar.gz#sha256=344c400c88e00cb09289aeeb3333083772cf7650501ac572f2cf9222b95cf872 (from https://pypi.org/simple/pybiopax/), version: 0.0.2 2022-09-06T23:03:51,456 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/e7/d6/85ba100b73150157b9615d373100af76633e7ef0dc1c10069421c959bb42/pybiopax-0.0.3-py3-none-any.whl#sha256=c14fb48e23558e3b38263250295618e7110dd6361c7f87b1f24ab31a406ef094 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,457 Found link https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 (from https://pypi.org/simple/pybiopax/), version: 0.0.3 2022-09-06T23:03:51,457 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/8e/03/6f61cf56f432ccda9265c3b92a6161789c3ca589f551d08fec566a949c1b/pybiopax-0.0.4-py3-none-any.whl#sha256=10696dea703d4572d80423aed60fd0ba8cfdd993fb68a6135324210b21010765 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,458 Found link https://files.pythonhosted.org/packages/22/aa/3ed501611db9593f4cdd277f0041f1c50848b75a039650e532900b89e771/pybiopax-0.0.4.tar.gz#sha256=ccd373d522dabf465bf5a7cb110ca1140d899456696b48f7b28e7caa9c993229 (from https://pypi.org/simple/pybiopax/), version: 0.0.4 2022-09-06T23:03:51,459 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/38/89/cdb7a231907d4c507ff5060fdf83ee83fe4f904870ecb2051ae4746f31b1/pybiopax-0.0.5-py3-none-any.whl#sha256=9fcb5ffb3becec2802bccd592a93820a9c92f9f2520531f40631e05f64afcb4a (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,459 Found link https://files.pythonhosted.org/packages/b9/cb/ed1faa472c0d8519ff31ec978a431fa9d7f4a6539f96b6cd427b7e2213bb/pybiopax-0.0.5.tar.gz#sha256=3a679a41f3f5ada4017dd33e7f0783d901074833c9e9f8e8c21d73ff23d90ce7 (from https://pypi.org/simple/pybiopax/), version: 0.0.5 2022-09-06T23:03:51,460 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/2b/eb/f229e412c9f65c76da2a2b3bfe9b8eac45c32f363cc159dff7fc497d4707/pybiopax-0.0.6-py3-none-any.whl#sha256=4a88740fa60610b94402c046deaed9f72734c0ade5655f9e75476af483c3b544 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,461 Found link https://files.pythonhosted.org/packages/14/cf/327063ff9cd58a2ed387d38a1bf153b39da0bac03411c4faf19e356ebd5f/pybiopax-0.0.6.tar.gz#sha256=f7490919ec35cfbdb3d668683dd0c124fc906c98a9c538798657befc5de0f4ed (from https://pypi.org/simple/pybiopax/), version: 0.0.6 2022-09-06T23:03:51,461 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/5a/ab/9f08d9c4dd6fbc8dce3a42fd39eceab278480a769dfedff27f9ad74f11cc/pybiopax-0.1.0-py3-none-any.whl#sha256=a41085a42a80f339ba242c4b8e0a06d9cf4d0b91e1e7c3f90171464bf0e8388c (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,462 Found link https://files.pythonhosted.org/packages/a7/0d/80cd1f47934d80bb5e68d654dd0d263197316a6b9778d8e021062c0342c8/pybiopax-0.1.0.tar.gz#sha256=870ae3f3ec492172832ce917a23ca35ac9f252cd6e8bbefb5f2cc2def1d44b1e (from https://pypi.org/simple/pybiopax/), version: 0.1.0 2022-09-06T23:03:51,463 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/a0/a8/47264cfa6c9739634365857fadaf4025571ab8ae11dff269ffeaa5e49bc2/pybiopax-0.1.1-py3-none-any.whl#sha256=549d3fc7216e135e49b7160efb673413c96b4a480f2ad396b8946248a2fbd478 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,463 Found link https://files.pythonhosted.org/packages/70/ba/7d9fce5935fc3e22208d85b5bdddd6a145583391258166f0085caa1a360a/pybiopax-0.1.1.tar.gz#sha256=147818d192c7229399d92ff76881011559ffb04c718695e181ed15c48ad7456c (from https://pypi.org/simple/pybiopax/), version: 0.1.1 2022-09-06T23:03:51,464 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/2e/b5/ce9ce782f2f9fb40d09359462f8f88eba2f72c0abb90aa848140798eb165/pybiopax-0.1.2-py3-none-any.whl#sha256=33a96994bc0488b4ced556bc977bd6dbe5345a06dad0fcd993dab2f6cd6cea96 (from https://pypi.org/simple/pybiopax/) 2022-09-06T23:03:51,464 Found link https://files.pythonhosted.org/packages/81/75/d891cd9d53364f43e14a572521d85564dcb9595b8c20334800482ccbf1a1/pybiopax-0.1.2.tar.gz#sha256=c390ac35fcdf8e290c921137d7a3bf643ad2f8d3092a96dfb6915111ee4f4e15 (from https://pypi.org/simple/pybiopax/), version: 0.1.2 2022-09-06T23:03:51,465 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiopax/ 2022-09-06T23:03:51,466 Getting page https://www.piwheels.org/simple/pybiopax/ 2022-09-06T23:03:51,468 Found index url https://www.piwheels.org/simple 2022-09-06T23:03:51,677 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.1.1-py3-none-any.whl#sha256=d11e4da3310b72e012fbab878a991bdf5ae2656408e317c2bdea80b9d859f4e6 (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,678 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.1.0-py3-none-any.whl#sha256=30c744b9c7a6be67aca5b1840b32d651e00ff1f624ea034cab1e85a8300f4dea (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,679 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.6-py3-none-any.whl#sha256=4a88740fa60610b94402c046deaed9f72734c0ade5655f9e75476af483c3b544 (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,679 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.5-py3-none-any.whl#sha256=9fcb5ffb3becec2802bccd592a93820a9c92f9f2520531f40631e05f64afcb4a (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,680 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.4-py3-none-any.whl#sha256=006600ae929ce920fc585010e62904f512bab34379ca9a736742dd4987d00001 (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,680 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.3-py3-none-any.whl#sha256=e1a1121b91ba8e68c0a7492a1826eeab89766043c9f98ad1891fcde36b33d241 (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,681 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.2-py3-none-any.whl#sha256=bd125e369b3b401907130de49cca10869081f87e182cdd58c306b504d13b03fe (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,681 Skipping link: No binaries permitted for pybiopax: https://www.piwheels.org/simple/pybiopax/pybiopax-0.0.1-py3-none-any.whl#sha256=8a2bf2a324a782e0ab5adc5c841746d918d023ba07761260e1208e30af645ca4 (from https://www.piwheels.org/simple/pybiopax/) 2022-09-06T23:03:51,682 Skipping link: not a file: https://www.piwheels.org/simple/pybiopax/ 2022-09-06T23:03:51,682 Skipping link: not a file: https://pypi.org/simple/pybiopax/ 2022-09-06T23:03:51,719 Given no hashes to check 1 links for project 'pybiopax': discarding no candidates 2022-09-06T23:03:51,750 Collecting pybiopax==0.1.2 2022-09-06T23:03:51,755 Created temporary directory: /tmp/pip-unpack-bnkzpb2u 2022-09-06T23:03:52,699 Downloading pybiopax-0.1.2.tar.gz (3.7 MB) 2022-09-06T23:03:53,932 Added pybiopax==0.1.2 from https://files.pythonhosted.org/packages/81/75/d891cd9d53364f43e14a572521d85564dcb9595b8c20334800482ccbf1a1/pybiopax-0.1.2.tar.gz#sha256=c390ac35fcdf8e290c921137d7a3bf643ad2f8d3092a96dfb6915111ee4f4e15 to build tracker '/tmp/pip-build-tracker-56ru9u8i' 2022-09-06T23:03:53,942 Created temporary directory: /tmp/pip-build-env-1e061xet 2022-09-06T23:03:53,956 Created temporary directory: /tmp/pip-standalone-pip-uboduavl 2022-09-06T23:03:56,266 Installing build dependencies: started 2022-09-06T23:03:56,268 Running command pip subprocess to install build dependencies 2022-09-06T23:04:05,842 Using pip 22.1.2 from /tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip (python 3.7) 2022-09-06T23:04:07,617 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-06T23:04:11,829 Collecting setuptools>=40.8.0 2022-09-06T23:04:12,109 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.3.0-py3-none-any.whl (1.2 MB) 2022-09-06T23:04:12,773 Collecting wheel 2022-09-06T23:04:12,806 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-09-06T23:04:26,012 Installing collected packages: wheel, setuptools 2022-09-06T23:04:26,298 Creating /tmp/pip-build-env-1e061xet/overlay/bin 2022-09-06T23:04:26,302 changing mode of /tmp/pip-build-env-1e061xet/overlay/bin/wheel to 755 2022-09-06T23:04:31,154 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2022-09-06T23:04:31,155 espnet-onnx 0.1.9 requires espnet-tts-frontend, which is not installed. 2022-09-06T23:04:31,155 espnet-onnx 0.1.9 requires g2p-en, which is not installed. 2022-09-06T23:04:31,156 espnet-onnx 0.1.9 requires jamo==0.4.1, which is not installed. 2022-09-06T23:04:31,156 espnet-onnx 0.1.9 requires librosa>=0.8.0, which is not installed. 2022-09-06T23:04:31,156 espnet-onnx 0.1.9 requires onnxruntime>=1.4.0, which is not installed. 2022-09-06T23:04:31,157 espnet-onnx 0.1.9 requires sentencepiece!=0.1.92,>=0.1.91, which is not installed. 2022-09-06T23:04:31,157 espnet-onnx 0.1.9 requires typeguard>=2.7.0, which is not installed. 2022-09-06T23:04:31,157 espnet-onnx 0.1.9 requires numpy<=1.21.3, but you have numpy 1.21.4 which is incompatible. 2022-09-06T23:04:31,158 Successfully installed setuptools-65.3.0 wheel-0.37.1 2022-09-06T23:04:31,391 --- Logging error --- 2022-09-06T23:04:31,391 Traceback (most recent call last): 2022-09-06T23:04:31,392 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-09-06T23:04:31,392 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-09-06T23:04:31,392 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-09-06T23:04:31,393 extend(render(renderable, render_options)) 2022-09-06T23:04:31,393 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-09-06T23:04:31,393 for render_output in iter_render: 2022-09-06T23:04:31,394 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-09-06T23:04:31,394 for line in lines: 2022-09-06T23:04:31,394 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-09-06T23:04:31,395 for segment in segments: 2022-09-06T23:04:31,395 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-09-06T23:04:31,395 renderable = rich_cast(renderable) 2022-09-06T23:04:31,395 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-09-06T23:04:31,396 renderable = cast_method() 2022-09-06T23:04:31,396 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-09-06T23:04:31,396 pip_cmd = get_best_invocation_for_this_pip() 2022-09-06T23:04:31,397 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-09-06T23:04:31,397 os.path.join(binary_prefix, exe_name), 2022-09-06T23:04:31,397 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-09-06T23:04:31,398 s2 = os.stat(f2) 2022-09-06T23:04:31,398 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-09-06T23:04:31,398 Call stack: 2022-09-06T23:04:31,399 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-09-06T23:04:31,399 "__main__", mod_spec) 2022-09-06T23:04:31,399 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-09-06T23:04:31,400 exec(code, run_globals) 2022-09-06T23:04:31,400 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/__main__.py", line 31, in 2022-09-06T23:04:31,400 sys.exit(_main()) 2022-09-06T23:04:31,400 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-09-06T23:04:31,401 return command.main(cmd_args) 2022-09-06T23:04:31,401 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-09-06T23:04:31,401 return self._main(args) 2022-09-06T23:04:31,402 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-09-06T23:04:31,402 self.handle_pip_version_check(options) 2022-09-06T23:04:31,402 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-09-06T23:04:31,402 pip_self_version_check(session, options) 2022-09-06T23:04:31,403 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-09-06T23:04:31,403 logger.info("[present-rich] %s", upgrade_prompt) 2022-09-06T23:04:31,403 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-09-06T23:04:31,404 self._log(INFO, msg, args, **kwargs) 2022-09-06T23:04:31,404 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-09-06T23:04:31,404 self.handle(record) 2022-09-06T23:04:31,405 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-09-06T23:04:31,405 self.callHandlers(record) 2022-09-06T23:04:31,405 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-09-06T23:04:31,406 hdlr.handle(record) 2022-09-06T23:04:31,406 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-09-06T23:04:31,406 self.emit(record) 2022-09-06T23:04:31,407 File "/tmp/pip-standalone-pip-uboduavl/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-09-06T23:04:31,407 self.handleError(record) 2022-09-06T23:04:31,407 Message: '[present-rich] %s' 2022-09-06T23:04:31,408 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-09-06T23:04:31,898 Installing build dependencies: finished with status 'done' 2022-09-06T23:04:31,925 Getting requirements to build wheel: started 2022-09-06T23:04:31,927 Running command Getting requirements to build wheel 2022-09-06T23:04:38,346 running egg_info 2022-09-06T23:04:38,981 writing pybiopax.egg-info/PKG-INFO 2022-09-06T23:04:39,581 writing dependency_links to pybiopax.egg-info/dependency_links.txt 2022-09-06T23:04:42,577 writing requirements to pybiopax.egg-info/requires.txt 2022-09-06T23:04:43,180 writing top-level names to pybiopax.egg-info/top_level.txt 2022-09-06T23:04:43,913 reading manifest file 'pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:04:43,923 reading manifest template 'MANIFEST.in' 2022-09-06T23:04:43,929 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2022-09-06T23:04:43,929 adding license file 'LICENSE' 2022-09-06T23:04:43,937 writing manifest file 'pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:04:44,162 Getting requirements to build wheel: finished with status 'done' 2022-09-06T23:04:44,183 Created temporary directory: /tmp/pip-modern-metadata-uloup8_t 2022-09-06T23:04:44,189 Preparing metadata (pyproject.toml): started 2022-09-06T23:04:44,191 Running command Preparing metadata (pyproject.toml) 2022-09-06T23:04:50,462 running dist_info 2022-09-06T23:04:51,116 creating /tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info 2022-09-06T23:04:51,741 writing /tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/PKG-INFO 2022-09-06T23:04:52,333 writing dependency_links to /tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/dependency_links.txt 2022-09-06T23:04:55,285 writing requirements to /tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/requires.txt 2022-09-06T23:04:55,876 writing top-level names to /tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/top_level.txt 2022-09-06T23:04:55,879 writing manifest file '/tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:04:56,599 reading manifest file '/tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:04:56,603 reading manifest template 'MANIFEST.in' 2022-09-06T23:04:56,611 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2022-09-06T23:04:56,613 adding license file 'LICENSE' 2022-09-06T23:04:56,619 writing manifest file '/tmp/pip-modern-metadata-uloup8_t/pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:04:56,623 creating '/tmp/pip-modern-metadata-uloup8_t/pybiopax-0.1.2.dist-info' 2022-09-06T23:04:56,838 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-06T23:04:57,076 Preparing metadata (pyproject.toml): finished with status 'done' 2022-09-06T23:04:57,091 Source in /tmp/pip-wheel-fr95t2p9/pybiopax_569f5e03f5f6453f98fdd02aa5a66a55 has version 0.1.2, which satisfies requirement pybiopax==0.1.2 from https://files.pythonhosted.org/packages/81/75/d891cd9d53364f43e14a572521d85564dcb9595b8c20334800482ccbf1a1/pybiopax-0.1.2.tar.gz#sha256=c390ac35fcdf8e290c921137d7a3bf643ad2f8d3092a96dfb6915111ee4f4e15 2022-09-06T23:04:57,094 Removed pybiopax==0.1.2 from https://files.pythonhosted.org/packages/81/75/d891cd9d53364f43e14a572521d85564dcb9595b8c20334800482ccbf1a1/pybiopax-0.1.2.tar.gz#sha256=c390ac35fcdf8e290c921137d7a3bf643ad2f8d3092a96dfb6915111ee4f4e15 from build tracker '/tmp/pip-build-tracker-56ru9u8i' 2022-09-06T23:04:57,104 Created temporary directory: /tmp/pip-unpack-8glcdeli 2022-09-06T23:04:57,105 Building wheels for collected packages: pybiopax 2022-09-06T23:04:57,116 Created temporary directory: /tmp/pip-wheel-stw8h1vm 2022-09-06T23:04:57,116 Destination directory: /tmp/pip-wheel-stw8h1vm 2022-09-06T23:04:57,121 Building wheel for pybiopax (pyproject.toml): started 2022-09-06T23:04:57,123 Running command Building wheel for pybiopax (pyproject.toml) 2022-09-06T23:05:02,828 running bdist_wheel 2022-09-06T23:05:04,046 running build 2022-09-06T23:05:04,047 running build_py 2022-09-06T23:05:04,670 creating build 2022-09-06T23:05:04,670 creating build/lib 2022-09-06T23:05:04,672 creating build/lib/pybiopax 2022-09-06T23:05:04,673 copying pybiopax/__init__.py -> build/lib/pybiopax 2022-09-06T23:05:04,677 copying pybiopax/paths.py -> build/lib/pybiopax 2022-09-06T23:05:04,680 copying pybiopax/references.py -> build/lib/pybiopax 2022-09-06T23:05:04,683 copying pybiopax/pc_client.py -> build/lib/pybiopax 2022-09-06T23:05:04,686 copying pybiopax/xml_util.py -> build/lib/pybiopax 2022-09-06T23:05:04,690 copying pybiopax/api.py -> build/lib/pybiopax 2022-09-06T23:05:04,695 creating build/lib/pybiopax/tests 2022-09-06T23:05:04,696 copying pybiopax/tests/test_biopax.py -> build/lib/pybiopax/tests 2022-09-06T23:05:04,700 copying pybiopax/tests/__init__.py -> build/lib/pybiopax/tests 2022-09-06T23:05:04,703 copying pybiopax/tests/test_paths.py -> build/lib/pybiopax/tests 2022-09-06T23:05:04,708 creating build/lib/pybiopax/biopax 2022-09-06T23:05:04,709 copying pybiopax/biopax/model.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:04,713 copying pybiopax/biopax/__init__.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:04,716 copying pybiopax/biopax/interaction.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:04,720 copying pybiopax/biopax/base.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:04,724 copying pybiopax/biopax/physical_entity.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:04,727 copying pybiopax/biopax/util.py -> build/lib/pybiopax/biopax 2022-09-06T23:05:06,002 installing to build/bdist.linux-armv7l/wheel 2022-09-06T23:05:06,003 running install 2022-09-06T23:05:06,065 running install_lib 2022-09-06T23:05:06,688 creating build/bdist.linux-armv7l 2022-09-06T23:05:06,689 creating build/bdist.linux-armv7l/wheel 2022-09-06T23:05:06,692 creating build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,694 copying build/lib/pybiopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,699 creating build/bdist.linux-armv7l/wheel/pybiopax/tests 2022-09-06T23:05:06,701 copying build/lib/pybiopax/tests/test_biopax.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2022-09-06T23:05:06,704 copying build/lib/pybiopax/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2022-09-06T23:05:06,707 copying build/lib/pybiopax/tests/test_paths.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2022-09-06T23:05:06,711 copying build/lib/pybiopax/paths.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,714 copying build/lib/pybiopax/references.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,718 copying build/lib/pybiopax/pc_client.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,723 creating build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,724 copying build/lib/pybiopax/biopax/model.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,729 copying build/lib/pybiopax/biopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,732 copying build/lib/pybiopax/biopax/interaction.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,736 copying build/lib/pybiopax/biopax/base.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,740 copying build/lib/pybiopax/biopax/physical_entity.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,743 copying build/lib/pybiopax/biopax/util.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2022-09-06T23:05:06,748 copying build/lib/pybiopax/xml_util.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,751 copying build/lib/pybiopax/api.py -> build/bdist.linux-armv7l/wheel/pybiopax 2022-09-06T23:05:06,755 running install_egg_info 2022-09-06T23:05:08,079 running egg_info 2022-09-06T23:05:08,701 writing pybiopax.egg-info/PKG-INFO 2022-09-06T23:05:09,290 writing dependency_links to pybiopax.egg-info/dependency_links.txt 2022-09-06T23:05:12,218 writing requirements to pybiopax.egg-info/requires.txt 2022-09-06T23:05:12,804 writing top-level names to pybiopax.egg-info/top_level.txt 2022-09-06T23:05:12,850 reading manifest file 'pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:05:12,857 reading manifest template 'MANIFEST.in' 2022-09-06T23:05:12,861 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2022-09-06T23:05:12,862 adding license file 'LICENSE' 2022-09-06T23:05:12,869 writing manifest file 'pybiopax.egg-info/SOURCES.txt' 2022-09-06T23:05:12,872 Copying pybiopax.egg-info to build/bdist.linux-armv7l/wheel/pybiopax-0.1.2-py3.7.egg-info 2022-09-06T23:05:12,893 running install_scripts 2022-09-06T23:05:13,046 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-06T23:05:13,054 creating build/bdist.linux-armv7l/wheel/pybiopax-0.1.2.dist-info/WHEEL 2022-09-06T23:05:13,059 creating '/tmp/pip-wheel-stw8h1vm/tmp233j_lov/pybiopax-0.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-06T23:05:13,063 adding 'pybiopax/__init__.py' 2022-09-06T23:05:13,067 adding 'pybiopax/api.py' 2022-09-06T23:05:13,071 adding 'pybiopax/paths.py' 2022-09-06T23:05:13,073 adding 'pybiopax/pc_client.py' 2022-09-06T23:05:13,076 adding 'pybiopax/references.py' 2022-09-06T23:05:13,079 adding 'pybiopax/xml_util.py' 2022-09-06T23:05:13,082 adding 'pybiopax/biopax/__init__.py' 2022-09-06T23:05:13,086 adding 'pybiopax/biopax/base.py' 2022-09-06T23:05:13,088 adding 'pybiopax/biopax/interaction.py' 2022-09-06T23:05:13,091 adding 'pybiopax/biopax/model.py' 2022-09-06T23:05:13,094 adding 'pybiopax/biopax/physical_entity.py' 2022-09-06T23:05:13,099 adding 'pybiopax/biopax/util.py' 2022-09-06T23:05:13,102 adding 'pybiopax/tests/__init__.py' 2022-09-06T23:05:13,105 adding 'pybiopax/tests/test_biopax.py' 2022-09-06T23:05:13,108 adding 'pybiopax/tests/test_paths.py' 2022-09-06T23:05:13,112 adding 'pybiopax-0.1.2.dist-info/LICENSE' 2022-09-06T23:05:13,115 adding 'pybiopax-0.1.2.dist-info/METADATA' 2022-09-06T23:05:13,117 adding 'pybiopax-0.1.2.dist-info/WHEEL' 2022-09-06T23:05:13,118 adding 'pybiopax-0.1.2.dist-info/top_level.txt' 2022-09-06T23:05:13,120 adding 'pybiopax-0.1.2.dist-info/RECORD' 2022-09-06T23:05:13,124 removing build/bdist.linux-armv7l/wheel 2022-09-06T23:05:13,395 Building wheel for pybiopax (pyproject.toml): finished with status 'done' 2022-09-06T23:05:13,409 Created wheel for pybiopax: filename=pybiopax-0.1.2-py3-none-any.whl size=23260 sha256=5fcf4e53e1b6f6c74c0393ff30957053829ad3926508b082ba41a248d9f95b22 2022-09-06T23:05:13,411 Stored in directory: /tmp/pip-ephem-wheel-cache-k27yiw5h/wheels/80/05/dc/33310f2769d03cacf39997881941a0e8b4062230667a1f07d5 2022-09-06T23:05:13,434 Successfully built pybiopax 2022-09-06T23:05:13,443 Removed build tracker: '/tmp/pip-build-tracker-56ru9u8i'