2022-09-13T16:28:11,867 Created temporary directory: /tmp/pip-ephem-wheel-cache-au_fvzb7 2022-09-13T16:28:11,873 Created temporary directory: /tmp/pip-build-tracker-o46fbyc5 2022-09-13T16:28:11,873 Initialized build tracking at /tmp/pip-build-tracker-o46fbyc5 2022-09-13T16:28:11,874 Created build tracker: /tmp/pip-build-tracker-o46fbyc5 2022-09-13T16:28:11,874 Entered build tracker: /tmp/pip-build-tracker-o46fbyc5 2022-09-13T16:28:11,875 Created temporary directory: /tmp/pip-wheel-mhxt290t 2022-09-13T16:28:11,939 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-13T16:28:11,948 2 location(s) to search for versions of codon-bias: 2022-09-13T16:28:11,948 * https://pypi.org/simple/codon-bias/ 2022-09-13T16:28:11,948 * https://www.piwheels.org/simple/codon-bias/ 2022-09-13T16:28:11,949 Fetching project page and analyzing links: https://pypi.org/simple/codon-bias/ 2022-09-13T16:28:11,950 Getting page https://pypi.org/simple/codon-bias/ 2022-09-13T16:28:11,954 Found index url https://pypi.org/simple 2022-09-13T16:28:12,139 Found link https://files.pythonhosted.org/packages/17/35/c2e6fcb73d84d1f5035be8092cee3b2af06af723b84352638447529d227c/codon-bias-0.1.0.tar.gz#sha256=535e9be8a0fb595a27b6a27a6014ac62b5863fac24623f6bfd3119a06c160c34 (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.1.0 2022-09-13T16:28:12,140 Found link https://files.pythonhosted.org/packages/cc/4e/11bcc186f4618fba833af761d7d3e7598b3c57ee4d11f7c733790bb5db20/codon-bias-0.2.0.tar.gz#sha256=d7e0d3190fbfb06cd3fd650fa52ac159d92b73eaa3e321dc2b7fe5190853044c (from https://pypi.org/simple/codon-bias/) (requires-python:>=3), version: 0.2.0 2022-09-13T16:28:12,141 Fetching project page and analyzing links: https://www.piwheels.org/simple/codon-bias/ 2022-09-13T16:28:12,142 Getting page https://www.piwheels.org/simple/codon-bias/ 2022-09-13T16:28:12,144 Found index url https://www.piwheels.org/simple 2022-09-13T16:28:12,373 Skipping link: No binaries permitted for codon-bias: https://www.piwheels.org/simple/codon-bias/codon_bias-0.1.0-py3-none-any.whl#sha256=45c2aa92ebf3bab8074d6a6e66799cacc106af5c5635b2eb1d6e2369f37a9ed8 (from https://www.piwheels.org/simple/codon-bias/) (requires-python:>=3) 2022-09-13T16:28:12,374 Skipping link: not a file: https://www.piwheels.org/simple/codon-bias/ 2022-09-13T16:28:12,375 Skipping link: not a file: https://pypi.org/simple/codon-bias/ 2022-09-13T16:28:12,409 Given no hashes to check 1 links for project 'codon-bias': discarding no candidates 2022-09-13T16:28:12,440 Collecting codon-bias==0.2.0 2022-09-13T16:28:12,444 Created temporary directory: /tmp/pip-unpack-bncbva19 2022-09-13T16:28:12,953 Downloading codon-bias-0.2.0.tar.gz (16 kB) 2022-09-13T16:28:13,058 Added codon-bias==0.2.0 from https://files.pythonhosted.org/packages/cc/4e/11bcc186f4618fba833af761d7d3e7598b3c57ee4d11f7c733790bb5db20/codon-bias-0.2.0.tar.gz#sha256=d7e0d3190fbfb06cd3fd650fa52ac159d92b73eaa3e321dc2b7fe5190853044c to build tracker '/tmp/pip-build-tracker-o46fbyc5' 2022-09-13T16:28:13,061 Running setup.py (path:/tmp/pip-wheel-mhxt290t/codon-bias_52864381fcb44388b6449f00ffe776ae/setup.py) egg_info for package codon-bias 2022-09-13T16:28:13,063 Created temporary directory: /tmp/pip-pip-egg-info-vg_rp3we 2022-09-13T16:28:13,063 Preparing metadata (setup.py): started 2022-09-13T16:28:13,065 Running command python setup.py egg_info 2022-09-13T16:28:21,294 running egg_info 2022-09-13T16:28:21,300 creating /tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info 2022-09-13T16:28:22,041 writing /tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/PKG-INFO 2022-09-13T16:28:22,637 writing dependency_links to /tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/dependency_links.txt 2022-09-13T16:28:25,603 writing requirements to /tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/requires.txt 2022-09-13T16:28:26,197 writing top-level names to /tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/top_level.txt 2022-09-13T16:28:26,200 writing manifest file '/tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/SOURCES.txt' 2022-09-13T16:28:27,244 reading manifest file '/tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/SOURCES.txt' 2022-09-13T16:28:27,246 reading manifest template 'MANIFEST.in' 2022-09-13T16:28:27,249 adding license file 'LICENSE' 2022-09-13T16:28:27,254 writing manifest file '/tmp/pip-pip-egg-info-vg_rp3we/codon_bias.egg-info/SOURCES.txt' 2022-09-13T16:28:27,478 Preparing metadata (setup.py): finished with status 'done' 2022-09-13T16:28:27,489 Source in /tmp/pip-wheel-mhxt290t/codon-bias_52864381fcb44388b6449f00ffe776ae has version 0.2.0, which satisfies requirement codon-bias==0.2.0 from https://files.pythonhosted.org/packages/cc/4e/11bcc186f4618fba833af761d7d3e7598b3c57ee4d11f7c733790bb5db20/codon-bias-0.2.0.tar.gz#sha256=d7e0d3190fbfb06cd3fd650fa52ac159d92b73eaa3e321dc2b7fe5190853044c 2022-09-13T16:28:27,491 Removed codon-bias==0.2.0 from https://files.pythonhosted.org/packages/cc/4e/11bcc186f4618fba833af761d7d3e7598b3c57ee4d11f7c733790bb5db20/codon-bias-0.2.0.tar.gz#sha256=d7e0d3190fbfb06cd3fd650fa52ac159d92b73eaa3e321dc2b7fe5190853044c from build tracker '/tmp/pip-build-tracker-o46fbyc5' 2022-09-13T16:28:27,504 Created temporary directory: /tmp/pip-unpack-cbdyvwb9 2022-09-13T16:28:27,505 Building wheels for collected packages: codon-bias 2022-09-13T16:28:27,515 Created temporary directory: /tmp/pip-wheel-q16kyann 2022-09-13T16:28:27,516 Building wheel for codon-bias (setup.py): started 2022-09-13T16:28:27,518 Destination directory: /tmp/pip-wheel-q16kyann 2022-09-13T16:28:27,518 Running command python setup.py bdist_wheel 2022-09-13T16:28:35,287 running bdist_wheel 2022-09-13T16:28:35,718 running build 2022-09-13T16:28:35,719 running build_py 2022-09-13T16:28:36,460 creating build 2022-09-13T16:28:36,461 creating build/lib 2022-09-13T16:28:36,462 creating build/lib/codonbias 2022-09-13T16:28:36,464 copying codonbias/__init__.py -> build/lib/codonbias 2022-09-13T16:28:36,468 copying codonbias/utils.py -> build/lib/codonbias 2022-09-13T16:28:36,472 copying codonbias/pairwise.py -> build/lib/codonbias 2022-09-13T16:28:36,476 copying codonbias/stats.py -> build/lib/codonbias 2022-09-13T16:28:36,481 copying codonbias/scores.py -> build/lib/codonbias 2022-09-13T16:28:36,486 running egg_info 2022-09-13T16:28:37,977 writing codon_bias.egg-info/PKG-INFO 2022-09-13T16:28:38,572 writing dependency_links to codon_bias.egg-info/dependency_links.txt 2022-09-13T16:28:41,532 writing requirements to codon_bias.egg-info/requires.txt 2022-09-13T16:28:42,126 writing top-level names to codon_bias.egg-info/top_level.txt 2022-09-13T16:28:42,281 reading manifest file 'codon_bias.egg-info/SOURCES.txt' 2022-09-13T16:28:42,285 reading manifest template 'MANIFEST.in' 2022-09-13T16:28:42,287 adding license file 'LICENSE' 2022-09-13T16:28:42,293 writing manifest file 'codon_bias.egg-info/SOURCES.txt' 2022-09-13T16:28:42,298 copying codonbias/genetic_code_ncbi.csv -> build/lib/codonbias 2022-09-13T16:28:42,303 copying codonbias/tAI_svalues_Tuller.csv -> build/lib/codonbias 2022-09-13T16:28:42,307 copying codonbias/tAI_svalues_dosReis.csv -> build/lib/codonbias 2022-09-13T16:28:43,055 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-09-13T16:28:43,056 setuptools.SetuptoolsDeprecationWarning, 2022-09-13T16:28:43,791 installing to build/bdist.linux-armv7l/wheel 2022-09-13T16:28:43,791 running install 2022-09-13T16:28:43,852 running install_lib 2022-09-13T16:28:44,595 creating build/bdist.linux-armv7l 2022-09-13T16:28:44,596 creating build/bdist.linux-armv7l/wheel 2022-09-13T16:28:44,599 creating build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,601 copying build/lib/codonbias/__init__.py -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,605 copying build/lib/codonbias/utils.py -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,609 copying build/lib/codonbias/tAI_svalues_dosReis.csv -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,613 copying build/lib/codonbias/genetic_code_ncbi.csv -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,617 copying build/lib/codonbias/pairwise.py -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,622 copying build/lib/codonbias/stats.py -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,626 copying build/lib/codonbias/tAI_svalues_Tuller.csv -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,630 copying build/lib/codonbias/scores.py -> build/bdist.linux-armv7l/wheel/codonbias 2022-09-13T16:28:44,635 running install_egg_info 2022-09-13T16:28:45,436 Copying codon_bias.egg-info to build/bdist.linux-armv7l/wheel/codon_bias-0.2.0-py3.7.egg-info 2022-09-13T16:28:45,456 running install_scripts 2022-09-13T16:28:45,599 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-13T16:28:45,606 creating build/bdist.linux-armv7l/wheel/codon_bias-0.2.0.dist-info/WHEEL 2022-09-13T16:28:45,611 creating '/tmp/pip-wheel-q16kyann/codon_bias-0.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-13T16:28:45,618 adding 'codonbias/__init__.py' 2022-09-13T16:28:45,621 adding 'codonbias/genetic_code_ncbi.csv' 2022-09-13T16:28:45,624 adding 'codonbias/pairwise.py' 2022-09-13T16:28:45,634 adding 'codonbias/scores.py' 2022-09-13T16:28:45,639 adding 'codonbias/stats.py' 2022-09-13T16:28:45,641 adding 'codonbias/tAI_svalues_Tuller.csv' 2022-09-13T16:28:45,643 adding 'codonbias/tAI_svalues_dosReis.csv' 2022-09-13T16:28:45,646 adding 'codonbias/utils.py' 2022-09-13T16:28:45,648 adding 'codon_bias-0.2.0.dist-info/LICENSE' 2022-09-13T16:28:45,650 adding 'codon_bias-0.2.0.dist-info/METADATA' 2022-09-13T16:28:45,652 adding 'codon_bias-0.2.0.dist-info/WHEEL' 2022-09-13T16:28:45,653 adding 'codon_bias-0.2.0.dist-info/top_level.txt' 2022-09-13T16:28:45,655 adding 'codon_bias-0.2.0.dist-info/RECORD' 2022-09-13T16:28:45,657 removing build/bdist.linux-armv7l/wheel 2022-09-13T16:28:45,904 Building wheel for codon-bias (setup.py): finished with status 'done' 2022-09-13T16:28:45,912 Created wheel for codon-bias: filename=codon_bias-0.2.0-py3-none-any.whl size=19589 sha256=54af1367ee5a968ac294644b098ab9e7b911598789435a083c12187ceeeb410e 2022-09-13T16:28:45,914 Stored in directory: /tmp/pip-ephem-wheel-cache-au_fvzb7/wheels/8e/ad/f7/1deab58f4e483e6c50de8a4d1ed850aa938eda22616873394e 2022-09-13T16:28:45,937 Successfully built codon-bias 2022-09-13T16:28:45,946 Removed build tracker: '/tmp/pip-build-tracker-o46fbyc5'