2022-09-25T15:05:13,277 Created temporary directory: /tmp/pip-ephem-wheel-cache-2f614z79 2022-09-25T15:05:13,283 Created temporary directory: /tmp/pip-build-tracker-p4d2xmrf 2022-09-25T15:05:13,284 Initialized build tracking at /tmp/pip-build-tracker-p4d2xmrf 2022-09-25T15:05:13,284 Created build tracker: /tmp/pip-build-tracker-p4d2xmrf 2022-09-25T15:05:13,285 Entered build tracker: /tmp/pip-build-tracker-p4d2xmrf 2022-09-25T15:05:13,286 Created temporary directory: /tmp/pip-wheel-_ajxs0bp 2022-09-25T15:05:13,350 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-25T15:05:13,358 2 location(s) to search for versions of pyspk: 2022-09-25T15:05:13,358 * https://pypi.org/simple/pyspk/ 2022-09-25T15:05:13,358 * https://www.piwheels.org/simple/pyspk/ 2022-09-25T15:05:13,359 Fetching project page and analyzing links: https://pypi.org/simple/pyspk/ 2022-09-25T15:05:13,360 Getting page https://pypi.org/simple/pyspk/ 2022-09-25T15:05:13,364 Found index url https://pypi.org/simple 2022-09-25T15:05:13,555 Skipping link: No binaries permitted for pyspk: https://files.pythonhosted.org/packages/5e/28/45cc983684e34adf374c2d114a24861d4d9e1c2250a56078fa251ecde3fa/pyspk-1.0-py3-none-any.whl#sha256=4273a31f26cb4abe06b07dd7ef3f1af3e451efbb3388c9cd8ff86434dfd45d49 (from https://pypi.org/simple/pyspk/) 2022-09-25T15:05:13,556 Found link https://files.pythonhosted.org/packages/a8/d2/0734e1e3790826d866e4d99bdc646fba69430f90883d2ba783b2ec83ec06/pyspk-1.0.tar.gz#sha256=9e198d00cee5101d60da4b5a5f75b36df3d4862b9766d3afc813b845fd03e901 (from https://pypi.org/simple/pyspk/), version: 1.0 2022-09-25T15:05:13,557 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyspk/ 2022-09-25T15:05:13,558 Getting page https://www.piwheels.org/simple/pyspk/ 2022-09-25T15:05:13,560 Found index url https://www.piwheels.org/simple 2022-09-25T15:05:13,889 Skipping link: not a file: https://www.piwheels.org/simple/pyspk/ 2022-09-25T15:05:13,889 Skipping link: not a file: https://pypi.org/simple/pyspk/ 2022-09-25T15:05:13,923 Given no hashes to check 1 links for project 'pyspk': discarding no candidates 2022-09-25T15:05:13,954 Collecting pyspk==1.0 2022-09-25T15:05:13,958 Created temporary directory: /tmp/pip-unpack-cokiyjab 2022-09-25T15:05:14,200 Downloading pyspk-1.0.tar.gz (148 kB) 2022-09-25T15:05:14,403 Added pyspk==1.0 from https://files.pythonhosted.org/packages/a8/d2/0734e1e3790826d866e4d99bdc646fba69430f90883d2ba783b2ec83ec06/pyspk-1.0.tar.gz#sha256=9e198d00cee5101d60da4b5a5f75b36df3d4862b9766d3afc813b845fd03e901 to build tracker '/tmp/pip-build-tracker-p4d2xmrf' 2022-09-25T15:05:14,406 Running setup.py (path:/tmp/pip-wheel-_ajxs0bp/pyspk_422207f66a754e41b6972945f2ba11ae/setup.py) egg_info for package pyspk 2022-09-25T15:05:14,407 Created temporary directory: /tmp/pip-pip-egg-info-d6_e0mi9 2022-09-25T15:05:14,408 Preparing metadata (setup.py): started 2022-09-25T15:05:14,410 Running command python setup.py egg_info 2022-09-25T15:05:22,007 # py-SP(k) - A hydrodynamical simulation-based model for the impact of baryon physics on the non-linear matter power spectrum 2022-09-25T15:05:22,009 _____ ____ ____ _ 2022-09-25T15:05:22,009 ____ __ __ / ___// __ \_/_/ /__| | 2022-09-25T15:05:22,010 / __ \/ / / /_____\__ \/ /_/ / // //_// / 2022-09-25T15:05:22,010 / /_/ / /_/ /_____/__/ / ____/ // ,< / / 2022-09-25T15:05:22,010 / .___/\__, / /____/_/ / //_/|_|/_/ 2022-09-25T15:05:22,011 /_/ /____/ |_| /_/ 2022-09-25T15:05:22,011 py-SP(k) is a python package aimed at predicting the suppression of the total matter power spectrum due to baryonic physics as a function of the baryon fraction of haloes and redshift. 2022-09-25T15:05:22,012 ### Requirements 2022-09-25T15:05:22,013 The module requires the following: 2022-09-25T15:05:22,013 - numpy 2022-09-25T15:05:22,014 - scipy 2022-09-25T15:05:22,014 ### Installation 2022-09-25T15:05:22,015 The easiest way to install py-SP(k) is using pip: 2022-09-25T15:05:22,016 ``` 2022-09-25T15:05:22,016 pip install pyspk [--user] 2022-09-25T15:05:22,016 ``` 2022-09-25T15:05:22,017 The --user flag may be required if you do not have root privileges. 2022-09-25T15:05:22,018 ### Usage 2022-09-25T15:05:22,018 A simple example: 2022-09-25T15:05:22,019 ``` 2022-09-25T15:05:22,019 import pyspk as spk 2022-09-25T15:05:22,020 z = 0.125 2022-09-25T15:05:22,020 fb_a = 8.44e-05 2022-09-25T15:05:22,021 fb_pow = 0.275 2022-09-25T15:05:22,021 k, sup = spk.sup_model(SO=200, z=z, fb_a=fb_a, fb_pow=fb_pow, k_max=10) 2022-09-25T15:05:22,022 ``` 2022-09-25T15:05:22,022 A jupyter notebook with more examples can be found within this [repository](https://github.com/jemme07/pyspk/blob/main/examples/pySPk_Examples.ipynb). 2022-09-25T15:05:22,023 ### Acknowledging the code 2022-09-25T15:05:22,024 Please cite spk using: 2022-09-25T15:05:22,025 ``` 2022-09-25T15:05:22,025 @ARTICLE{spk, 2022-09-25T15:05:22,025 author = {}, 2022-09-25T15:05:22,026 title = "{}", 2022-09-25T15:05:22,026 journal = {\mnras}, 2022-09-25T15:05:22,026 keywords = {}, 2022-09-25T15:05:22,027 year = , 2022-09-25T15:05:22,027 month = , 2022-09-25T15:05:22,027 volume = {}, 2022-09-25T15:05:22,028 number = {}, 2022-09-25T15:05:22,028 pages = {}, 2022-09-25T15:05:22,029 doi = {}, 2022-09-25T15:05:22,029 archivePrefix = {arXiv}, 2022-09-25T15:05:22,029 eprint = {}, 2022-09-25T15:05:22,030 primaryClass = {astro-ph.CO}, 2022-09-25T15:05:22,030 adsurl = {}, 2022-09-25T15:05:22,030 adsnote = {} 2022-09-25T15:05:22,030 } 2022-09-25T15:05:22,031 ``` 2022-09-25T15:05:22,031 For any questions and enquires please contact me via email at *j.salcidonegrete@ljmu.ac.uk* 2022-09-25T15:05:22,032 running egg_info 2022-09-25T15:05:22,033 creating /tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info 2022-09-25T15:05:22,736 writing /tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/PKG-INFO 2022-09-25T15:05:23,331 writing dependency_links to /tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/dependency_links.txt 2022-09-25T15:05:26,294 writing requirements to /tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/requires.txt 2022-09-25T15:05:26,890 writing top-level names to /tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/top_level.txt 2022-09-25T15:05:26,892 writing manifest file '/tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/SOURCES.txt' 2022-09-25T15:05:27,890 reading manifest file '/tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/SOURCES.txt' 2022-09-25T15:05:27,894 reading manifest template 'MANIFEST.in' 2022-09-25T15:05:27,906 adding license file 'LICENSE.md' 2022-09-25T15:05:27,912 writing manifest file '/tmp/pip-pip-egg-info-d6_e0mi9/pyspk.egg-info/SOURCES.txt' 2022-09-25T15:05:28,132 Preparing metadata (setup.py): finished with status 'done' 2022-09-25T15:05:28,143 Source in /tmp/pip-wheel-_ajxs0bp/pyspk_422207f66a754e41b6972945f2ba11ae has version 1.0, which satisfies requirement pyspk==1.0 from https://files.pythonhosted.org/packages/a8/d2/0734e1e3790826d866e4d99bdc646fba69430f90883d2ba783b2ec83ec06/pyspk-1.0.tar.gz#sha256=9e198d00cee5101d60da4b5a5f75b36df3d4862b9766d3afc813b845fd03e901 2022-09-25T15:05:28,145 Removed pyspk==1.0 from https://files.pythonhosted.org/packages/a8/d2/0734e1e3790826d866e4d99bdc646fba69430f90883d2ba783b2ec83ec06/pyspk-1.0.tar.gz#sha256=9e198d00cee5101d60da4b5a5f75b36df3d4862b9766d3afc813b845fd03e901 from build tracker '/tmp/pip-build-tracker-p4d2xmrf' 2022-09-25T15:05:28,154 Created temporary directory: /tmp/pip-unpack-fjhvh4vl 2022-09-25T15:05:28,155 Building wheels for collected packages: pyspk 2022-09-25T15:05:28,165 Created temporary directory: /tmp/pip-wheel-9otgnozi 2022-09-25T15:05:28,165 Building wheel for pyspk (setup.py): started 2022-09-25T15:05:28,167 Destination directory: /tmp/pip-wheel-9otgnozi 2022-09-25T15:05:28,168 Running command python setup.py bdist_wheel 2022-09-25T15:05:30,766 # py-SP(k) - A hydrodynamical simulation-based model for the impact of baryon physics on the non-linear matter power spectrum 2022-09-25T15:05:30,767 _____ ____ ____ _ 2022-09-25T15:05:30,768 ____ __ __ / ___// __ \_/_/ /__| | 2022-09-25T15:05:30,768 / __ \/ / / /_____\__ \/ /_/ / // //_// / 2022-09-25T15:05:30,769 / /_/ / /_/ /_____/__/ / ____/ // ,< / / 2022-09-25T15:05:30,769 / .___/\__, / /____/_/ / //_/|_|/_/ 2022-09-25T15:05:30,769 /_/ /____/ |_| /_/ 2022-09-25T15:05:30,770 py-SP(k) is a python package aimed at predicting the suppression of the total matter power spectrum due to baryonic physics as a function of the baryon fraction of haloes and redshift. 2022-09-25T15:05:30,771 ### Requirements 2022-09-25T15:05:30,771 The module requires the following: 2022-09-25T15:05:30,772 - numpy 2022-09-25T15:05:30,772 - scipy 2022-09-25T15:05:30,773 ### Installation 2022-09-25T15:05:30,774 The easiest way to install py-SP(k) is using pip: 2022-09-25T15:05:30,774 ``` 2022-09-25T15:05:30,774 pip install pyspk [--user] 2022-09-25T15:05:30,775 ``` 2022-09-25T15:05:30,775 The --user flag may be required if you do not have root privileges. 2022-09-25T15:05:30,776 ### Usage 2022-09-25T15:05:30,777 A simple example: 2022-09-25T15:05:30,777 ``` 2022-09-25T15:05:30,777 import pyspk as spk 2022-09-25T15:05:30,778 z = 0.125 2022-09-25T15:05:30,778 fb_a = 8.44e-05 2022-09-25T15:05:30,779 fb_pow = 0.275 2022-09-25T15:05:30,779 k, sup = spk.sup_model(SO=200, z=z, fb_a=fb_a, fb_pow=fb_pow, k_max=10) 2022-09-25T15:05:30,780 ``` 2022-09-25T15:05:30,780 A jupyter notebook with more examples can be found within this [repository](https://github.com/jemme07/pyspk/blob/main/examples/pySPk_Examples.ipynb). 2022-09-25T15:05:30,781 ### Acknowledging the code 2022-09-25T15:05:30,782 Please cite spk using: 2022-09-25T15:05:30,782 ``` 2022-09-25T15:05:30,783 @ARTICLE{spk, 2022-09-25T15:05:30,783 author = {}, 2022-09-25T15:05:30,783 title = "{}", 2022-09-25T15:05:30,784 journal = {\mnras}, 2022-09-25T15:05:30,784 keywords = {}, 2022-09-25T15:05:30,784 year = , 2022-09-25T15:05:30,784 month = , 2022-09-25T15:05:30,785 volume = {}, 2022-09-25T15:05:30,785 number = {}, 2022-09-25T15:05:30,785 pages = {}, 2022-09-25T15:05:30,786 doi = {}, 2022-09-25T15:05:30,786 archivePrefix = {arXiv}, 2022-09-25T15:05:30,786 eprint = {}, 2022-09-25T15:05:30,786 primaryClass = {astro-ph.CO}, 2022-09-25T15:05:30,787 adsurl = {}, 2022-09-25T15:05:30,787 adsnote = {} 2022-09-25T15:05:30,787 } 2022-09-25T15:05:30,788 ``` 2022-09-25T15:05:30,788 For any questions and enquires please contact me via email at *j.salcidonegrete@ljmu.ac.uk* 2022-09-25T15:05:35,153 running bdist_wheel 2022-09-25T15:05:35,539 running build 2022-09-25T15:05:35,540 running build_py 2022-09-25T15:05:36,258 creating build 2022-09-25T15:05:36,259 creating build/lib 2022-09-25T15:05:36,261 creating build/lib/pyspk 2022-09-25T15:05:36,264 copying pyspk/__init__.py -> build/lib/pyspk 2022-09-25T15:05:36,268 copying pyspk/model.py -> build/lib/pyspk 2022-09-25T15:05:36,274 copying pyspk/fit_vals.py -> build/lib/pyspk 2022-09-25T15:05:36,277 running egg_info 2022-09-25T15:05:37,727 writing pyspk.egg-info/PKG-INFO 2022-09-25T15:05:38,313 writing dependency_links to pyspk.egg-info/dependency_links.txt 2022-09-25T15:05:41,241 writing requirements to pyspk.egg-info/requires.txt 2022-09-25T15:05:41,831 writing top-level names to pyspk.egg-info/top_level.txt 2022-09-25T15:05:41,966 reading manifest file 'pyspk.egg-info/SOURCES.txt' 2022-09-25T15:05:41,973 reading manifest template 'MANIFEST.in' 2022-09-25T15:05:41,985 adding license file 'LICENSE.md' 2022-09-25T15:05:41,991 writing manifest file 'pyspk.egg-info/SOURCES.txt' 2022-09-25T15:05:41,996 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:153: SetuptoolsDeprecationWarning: !! 2022-09-25T15:05:41,997 ############################ 2022-09-25T15:05:41,997 # Package would be ignored # 2022-09-25T15:05:41,998 ############################ 2022-09-25T15:05:41,998 Python recognizes 'pyspk.__pycache__' as an importable package, however it is 2022-09-25T15:05:41,998 included in the distribution as "data". 2022-09-25T15:05:41,999 This behavior is likely to change in future versions of setuptools (and 2022-09-25T15:05:41,999 therefore is considered deprecated). 2022-09-25T15:05:42,000 Please make sure that 'pyspk.__pycache__' is included as a package by using 2022-09-25T15:05:42,000 setuptools' `packages` configuration field or the proper discovery methods. 2022-09-25T15:05:42,001 You can read more about "package discovery" and "data files" on setuptools 2022-09-25T15:05:42,001 documentation page. 2022-09-25T15:05:42,002 !! 2022-09-25T15:05:42,003 check.warn(importable) 2022-09-25T15:05:42,003 copying pyspk/.DS_Store -> build/lib/pyspk 2022-09-25T15:05:42,006 copying pyspk/stat_errors_200.csv -> build/lib/pyspk 2022-09-25T15:05:42,020 copying pyspk/stat_errors_500.csv -> build/lib/pyspk 2022-09-25T15:05:42,035 creating build/lib/pyspk/__pycache__ 2022-09-25T15:05:42,036 copying pyspk/__pycache__/__init__.cpython-39.pyc -> build/lib/pyspk/__pycache__ 2022-09-25T15:05:42,040 copying pyspk/__pycache__/fit_vals.cpython-39.pyc -> build/lib/pyspk/__pycache__ 2022-09-25T15:05:42,044 copying pyspk/__pycache__/model.cpython-39.pyc -> build/lib/pyspk/__pycache__ 2022-09-25T15:05:42,774 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-09-25T15:05:42,775 setuptools.SetuptoolsDeprecationWarning, 2022-09-25T15:05:43,502 installing to build/bdist.linux-armv7l/wheel 2022-09-25T15:05:43,503 running install 2022-09-25T15:05:43,564 running install_lib 2022-09-25T15:05:44,288 creating build/bdist.linux-armv7l 2022-09-25T15:05:44,288 creating build/bdist.linux-armv7l/wheel 2022-09-25T15:05:44,291 creating build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,293 copying build/lib/pyspk/stat_errors_500.csv -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,307 copying build/lib/pyspk/__init__.py -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,311 creating build/bdist.linux-armv7l/wheel/pyspk/__pycache__ 2022-09-25T15:05:44,313 copying build/lib/pyspk/__pycache__/model.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/pyspk/__pycache__ 2022-09-25T15:05:44,317 copying build/lib/pyspk/__pycache__/fit_vals.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/pyspk/__pycache__ 2022-09-25T15:05:44,321 copying build/lib/pyspk/__pycache__/__init__.cpython-39.pyc -> build/bdist.linux-armv7l/wheel/pyspk/__pycache__ 2022-09-25T15:05:44,324 copying build/lib/pyspk/model.py -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,329 copying build/lib/pyspk/fit_vals.py -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,332 copying build/lib/pyspk/stat_errors_200.csv -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,346 copying build/lib/pyspk/.DS_Store -> build/bdist.linux-armv7l/wheel/pyspk 2022-09-25T15:05:44,349 running install_egg_info 2022-09-25T15:05:45,078 Copying pyspk.egg-info to build/bdist.linux-armv7l/wheel/pyspk-1.0-py3.7.egg-info 2022-09-25T15:05:45,099 running install_scripts 2022-09-25T15:05:45,301 adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*") 2022-09-25T15:05:45,311 creating build/bdist.linux-armv7l/wheel/pyspk-1.0.dist-info/WHEEL 2022-09-25T15:05:45,316 creating '/tmp/pip-wheel-9otgnozi/pyspk-1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-25T15:05:45,321 adding 'pyspk/.DS_Store' 2022-09-25T15:05:45,324 adding 'pyspk/__init__.py' 2022-09-25T15:05:45,327 adding 'pyspk/fit_vals.py' 2022-09-25T15:05:45,331 adding 'pyspk/model.py' 2022-09-25T15:05:45,421 adding 'pyspk/stat_errors_200.csv' 2022-09-25T15:05:45,513 adding 'pyspk/stat_errors_500.csv' 2022-09-25T15:05:45,520 adding 'pyspk/__pycache__/__init__.cpython-39.pyc' 2022-09-25T15:05:45,523 adding 'pyspk/__pycache__/fit_vals.cpython-39.pyc' 2022-09-25T15:05:45,528 adding 'pyspk/__pycache__/model.cpython-39.pyc' 2022-09-25T15:05:45,533 adding 'pyspk-1.0.dist-info/LICENSE.md' 2022-09-25T15:05:45,536 adding 'pyspk-1.0.dist-info/METADATA' 2022-09-25T15:05:45,538 adding 'pyspk-1.0.dist-info/WHEEL' 2022-09-25T15:05:45,539 adding 'pyspk-1.0.dist-info/top_level.txt' 2022-09-25T15:05:45,541 adding 'pyspk-1.0.dist-info/RECORD' 2022-09-25T15:05:45,549 removing build/bdist.linux-armv7l/wheel 2022-09-25T15:05:45,797 Building wheel for pyspk (setup.py): finished with status 'done' 2022-09-25T15:05:45,808 Created wheel for pyspk: filename=pyspk-1.0-py3-none-any.whl size=150897 sha256=cfc057fd75e4214b94b5938b6e9840b03b3933ac7e44d0c84e2ce139ee2f42da 2022-09-25T15:05:45,811 Stored in directory: /tmp/pip-ephem-wheel-cache-2f614z79/wheels/b2/98/a9/632a15b77c78776beb1c508bf488a4114ddbf57610affd5b2a 2022-09-25T15:05:45,834 Successfully built pyspk 2022-09-25T15:05:45,858 Removed build tracker: '/tmp/pip-build-tracker-p4d2xmrf'