2022-09-23T11:46:00,831 Created temporary directory: /tmp/pip-ephem-wheel-cache-015m4744 2022-09-23T11:46:00,836 Created temporary directory: /tmp/pip-build-tracker-v55kja1l 2022-09-23T11:46:00,837 Initialized build tracking at /tmp/pip-build-tracker-v55kja1l 2022-09-23T11:46:00,837 Created build tracker: /tmp/pip-build-tracker-v55kja1l 2022-09-23T11:46:00,838 Entered build tracker: /tmp/pip-build-tracker-v55kja1l 2022-09-23T11:46:00,839 Created temporary directory: /tmp/pip-wheel-b57qcqic 2022-09-23T11:46:00,906 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-23T11:46:00,914 2 location(s) to search for versions of capice: 2022-09-23T11:46:00,914 * https://pypi.org/simple/capice/ 2022-09-23T11:46:00,914 * https://www.piwheels.org/simple/capice/ 2022-09-23T11:46:00,915 Fetching project page and analyzing links: https://pypi.org/simple/capice/ 2022-09-23T11:46:00,916 Getting page https://pypi.org/simple/capice/ 2022-09-23T11:46:00,920 Found index url https://pypi.org/simple 2022-09-23T11:46:01,133 Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0 2022-09-23T11:46:01,135 Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz#sha256=b5eb8501028078b58b078728cb5927d30f736dec35d8d17784807fb18bece558 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1 2022-09-23T11:46:01,137 Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz#sha256=fd1c7a04ef0b10576b9843cecc7a188c20ae39edb4ed4a8fec27c8abc13d23f4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2 2022-09-23T11:46:01,138 Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz#sha256=331d26cc87603dd46c81b0d670c6c27566c204ef5f68a150de9dced4d4d46018 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3 2022-09-23T11:46:01,139 Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz#sha256=367c328ad9259ebe6610ea4e335d073cad41187bef8d7461ee2c936f9f66de26 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4 2022-09-23T11:46:01,141 Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz#sha256=a50e36cca3b5152d62d295cd04dc7d30cd4f1ef9d8fa57e22e248fc525b1c3eb (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0 2022-09-23T11:46:01,142 Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz#sha256=dea305de80545a7a0dbf2beac54412500af956d0d02d214fc50dd31dd4af8e95 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0 2022-09-23T11:46:01,144 Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz#sha256=0790bb06d06ebfd6b8314ed31fbb06c31caac1a85a51d4c837efdc060886df4f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1 2022-09-23T11:46:01,145 Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz#sha256=244c612dd6058df96b21011a5460e69ef9b887dedf64fa7526cd65538c3c39a9 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2 2022-09-23T11:46:01,146 Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz#sha256=23bafed2b9bf8b449d4cc33c058b06d50665be06bfeb856f5c59713e20a515b4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0 2022-09-23T11:46:01,148 Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1 2022-09-23T11:46:01,149 Found link https://files.pythonhosted.org/packages/8e/ec/a0d20fce261cadb53b7674ce6d83f21587812c3d7ed4552c2876e32401b2/capice-3.3.0.tar.gz#sha256=8f4987e84311eafa4e58e7e529bb11fa2b4f0b323b2688642c755d41e87254a4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.3.0 2022-09-23T11:46:01,151 Found link https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc1 2022-09-23T11:46:01,152 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/ 2022-09-23T11:46:01,152 Getting page https://www.piwheels.org/simple/capice/ 2022-09-23T11:46:01,154 Found index url https://www.piwheels.org/simple 2022-09-23T11:46:01,382 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.3.0-py3-none-any.whl#sha256=b9a9a3cdfdb1ab474a6183c643babd3470fa84e8c5e3b2c8099a9ffee1c41956 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,383 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.1-py3-none-any.whl#sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,384 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,384 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,385 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,385 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,386 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,386 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,387 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,387 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-09-23T11:46:01,388 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7) 2022-09-23T11:46:01,388 Skipping link: not a file: https://www.piwheels.org/simple/capice/ 2022-09-23T11:46:01,389 Skipping link: not a file: https://pypi.org/simple/capice/ 2022-09-23T11:46:01,438 Given no hashes to check 1 links for project 'capice': discarding no candidates 2022-09-23T11:46:01,480 Collecting capice==4.0.0rc1 2022-09-23T11:46:01,484 Created temporary directory: /tmp/pip-unpack-54am_urz 2022-09-23T11:46:01,739 Downloading capice-4.0.0rc1.tar.gz (35 kB) 2022-09-23T11:46:02,002 Added capice==4.0.0rc1 from https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 to build tracker '/tmp/pip-build-tracker-v55kja1l' 2022-09-23T11:46:02,005 Running setup.py (path:/tmp/pip-wheel-b57qcqic/capice_8cf8a7bb246d41878cf272cc5062f376/setup.py) egg_info for package capice 2022-09-23T11:46:02,007 Created temporary directory: /tmp/pip-pip-egg-info-30gxgx5o 2022-09-23T11:46:02,007 Preparing metadata (setup.py): started 2022-09-23T11:46:02,009 Running command python setup.py egg_info 2022-09-23T11:46:09,183 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing '4.0.0-rc1' to '4.0.0rc1' 2022-09-23T11:46:09,185 warnings.warn(tmpl.format(**locals())) 2022-09-23T11:46:09,911 running egg_info 2022-09-23T11:46:09,916 creating /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info 2022-09-23T11:46:10,561 writing /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/PKG-INFO 2022-09-23T11:46:11,128 writing dependency_links to /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/dependency_links.txt 2022-09-23T11:46:12,817 writing entry points to /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/entry_points.txt 2022-09-23T11:46:13,941 writing requirements to /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/requires.txt 2022-09-23T11:46:14,505 writing top-level names to /tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/top_level.txt 2022-09-23T11:46:14,508 writing manifest file '/tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/SOURCES.txt' 2022-09-23T11:46:15,248 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-09-23T11:46:15,362 reading manifest file '/tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/SOURCES.txt' 2022-09-23T11:46:15,365 adding license file 'LICENSE' 2022-09-23T11:46:15,374 writing manifest file '/tmp/pip-pip-egg-info-30gxgx5o/capice.egg-info/SOURCES.txt' 2022-09-23T11:46:15,583 Preparing metadata (setup.py): finished with status 'done' 2022-09-23T11:46:15,597 Source in /tmp/pip-wheel-b57qcqic/capice_8cf8a7bb246d41878cf272cc5062f376 has version 4.0.0rc1, which satisfies requirement capice==4.0.0rc1 from https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 2022-09-23T11:46:15,599 Removed capice==4.0.0rc1 from https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 from build tracker '/tmp/pip-build-tracker-v55kja1l' 2022-09-23T11:46:15,614 Created temporary directory: /tmp/pip-unpack-yng__4cu 2022-09-23T11:46:15,615 Building wheels for collected packages: capice 2022-09-23T11:46:15,625 Created temporary directory: /tmp/pip-wheel-erfbjv4j 2022-09-23T11:46:15,626 Building wheel for capice (setup.py): started 2022-09-23T11:46:15,628 Destination directory: /tmp/pip-wheel-erfbjv4j 2022-09-23T11:46:15,628 Running command python setup.py bdist_wheel 2022-09-23T11:46:22,706 /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing '4.0.0-rc1' to '4.0.0rc1' 2022-09-23T11:46:22,707 warnings.warn(tmpl.format(**locals())) 2022-09-23T11:46:22,966 running bdist_wheel 2022-09-23T11:46:24,323 running build 2022-09-23T11:46:24,324 running build_py 2022-09-23T11:46:24,965 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-09-23T11:46:24,969 creating build 2022-09-23T11:46:24,970 creating build/lib 2022-09-23T11:46:24,971 creating build/lib/molgenis 2022-09-23T11:46:24,972 creating build/lib/molgenis/capice 2022-09-23T11:46:24,975 copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice 2022-09-23T11:46:24,979 copying src/molgenis/capice/main_explain.py -> build/lib/molgenis/capice 2022-09-23T11:46:24,983 copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice 2022-09-23T11:46:24,987 copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice 2022-09-23T11:46:24,991 copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice 2022-09-23T11:46:24,995 copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice 2022-09-23T11:46:25,000 creating build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,003 copying src/molgenis/capice/utilities/preprocessor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,008 copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,013 copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,017 copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,021 copying src/molgenis/capice/utilities/column_utils.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,026 copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,030 copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,034 copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,039 copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,043 copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,048 copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,052 copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities 2022-09-23T11:46:25,058 creating build/lib/molgenis/capice/core 2022-09-23T11:46:25,060 copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core 2022-09-23T11:46:25,065 copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core 2022-09-23T11:46:25,070 copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core 2022-09-23T11:46:25,075 copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core 2022-09-23T11:46:25,078 copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core 2022-09-23T11:46:25,084 creating build/lib/molgenis/capice/cli 2022-09-23T11:46:25,086 copying src/molgenis/capice/cli/args_handler_explain.py -> build/lib/molgenis/capice/cli 2022-09-23T11:46:25,091 copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli 2022-09-23T11:46:25,096 copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli 2022-09-23T11:46:25,101 copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli 2022-09-23T11:46:25,105 copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli 2022-09-23T11:46:25,110 creating build/lib/molgenis/capice/vep 2022-09-23T11:46:25,112 copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,116 copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,120 copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,124 copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,127 copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,131 copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,134 copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,138 copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,141 copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,144 copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,147 copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,151 copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,154 copying src/molgenis/capice/vep/seq.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,158 copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep 2022-09-23T11:46:25,163 creating build/lib/molgenis/capice/validators 2022-09-23T11:46:25,165 copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,169 copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,172 copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,176 copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,179 copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,183 copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,185 copying src/molgenis/capice/validators/model_validator.py -> build/lib/molgenis/capice/validators 2022-09-23T11:46:25,849 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-09-23T11:46:25,850 warnings.warn( 2022-09-23T11:46:26,499 installing to build/bdist.linux-armv7l/wheel 2022-09-23T11:46:26,499 running install 2022-09-23T11:46:26,560 running install_lib 2022-09-23T11:46:27,255 creating build/bdist.linux-armv7l 2022-09-23T11:46:27,255 creating build/bdist.linux-armv7l/wheel 2022-09-23T11:46:27,258 creating build/bdist.linux-armv7l/wheel/molgenis 2022-09-23T11:46:27,261 creating build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,263 copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,267 copying build/lib/molgenis/capice/main_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,272 copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,277 creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,279 copying build/lib/molgenis/capice/utilities/preprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,284 copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,288 copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,292 copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,296 copying build/lib/molgenis/capice/utilities/column_utils.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,299 copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,303 copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,307 copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,312 copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,316 copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,320 copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,324 copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-09-23T11:46:27,329 creating build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,331 copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,336 copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,340 copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,344 copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,348 copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-09-23T11:46:27,353 creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,355 copying build/lib/molgenis/capice/cli/args_handler_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,360 copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,364 copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,369 copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,373 copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-09-23T11:46:27,377 copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,381 copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,386 creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,388 copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,393 copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,397 copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,401 copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,405 copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,409 copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,413 copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,417 copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,421 copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,425 copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,427 copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,431 copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,434 copying build/lib/molgenis/capice/vep/seq.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,438 copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-09-23T11:46:27,441 copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-09-23T11:46:27,445 creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,447 copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,451 copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,454 copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,457 copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,460 copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,464 copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,466 copying build/lib/molgenis/capice/validators/model_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-09-23T11:46:27,469 running install_egg_info 2022-09-23T11:46:28,793 running egg_info 2022-09-23T11:46:29,437 writing src/capice.egg-info/PKG-INFO 2022-09-23T11:46:30,007 writing dependency_links to src/capice.egg-info/dependency_links.txt 2022-09-23T11:46:31,699 writing entry points to src/capice.egg-info/entry_points.txt 2022-09-23T11:46:32,827 writing requirements to src/capice.egg-info/requires.txt 2022-09-23T11:46:33,393 writing top-level names to src/capice.egg-info/top_level.txt 2022-09-23T11:46:33,490 reading manifest file 'src/capice.egg-info/SOURCES.txt' 2022-09-23T11:46:33,496 adding license file 'LICENSE' 2022-09-23T11:46:33,506 writing manifest file 'src/capice.egg-info/SOURCES.txt' 2022-09-23T11:46:33,509 Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-4.0.0rc1-py3.9.egg-info 2022-09-23T11:46:33,534 running install_scripts 2022-09-23T11:46:33,716 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-09-23T11:46:33,725 creating build/bdist.linux-armv7l/wheel/capice-4.0.0rc1.dist-info/WHEEL 2022-09-23T11:46:33,729 creating '/tmp/pip-wheel-erfbjv4j/capice-4.0.0rc1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-23T11:46:33,737 adding 'molgenis/capice/__init__.py' 2022-09-23T11:46:33,740 adding 'molgenis/capice/capice.py' 2022-09-23T11:46:33,742 adding 'molgenis/capice/main_capice.py' 2022-09-23T11:46:33,745 adding 'molgenis/capice/main_explain.py' 2022-09-23T11:46:33,748 adding 'molgenis/capice/main_predict.py' 2022-09-23T11:46:33,751 adding 'molgenis/capice/main_train.py' 2022-09-23T11:46:33,755 adding 'molgenis/capice/cli/__init__.py' 2022-09-23T11:46:33,758 adding 'molgenis/capice/cli/args_handler_explain.py' 2022-09-23T11:46:33,761 adding 'molgenis/capice/cli/args_handler_parent.py' 2022-09-23T11:46:33,763 adding 'molgenis/capice/cli/args_handler_predict.py' 2022-09-23T11:46:33,766 adding 'molgenis/capice/cli/args_handler_train.py' 2022-09-23T11:46:33,769 adding 'molgenis/capice/core/__init__.py' 2022-09-23T11:46:33,772 adding 'molgenis/capice/core/args_handler.py' 2022-09-23T11:46:33,774 adding 'molgenis/capice/core/capice_exporter.py' 2022-09-23T11:46:33,777 adding 'molgenis/capice/core/capice_manager.py' 2022-09-23T11:46:33,780 adding 'molgenis/capice/core/logger.py' 2022-09-23T11:46:33,784 adding 'molgenis/capice/utilities/__init__.py' 2022-09-23T11:46:33,786 adding 'molgenis/capice/utilities/class_suggestor.py' 2022-09-23T11:46:33,788 adding 'molgenis/capice/utilities/column_utils.py' 2022-09-23T11:46:33,791 adding 'molgenis/capice/utilities/custom_logging_filter.py' 2022-09-23T11:46:33,793 adding 'molgenis/capice/utilities/dynamic_loader.py' 2022-09-23T11:46:33,796 adding 'molgenis/capice/utilities/enums.py' 2022-09-23T11:46:33,798 adding 'molgenis/capice/utilities/input_parser.py' 2022-09-23T11:46:33,801 adding 'molgenis/capice/utilities/input_processor.py' 2022-09-23T11:46:33,803 adding 'molgenis/capice/utilities/load_file_postprocessor.py' 2022-09-23T11:46:33,806 adding 'molgenis/capice/utilities/manual_vep_processor.py' 2022-09-23T11:46:33,808 adding 'molgenis/capice/utilities/predictor.py' 2022-09-23T11:46:33,811 adding 'molgenis/capice/utilities/preprocessor.py' 2022-09-23T11:46:33,815 adding 'molgenis/capice/validators/__init__.py' 2022-09-23T11:46:33,817 adding 'molgenis/capice/validators/input_validator.py' 2022-09-23T11:46:33,819 adding 'molgenis/capice/validators/model_validator.py' 2022-09-23T11:46:33,822 adding 'molgenis/capice/validators/post_file_parse_validator.py' 2022-09-23T11:46:33,824 adding 'molgenis/capice/validators/post_vep_processing_validator.py' 2022-09-23T11:46:33,826 adding 'molgenis/capice/validators/property_type_validator.py' 2022-09-23T11:46:33,829 adding 'molgenis/capice/validators/version_validator.py' 2022-09-23T11:46:33,832 adding 'molgenis/capice/vep/__init__.py' 2022-09-23T11:46:33,834 adding 'molgenis/capice/vep/amino_acids.py' 2022-09-23T11:46:33,836 adding 'molgenis/capice/vep/cdna_position.py' 2022-09-23T11:46:33,838 adding 'molgenis/capice/vep/cds_position.py' 2022-09-23T11:46:33,841 adding 'molgenis/capice/vep/consequence.py' 2022-09-23T11:46:33,843 adding 'molgenis/capice/vep/length.py' 2022-09-23T11:46:33,845 adding 'molgenis/capice/vep/poly_phen.py' 2022-09-23T11:46:33,847 adding 'molgenis/capice/vep/protein_position.py' 2022-09-23T11:46:33,849 adding 'molgenis/capice/vep/seq.py' 2022-09-23T11:46:33,852 adding 'molgenis/capice/vep/sift.py' 2022-09-23T11:46:33,854 adding 'molgenis/capice/vep/template.py' 2022-09-23T11:46:33,856 adding 'molgenis/capice/vep/template_position.py' 2022-09-23T11:46:33,858 adding 'molgenis/capice/vep/template_sift_polyphen.py' 2022-09-23T11:46:33,861 adding 'molgenis/capice/vep/type.py' 2022-09-23T11:46:33,864 adding 'capice-4.0.0rc1.dist-info/LICENSE' 2022-09-23T11:46:33,869 adding 'capice-4.0.0rc1.dist-info/METADATA' 2022-09-23T11:46:33,871 adding 'capice-4.0.0rc1.dist-info/WHEEL' 2022-09-23T11:46:33,873 adding 'capice-4.0.0rc1.dist-info/entry_points.txt' 2022-09-23T11:46:33,874 adding 'capice-4.0.0rc1.dist-info/top_level.txt' 2022-09-23T11:46:33,878 adding 'capice-4.0.0rc1.dist-info/RECORD' 2022-09-23T11:46:33,883 removing build/bdist.linux-armv7l/wheel 2022-09-23T11:46:34,162 Building wheel for capice (setup.py): finished with status 'done' 2022-09-23T11:46:34,170 Created wheel for capice: filename=capice-4.0.0rc1-py3-none-any.whl size=51957 sha256=2ffdc4d32ff14ea03e7417e65ac6f49c3fb84ebc8a2b0e904801a4762469b21c 2022-09-23T11:46:34,172 Stored in directory: /tmp/pip-ephem-wheel-cache-015m4744/wheels/09/6e/4c/c91286e8f9e078b9d37e8dfbc2fcab05cf202b12aa04cd621b 2022-09-23T11:46:34,203 Successfully built capice 2022-09-23T11:46:34,214 Removed build tracker: '/tmp/pip-build-tracker-v55kja1l'