2022-09-16T16:13:28,485 Created temporary directory: /tmp/pip-ephem-wheel-cache-8lsx4iac
2022-09-16T16:13:28,491 Created temporary directory: /tmp/pip-build-tracker-e07o_usu
2022-09-16T16:13:28,492 Initialized build tracking at /tmp/pip-build-tracker-e07o_usu
2022-09-16T16:13:28,493 Created build tracker: /tmp/pip-build-tracker-e07o_usu
2022-09-16T16:13:28,493 Entered build tracker: /tmp/pip-build-tracker-e07o_usu
2022-09-16T16:13:28,494 Created temporary directory: /tmp/pip-wheel-an9sh8tg
2022-09-16T16:13:28,560 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-09-16T16:13:28,568 2 location(s) to search for versions of cvi:
2022-09-16T16:13:28,568 * https://pypi.org/simple/cvi/
2022-09-16T16:13:28,568 * https://www.piwheels.org/simple/cvi/
2022-09-16T16:13:28,570 Fetching project page and analyzing links: https://pypi.org/simple/cvi/
2022-09-16T16:13:28,571 Getting page https://pypi.org/simple/cvi/
2022-09-16T16:13:28,575 Found index url https://pypi.org/simple
2022-09-16T16:13:28,779   Skipping link: No binaries permitted for cvi: https://files.pythonhosted.org/packages/d9/40/a81a72ef45bf5dcd7ee12fd4e521b20050e46f8f95e6cc08ad895e79d35b/cvi-0.1.0a1-py3-none-any.whl#sha256=7e877b129300c82100b1c97ab4e07799a6f6f8f691b9bdd04d569339b082d302 (from https://pypi.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:28,781   Found link https://files.pythonhosted.org/packages/15/63/c98fc65fb527bf3c326122ac38adf2f99075db7e65b62e15c1f2e06ae63e/cvi-0.1.0a1.tar.gz#sha256=a5ceb4d5e0aaa6cffb73a85dabf0fafd8e53596c960af96660c8d86dad39d4cf (from https://pypi.org/simple/cvi/) (requires-python:>=3.6), version: 0.1.0a1
2022-09-16T16:13:28,782   Skipping link: No binaries permitted for cvi: https://files.pythonhosted.org/packages/a6/26/f61a6400e5756141b96f426c713eab9130857c53b76b13b1b4e1be3563ee/cvi-0.1.0a2-py3-none-any.whl#sha256=414fff40901f34feaf8b41d0518ecdddfce2642a1580efcce0fff4f9abe71123 (from https://pypi.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:28,783   Found link https://files.pythonhosted.org/packages/0a/92/7dca8984b7158ac5b286ad7af4379960075bf8434c53e4a1e3a49f0e5cf0/cvi-0.1.0a2.tar.gz#sha256=716a4a99992c8d41c9649831b53d638474d7c1b5fe3ede22440cda817aefaefa (from https://pypi.org/simple/cvi/) (requires-python:>=3.6), version: 0.1.0a2
2022-09-16T16:13:28,784   Skipping link: No binaries permitted for cvi: https://files.pythonhosted.org/packages/26/e0/07beb00e46f3d00b2fd106c0884111e445dc15e87bcab4eb7444d8a5be8e/cvi-0.1.0a3-py3-none-any.whl#sha256=c93c63471308195e78b854e3ad1e896a46efcdf44af044eaf21f789c9f3a44bb (from https://pypi.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:28,785   Found link https://files.pythonhosted.org/packages/83/38/17e2d7569d5c565643e0ebd63f62071c43dd1a96cde5719066c6ec4455c9/cvi-0.1.0a3.tar.gz#sha256=2d8f9946ea904ed06b75fba150f6ccdf3663e6a47f7df3e346e6896b0b198dba (from https://pypi.org/simple/cvi/) (requires-python:>=3.6), version: 0.1.0a3
2022-09-16T16:13:28,786   Skipping link: No binaries permitted for cvi: https://files.pythonhosted.org/packages/72/42/353ccfab1cfdb5d7e0cda90e5a9cb4d3dd24932a153fd3b466e8891ea793/cvi-0.1.0a4-py3-none-any.whl#sha256=53f03da20832bbdad26e2adc6f65323908ef19b82171e451a0cc677f5ea419ef (from https://pypi.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:28,787   Found link https://files.pythonhosted.org/packages/91/6f/fa2f196409f1c29910f5e3168d25240004b9277ea75f042c60dcf621c99b/cvi-0.1.0a4.tar.gz#sha256=e5c42aba908237e8c6f7b047b3873012cd6f726943f18913e6caad62e7399b8a (from https://pypi.org/simple/cvi/) (requires-python:>=3.6), version: 0.1.0a4
2022-09-16T16:13:28,788 Fetching project page and analyzing links: https://www.piwheels.org/simple/cvi/
2022-09-16T16:13:28,789 Getting page https://www.piwheels.org/simple/cvi/
2022-09-16T16:13:28,791 Found index url https://www.piwheels.org/simple
2022-09-16T16:13:29,017   Skipping link: No binaries permitted for cvi: https://www.piwheels.org/simple/cvi/cvi-0.1.0a3-py3-none-any.whl#sha256=bb395c30ea5296b3868487281bdbe627dc964ce445bd373fdb2da96cc5f3816f (from https://www.piwheels.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:29,018   Skipping link: No binaries permitted for cvi: https://www.piwheels.org/simple/cvi/cvi-0.1.0a2-py3-none-any.whl#sha256=a998d2e799675b32bbeb3f318b8fde028492384f668cebb508490f8301db46d2 (from https://www.piwheels.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:29,019   Skipping link: No binaries permitted for cvi: https://www.piwheels.org/simple/cvi/cvi-0.1.0a1-py3-none-any.whl#sha256=39f62718e2c3fcfa9defdf829d0a94f402dee719ea66a6a6f11de8095de1f43f (from https://www.piwheels.org/simple/cvi/) (requires-python:>=3.6)
2022-09-16T16:13:29,019 Skipping link: not a file: https://www.piwheels.org/simple/cvi/
2022-09-16T16:13:29,020 Skipping link: not a file: https://pypi.org/simple/cvi/
2022-09-16T16:13:29,055 Given no hashes to check 1 links for project 'cvi': discarding no candidates
2022-09-16T16:13:29,087 Collecting cvi==0.1.0a4
2022-09-16T16:13:29,091   Created temporary directory: /tmp/pip-unpack-2ar3u86a
2022-09-16T16:13:29,577   Downloading cvi-0.1.0a4.tar.gz (13 kB)
2022-09-16T16:13:29,687   Added cvi==0.1.0a4 from https://files.pythonhosted.org/packages/91/6f/fa2f196409f1c29910f5e3168d25240004b9277ea75f042c60dcf621c99b/cvi-0.1.0a4.tar.gz#sha256=e5c42aba908237e8c6f7b047b3873012cd6f726943f18913e6caad62e7399b8a to build tracker '/tmp/pip-build-tracker-e07o_usu'
2022-09-16T16:13:29,694   Created temporary directory: /tmp/pip-build-env-xx8pqerj
2022-09-16T16:13:29,709   Created temporary directory: /tmp/pip-standalone-pip-pdvtm7pt
2022-09-16T16:13:32,143   Installing build dependencies: started
2022-09-16T16:13:32,145   Running command pip subprocess to install build dependencies
2022-09-16T16:13:41,832   Using pip 22.1.2 from /tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip (python 3.7)
2022-09-16T16:13:44,064   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-09-16T16:13:48,309   Collecting setuptools>=42
2022-09-16T16:13:48,593     Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.3.0-py3-none-any.whl (1.2 MB)
2022-09-16T16:14:00,890   Installing collected packages: setuptools
2022-09-16T16:14:05,818   Successfully installed setuptools-65.3.0
2022-09-16T16:14:06,064   --- Logging error ---
2022-09-16T16:14:06,064   Traceback (most recent call last):
2022-09-16T16:14:06,065     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit
2022-09-16T16:14:06,065       self.console.print(renderable, overflow="ignore", crop=False, style=style)
2022-09-16T16:14:06,066     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print
2022-09-16T16:14:06,066       extend(render(renderable, render_options))
2022-09-16T16:14:06,066     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render
2022-09-16T16:14:06,067       for render_output in iter_render:
2022-09-16T16:14:06,067     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__
2022-09-16T16:14:06,068       for line in lines:
2022-09-16T16:14:06,068     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines
2022-09-16T16:14:06,068       for segment in segments:
2022-09-16T16:14:06,069     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render
2022-09-16T16:14:06,069       renderable = rich_cast(renderable)
2022-09-16T16:14:06,069     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast
2022-09-16T16:14:06,070       renderable = cast_method()
2022-09-16T16:14:06,070     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__
2022-09-16T16:14:06,070       pip_cmd = get_best_invocation_for_this_pip()
2022-09-16T16:14:06,071     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip
2022-09-16T16:14:06,071       os.path.join(binary_prefix, exe_name),
2022-09-16T16:14:06,071     File "/usr/lib/python3.7/genericpath.py", line 97, in samefile
2022-09-16T16:14:06,072       s2 = os.stat(f2)
2022-09-16T16:14:06,072   FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7'
2022-09-16T16:14:06,072   Call stack:
2022-09-16T16:14:06,073     File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main
2022-09-16T16:14:06,073       "__main__", mod_spec)
2022-09-16T16:14:06,073     File "/usr/lib/python3.7/runpy.py", line 85, in _run_code
2022-09-16T16:14:06,074       exec(code, run_globals)
2022-09-16T16:14:06,074     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/__main__.py", line 31, in <module>
2022-09-16T16:14:06,074       sys.exit(_main())
2022-09-16T16:14:06,075     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main
2022-09-16T16:14:06,075       return command.main(cmd_args)
2022-09-16T16:14:06,075     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main
2022-09-16T16:14:06,076       return self._main(args)
2022-09-16T16:14:06,076     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main
2022-09-16T16:14:06,076       self.handle_pip_version_check(options)
2022-09-16T16:14:06,077     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check
2022-09-16T16:14:06,077       pip_self_version_check(session, options)
2022-09-16T16:14:06,077     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check
2022-09-16T16:14:06,078       logger.info("[present-rich] %s", upgrade_prompt)
2022-09-16T16:14:06,078     File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info
2022-09-16T16:14:06,078       self._log(INFO, msg, args, **kwargs)
2022-09-16T16:14:06,079     File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log
2022-09-16T16:14:06,079       self.handle(record)
2022-09-16T16:14:06,080     File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle
2022-09-16T16:14:06,080       self.callHandlers(record)
2022-09-16T16:14:06,080     File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers
2022-09-16T16:14:06,081       hdlr.handle(record)
2022-09-16T16:14:06,081     File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle
2022-09-16T16:14:06,081       self.emit(record)
2022-09-16T16:14:06,082     File "/tmp/pip-standalone-pip-pdvtm7pt/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit
2022-09-16T16:14:06,082       self.handleError(record)
2022-09-16T16:14:06,082   Message: '[present-rich] %s'
2022-09-16T16:14:06,083   Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),)
2022-09-16T16:14:06,578   Installing build dependencies: finished with status 'done'
2022-09-16T16:14:06,604   Getting requirements to build wheel: started
2022-09-16T16:14:06,607   Running command Getting requirements to build wheel
2022-09-16T16:14:11,072   /usr/local/lib/python3.7/dist-packages/setuptools/config/pyprojecttoml.py:102: _ExperimentalProjectMetadata: Support for project metadata in `pyproject.toml` is still experimental and may be removed (or change) in future releases.
2022-09-16T16:14:11,073     warnings.warn(msg, _ExperimentalProjectMetadata)
2022-09-16T16:14:11,073   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:11,075       ##########################################################################
2022-09-16T16:14:11,075       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:11,075       ##########################################################################

2022-09-16T16:14:11,076       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:11,077       `readme = "# cvi\n\nA Python package implementing both batch and incremental cluster validity indices (CVIs).\n\n| **Stable Docs**  | **Dev Docs** | **Build Status** | **Coverage** |\n|:----------------:|:------------:|:----------------:|:------------:|\n| [![Stable][docs-stable-img]][docs-stable-url] | [![Dev][docs-dev-img]][docs-dev-url]| [![Build Status][ci-img]][ci-url] | [![Codecov][codecov-img]][codecov-url] |\n| **Version** | **Issues** | **Commits** | **Commits Since Release**\n| [![version][version-img]][version-url] | [![issues][issues-img]][issues-url] | [![commits][commits-img]][commits-url] | [![compare][compare-img]][compare-url] |\n\n<!-- | **Zenodo DOI** |\n| :------------: |\n| [![DOI][zenodo-img]][zenodo-url] | -->\n\n[docs-stable-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=latest\n[docs-stable-url]: https://cluster-validity-indices.readthedocs.io/en/latest/?badge=latest\n\n[docs-dev-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=develop\n[docs-dev-url]: https://cluster-validity-indices.readthedocs.io/en/develop/?badge=develop\n\n[ci-img]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml/badge.svg\n[ci-url]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml\n\n[codecov-img]: https://codecov.io/gh/AP6YC/cvi/branch/main/graph/badge.svg\n[codecov-url]: https://codecov.io/gh/AP6YC/cvi\n\n[version-img]: https://img.shields.io/pypi/v/cvi.svg\n[version-url]: https://pypi.org/project/cvi\n\n[issues-img]: https://img.shields.io/github/issues/AP6YC/cvi?style=flat\n[issues-url]: https://github.com/AP6YC/cvi/issues\n\n[commits-img]: https://img.shields.io/github/commit-activity/m/AP6YC/cvi?style=flat\n[commits-url]: https://github.com/AP6YC/cvi/commits/main\n\n[compare-img]: https://img.shields.io/github/commits-since/AP6YC/cvi/latest/develop\n[compare-url]: https://github.com/AP6YC/cvi/compare/v0.1.0-alpha.4...develop\n\n## Table of Contents\n\n- [cvi](#cvi)\n  - [Table of Contents](#table-of-contents)\n  - [Cluster Validity Indices](#cluster-validity-indices)\n  - [Installation](#installation)\n  - [Usage](#usage)\n  - [History](#history)\n  - [Acknowledgements](#acknowledgements)\n  - [Related Projects](#related-projects)\n\n## Cluster Validity Indices\n\nSay you have a clustering algorithm that clusters a set of samples containing features of some kind and some dimensionality.\nGreat!\nThat was a lot of work, and you should feel accomplished.\nBut how do you know that the algorithm performed _well_?\nBy definition, you wouldn't have the _true_ label belonging to each sample (if one could even exist in your context), just the label prescribed by your clustering algorithm.\n\n**Enter Cluster Validity Indices (CVIs)**.\n\nCVIs are metrics of cluster partitioning when true cluster labels are unavailable.\nEach operates on only the information available (i.e., the provided samples of features and the labels prescribed by the clustering algorithm) and produces a _metric_, a number that goes up or down according to how well the CVI believes the clustering algorithm appears to, well, _cluster_.\nClustering well in this context means correctly partitioning (i.e., separating) the data rather than prescribing too many different clusters (over partitioning) or too few (under partitioning)\nEvery CVI itself also behaves differently in terms of the range and scale of their numbers.\n**Furthermore, each CVI has an original batch implementation and incremental implementation that are equivalent**.\n\nThe `cvi` Python package contains a variety of these batch and incremental CVIs.\n\n## Installation\n\nThe `cvi` package is listed on PyPi, so you may install the latest version with\n\n```python\npip install cvi\n```\n\nYou can also specify a version to install in the usual way with\n\n```python\npip install cvi==v0.1.0-alpha.2\n```\n\nAlternatively, you can manually install a release from the [releases page](https://github.com/AP6YC/cvi/releases) on GitHub.\n\n## Usage\n\nTODO\n\n## History\n\n- 8/18/2022: Initialize project.\n- 9/8/2022: First release on PyPi and initiate GitFlow.\n\n## Acknowledgements\n\nThe incremental and batch CVI implementations in this package are largely derived from the following Julia language implementations:\n\n- https://github.com/AP6YC/ClusterValidityIndices.jl\n\nThe principal authors of the `cvi` pacakge are:\n\n- Sasha Petrenko <sap625@mst.edu>\n- Nik Melton <nmmz76@mst.edu>\n\n## Related Projects\n\nIf this package is missing something that you need, feel free to check out some related Python cluster validity packages:\n\n- [validclust](https://github.com/crew102/validclust)\n- [clusterval](https://github.com/Nuno09/clusterval)\n"`

2022-09-16T16:14:11,078       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:11,079       consider this value unless 'readme' is listed as `dynamic`.

2022-09-16T16:14:11,079       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:11,080       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:11,081       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:11,081       follow strictly the standard.

2022-09-16T16:14:11,082       To prevent this warning, you can list 'readme' under `dynamic` or alternatively
2022-09-16T16:14:11,082       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:11,082       configuration.


2022-09-16T16:14:11,084   !!

2022-09-16T16:14:11,084     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:11,085   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:11,086       ##########################################################################
2022-09-16T16:14:11,086       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:11,087       ##########################################################################

2022-09-16T16:14:11,087       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:11,088       `requires-python = <SpecifierSet('>=3.6')>`

2022-09-16T16:14:11,089       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:11,089       consider this value unless 'requires-python' is listed as `dynamic`.

2022-09-16T16:14:11,090       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:11,090       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:11,091       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:11,091       follow strictly the standard.

2022-09-16T16:14:11,092       To prevent this warning, you can list 'requires-python' under `dynamic` or alternatively
2022-09-16T16:14:11,092       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:11,093       configuration.


2022-09-16T16:14:11,094   !!

2022-09-16T16:14:11,094     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:11,095   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:11,096       ##########################################################################
2022-09-16T16:14:11,096       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:11,096       ##########################################################################

2022-09-16T16:14:11,097       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:11,098       `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent']`

2022-09-16T16:14:11,098       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:11,098       consider this value unless 'classifiers' is listed as `dynamic`.

2022-09-16T16:14:11,099       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:11,100       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:11,100       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:11,101       follow strictly the standard.

2022-09-16T16:14:11,101       To prevent this warning, you can list 'classifiers' under `dynamic` or alternatively
2022-09-16T16:14:11,102       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:11,102       configuration.


2022-09-16T16:14:11,103   !!

2022-09-16T16:14:11,104     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:12,704   running egg_info
2022-09-16T16:14:13,347   writing src/cvi.egg-info/PKG-INFO
2022-09-16T16:14:13,956   writing dependency_links to src/cvi.egg-info/dependency_links.txt
2022-09-16T16:14:16,971   writing requirements to src/cvi.egg-info/requires.txt
2022-09-16T16:14:17,575   writing top-level names to src/cvi.egg-info/top_level.txt
2022-09-16T16:14:18,294   reading manifest file 'src/cvi.egg-info/SOURCES.txt'
2022-09-16T16:14:18,299   adding license file 'LICENSE'
2022-09-16T16:14:18,304   writing manifest file 'src/cvi.egg-info/SOURCES.txt'
2022-09-16T16:14:18,308   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:18,310       ##########################################################################
2022-09-16T16:14:18,310       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:18,311       ##########################################################################

2022-09-16T16:14:18,312       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:18,313       `urls = {'Bug Tracker': 'https://github.com/AP6YC/cvi/issues', 'Documentation': 'https://cluster-validity-indices.readthedocs.io/'}`

2022-09-16T16:14:18,314       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:18,314       consider this value unless 'urls' is listed as `dynamic`.

2022-09-16T16:14:18,315       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:18,316       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:18,317       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:18,317       follow strictly the standard.

2022-09-16T16:14:18,318       To prevent this warning, you can list 'urls' under `dynamic` or alternatively
2022-09-16T16:14:18,319       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:18,319       configuration.


2022-09-16T16:14:18,321   !!

2022-09-16T16:14:18,321     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:18,614   Getting requirements to build wheel: finished with status 'done'
2022-09-16T16:14:18,640   Created temporary directory: /tmp/pip-standalone-pip-180ljc1v
2022-09-16T16:14:21,043   Installing backend dependencies: started
2022-09-16T16:14:21,045   Running command pip subprocess to install backend dependencies
2022-09-16T16:14:30,774   Using pip 22.1.2 from /tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip (python 3.7)
2022-09-16T16:14:32,982   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-09-16T16:14:33,860   Collecting wheel
2022-09-16T16:14:33,896     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB)
2022-09-16T16:14:45,300   Installing collected packages: wheel
2022-09-16T16:14:45,585     Creating /tmp/pip-build-env-xx8pqerj/normal/bin
2022-09-16T16:14:45,590     changing mode of /tmp/pip-build-env-xx8pqerj/normal/bin/wheel to 755
2022-09-16T16:14:45,617   Successfully installed wheel-0.37.1
2022-09-16T16:14:45,864   --- Logging error ---
2022-09-16T16:14:45,865   Traceback (most recent call last):
2022-09-16T16:14:45,865     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit
2022-09-16T16:14:45,865       self.console.print(renderable, overflow="ignore", crop=False, style=style)
2022-09-16T16:14:45,866     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print
2022-09-16T16:14:45,866       extend(render(renderable, render_options))
2022-09-16T16:14:45,867     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render
2022-09-16T16:14:45,867       for render_output in iter_render:
2022-09-16T16:14:45,867     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__
2022-09-16T16:14:45,868       for line in lines:
2022-09-16T16:14:45,868     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines
2022-09-16T16:14:45,868       for segment in segments:
2022-09-16T16:14:45,869     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render
2022-09-16T16:14:45,869       renderable = rich_cast(renderable)
2022-09-16T16:14:45,869     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast
2022-09-16T16:14:45,870       renderable = cast_method()
2022-09-16T16:14:45,870     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__
2022-09-16T16:14:45,870       pip_cmd = get_best_invocation_for_this_pip()
2022-09-16T16:14:45,871     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip
2022-09-16T16:14:45,871       os.path.join(binary_prefix, exe_name),
2022-09-16T16:14:45,871     File "/usr/lib/python3.7/genericpath.py", line 97, in samefile
2022-09-16T16:14:45,872       s2 = os.stat(f2)
2022-09-16T16:14:45,872   FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7'
2022-09-16T16:14:45,872   Call stack:
2022-09-16T16:14:45,873     File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main
2022-09-16T16:14:45,873       "__main__", mod_spec)
2022-09-16T16:14:45,873     File "/usr/lib/python3.7/runpy.py", line 85, in _run_code
2022-09-16T16:14:45,874       exec(code, run_globals)
2022-09-16T16:14:45,874     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/__main__.py", line 31, in <module>
2022-09-16T16:14:45,874       sys.exit(_main())
2022-09-16T16:14:45,875     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main
2022-09-16T16:14:45,875       return command.main(cmd_args)
2022-09-16T16:14:45,875     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main
2022-09-16T16:14:45,876       return self._main(args)
2022-09-16T16:14:45,876     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main
2022-09-16T16:14:45,876       self.handle_pip_version_check(options)
2022-09-16T16:14:45,877     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check
2022-09-16T16:14:45,877       pip_self_version_check(session, options)
2022-09-16T16:14:45,877     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check
2022-09-16T16:14:45,878       logger.info("[present-rich] %s", upgrade_prompt)
2022-09-16T16:14:45,878     File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info
2022-09-16T16:14:45,878       self._log(INFO, msg, args, **kwargs)
2022-09-16T16:14:45,879     File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log
2022-09-16T16:14:45,879       self.handle(record)
2022-09-16T16:14:45,879     File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle
2022-09-16T16:14:45,880       self.callHandlers(record)
2022-09-16T16:14:45,880     File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers
2022-09-16T16:14:45,881       hdlr.handle(record)
2022-09-16T16:14:45,881     File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle
2022-09-16T16:14:45,881       self.emit(record)
2022-09-16T16:14:45,882     File "/tmp/pip-standalone-pip-180ljc1v/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit
2022-09-16T16:14:45,882       self.handleError(record)
2022-09-16T16:14:45,882   Message: '[present-rich] %s'
2022-09-16T16:14:45,883   Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),)
2022-09-16T16:14:46,312   Installing backend dependencies: finished with status 'done'
2022-09-16T16:14:46,335   Created temporary directory: /tmp/pip-modern-metadata-ahpce64k
2022-09-16T16:14:46,341   Preparing metadata (pyproject.toml): started
2022-09-16T16:14:46,343   Running command Preparing metadata (pyproject.toml)
2022-09-16T16:14:50,565   /usr/local/lib/python3.7/dist-packages/setuptools/config/pyprojecttoml.py:102: _ExperimentalProjectMetadata: Support for project metadata in `pyproject.toml` is still experimental and may be removed (or change) in future releases.
2022-09-16T16:14:50,566     warnings.warn(msg, _ExperimentalProjectMetadata)
2022-09-16T16:14:50,566   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:50,568       ##########################################################################
2022-09-16T16:14:50,568       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:50,568       ##########################################################################

2022-09-16T16:14:50,569       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:50,571       `readme = "# cvi\n\nA Python package implementing both batch and incremental cluster validity indices (CVIs).\n\n| **Stable Docs**  | **Dev Docs** | **Build Status** | **Coverage** |\n|:----------------:|:------------:|:----------------:|:------------:|\n| [![Stable][docs-stable-img]][docs-stable-url] | [![Dev][docs-dev-img]][docs-dev-url]| [![Build Status][ci-img]][ci-url] | [![Codecov][codecov-img]][codecov-url] |\n| **Version** | **Issues** | **Commits** | **Commits Since Release**\n| [![version][version-img]][version-url] | [![issues][issues-img]][issues-url] | [![commits][commits-img]][commits-url] | [![compare][compare-img]][compare-url] |\n\n<!-- | **Zenodo DOI** |\n| :------------: |\n| [![DOI][zenodo-img]][zenodo-url] | -->\n\n[docs-stable-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=latest\n[docs-stable-url]: https://cluster-validity-indices.readthedocs.io/en/latest/?badge=latest\n\n[docs-dev-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=develop\n[docs-dev-url]: https://cluster-validity-indices.readthedocs.io/en/develop/?badge=develop\n\n[ci-img]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml/badge.svg\n[ci-url]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml\n\n[codecov-img]: https://codecov.io/gh/AP6YC/cvi/branch/main/graph/badge.svg\n[codecov-url]: https://codecov.io/gh/AP6YC/cvi\n\n[version-img]: https://img.shields.io/pypi/v/cvi.svg\n[version-url]: https://pypi.org/project/cvi\n\n[issues-img]: https://img.shields.io/github/issues/AP6YC/cvi?style=flat\n[issues-url]: https://github.com/AP6YC/cvi/issues\n\n[commits-img]: https://img.shields.io/github/commit-activity/m/AP6YC/cvi?style=flat\n[commits-url]: https://github.com/AP6YC/cvi/commits/main\n\n[compare-img]: https://img.shields.io/github/commits-since/AP6YC/cvi/latest/develop\n[compare-url]: https://github.com/AP6YC/cvi/compare/v0.1.0-alpha.4...develop\n\n## Table of Contents\n\n- [cvi](#cvi)\n  - [Table of Contents](#table-of-contents)\n  - [Cluster Validity Indices](#cluster-validity-indices)\n  - [Installation](#installation)\n  - [Usage](#usage)\n  - [History](#history)\n  - [Acknowledgements](#acknowledgements)\n  - [Related Projects](#related-projects)\n\n## Cluster Validity Indices\n\nSay you have a clustering algorithm that clusters a set of samples containing features of some kind and some dimensionality.\nGreat!\nThat was a lot of work, and you should feel accomplished.\nBut how do you know that the algorithm performed _well_?\nBy definition, you wouldn't have the _true_ label belonging to each sample (if one could even exist in your context), just the label prescribed by your clustering algorithm.\n\n**Enter Cluster Validity Indices (CVIs)**.\n\nCVIs are metrics of cluster partitioning when true cluster labels are unavailable.\nEach operates on only the information available (i.e., the provided samples of features and the labels prescribed by the clustering algorithm) and produces a _metric_, a number that goes up or down according to how well the CVI believes the clustering algorithm appears to, well, _cluster_.\nClustering well in this context means correctly partitioning (i.e., separating) the data rather than prescribing too many different clusters (over partitioning) or too few (under partitioning)\nEvery CVI itself also behaves differently in terms of the range and scale of their numbers.\n**Furthermore, each CVI has an original batch implementation and incremental implementation that are equivalent**.\n\nThe `cvi` Python package contains a variety of these batch and incremental CVIs.\n\n## Installation\n\nThe `cvi` package is listed on PyPi, so you may install the latest version with\n\n```python\npip install cvi\n```\n\nYou can also specify a version to install in the usual way with\n\n```python\npip install cvi==v0.1.0-alpha.2\n```\n\nAlternatively, you can manually install a release from the [releases page](https://github.com/AP6YC/cvi/releases) on GitHub.\n\n## Usage\n\nTODO\n\n## History\n\n- 8/18/2022: Initialize project.\n- 9/8/2022: First release on PyPi and initiate GitFlow.\n\n## Acknowledgements\n\nThe incremental and batch CVI implementations in this package are largely derived from the following Julia language implementations:\n\n- https://github.com/AP6YC/ClusterValidityIndices.jl\n\nThe principal authors of the `cvi` pacakge are:\n\n- Sasha Petrenko <sap625@mst.edu>\n- Nik Melton <nmmz76@mst.edu>\n\n## Related Projects\n\nIf this package is missing something that you need, feel free to check out some related Python cluster validity packages:\n\n- [validclust](https://github.com/crew102/validclust)\n- [clusterval](https://github.com/Nuno09/clusterval)\n"`

2022-09-16T16:14:50,572       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:50,572       consider this value unless 'readme' is listed as `dynamic`.

2022-09-16T16:14:50,573       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:50,574       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:50,574       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:50,575       follow strictly the standard.

2022-09-16T16:14:50,575       To prevent this warning, you can list 'readme' under `dynamic` or alternatively
2022-09-16T16:14:50,576       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:50,576       configuration.


2022-09-16T16:14:50,577   !!

2022-09-16T16:14:50,578     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:50,578   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:50,580       ##########################################################################
2022-09-16T16:14:50,580       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:50,581       ##########################################################################

2022-09-16T16:14:50,581       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:50,582       `requires-python = <SpecifierSet('>=3.6')>`

2022-09-16T16:14:50,583       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:50,583       consider this value unless 'requires-python' is listed as `dynamic`.

2022-09-16T16:14:50,584       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:50,585       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:50,585       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:50,585       follow strictly the standard.

2022-09-16T16:14:50,586       To prevent this warning, you can list 'requires-python' under `dynamic` or alternatively
2022-09-16T16:14:50,586       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:50,587       configuration.


2022-09-16T16:14:50,588   !!

2022-09-16T16:14:50,589     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:50,589   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:50,590       ##########################################################################
2022-09-16T16:14:50,591       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:50,591       ##########################################################################

2022-09-16T16:14:50,592       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:50,592       `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent']`

2022-09-16T16:14:50,593       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:50,593       consider this value unless 'classifiers' is listed as `dynamic`.

2022-09-16T16:14:50,594       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:50,595       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:50,595       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:50,596       follow strictly the standard.

2022-09-16T16:14:50,597       To prevent this warning, you can list 'classifiers' under `dynamic` or alternatively
2022-09-16T16:14:50,597       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:50,597       configuration.


2022-09-16T16:14:50,598   !!

2022-09-16T16:14:50,599     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:52,232   running dist_info
2022-09-16T16:14:52,870   creating /tmp/pip-modern-metadata-ahpce64k/cvi.egg-info
2022-09-16T16:14:53,503   writing /tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/PKG-INFO
2022-09-16T16:14:54,102   writing dependency_links to /tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/dependency_links.txt
2022-09-16T16:14:57,072   writing requirements to /tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/requires.txt
2022-09-16T16:14:57,667   writing top-level names to /tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/top_level.txt
2022-09-16T16:14:57,671   writing manifest file '/tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/SOURCES.txt'
2022-09-16T16:14:58,385   reading manifest file '/tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/SOURCES.txt'
2022-09-16T16:14:58,388   adding license file 'LICENSE'
2022-09-16T16:14:58,393   writing manifest file '/tmp/pip-modern-metadata-ahpce64k/cvi.egg-info/SOURCES.txt'
2022-09-16T16:14:58,396   creating '/tmp/pip-modern-metadata-ahpce64k/cvi-0.1.0a4.dist-info'
2022-09-16T16:14:58,537   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-09-16T16:14:58,551   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:14:58,552       ##########################################################################
2022-09-16T16:14:58,553       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:14:58,553       ##########################################################################

2022-09-16T16:14:58,555       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:14:58,556       `urls = {'Bug Tracker': 'https://github.com/AP6YC/cvi/issues', 'Documentation': 'https://cluster-validity-indices.readthedocs.io/'}`

2022-09-16T16:14:58,557       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:14:58,557       consider this value unless 'urls' is listed as `dynamic`.

2022-09-16T16:14:58,558       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:14:58,559       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:14:58,559       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:14:58,560       follow strictly the standard.

2022-09-16T16:14:58,561       To prevent this warning, you can list 'urls' under `dynamic` or alternatively
2022-09-16T16:14:58,561       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:14:58,562       configuration.


2022-09-16T16:14:58,563   !!

2022-09-16T16:14:58,564     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:14:58,863   Preparing metadata (pyproject.toml): finished with status 'done'
2022-09-16T16:14:58,879   Source in /tmp/pip-wheel-an9sh8tg/cvi_12f37e37dd14417f84a263ef0b3a0647 has version 0.1.0a4, which satisfies requirement cvi==0.1.0a4 from https://files.pythonhosted.org/packages/91/6f/fa2f196409f1c29910f5e3168d25240004b9277ea75f042c60dcf621c99b/cvi-0.1.0a4.tar.gz#sha256=e5c42aba908237e8c6f7b047b3873012cd6f726943f18913e6caad62e7399b8a
2022-09-16T16:14:58,881   Removed cvi==0.1.0a4 from https://files.pythonhosted.org/packages/91/6f/fa2f196409f1c29910f5e3168d25240004b9277ea75f042c60dcf621c99b/cvi-0.1.0a4.tar.gz#sha256=e5c42aba908237e8c6f7b047b3873012cd6f726943f18913e6caad62e7399b8a from build tracker '/tmp/pip-build-tracker-e07o_usu'
2022-09-16T16:14:58,895 Created temporary directory: /tmp/pip-unpack-npthgzsn
2022-09-16T16:14:58,896 Building wheels for collected packages: cvi
2022-09-16T16:14:58,906   Created temporary directory: /tmp/pip-wheel-r_yzrkur
2022-09-16T16:14:58,907   Destination directory: /tmp/pip-wheel-r_yzrkur
2022-09-16T16:14:58,912   Building wheel for cvi (pyproject.toml): started
2022-09-16T16:14:58,914   Running command Building wheel for cvi (pyproject.toml)
2022-09-16T16:15:03,103   /usr/local/lib/python3.7/dist-packages/setuptools/config/pyprojecttoml.py:102: _ExperimentalProjectMetadata: Support for project metadata in `pyproject.toml` is still experimental and may be removed (or change) in future releases.
2022-09-16T16:15:03,105     warnings.warn(msg, _ExperimentalProjectMetadata)
2022-09-16T16:15:03,105   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:15:03,106       ##########################################################################
2022-09-16T16:15:03,107       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:15:03,107       ##########################################################################

2022-09-16T16:15:03,108       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:15:03,109       `readme = "# cvi\n\nA Python package implementing both batch and incremental cluster validity indices (CVIs).\n\n| **Stable Docs**  | **Dev Docs** | **Build Status** | **Coverage** |\n|:----------------:|:------------:|:----------------:|:------------:|\n| [![Stable][docs-stable-img]][docs-stable-url] | [![Dev][docs-dev-img]][docs-dev-url]| [![Build Status][ci-img]][ci-url] | [![Codecov][codecov-img]][codecov-url] |\n| **Version** | **Issues** | **Commits** | **Commits Since Release**\n| [![version][version-img]][version-url] | [![issues][issues-img]][issues-url] | [![commits][commits-img]][commits-url] | [![compare][compare-img]][compare-url] |\n\n<!-- | **Zenodo DOI** |\n| :------------: |\n| [![DOI][zenodo-img]][zenodo-url] | -->\n\n[docs-stable-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=latest\n[docs-stable-url]: https://cluster-validity-indices.readthedocs.io/en/latest/?badge=latest\n\n[docs-dev-img]: https://readthedocs.org/projects/cluster-validity-indices/badge/?version=develop\n[docs-dev-url]: https://cluster-validity-indices.readthedocs.io/en/develop/?badge=develop\n\n[ci-img]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml/badge.svg\n[ci-url]: https://github.com/AP6YC/cvi/actions/workflows/Test.yml\n\n[codecov-img]: https://codecov.io/gh/AP6YC/cvi/branch/main/graph/badge.svg\n[codecov-url]: https://codecov.io/gh/AP6YC/cvi\n\n[version-img]: https://img.shields.io/pypi/v/cvi.svg\n[version-url]: https://pypi.org/project/cvi\n\n[issues-img]: https://img.shields.io/github/issues/AP6YC/cvi?style=flat\n[issues-url]: https://github.com/AP6YC/cvi/issues\n\n[commits-img]: https://img.shields.io/github/commit-activity/m/AP6YC/cvi?style=flat\n[commits-url]: https://github.com/AP6YC/cvi/commits/main\n\n[compare-img]: https://img.shields.io/github/commits-since/AP6YC/cvi/latest/develop\n[compare-url]: https://github.com/AP6YC/cvi/compare/v0.1.0-alpha.4...develop\n\n## Table of Contents\n\n- [cvi](#cvi)\n  - [Table of Contents](#table-of-contents)\n  - [Cluster Validity Indices](#cluster-validity-indices)\n  - [Installation](#installation)\n  - [Usage](#usage)\n  - [History](#history)\n  - [Acknowledgements](#acknowledgements)\n  - [Related Projects](#related-projects)\n\n## Cluster Validity Indices\n\nSay you have a clustering algorithm that clusters a set of samples containing features of some kind and some dimensionality.\nGreat!\nThat was a lot of work, and you should feel accomplished.\nBut how do you know that the algorithm performed _well_?\nBy definition, you wouldn't have the _true_ label belonging to each sample (if one could even exist in your context), just the label prescribed by your clustering algorithm.\n\n**Enter Cluster Validity Indices (CVIs)**.\n\nCVIs are metrics of cluster partitioning when true cluster labels are unavailable.\nEach operates on only the information available (i.e., the provided samples of features and the labels prescribed by the clustering algorithm) and produces a _metric_, a number that goes up or down according to how well the CVI believes the clustering algorithm appears to, well, _cluster_.\nClustering well in this context means correctly partitioning (i.e., separating) the data rather than prescribing too many different clusters (over partitioning) or too few (under partitioning)\nEvery CVI itself also behaves differently in terms of the range and scale of their numbers.\n**Furthermore, each CVI has an original batch implementation and incremental implementation that are equivalent**.\n\nThe `cvi` Python package contains a variety of these batch and incremental CVIs.\n\n## Installation\n\nThe `cvi` package is listed on PyPi, so you may install the latest version with\n\n```python\npip install cvi\n```\n\nYou can also specify a version to install in the usual way with\n\n```python\npip install cvi==v0.1.0-alpha.2\n```\n\nAlternatively, you can manually install a release from the [releases page](https://github.com/AP6YC/cvi/releases) on GitHub.\n\n## Usage\n\nTODO\n\n## History\n\n- 8/18/2022: Initialize project.\n- 9/8/2022: First release on PyPi and initiate GitFlow.\n\n## Acknowledgements\n\nThe incremental and batch CVI implementations in this package are largely derived from the following Julia language implementations:\n\n- https://github.com/AP6YC/ClusterValidityIndices.jl\n\nThe principal authors of the `cvi` pacakge are:\n\n- Sasha Petrenko <sap625@mst.edu>\n- Nik Melton <nmmz76@mst.edu>\n\n## Related Projects\n\nIf this package is missing something that you need, feel free to check out some related Python cluster validity packages:\n\n- [validclust](https://github.com/crew102/validclust)\n- [clusterval](https://github.com/Nuno09/clusterval)\n"`

2022-09-16T16:15:03,111       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:15:03,111       consider this value unless 'readme' is listed as `dynamic`.

2022-09-16T16:15:03,112       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:15:03,113       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:15:03,113       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:15:03,114       follow strictly the standard.

2022-09-16T16:15:03,114       To prevent this warning, you can list 'readme' under `dynamic` or alternatively
2022-09-16T16:15:03,115       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:15:03,115       configuration.


2022-09-16T16:15:03,116   !!

2022-09-16T16:15:03,117     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:15:03,117   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:15:03,119       ##########################################################################
2022-09-16T16:15:03,119       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:15:03,120       ##########################################################################

2022-09-16T16:15:03,120       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:15:03,121       `requires-python = <SpecifierSet('>=3.6')>`

2022-09-16T16:15:03,122       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:15:03,122       consider this value unless 'requires-python' is listed as `dynamic`.

2022-09-16T16:15:03,123       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:15:03,124       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:15:03,124       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:15:03,124       follow strictly the standard.

2022-09-16T16:15:03,125       To prevent this warning, you can list 'requires-python' under `dynamic` or alternatively
2022-09-16T16:15:03,125       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:15:03,126       configuration.


2022-09-16T16:15:03,127   !!

2022-09-16T16:15:03,128     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:15:03,128   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:15:03,129       ##########################################################################
2022-09-16T16:15:03,130       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:15:03,130       ##########################################################################

2022-09-16T16:15:03,131       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:15:03,131       `classifiers = ['Programming Language :: Python :: 3', 'License :: OSI Approved :: MIT License', 'Operating System :: OS Independent']`

2022-09-16T16:15:03,132       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:15:03,132       consider this value unless 'classifiers' is listed as `dynamic`.

2022-09-16T16:15:03,133       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:15:03,134       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:15:03,134       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:15:03,135       follow strictly the standard.

2022-09-16T16:15:03,136       To prevent this warning, you can list 'classifiers' under `dynamic` or alternatively
2022-09-16T16:15:03,136       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:15:03,136       configuration.


2022-09-16T16:15:03,137   !!

2022-09-16T16:15:03,138     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:15:04,134   running bdist_wheel
2022-09-16T16:15:04,931   running build
2022-09-16T16:15:04,931   running build_py
2022-09-16T16:15:05,567   creating build
2022-09-16T16:15:05,568   creating build/lib
2022-09-16T16:15:05,569   creating build/lib/cvi
2022-09-16T16:15:05,571   copying src/cvi/__init__.py -> build/lib/cvi
2022-09-16T16:15:05,575   copying src/cvi/icvi.py -> build/lib/cvi
2022-09-16T16:15:05,582   creating build/lib/cvi/modules
2022-09-16T16:15:05,584   copying src/cvi/modules/_base.py -> build/lib/cvi/modules
2022-09-16T16:15:05,589   copying src/cvi/modules/__init__.py -> build/lib/cvi/modules
2022-09-16T16:15:05,594   copying src/cvi/modules/CH.py -> build/lib/cvi/modules
2022-09-16T16:15:05,598   copying src/cvi/modules/DB.py -> build/lib/cvi/modules
2022-09-16T16:15:05,604   copying src/cvi/modules/cSIL.py -> build/lib/cvi/modules
2022-09-16T16:15:05,608   running egg_info
2022-09-16T16:15:06,882   writing src/cvi.egg-info/PKG-INFO
2022-09-16T16:15:07,485   writing dependency_links to src/cvi.egg-info/dependency_links.txt
2022-09-16T16:15:10,470   writing requirements to src/cvi.egg-info/requires.txt
2022-09-16T16:15:11,069   writing top-level names to src/cvi.egg-info/top_level.txt
2022-09-16T16:15:11,115   reading manifest file 'src/cvi.egg-info/SOURCES.txt'
2022-09-16T16:15:11,120   adding license file 'LICENSE'
2022-09-16T16:15:11,125   writing manifest file 'src/cvi.egg-info/SOURCES.txt'
2022-09-16T16:15:12,396   installing to build/bdist.linux-armv7l/wheel
2022-09-16T16:15:12,396   running install
2022-09-16T16:15:12,459   running install_lib
2022-09-16T16:15:13,098   creating build/bdist.linux-armv7l
2022-09-16T16:15:13,100   creating build/bdist.linux-armv7l/wheel
2022-09-16T16:15:13,104   creating build/bdist.linux-armv7l/wheel/cvi
2022-09-16T16:15:13,106   copying build/lib/cvi/__init__.py -> build/bdist.linux-armv7l/wheel/cvi
2022-09-16T16:15:13,111   copying build/lib/cvi/icvi.py -> build/bdist.linux-armv7l/wheel/cvi
2022-09-16T16:15:13,117   creating build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,120   copying build/lib/cvi/modules/_base.py -> build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,125   copying build/lib/cvi/modules/__init__.py -> build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,129   copying build/lib/cvi/modules/CH.py -> build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,134   copying build/lib/cvi/modules/DB.py -> build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,139   copying build/lib/cvi/modules/cSIL.py -> build/bdist.linux-armv7l/wheel/cvi/modules
2022-09-16T16:15:13,144   running install_egg_info
2022-09-16T16:15:13,776   Copying src/cvi.egg-info to build/bdist.linux-armv7l/wheel/cvi-0.1.0a4-py3.7.egg-info
2022-09-16T16:15:13,800   running install_scripts
2022-09-16T16:15:13,836   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-09-16T16:15:13,847   creating build/bdist.linux-armv7l/wheel/cvi-0.1.0a4.dist-info/WHEEL
2022-09-16T16:15:13,853   creating '/tmp/pip-wheel-r_yzrkur/tmpo1pfbuif/cvi-0.1.0a4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-09-16T16:15:13,859   adding 'cvi/__init__.py'
2022-09-16T16:15:13,864   adding 'cvi/icvi.py'
2022-09-16T16:15:13,870   adding 'cvi/modules/CH.py'
2022-09-16T16:15:13,874   adding 'cvi/modules/DB.py'
2022-09-16T16:15:13,877   adding 'cvi/modules/__init__.py'
2022-09-16T16:15:13,881   adding 'cvi/modules/_base.py'
2022-09-16T16:15:13,885   adding 'cvi/modules/cSIL.py'
2022-09-16T16:15:13,890   adding 'cvi-0.1.0a4.dist-info/LICENSE'
2022-09-16T16:15:13,894   adding 'cvi-0.1.0a4.dist-info/METADATA'
2022-09-16T16:15:13,896   adding 'cvi-0.1.0a4.dist-info/WHEEL'
2022-09-16T16:15:13,898   adding 'cvi-0.1.0a4.dist-info/top_level.txt'
2022-09-16T16:15:13,901   adding 'cvi-0.1.0a4.dist-info/RECORD'
2022-09-16T16:15:13,904   removing build/bdist.linux-armv7l/wheel
2022-09-16T16:15:13,919   /usr/local/lib/python3.7/dist-packages/setuptools/config/_apply_pyprojecttoml.py:101: _WouldIgnoreField: !!


2022-09-16T16:15:13,920       ##########################################################################
2022-09-16T16:15:13,921       # configuration would be ignored/result in error due to `pyproject.toml` #
2022-09-16T16:15:13,921       ##########################################################################

2022-09-16T16:15:13,922       The following seems to be defined outside of `pyproject.toml`:

2022-09-16T16:15:13,922       `urls = {'Bug Tracker': 'https://github.com/AP6YC/cvi/issues', 'Documentation': 'https://cluster-validity-indices.readthedocs.io/'}`

2022-09-16T16:15:13,923       According to the spec (see the link bellow), however, setuptools CANNOT
2022-09-16T16:15:13,923       consider this value unless 'urls' is listed as `dynamic`.

2022-09-16T16:15:13,924       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2022-09-16T16:15:13,924       For the time being, `setuptools` will still consider the given value (as a
2022-09-16T16:15:13,925       **transitional** measure), but please note that future releases of setuptools will
2022-09-16T16:15:13,925       follow strictly the standard.

2022-09-16T16:15:13,926       To prevent this warning, you can list 'urls' under `dynamic` or alternatively
2022-09-16T16:15:13,926       remove the `[project]` table from your file and rely entirely on other means of
2022-09-16T16:15:13,926       configuration.


2022-09-16T16:15:13,927   !!

2022-09-16T16:15:13,928     warnings.warn(msg, _WouldIgnoreField)
2022-09-16T16:15:14,243   Building wheel for cvi (pyproject.toml): finished with status 'done'
2022-09-16T16:15:14,255   Created wheel for cvi: filename=cvi-0.1.0a4-py3-none-any.whl size=15058 sha256=ef3ec965a1fc2d155cca6d3fda93d1fe7a2d9e3b78211ab5351752a6c3e3f8dc
2022-09-16T16:15:14,258   Stored in directory: /tmp/pip-ephem-wheel-cache-8lsx4iac/wheels/24/f8/16/9afb4abf01118331efce9320ec75626e20aff9f147ef873180
2022-09-16T16:15:14,281 Successfully built cvi
2022-09-16T16:15:14,288 Removed build tracker: '/tmp/pip-build-tracker-e07o_usu'