2022-09-15T22:22:35,855 Created temporary directory: /tmp/pip-ephem-wheel-cache-7bbstd8p 2022-09-15T22:22:35,860 Created temporary directory: /tmp/pip-build-tracker-a0u34s39 2022-09-15T22:22:35,861 Initialized build tracking at /tmp/pip-build-tracker-a0u34s39 2022-09-15T22:22:35,861 Created build tracker: /tmp/pip-build-tracker-a0u34s39 2022-09-15T22:22:35,862 Entered build tracker: /tmp/pip-build-tracker-a0u34s39 2022-09-15T22:22:35,863 Created temporary directory: /tmp/pip-wheel-ljwufevv 2022-09-15T22:22:35,929 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-15T22:22:35,936 2 location(s) to search for versions of soursop: 2022-09-15T22:22:35,936 * https://pypi.org/simple/soursop/ 2022-09-15T22:22:35,936 * https://www.piwheels.org/simple/soursop/ 2022-09-15T22:22:35,938 Fetching project page and analyzing links: https://pypi.org/simple/soursop/ 2022-09-15T22:22:35,939 Getting page https://pypi.org/simple/soursop/ 2022-09-15T22:22:35,942 Found index url https://pypi.org/simple 2022-09-15T22:22:36,146 Found link https://files.pythonhosted.org/packages/9d/4f/ddf85b2a407fb41c9fd04f26f2e8761c1d31c43b42fc6828a8bf18145f89/soursop-0.1.6.tar.gz#sha256=51773b4849e7421e6afdaaff2440d8aecfe3bad53442e61ca5ecd89489250944 (from https://pypi.org/simple/soursop/), version: 0.1.6 2022-09-15T22:22:36,147 Found link https://files.pythonhosted.org/packages/d9/67/f6e2c070bdb22cb1bd094c33934099f9aab0a3ee0034b0893d238dedc0d4/soursop-0.1.9.tar.gz#sha256=0ad2273ff2e58838c1ac3b0c495c68e4caa2837d2a076050b59e6e996971b99e (from https://pypi.org/simple/soursop/), version: 0.1.9 2022-09-15T22:22:36,148 Found link https://files.pythonhosted.org/packages/d0/28/a4e1b5066e10ff76cbce5029c92c9ba6b0b85d97d8ffd548df453b40f251/soursop-0.1.9.2.tar.gz#sha256=1cc3c145527e9790fe87ed29823c58e4a2ac9adcf482d5c0de01c5c250e54a7e (from https://pypi.org/simple/soursop/), version: 0.1.9.2 2022-09-15T22:22:36,148 Found link https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz#sha256=3b6e1b213ff928faad1fb53bab6ae1c32cd6a1656b39e9b39ce11566c85afae1 (from https://pypi.org/simple/soursop/), version: 0.2.1 2022-09-15T22:22:36,149 Fetching project page and analyzing links: https://www.piwheels.org/simple/soursop/ 2022-09-15T22:22:36,150 Getting page https://www.piwheels.org/simple/soursop/ 2022-09-15T22:22:36,152 Found index url https://www.piwheels.org/simple 2022-09-15T22:22:36,380 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-0.1.9.2-py3-none-any.whl#sha256=38f02f96c99d39c61c4b99229ec88dc1eef708d72d3e4eeb32241e84492d5df2 (from https://www.piwheels.org/simple/soursop/) 2022-09-15T22:22:36,381 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-0.1.9-py3-none-any.whl#sha256=14de7fb938ee36216f3e7bd8b74f3f4e87dfe5388e46e0efd5ecf50c47a52aa9 (from https://www.piwheels.org/simple/soursop/) 2022-09-15T22:22:36,382 Skipping link: No binaries permitted for soursop: https://www.piwheels.org/simple/soursop/soursop-0.1.6-py3-none-any.whl#sha256=30d39e6ce8c0fe82b8f61b0bb9f711563583bc0b2b891e81c6c730b14371ab7e (from https://www.piwheels.org/simple/soursop/) 2022-09-15T22:22:36,382 Skipping link: not a file: https://www.piwheels.org/simple/soursop/ 2022-09-15T22:22:36,383 Skipping link: not a file: https://pypi.org/simple/soursop/ 2022-09-15T22:22:36,418 Given no hashes to check 1 links for project 'soursop': discarding no candidates 2022-09-15T22:22:36,448 Collecting soursop==0.2.1 2022-09-15T22:22:36,453 Created temporary directory: /tmp/pip-unpack-0lau0zgm 2022-09-15T22:22:36,686 Downloading soursop-0.2.1.tar.gz (471 kB) 2022-09-15T22:22:37,248 Added soursop==0.2.1 from https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz#sha256=3b6e1b213ff928faad1fb53bab6ae1c32cd6a1656b39e9b39ce11566c85afae1 to build tracker '/tmp/pip-build-tracker-a0u34s39' 2022-09-15T22:22:37,251 Running setup.py (path:/tmp/pip-wheel-ljwufevv/soursop_e7f7114ced1d4fe4b4e6beb590535b16/setup.py) egg_info for package soursop 2022-09-15T22:22:37,252 Created temporary directory: /tmp/pip-pip-egg-info-q22h399l 2022-09-15T22:22:37,253 Preparing metadata (setup.py): started 2022-09-15T22:22:37,255 Running command python setup.py egg_info 2022-09-15T22:22:45,316 running egg_info 2022-09-15T22:22:45,321 creating /tmp/pip-pip-egg-info-q22h399l/soursop.egg-info 2022-09-15T22:22:46,022 writing /tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/PKG-INFO 2022-09-15T22:22:46,616 writing dependency_links to /tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/dependency_links.txt 2022-09-15T22:22:49,579 writing requirements to /tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/requires.txt 2022-09-15T22:22:50,181 writing top-level names to /tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/top_level.txt 2022-09-15T22:22:50,184 writing manifest file '/tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/SOURCES.txt' 2022-09-15T22:22:50,424 reading manifest file '/tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/SOURCES.txt' 2022-09-15T22:22:50,427 reading manifest template 'MANIFEST.in' 2022-09-15T22:22:50,447 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing 'v0.2.1' to '0.2.1' 2022-09-15T22:22:50,447 warnings.warn(tmpl.format(**locals())) 2022-09-15T22:22:50,448 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-09-15T22:22:50,448 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-09-15T22:22:50,450 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-09-15T22:22:50,480 warning: no files found matching '*include' under directory 'soursop/data' 2022-09-15T22:22:50,498 warning: no files found matching 'soursop/_version.py' under directory 'soursop/data' 2022-09-15T22:22:50,499 adding license file 'LICENSE' 2022-09-15T22:22:50,509 writing manifest file '/tmp/pip-pip-egg-info-q22h399l/soursop.egg-info/SOURCES.txt' 2022-09-15T22:22:50,746 Preparing metadata (setup.py): finished with status 'done' 2022-09-15T22:22:50,756 Source in /tmp/pip-wheel-ljwufevv/soursop_e7f7114ced1d4fe4b4e6beb590535b16 has version 0.2.1, which satisfies requirement soursop==0.2.1 from https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz#sha256=3b6e1b213ff928faad1fb53bab6ae1c32cd6a1656b39e9b39ce11566c85afae1 2022-09-15T22:22:50,758 Removed soursop==0.2.1 from https://files.pythonhosted.org/packages/06/82/f60f9e8d635865a8c5a901dcdf07b976757bae53999d55ee8ba779550c9b/soursop-0.2.1.tar.gz#sha256=3b6e1b213ff928faad1fb53bab6ae1c32cd6a1656b39e9b39ce11566c85afae1 from build tracker '/tmp/pip-build-tracker-a0u34s39' 2022-09-15T22:22:50,767 Created temporary directory: /tmp/pip-unpack-ou0i7tc4 2022-09-15T22:22:50,769 Building wheels for collected packages: soursop 2022-09-15T22:22:50,778 Created temporary directory: /tmp/pip-wheel-7gnl5o9q 2022-09-15T22:22:50,779 Building wheel for soursop (setup.py): started 2022-09-15T22:22:50,781 Destination directory: /tmp/pip-wheel-7gnl5o9q 2022-09-15T22:22:50,781 Running command python setup.py bdist_wheel 2022-09-15T22:22:57,836 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing 'v0.2.1' to '0.2.1' 2022-09-15T22:22:57,837 warnings.warn(tmpl.format(**locals())) 2022-09-15T22:22:58,131 running bdist_wheel 2022-09-15T22:22:58,456 running build 2022-09-15T22:22:58,456 running build_py 2022-09-15T22:22:58,471 creating build 2022-09-15T22:22:58,471 creating build/lib 2022-09-15T22:22:58,473 creating build/lib/soursop 2022-09-15T22:22:58,475 copying soursop/_internal_data.py -> build/lib/soursop 2022-09-15T22:22:58,480 copying soursop/ssprotein.py -> build/lib/soursop 2022-09-15T22:22:58,494 copying soursop/soursop.py -> build/lib/soursop 2022-09-15T22:22:58,498 copying soursop/ssutils.py -> build/lib/soursop 2022-09-15T22:22:58,502 copying soursop/sspolymer.py -> build/lib/soursop 2022-09-15T22:22:58,505 copying soursop/ssdata.py -> build/lib/soursop 2022-09-15T22:22:58,508 copying soursop/sstools.py -> build/lib/soursop 2022-09-15T22:22:58,512 copying soursop/ssexceptions.py -> build/lib/soursop 2022-09-15T22:22:58,516 copying soursop/_version.py -> build/lib/soursop 2022-09-15T22:22:58,519 copying soursop/sssampling.py -> build/lib/soursop 2022-09-15T22:22:58,522 copying soursop/sspre.py -> build/lib/soursop 2022-09-15T22:22:58,526 copying soursop/ssio.py -> build/lib/soursop 2022-09-15T22:22:58,530 copying soursop/ssnmr.py -> build/lib/soursop 2022-09-15T22:22:58,535 copying soursop/ssmutualinformation.py -> build/lib/soursop 2022-09-15T22:22:58,539 copying soursop/configs.py -> build/lib/soursop 2022-09-15T22:22:58,542 copying soursop/__init__.py -> build/lib/soursop 2022-09-15T22:22:58,545 copying soursop/sstrajectory.py -> build/lib/soursop 2022-09-15T22:22:58,553 creating build/lib/soursop/tests 2022-09-15T22:22:58,555 copying soursop/tests/test_soursop.py -> build/lib/soursop/tests 2022-09-15T22:22:58,559 copying soursop/tests/test_ssnmr.py -> build/lib/soursop/tests 2022-09-15T22:22:58,563 copying soursop/tests/conftest.py -> build/lib/soursop/tests 2022-09-15T22:22:58,567 copying soursop/tests/test_sstrajectory.py -> build/lib/soursop/tests 2022-09-15T22:22:58,571 copying soursop/tests/test_ssproteins.py -> build/lib/soursop/tests 2022-09-15T22:22:58,577 copying soursop/tests/test_numbering.py -> build/lib/soursop/tests 2022-09-15T22:22:58,580 copying soursop/tests/test_ssmutual_information.py -> build/lib/soursop/tests 2022-09-15T22:22:58,584 copying soursop/tests/test_caps.py -> build/lib/soursop/tests 2022-09-15T22:22:58,587 copying soursop/tests/__init__.py -> build/lib/soursop/tests 2022-09-15T22:22:58,591 copying soursop/tests/test_ssnmr_extended.py -> build/lib/soursop/tests 2022-09-15T22:22:58,594 copying soursop/tests/test_ssutils.py -> build/lib/soursop/tests 2022-09-15T22:22:58,597 running egg_info 2022-09-15T22:22:59,999 writing soursop.egg-info/PKG-INFO 2022-09-15T22:23:00,586 writing dependency_links to soursop.egg-info/dependency_links.txt 2022-09-15T22:23:03,513 writing requirements to soursop.egg-info/requires.txt 2022-09-15T22:23:04,100 writing top-level names to soursop.egg-info/top_level.txt 2022-09-15T22:23:04,220 reading manifest file 'soursop.egg-info/SOURCES.txt' 2022-09-15T22:23:04,237 reading manifest template 'MANIFEST.in' 2022-09-15T22:23:04,251 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-09-15T22:23:04,253 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-09-15T22:23:04,254 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-09-15T22:23:04,281 warning: no files found matching '*include' under directory 'soursop/data' 2022-09-15T22:23:04,297 warning: no files found matching 'soursop/_version.py' under directory 'soursop/data' 2022-09-15T22:23:04,298 adding license file 'LICENSE' 2022-09-15T22:23:04,310 writing manifest file 'soursop.egg-info/SOURCES.txt' 2022-09-15T22:23:04,315 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-15T22:23:04,316 ############################ 2022-09-15T22:23:04,316 # Package would be ignored # 2022-09-15T22:23:04,316 ############################ 2022-09-15T22:23:04,317 Python recognizes 'soursop.data' as an importable package, however it is 2022-09-15T22:23:04,317 included in the distribution as "data". 2022-09-15T22:23:04,317 This behavior is likely to change in future versions of setuptools (and 2022-09-15T22:23:04,318 therefore is considered deprecated). 2022-09-15T22:23:04,318 Please make sure that 'soursop.data' is included as a package by using 2022-09-15T22:23:04,319 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-15T22:23:04,319 You can read more about "package discovery" and "data files" on setuptools 2022-09-15T22:23:04,320 documentation page. 2022-09-15T22:23:04,320 !! 2022-09-15T22:23:04,321 check.warn(importable) 2022-09-15T22:23:04,321 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-15T22:23:04,322 ############################ 2022-09-15T22:23:04,323 # Package would be ignored # 2022-09-15T22:23:04,323 ############################ 2022-09-15T22:23:04,323 Python recognizes 'soursop.data.test_data' as an importable package, however it is 2022-09-15T22:23:04,324 included in the distribution as "data". 2022-09-15T22:23:04,324 This behavior is likely to change in future versions of setuptools (and 2022-09-15T22:23:04,324 therefore is considered deprecated). 2022-09-15T22:23:04,325 Please make sure that 'soursop.data.test_data' is included as a package by using 2022-09-15T22:23:04,325 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-15T22:23:04,326 You can read more about "package discovery" and "data files" on setuptools 2022-09-15T22:23:04,326 documentation page. 2022-09-15T22:23:04,327 !! 2022-09-15T22:23:04,328 check.warn(importable) 2022-09-15T22:23:04,328 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-15T22:23:04,329 ############################ 2022-09-15T22:23:04,329 # Package would be ignored # 2022-09-15T22:23:04,329 ############################ 2022-09-15T22:23:04,330 Python recognizes 'soursop.data.test_data.cap_tests' as an importable package, however it is 2022-09-15T22:23:04,330 included in the distribution as "data". 2022-09-15T22:23:04,330 This behavior is likely to change in future versions of setuptools (and 2022-09-15T22:23:04,331 therefore is considered deprecated). 2022-09-15T22:23:04,331 Please make sure that 'soursop.data.test_data.cap_tests' is included as a package by using 2022-09-15T22:23:04,332 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-15T22:23:04,332 You can read more about "package discovery" and "data files" on setuptools 2022-09-15T22:23:04,333 documentation page. 2022-09-15T22:23:04,334 !! 2022-09-15T22:23:04,335 check.warn(importable) 2022-09-15T22:23:04,335 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-15T22:23:04,336 ############################ 2022-09-15T22:23:04,336 # Package would be ignored # 2022-09-15T22:23:04,337 ############################ 2022-09-15T22:23:04,337 Python recognizes 'soursop.data.test_data.gromacs1chain' as an importable package, however it is 2022-09-15T22:23:04,337 included in the distribution as "data". 2022-09-15T22:23:04,338 This behavior is likely to change in future versions of setuptools (and 2022-09-15T22:23:04,338 therefore is considered deprecated). 2022-09-15T22:23:04,339 Please make sure that 'soursop.data.test_data.gromacs1chain' is included as a package by using 2022-09-15T22:23:04,339 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-15T22:23:04,340 You can read more about "package discovery" and "data files" on setuptools 2022-09-15T22:23:04,340 documentation page. 2022-09-15T22:23:04,341 !! 2022-09-15T22:23:04,342 check.warn(importable) 2022-09-15T22:23:04,342 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-15T22:23:04,343 ############################ 2022-09-15T22:23:04,344 # Package would be ignored # 2022-09-15T22:23:04,344 ############################ 2022-09-15T22:23:04,345 Python recognizes 'soursop.data.test_data.gromacs2chains' as an importable package, however it is 2022-09-15T22:23:04,345 included in the distribution as "data". 2022-09-15T22:23:04,345 This behavior is likely to change in future versions of setuptools (and 2022-09-15T22:23:04,346 therefore is considered deprecated). 2022-09-15T22:23:04,346 Please make sure that 'soursop.data.test_data.gromacs2chains' is included as a package by using 2022-09-15T22:23:04,347 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-15T22:23:04,347 You can read more about "package discovery" and "data files" on setuptools 2022-09-15T22:23:04,348 documentation page. 2022-09-15T22:23:04,349 !! 2022-09-15T22:23:04,349 check.warn(importable) 2022-09-15T22:23:04,350 creating build/lib/soursop/.ipynb_checkpoints 2022-09-15T22:23:04,351 copying soursop/.ipynb_checkpoints/Untitled-checkpoint.ipynb -> build/lib/soursop/.ipynb_checkpoints 2022-09-15T22:23:04,351 creating build/lib/soursop/data 2022-09-15T22:23:04,351 copying soursop/data/SASA_SUMMARY.csv -> build/lib/soursop/data 2022-09-15T22:23:04,352 copying soursop/data/bbseg2.dat -> build/lib/soursop/data 2022-09-15T22:23:04,352 creating build/lib/soursop/data/test_data 2022-09-15T22:23:04,353 copying soursop/data/test_data/all_residues.pdb -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,354 copying soursop/data/test_data/all_residues.xtc -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,359 copying soursop/data/test_data/gs6.dcd -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,363 copying soursop/data/test_data/gs6.pdb -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,367 copying soursop/data/test_data/gs6.xtc -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,371 copying soursop/data/test_data/gs6_invalid_r1.pdb -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,376 copying soursop/data/test_data/ntl9.dcd -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,388 copying soursop/data/test_data/ntl9.pdb -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,397 copying soursop/data/test_data/ntl9.xtc -> build/lib/soursop/data/test_data 2022-09-15T22:23:04,403 creating build/lib/soursop/data/test_data/.ipynb_checkpoints 2022-09-15T22:23:04,404 copying soursop/data/test_data/.ipynb_checkpoints/Untitled-checkpoint.ipynb -> build/lib/soursop/data/test_data/.ipynb_checkpoints 2022-09-15T22:23:04,408 creating build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,410 copying soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,414 copying soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,418 copying soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,422 copying soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,427 copying soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,432 copying soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,437 copying soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,441 copying soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,446 copying soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,451 copying soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,456 copying soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,460 copying soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,465 copying soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,469 copying soursop/data/test_data/cap_tests/__START.pdb -> build/lib/soursop/data/test_data/cap_tests 2022-09-15T22:23:04,473 creating build/lib/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:04,474 copying soursop/data/test_data/gromacs1chain/top.pdb -> build/lib/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:04,483 copying soursop/data/test_data/gromacs1chain/traj.xtc -> build/lib/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:04,492 creating build/lib/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:04,494 copying soursop/data/test_data/gromacs2chains/top.pdb -> build/lib/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:04,503 copying soursop/data/test_data/gromacs2chains/traj.xtc -> build/lib/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:04,524 UPDATING build/lib/soursop/_version.py 2022-09-15T22:23:04,526 set build/lib/soursop/_version.py to 'v0.2.1' 2022-09-15T22:23:05,233 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-09-15T22:23:05,234 setuptools.SetuptoolsDeprecationWarning, 2022-09-15T22:23:05,942 installing to build/bdist.linux-armv7l/wheel 2022-09-15T22:23:05,943 running install 2022-09-15T22:23:06,004 running install_lib 2022-09-15T22:23:06,709 creating build/bdist.linux-armv7l 2022-09-15T22:23:06,709 creating build/bdist.linux-armv7l/wheel 2022-09-15T22:23:06,713 creating build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,714 copying build/lib/soursop/_internal_data.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,720 copying build/lib/soursop/ssprotein.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,736 copying build/lib/soursop/soursop.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,741 creating build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,743 copying build/lib/soursop/tests/test_soursop.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,747 copying build/lib/soursop/tests/test_ssnmr.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,752 copying build/lib/soursop/tests/conftest.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,755 copying build/lib/soursop/tests/test_sstrajectory.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,761 copying build/lib/soursop/tests/test_ssproteins.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,767 copying build/lib/soursop/tests/test_numbering.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,771 copying build/lib/soursop/tests/test_ssmutual_information.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,775 copying build/lib/soursop/tests/test_caps.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,779 copying build/lib/soursop/tests/__init__.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,782 copying build/lib/soursop/tests/test_ssnmr_extended.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,786 copying build/lib/soursop/tests/test_ssutils.py -> build/bdist.linux-armv7l/wheel/soursop/tests 2022-09-15T22:23:06,790 copying build/lib/soursop/ssutils.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,794 copying build/lib/soursop/sspolymer.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,798 copying build/lib/soursop/ssdata.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,802 copying build/lib/soursop/sstools.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,807 creating build/bdist.linux-armv7l/wheel/soursop/data 2022-09-15T22:23:06,809 copying build/lib/soursop/data/SASA_SUMMARY.csv -> build/bdist.linux-armv7l/wheel/soursop/data 2022-09-15T22:23:06,813 copying build/lib/soursop/data/bbseg2.dat -> build/bdist.linux-armv7l/wheel/soursop/data 2022-09-15T22:23:06,817 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,819 copying build/lib/soursop/data/test_data/gs6_invalid_r1.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,824 copying build/lib/soursop/data/test_data/ntl9.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,833 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:06,835 copying build/lib/soursop/data/test_data/gromacs1chain/top.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:06,844 copying build/lib/soursop/data/test_data/gromacs1chain/traj.xtc -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs1chain 2022-09-15T22:23:06,854 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,855 copying build/lib/soursop/data/test_data/cap_tests/FOR_UCAP.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,860 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NME.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,864 copying build/lib/soursop/data/test_data/cap_tests/FOR_NH2.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,868 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_1.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,871 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,875 copying build/lib/soursop/data/test_data/cap_tests/ACE_NH2.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,880 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,884 copying build/lib/soursop/data/test_data/cap_tests/FOR_NME.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,888 copying build/lib/soursop/data/test_data/cap_tests/ACE_UCAP.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,892 copying build/lib/soursop/data/test_data/cap_tests/UCAP_UCAP.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,896 copying build/lib/soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,901 copying build/lib/soursop/data/test_data/cap_tests/__START.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,905 copying build/lib/soursop/data/test_data/cap_tests/ACD_start_10.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,908 copying build/lib/soursop/data/test_data/cap_tests/UCAP_NH2.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/cap_tests 2022-09-15T22:23:06,912 copying build/lib/soursop/data/test_data/all_residues.xtc -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,917 copying build/lib/soursop/data/test_data/all_residues.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,922 copying build/lib/soursop/data/test_data/ntl9.dcd -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,933 copying build/lib/soursop/data/test_data/ntl9.xtc -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,940 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:06,942 copying build/lib/soursop/data/test_data/gromacs2chains/top.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:06,951 copying build/lib/soursop/data/test_data/gromacs2chains/traj.xtc -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/gromacs2chains 2022-09-15T22:23:06,961 creating build/bdist.linux-armv7l/wheel/soursop/data/test_data/.ipynb_checkpoints 2022-09-15T22:23:06,963 copying build/lib/soursop/data/test_data/.ipynb_checkpoints/Untitled-checkpoint.ipynb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data/.ipynb_checkpoints 2022-09-15T22:23:06,967 copying build/lib/soursop/data/test_data/gs6.pdb -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,971 copying build/lib/soursop/data/test_data/gs6.xtc -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,975 copying build/lib/soursop/data/test_data/gs6.dcd -> build/bdist.linux-armv7l/wheel/soursop/data/test_data 2022-09-15T22:23:06,979 copying build/lib/soursop/ssexceptions.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,983 copying build/lib/soursop/_version.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,987 copying build/lib/soursop/sssampling.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,991 copying build/lib/soursop/sspre.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:06,996 copying build/lib/soursop/ssio.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,000 copying build/lib/soursop/ssnmr.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,005 copying build/lib/soursop/ssmutualinformation.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,010 copying build/lib/soursop/configs.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,014 copying build/lib/soursop/__init__.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,019 creating build/bdist.linux-armv7l/wheel/soursop/.ipynb_checkpoints 2022-09-15T22:23:07,021 copying build/lib/soursop/.ipynb_checkpoints/Untitled-checkpoint.ipynb -> build/bdist.linux-armv7l/wheel/soursop/.ipynb_checkpoints 2022-09-15T22:23:07,025 copying build/lib/soursop/sstrajectory.py -> build/bdist.linux-armv7l/wheel/soursop 2022-09-15T22:23:07,031 running install_egg_info 2022-09-15T22:23:07,751 Copying soursop.egg-info to build/bdist.linux-armv7l/wheel/soursop-0.2.1-py3.7.egg-info 2022-09-15T22:23:07,772 running install_scripts 2022-09-15T22:23:07,930 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-15T22:23:07,939 creating build/bdist.linux-armv7l/wheel/soursop-0.2.1.dist-info/WHEEL 2022-09-15T22:23:07,945 creating '/tmp/pip-wheel-7gnl5o9q/soursop-0.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-15T22:23:07,951 adding 'soursop/__init__.py' 2022-09-15T22:23:07,955 adding 'soursop/_internal_data.py' 2022-09-15T22:23:07,958 adding 'soursop/_version.py' 2022-09-15T22:23:07,961 adding 'soursop/configs.py' 2022-09-15T22:23:07,964 adding 'soursop/soursop.py' 2022-09-15T22:23:07,967 adding 'soursop/ssdata.py' 2022-09-15T22:23:07,970 adding 'soursop/ssexceptions.py' 2022-09-15T22:23:07,973 adding 'soursop/ssio.py' 2022-09-15T22:23:07,977 adding 'soursop/ssmutualinformation.py' 2022-09-15T22:23:07,987 adding 'soursop/ssnmr.py' 2022-09-15T22:23:07,991 adding 'soursop/sspolymer.py' 2022-09-15T22:23:07,996 adding 'soursop/sspre.py' 2022-09-15T22:23:08,058 adding 'soursop/ssprotein.py' 2022-09-15T22:23:08,066 adding 'soursop/sssampling.py' 2022-09-15T22:23:08,069 adding 'soursop/sstools.py' 2022-09-15T22:23:08,082 adding 'soursop/sstrajectory.py' 2022-09-15T22:23:08,087 adding 'soursop/ssutils.py' 2022-09-15T22:23:08,091 adding 'soursop/.ipynb_checkpoints/Untitled-checkpoint.ipynb' 2022-09-15T22:23:08,095 adding 'soursop/data/SASA_SUMMARY.csv' 2022-09-15T22:23:08,098 adding 'soursop/data/bbseg2.dat' 2022-09-15T22:23:08,108 adding 'soursop/data/test_data/all_residues.pdb' 2022-09-15T22:23:08,114 adding 'soursop/data/test_data/all_residues.xtc' 2022-09-15T22:23:08,118 adding 'soursop/data/test_data/gs6.dcd' 2022-09-15T22:23:08,122 adding 'soursop/data/test_data/gs6.pdb' 2022-09-15T22:23:08,125 adding 'soursop/data/test_data/gs6.xtc' 2022-09-15T22:23:08,129 adding 'soursop/data/test_data/gs6_invalid_r1.pdb' 2022-09-15T22:23:08,190 adding 'soursop/data/test_data/ntl9.dcd' 2022-09-15T22:23:08,220 adding 'soursop/data/test_data/ntl9.pdb' 2022-09-15T22:23:08,233 adding 'soursop/data/test_data/ntl9.xtc' 2022-09-15T22:23:08,238 adding 'soursop/data/test_data/.ipynb_checkpoints/Untitled-checkpoint.ipynb' 2022-09-15T22:23:08,243 adding 'soursop/data/test_data/cap_tests/ACD_start_1.pdb' 2022-09-15T22:23:08,246 adding 'soursop/data/test_data/cap_tests/ACD_start_10.pdb' 2022-09-15T22:23:08,250 adding 'soursop/data/test_data/cap_tests/ACE_NH2.pdb' 2022-09-15T22:23:08,254 adding 'soursop/data/test_data/cap_tests/ACE_NME.pdb' 2022-09-15T22:23:08,261 adding 'soursop/data/test_data/cap_tests/ACE_NME_multichain.pdb' 2022-09-15T22:23:08,265 adding 'soursop/data/test_data/cap_tests/ACE_NME_start_at_5.pdb' 2022-09-15T22:23:08,269 adding 'soursop/data/test_data/cap_tests/ACE_UCAP.pdb' 2022-09-15T22:23:08,273 adding 'soursop/data/test_data/cap_tests/FOR_NH2.pdb' 2022-09-15T22:23:08,277 adding 'soursop/data/test_data/cap_tests/FOR_NME.pdb' 2022-09-15T22:23:08,280 adding 'soursop/data/test_data/cap_tests/FOR_UCAP.pdb' 2022-09-15T22:23:08,284 adding 'soursop/data/test_data/cap_tests/UCAP_NH2.pdb' 2022-09-15T22:23:08,288 adding 'soursop/data/test_data/cap_tests/UCAP_NME.pdb' 2022-09-15T22:23:08,292 adding 'soursop/data/test_data/cap_tests/UCAP_UCAP.pdb' 2022-09-15T22:23:08,295 adding 'soursop/data/test_data/cap_tests/__START.pdb' 2022-09-15T22:23:08,324 adding 'soursop/data/test_data/gromacs1chain/top.pdb' 2022-09-15T22:23:08,348 adding 'soursop/data/test_data/gromacs1chain/traj.xtc' 2022-09-15T22:23:08,380 adding 'soursop/data/test_data/gromacs2chains/top.pdb' 2022-09-15T22:23:08,405 adding 'soursop/data/test_data/gromacs2chains/traj.xtc' 2022-09-15T22:23:08,411 adding 'soursop/tests/__init__.py' 2022-09-15T22:23:08,415 adding 'soursop/tests/conftest.py' 2022-09-15T22:23:08,418 adding 'soursop/tests/test_caps.py' 2022-09-15T22:23:08,421 adding 'soursop/tests/test_numbering.py' 2022-09-15T22:23:08,424 adding 'soursop/tests/test_soursop.py' 2022-09-15T22:23:08,427 adding 'soursop/tests/test_ssmutual_information.py' 2022-09-15T22:23:08,431 adding 'soursop/tests/test_ssnmr.py' 2022-09-15T22:23:08,434 adding 'soursop/tests/test_ssnmr_extended.py' 2022-09-15T22:23:08,443 adding 'soursop/tests/test_ssproteins.py' 2022-09-15T22:23:08,450 adding 'soursop/tests/test_sstrajectory.py' 2022-09-15T22:23:08,453 adding 'soursop/tests/test_ssutils.py' 2022-09-15T22:23:08,460 adding 'soursop-0.2.1.dist-info/LICENSE' 2022-09-15T22:23:08,463 adding 'soursop-0.2.1.dist-info/METADATA' 2022-09-15T22:23:08,465 adding 'soursop-0.2.1.dist-info/WHEEL' 2022-09-15T22:23:08,468 adding 'soursop-0.2.1.dist-info/top_level.txt' 2022-09-15T22:23:08,470 adding 'soursop-0.2.1.dist-info/RECORD' 2022-09-15T22:23:08,491 removing build/bdist.linux-armv7l/wheel 2022-09-15T22:23:08,798 Building wheel for soursop (setup.py): finished with status 'done' 2022-09-15T22:23:08,819 Created wheel for soursop: filename=soursop-0.2.1-py3-none-any.whl size=461240 sha256=a02cbaf07bdd2b38a4e83593f9c40be1ba59b43ed30a580a0cab670406fe4cc3 2022-09-15T22:23:08,821 Stored in directory: /tmp/pip-ephem-wheel-cache-7bbstd8p/wheels/3a/3f/46/da27e9da0064484a3becbf1595176f3f81a4b22c4420c071e7 2022-09-15T22:23:08,851 Successfully built soursop 2022-09-15T22:23:08,894 Removed build tracker: '/tmp/pip-build-tracker-a0u34s39'