2022-09-13T11:13:32,801 Created temporary directory: /tmp/pip-ephem-wheel-cache-r456pzmd 2022-09-13T11:13:32,807 Created temporary directory: /tmp/pip-build-tracker-i12uyqc0 2022-09-13T11:13:32,808 Initialized build tracking at /tmp/pip-build-tracker-i12uyqc0 2022-09-13T11:13:32,808 Created build tracker: /tmp/pip-build-tracker-i12uyqc0 2022-09-13T11:13:32,808 Entered build tracker: /tmp/pip-build-tracker-i12uyqc0 2022-09-13T11:13:32,810 Created temporary directory: /tmp/pip-wheel-0c24vcoa 2022-09-13T11:13:32,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-13T11:13:32,886 2 location(s) to search for versions of capice: 2022-09-13T11:13:32,886 * https://pypi.org/simple/capice/ 2022-09-13T11:13:32,886 * https://www.piwheels.org/simple/capice/ 2022-09-13T11:13:32,887 Fetching project page and analyzing links: https://pypi.org/simple/capice/ 2022-09-13T11:13:32,888 Getting page https://pypi.org/simple/capice/ 2022-09-13T11:13:32,892 Found index url https://pypi.org/simple 2022-09-13T11:13:33,013 Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0 2022-09-13T11:13:33,015 Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz#sha256=b5eb8501028078b58b078728cb5927d30f736dec35d8d17784807fb18bece558 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1 2022-09-13T11:13:33,016 Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz#sha256=fd1c7a04ef0b10576b9843cecc7a188c20ae39edb4ed4a8fec27c8abc13d23f4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2 2022-09-13T11:13:33,018 Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz#sha256=331d26cc87603dd46c81b0d670c6c27566c204ef5f68a150de9dced4d4d46018 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3 2022-09-13T11:13:33,019 Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz#sha256=367c328ad9259ebe6610ea4e335d073cad41187bef8d7461ee2c936f9f66de26 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4 2022-09-13T11:13:33,020 Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz#sha256=a50e36cca3b5152d62d295cd04dc7d30cd4f1ef9d8fa57e22e248fc525b1c3eb (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0 2022-09-13T11:13:33,022 Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz#sha256=dea305de80545a7a0dbf2beac54412500af956d0d02d214fc50dd31dd4af8e95 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0 2022-09-13T11:13:33,023 Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz#sha256=0790bb06d06ebfd6b8314ed31fbb06c31caac1a85a51d4c837efdc060886df4f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1 2022-09-13T11:13:33,024 Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz#sha256=244c612dd6058df96b21011a5460e69ef9b887dedf64fa7526cd65538c3c39a9 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2 2022-09-13T11:13:33,026 Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz#sha256=23bafed2b9bf8b449d4cc33c058b06d50665be06bfeb856f5c59713e20a515b4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0 2022-09-13T11:13:33,027 Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1 2022-09-13T11:13:33,028 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/ 2022-09-13T11:13:33,029 Getting page https://www.piwheels.org/simple/capice/ 2022-09-13T11:13:33,031 Found index url https://www.piwheels.org/simple 2022-09-13T11:13:33,257 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,258 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,258 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,259 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,259 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,260 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,260 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,261 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-13T11:13:33,261 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7) 2022-09-13T11:13:33,262 Skipping link: not a file: https://www.piwheels.org/simple/capice/ 2022-09-13T11:13:33,262 Skipping link: not a file: https://pypi.org/simple/capice/ 2022-09-13T11:13:33,310 Given no hashes to check 1 links for project 'capice': discarding no candidates 2022-09-13T11:13:33,351 Collecting capice==3.2.1 2022-09-13T11:13:33,356 Created temporary directory: /tmp/pip-unpack-fb58c2w2 2022-09-13T11:13:33,584 Downloading capice-3.2.1.tar.gz (35 kB) 2022-09-13T11:13:33,871 Added capice==3.2.1 from https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c to build tracker '/tmp/pip-build-tracker-i12uyqc0' 2022-09-13T11:13:33,874 Running setup.py (path:/tmp/pip-wheel-0c24vcoa/capice_b7b6d45cde834dda99ea961e821b704f/setup.py) egg_info for package capice 2022-09-13T11:13:33,875 Created temporary directory: /tmp/pip-pip-egg-info-105lyb3f 2022-09-13T11:13:33,876 Preparing metadata (setup.py): started 2022-09-13T11:13:33,878 Running command python setup.py egg_info 2022-09-13T11:13:41,685 running egg_info 2022-09-13T11:13:41,693 creating /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info 2022-09-13T11:13:42,344 writing /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/PKG-INFO 2022-09-13T11:13:42,903 writing dependency_links to /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/dependency_links.txt 2022-09-13T11:13:44,566 writing entry points to /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/entry_points.txt 2022-09-13T11:13:45,673 writing requirements to /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/requires.txt 2022-09-13T11:13:46,229 writing top-level names to /tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/top_level.txt 2022-09-13T11:13:46,232 writing manifest file '/tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/SOURCES.txt' 2022-09-13T11:13:46,987 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-09-13T11:13:47,111 reading manifest file '/tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/SOURCES.txt' 2022-09-13T11:13:47,114 adding license file 'LICENSE' 2022-09-13T11:13:47,123 writing manifest file '/tmp/pip-pip-egg-info-105lyb3f/capice.egg-info/SOURCES.txt' 2022-09-13T11:13:47,329 Preparing metadata (setup.py): finished with status 'done' 2022-09-13T11:13:47,342 Source in /tmp/pip-wheel-0c24vcoa/capice_b7b6d45cde834dda99ea961e821b704f has version 3.2.1, which satisfies requirement capice==3.2.1 from https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c 2022-09-13T11:13:47,344 Removed capice==3.2.1 from https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c from build tracker '/tmp/pip-build-tracker-i12uyqc0' 2022-09-13T11:13:47,359 Created temporary directory: /tmp/pip-unpack-hpk0zanp 2022-09-13T11:13:47,360 Building wheels for collected packages: capice 2022-09-13T11:13:47,370 Created temporary directory: /tmp/pip-wheel-g87akwm0 2022-09-13T11:13:47,371 Building wheel for capice (setup.py): started 2022-09-13T11:13:47,372 Destination directory: /tmp/pip-wheel-g87akwm0 2022-09-13T11:13:47,373 Running command python setup.py bdist_wheel 2022-09-13T11:13:54,954 running bdist_wheel 2022-09-13T11:13:56,393 running build 2022-09-13T11:13:56,394 running build_py 2022-09-13T11:13:57,052 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-09-13T11:13:57,057 creating build 2022-09-13T11:13:57,059 creating build/lib 2022-09-13T11:13:57,061 creating build/lib/molgenis 2022-09-13T11:13:57,062 creating build/lib/molgenis/capice 2022-09-13T11:13:57,065 copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,070 copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,075 copying src/molgenis/capice/main_explain.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,079 copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,083 copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,088 copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice 2022-09-13T11:13:57,094 creating build/lib/molgenis/capice/cli 2022-09-13T11:13:57,096 copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli 2022-09-13T11:13:57,101 copying src/molgenis/capice/cli/args_handler_explain.py -> build/lib/molgenis/capice/cli 2022-09-13T11:13:57,105 copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli 2022-09-13T11:13:57,110 copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli 2022-09-13T11:13:57,113 copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli 2022-09-13T11:13:57,120 creating build/lib/molgenis/capice/vep 2022-09-13T11:13:57,123 copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,127 copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,131 copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,135 copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,140 copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,144 copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,148 copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,152 copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,155 copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,160 copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,164 copying src/molgenis/capice/vep/seq.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,168 copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,172 copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,176 copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep 2022-09-13T11:13:57,182 creating build/lib/molgenis/capice/core 2022-09-13T11:13:57,184 copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core 2022-09-13T11:13:57,188 copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core 2022-09-13T11:13:57,191 copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core 2022-09-13T11:13:57,194 copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core 2022-09-13T11:13:57,198 copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core 2022-09-13T11:13:57,204 creating build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,206 copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,209 copying src/molgenis/capice/utilities/capice_imputing.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,213 copying src/molgenis/capice/utilities/column_utils.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,216 copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,220 copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,224 copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,227 copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,230 copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,234 copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,237 copying src/molgenis/capice/utilities/preprocessor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,242 copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,245 copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,248 copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities 2022-09-13T11:13:57,253 creating build/lib/molgenis/capice/validators 2022-09-13T11:13:57,255 copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,259 copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,262 copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,265 copying src/molgenis/capice/validators/model_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,269 copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,272 copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,275 copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators 2022-09-13T11:13:57,998 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-09-13T11:13:57,999 warnings.warn( 2022-09-13T11:13:58,662 installing to build/bdist.linux-armv7l/wheel 2022-09-13T11:13:58,662 running install 2022-09-13T11:13:58,724 running install_lib 2022-09-13T11:13:59,389 creating build/bdist.linux-armv7l 2022-09-13T11:13:59,390 creating build/bdist.linux-armv7l/wheel 2022-09-13T11:13:59,392 creating build/bdist.linux-armv7l/wheel/molgenis 2022-09-13T11:13:59,395 creating build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,398 creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,400 copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,404 copying build/lib/molgenis/capice/cli/args_handler_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,408 copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,412 copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,415 copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-13T11:13:59,420 creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,422 copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,426 copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,429 copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,432 copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,436 copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,440 copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,443 copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,446 copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,449 copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,452 copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,456 copying build/lib/molgenis/capice/vep/seq.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,460 copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,463 copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,467 copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-13T11:13:59,470 copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,474 copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,479 creating build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,481 copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,484 copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,487 copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,490 copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,493 copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-13T11:13:59,498 copying build/lib/molgenis/capice/main_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,503 creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,504 copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,508 copying build/lib/molgenis/capice/utilities/capice_imputing.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,512 copying build/lib/molgenis/capice/utilities/column_utils.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,515 copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,518 copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,523 copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,526 copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,529 copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,533 copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,536 copying build/lib/molgenis/capice/utilities/preprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,540 copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,543 copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,546 copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-13T11:13:59,551 creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,552 copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,556 copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,559 copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,563 copying build/lib/molgenis/capice/validators/model_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,566 copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,569 copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,571 copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-13T11:13:59,575 copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,578 copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,582 copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-13T11:13:59,585 running install_egg_info 2022-09-13T11:14:00,940 running egg_info 2022-09-13T11:14:01,598 writing src/capice.egg-info/PKG-INFO 2022-09-13T11:14:02,164 writing dependency_links to src/capice.egg-info/dependency_links.txt 2022-09-13T11:14:03,860 writing entry points to src/capice.egg-info/entry_points.txt 2022-09-13T11:14:04,987 writing requirements to src/capice.egg-info/requires.txt 2022-09-13T11:14:05,550 writing top-level names to src/capice.egg-info/top_level.txt 2022-09-13T11:14:05,663 reading manifest file 'src/capice.egg-info/SOURCES.txt' 2022-09-13T11:14:05,669 adding license file 'LICENSE' 2022-09-13T11:14:05,680 writing manifest file 'src/capice.egg-info/SOURCES.txt' 2022-09-13T11:14:05,682 Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-3.2.1-py3.9.egg-info 2022-09-13T11:14:05,707 running install_scripts 2022-09-13T11:14:05,890 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-13T11:14:05,900 creating build/bdist.linux-armv7l/wheel/capice-3.2.1.dist-info/WHEEL 2022-09-13T11:14:05,904 creating '/tmp/pip-wheel-g87akwm0/capice-3.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-13T11:14:05,913 adding 'molgenis/capice/__init__.py' 2022-09-13T11:14:05,915 adding 'molgenis/capice/capice.py' 2022-09-13T11:14:05,918 adding 'molgenis/capice/main_capice.py' 2022-09-13T11:14:05,921 adding 'molgenis/capice/main_explain.py' 2022-09-13T11:14:05,924 adding 'molgenis/capice/main_predict.py' 2022-09-13T11:14:05,927 adding 'molgenis/capice/main_train.py' 2022-09-13T11:14:05,931 adding 'molgenis/capice/cli/__init__.py' 2022-09-13T11:14:05,933 adding 'molgenis/capice/cli/args_handler_explain.py' 2022-09-13T11:14:05,936 adding 'molgenis/capice/cli/args_handler_parent.py' 2022-09-13T11:14:05,939 adding 'molgenis/capice/cli/args_handler_predict.py' 2022-09-13T11:14:05,942 adding 'molgenis/capice/cli/args_handler_train.py' 2022-09-13T11:14:05,945 adding 'molgenis/capice/core/__init__.py' 2022-09-13T11:14:05,948 adding 'molgenis/capice/core/args_handler.py' 2022-09-13T11:14:05,950 adding 'molgenis/capice/core/capice_exporter.py' 2022-09-13T11:14:05,953 adding 'molgenis/capice/core/capice_manager.py' 2022-09-13T11:14:05,956 adding 'molgenis/capice/core/logger.py' 2022-09-13T11:14:05,960 adding 'molgenis/capice/utilities/__init__.py' 2022-09-13T11:14:05,962 adding 'molgenis/capice/utilities/capice_imputing.py' 2022-09-13T11:14:05,965 adding 'molgenis/capice/utilities/class_suggestor.py' 2022-09-13T11:14:05,967 adding 'molgenis/capice/utilities/column_utils.py' 2022-09-13T11:14:05,969 adding 'molgenis/capice/utilities/custom_logging_filter.py' 2022-09-13T11:14:05,972 adding 'molgenis/capice/utilities/dynamic_loader.py' 2022-09-13T11:14:05,974 adding 'molgenis/capice/utilities/enums.py' 2022-09-13T11:14:05,977 adding 'molgenis/capice/utilities/input_parser.py' 2022-09-13T11:14:05,980 adding 'molgenis/capice/utilities/input_processor.py' 2022-09-13T11:14:05,982 adding 'molgenis/capice/utilities/load_file_postprocessor.py' 2022-09-13T11:14:05,985 adding 'molgenis/capice/utilities/manual_vep_processor.py' 2022-09-13T11:14:05,987 adding 'molgenis/capice/utilities/predictor.py' 2022-09-13T11:14:05,990 adding 'molgenis/capice/utilities/preprocessor.py' 2022-09-13T11:14:05,994 adding 'molgenis/capice/validators/__init__.py' 2022-09-13T11:14:05,996 adding 'molgenis/capice/validators/input_validator.py' 2022-09-13T11:14:05,999 adding 'molgenis/capice/validators/model_validator.py' 2022-09-13T11:14:06,002 adding 'molgenis/capice/validators/post_file_parse_validator.py' 2022-09-13T11:14:06,005 adding 'molgenis/capice/validators/post_vep_processing_validator.py' 2022-09-13T11:14:06,008 adding 'molgenis/capice/validators/property_type_validator.py' 2022-09-13T11:14:06,010 adding 'molgenis/capice/validators/version_validator.py' 2022-09-13T11:14:06,014 adding 'molgenis/capice/vep/__init__.py' 2022-09-13T11:14:06,016 adding 'molgenis/capice/vep/amino_acids.py' 2022-09-13T11:14:06,018 adding 'molgenis/capice/vep/cdna_position.py' 2022-09-13T11:14:06,020 adding 'molgenis/capice/vep/cds_position.py' 2022-09-13T11:14:06,023 adding 'molgenis/capice/vep/consequence.py' 2022-09-13T11:14:06,025 adding 'molgenis/capice/vep/length.py' 2022-09-13T11:14:06,028 adding 'molgenis/capice/vep/poly_phen.py' 2022-09-13T11:14:06,030 adding 'molgenis/capice/vep/protein_position.py' 2022-09-13T11:14:06,032 adding 'molgenis/capice/vep/seq.py' 2022-09-13T11:14:06,034 adding 'molgenis/capice/vep/sift.py' 2022-09-13T11:14:06,037 adding 'molgenis/capice/vep/template.py' 2022-09-13T11:14:06,039 adding 'molgenis/capice/vep/template_position.py' 2022-09-13T11:14:06,041 adding 'molgenis/capice/vep/template_sift_polyphen.py' 2022-09-13T11:14:06,044 adding 'molgenis/capice/vep/type.py' 2022-09-13T11:14:06,047 adding 'capice-3.2.1.dist-info/LICENSE' 2022-09-13T11:14:06,052 adding 'capice-3.2.1.dist-info/METADATA' 2022-09-13T11:14:06,054 adding 'capice-3.2.1.dist-info/WHEEL' 2022-09-13T11:14:06,056 adding 'capice-3.2.1.dist-info/entry_points.txt' 2022-09-13T11:14:06,058 adding 'capice-3.2.1.dist-info/top_level.txt' 2022-09-13T11:14:06,061 adding 'capice-3.2.1.dist-info/RECORD' 2022-09-13T11:14:06,066 removing build/bdist.linux-armv7l/wheel 2022-09-13T11:14:06,348 Building wheel for capice (setup.py): finished with status 'done' 2022-09-13T11:14:06,357 Created wheel for capice: filename=capice-3.2.1-py3-none-any.whl size=53053 sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 2022-09-13T11:14:06,359 Stored in directory: /tmp/pip-ephem-wheel-cache-r456pzmd/wheels/c4/d6/3c/05d05e398976dee34cce05d9e940b09e23da465a4ffd285978 2022-09-13T11:14:06,389 Successfully built capice 2022-09-13T11:14:06,401 Removed build tracker: '/tmp/pip-build-tracker-i12uyqc0'