2022-09-29T15:41:21,238 Created temporary directory: /tmp/pip-ephem-wheel-cache-s3xyvhpp 2022-09-29T15:41:21,244 Created temporary directory: /tmp/pip-build-tracker-aq997ark 2022-09-29T15:41:21,245 Initialized build tracking at /tmp/pip-build-tracker-aq997ark 2022-09-29T15:41:21,245 Created build tracker: /tmp/pip-build-tracker-aq997ark 2022-09-29T15:41:21,246 Entered build tracker: /tmp/pip-build-tracker-aq997ark 2022-09-29T15:41:21,247 Created temporary directory: /tmp/pip-wheel-_e8jpoe1 2022-09-29T15:41:21,311 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-29T15:41:21,319 2 location(s) to search for versions of bioontologies: 2022-09-29T15:41:21,319 * https://pypi.org/simple/bioontologies/ 2022-09-29T15:41:21,319 * https://www.piwheels.org/simple/bioontologies/ 2022-09-29T15:41:21,320 Fetching project page and analyzing links: https://pypi.org/simple/bioontologies/ 2022-09-29T15:41:21,321 Getting page https://pypi.org/simple/bioontologies/ 2022-09-29T15:41:21,325 Found index url https://pypi.org/simple 2022-09-29T15:41:21,521 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/02/70/0e872793ea49436026685bb3d51079af3947bb9a699e4ed5ff9550c83310/bioontologies-0.0.1-py3-none-any.whl#sha256=5072a0b9840de2b223ab07d7e645bbbb6df545a6248b1e9056144b47ebb0af2b (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,523 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e8/9d/8acb7f9144335763c181e32d20062cc121aa2faf6c7d00a44b57533cb766/bioontologies-0.0.1.tar.gz#sha256=8d638acb2eea4506dc531708b9f614d82db8c0b7964d81eff067e56bcf62557d (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,523 Skipping link: 0.0.1 Requires-Python >=3.8: https://files.pythonhosted.org/packages/e8/9d/8acb7f9144335763c181e32d20062cc121aa2faf6c7d00a44b57533cb766/bioontologies-0.0.1.tar.gz#sha256=8d638acb2eea4506dc531708b9f614d82db8c0b7964d81eff067e56bcf62557d (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,524 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/09/50/0e253b578e62eafa162c52627a5f737f83403f62253ce52f40415b75e7c8/bioontologies-0.0.2-py3-none-any.whl#sha256=4c7fa23f0c793d908ada4b66c2d055a55e66ce8b0e252ce8746c8eb4da1e038b (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,525 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/26/5e/66b7a336501576cd1abdec05eeba85455bf8dff4f57f4e7f0f51a1815b31/bioontologies-0.0.2.tar.gz#sha256=6479e9c4e629b0e130430ab8560384241929862a1af5ade721fbbe7762a8e7c2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,526 Skipping link: 0.0.2 Requires-Python >=3.8: https://files.pythonhosted.org/packages/26/5e/66b7a336501576cd1abdec05eeba85455bf8dff4f57f4e7f0f51a1815b31/bioontologies-0.0.2.tar.gz#sha256=6479e9c4e629b0e130430ab8560384241929862a1af5ade721fbbe7762a8e7c2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,526 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/f1/b4/e8645504342369e0d6600f6273507f8d629bd36445925f1efd76bd7ce189/bioontologies-0.0.3-py3-none-any.whl#sha256=e465dbce0f51014e7cb09b588d14d3b700b3899490a5ca47f0de776a1671fb66 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,528 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/89/18/7aef50c5fe0330315d874bad225d0c826e68d2a2a2fbaa749ebe025bd42a/bioontologies-0.0.3.tar.gz#sha256=c6c0eb605e5cf162a190ef2f0c8960384184bcc07730a6af048aff825615414c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,528 Skipping link: 0.0.3 Requires-Python >=3.8: https://files.pythonhosted.org/packages/89/18/7aef50c5fe0330315d874bad225d0c826e68d2a2a2fbaa749ebe025bd42a/bioontologies-0.0.3.tar.gz#sha256=c6c0eb605e5cf162a190ef2f0c8960384184bcc07730a6af048aff825615414c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,529 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/30/2c/9522cb9b1ce05156b116dce08c4488079059c73e42b26865503b130d83fd/bioontologies-0.0.4-py3-none-any.whl#sha256=320bfc75260a33895e9559fc573a5946281dbec93ed26d1d54c6398864607133 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,530 Found link https://files.pythonhosted.org/packages/7c/3b/7adedad217cbcf5fd1a182023db493943b7b07e38971e8a30b3c84802758/bioontologies-0.0.4.tar.gz#sha256=a624ee76a9712ccde10795091b3a583ee82194abaf3e589fe92701da3004b177 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.0.4 2022-09-29T15:41:21,531 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/b4/fa/d769f824f33305b01902985e08d42c22ede00839e1b7c59db3d3943c62ec/bioontologies-0.0.5-py3-none-any.whl#sha256=6d540f193226dfb47da940bd713f852c125d77312bc26109ad05d8c4f0218f71 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,532 Found link https://files.pythonhosted.org/packages/0d/f5/902b5d8471b8b9ae9491b07619159e365ab8bbd509c604a445a8d9e47433/bioontologies-0.0.5.tar.gz#sha256=21ddd45d8457027c9ba309952e401792b1ffc8bc3fb10c8c7dbe3b3f963716fe (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.0.5 2022-09-29T15:41:21,533 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/e6/d9/75a47d8460fac7bf8cadfd62fa5fb868214a3fadc91cdf83b75ca7b08f7f/bioontologies-0.1.0-py3-none-any.whl#sha256=1133d637760bdc2e624a82fa1c9fc2863e8abb275b991cd8ba3bc4c25864335c (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,534 Found link https://files.pythonhosted.org/packages/3a/61/e3a5584bec3fa16118f3834905aacd6d38984029c69459e47f7fdbbb6c7c/bioontologies-0.1.0.tar.gz#sha256=a351338096b34545eb0fab9bcc88ea12615696640f158441e8f919037812043a (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.1.0 2022-09-29T15:41:21,535 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/e4/f5/c66135d5f4737c398395950cfdeaa6793af6474308714bc3984c82feaf86/bioontologies-0.1.1-py3-none-any.whl#sha256=5371ac6455629fad3b76ab1aaac9d36036dd62e460a8c219ff85adefdd8e31a2 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,536 Found link https://files.pythonhosted.org/packages/48/59/a9863e733647722d56d58472671f91dc2f08ed5bbb028029fea6f5bd737c/bioontologies-0.1.1.tar.gz#sha256=d9e0d705e6282d5d3d15ad6f85aac85588b56a5814d8ab6787cf816e97cc2c13 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.1.1 2022-09-29T15:41:21,537 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/85/b6/6d6b59f50e59573263b4a0a7e50256f0e210c5ab90ce8295d2206fddf51d/bioontologies-0.1.2-py3-none-any.whl#sha256=8ea308a770894415eedf4b4a37e2d7e339e7b0e6e947f234165cccea1e00ba6f (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,538 Found link https://files.pythonhosted.org/packages/fd/4e/dde985f17ac6586c578ab9d42be5de724a700215d138d4f3b37cc3016af5/bioontologies-0.1.2.tar.gz#sha256=1a3b2ae21b282314a10c09e584fbe6ce70dbfb522031bd6af9b8b44fcf6f963a (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.1.2 2022-09-29T15:41:21,539 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/b4/11/63bdf16d654ed79ec6ff8e4c01d9c8df9935042578f967426f6455e2ca9b/bioontologies-0.2.0-py3-none-any.whl#sha256=d71cec7a59a15fb35dc74b2caa86ec119dd354469d39e708510cec59cc65eebe (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,540 Found link https://files.pythonhosted.org/packages/51/3d/4d3e5dcbbc810a2934661f432d99cc6f40142c401210a43124f2d7a52922/bioontologies-0.2.0.tar.gz#sha256=e5e1749e8784c0b363d3e2bcc8494ca666ac26aa5c18e038b2fa0c29647044e6 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.2.0 2022-09-29T15:41:21,541 Skipping link: No binaries permitted for bioontologies: https://files.pythonhosted.org/packages/f8/50/71462c82630c8566bbcccc62b14b7a7a0416f8c4cb594a8d1e6e8726740f/bioontologies-0.2.1-py3-none-any.whl#sha256=b3f89323cfebe8df24a69296299d62aacb7d6fc4cdf508a96088e2dac74c1ce8 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,542 Found link https://files.pythonhosted.org/packages/3a/03/a44c975e94ef6f83712cbce65a991ea200b596eae2cf33936a4aa1302b5e/bioontologies-0.2.1.tar.gz#sha256=b23c5f588fe96fbc90c4331e0df757febfa75e96aa2ad2757363fa06dfe87d13 (from https://pypi.org/simple/bioontologies/) (requires-python:>=3.7), version: 0.2.1 2022-09-29T15:41:21,544 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioontologies/ 2022-09-29T15:41:21,544 Getting page https://www.piwheels.org/simple/bioontologies/ 2022-09-29T15:41:21,546 Found index url https://www.piwheels.org/simple 2022-09-29T15:41:21,822 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.2.0-py3-none-any.whl#sha256=5d2800b7db40c68047ec3abf2321dd9d886a084933750248802466b881ff4267 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,822 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.1.2-py3-none-any.whl#sha256=52be2ed3e28c13efdaa5197f792e041f4ba806c86259b176318a867a39bdb0d8 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,823 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.1.1-py3-none-any.whl#sha256=88d6734db023167440ca13719d9900571fed79570cffb5c77594885ee21180b7 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,824 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.1.0-py3-none-any.whl#sha256=6b2521788855b76e2f16e3ec55bcbe578508c5e860badaa6f5fb3ae85a665648 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,824 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.5-py3-none-any.whl#sha256=d3bf993999fa7233d2cc31a0fb44bcb35b3d96c91c4e658a2ee1df703edc990f (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,825 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.4-py3-none-any.whl#sha256=66bef33f75863d0e93f29b8a0dc2aadbbd63ce22ad7154c1d2a7f418ef5f5d4c (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.7) 2022-09-29T15:41:21,825 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.3-py3-none-any.whl#sha256=b5867e31daa04edec6c19aefe40d2fb800c6dc6e3efeeb648ff9705976b5ff3e (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,825 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.2-py3-none-any.whl#sha256=15a6029a370c2eb76d9c80ab6a4a61f34d97c2336cc3cde43a7d9d33a60a4328 (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,826 Skipping link: No binaries permitted for bioontologies: https://www.piwheels.org/simple/bioontologies/bioontologies-0.0.1-py3-none-any.whl#sha256=451449226ac2c5784b10d63cdb52cea7fcc466897d1cc58bc103c14aa3f3234c (from https://www.piwheels.org/simple/bioontologies/) (requires-python:>=3.8) 2022-09-29T15:41:21,827 Skipping link: not a file: https://www.piwheels.org/simple/bioontologies/ 2022-09-29T15:41:21,827 Skipping link: not a file: https://pypi.org/simple/bioontologies/ 2022-09-29T15:41:21,864 Given no hashes to check 1 links for project 'bioontologies': discarding no candidates 2022-09-29T15:41:21,895 Collecting bioontologies==0.2.1 2022-09-29T15:41:21,900 Created temporary directory: /tmp/pip-unpack-0lpqx7sl 2022-09-29T15:41:22,151 Downloading bioontologies-0.2.1.tar.gz (36 kB) 2022-09-29T15:41:22,336 Added bioontologies==0.2.1 from https://files.pythonhosted.org/packages/3a/03/a44c975e94ef6f83712cbce65a991ea200b596eae2cf33936a4aa1302b5e/bioontologies-0.2.1.tar.gz#sha256=b23c5f588fe96fbc90c4331e0df757febfa75e96aa2ad2757363fa06dfe87d13 to build tracker '/tmp/pip-build-tracker-aq997ark' 2022-09-29T15:41:22,346 Created temporary directory: /tmp/pip-build-env-5wxyal79 2022-09-29T15:41:22,360 Created temporary directory: /tmp/pip-standalone-pip-m62s6k50 2022-09-29T15:41:24,522 Installing build dependencies: started 2022-09-29T15:41:24,525 Running command pip subprocess to install build dependencies 2022-09-29T15:41:34,092 Using pip 22.1.2 from /tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip (python 3.7) 2022-09-29T15:41:36,085 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-09-29T15:41:40,812 Collecting setuptools 2022-09-29T15:41:41,084 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.4.0-py3-none-any.whl (1.2 MB) 2022-09-29T15:41:41,754 Collecting wheel 2022-09-29T15:41:41,788 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-09-29T15:41:55,952 Installing collected packages: wheel, setuptools 2022-09-29T15:41:56,224 Creating /tmp/pip-build-env-5wxyal79/overlay/bin 2022-09-29T15:41:56,230 changing mode of /tmp/pip-build-env-5wxyal79/overlay/bin/wheel to 755 2022-09-29T15:42:01,057 Successfully installed setuptools-65.4.0 wheel-0.37.1 2022-09-29T15:42:01,304 --- Logging error --- 2022-09-29T15:42:01,304 Traceback (most recent call last): 2022-09-29T15:42:01,305 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/utils/logging.py", line 177, in emit 2022-09-29T15:42:01,305 self.console.print(renderable, overflow="ignore", crop=False, style=style) 2022-09-29T15:42:01,306 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_vendor/rich/console.py", line 1752, in print 2022-09-29T15:42:01,306 extend(render(renderable, render_options)) 2022-09-29T15:42:01,306 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_vendor/rich/console.py", line 1390, in render 2022-09-29T15:42:01,307 for render_output in iter_render: 2022-09-29T15:42:01,307 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/utils/logging.py", line 134, in __rich_console__ 2022-09-29T15:42:01,307 for line in lines: 2022-09-29T15:42:01,308 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_vendor/rich/segment.py", line 245, in split_lines 2022-09-29T15:42:01,308 for segment in segments: 2022-09-29T15:42:01,308 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_vendor/rich/console.py", line 1368, in render 2022-09-29T15:42:01,309 renderable = rich_cast(renderable) 2022-09-29T15:42:01,309 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_vendor/rich/protocol.py", line 36, in rich_cast 2022-09-29T15:42:01,309 renderable = cast_method() 2022-09-29T15:42:01,310 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 130, in __rich__ 2022-09-29T15:42:01,310 pip_cmd = get_best_invocation_for_this_pip() 2022-09-29T15:42:01,310 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/utils/entrypoints.py", line 60, in get_best_invocation_for_this_pip 2022-09-29T15:42:01,311 os.path.join(binary_prefix, exe_name), 2022-09-29T15:42:01,311 File "/usr/lib/python3.7/genericpath.py", line 97, in samefile 2022-09-29T15:42:01,311 s2 = os.stat(f2) 2022-09-29T15:42:01,311 FileNotFoundError: [Errno 2] No such file or directory: '/usr/bin/pip3.7' 2022-09-29T15:42:01,312 Call stack: 2022-09-29T15:42:01,312 File "/usr/lib/python3.7/runpy.py", line 193, in _run_module_as_main 2022-09-29T15:42:01,312 "__main__", mod_spec) 2022-09-29T15:42:01,313 File "/usr/lib/python3.7/runpy.py", line 85, in _run_code 2022-09-29T15:42:01,313 exec(code, run_globals) 2022-09-29T15:42:01,314 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/__main__.py", line 31, in 2022-09-29T15:42:01,314 sys.exit(_main()) 2022-09-29T15:42:01,314 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/cli/main.py", line 70, in main 2022-09-29T15:42:01,314 return command.main(cmd_args) 2022-09-29T15:42:01,315 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/cli/base_command.py", line 101, in main 2022-09-29T15:42:01,315 return self._main(args) 2022-09-29T15:42:01,315 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/cli/base_command.py", line 223, in _main 2022-09-29T15:42:01,316 self.handle_pip_version_check(options) 2022-09-29T15:42:01,316 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/cli/req_command.py", line 148, in handle_pip_version_check 2022-09-29T15:42:01,316 pip_self_version_check(session, options) 2022-09-29T15:42:01,317 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/self_outdated_check.py", line 237, in pip_self_version_check 2022-09-29T15:42:01,317 logger.info("[present-rich] %s", upgrade_prompt) 2022-09-29T15:42:01,317 File "/usr/lib/python3.7/logging/__init__.py", line 1383, in info 2022-09-29T15:42:01,318 self._log(INFO, msg, args, **kwargs) 2022-09-29T15:42:01,318 File "/usr/lib/python3.7/logging/__init__.py", line 1519, in _log 2022-09-29T15:42:01,318 self.handle(record) 2022-09-29T15:42:01,319 File "/usr/lib/python3.7/logging/__init__.py", line 1529, in handle 2022-09-29T15:42:01,319 self.callHandlers(record) 2022-09-29T15:42:01,319 File "/usr/lib/python3.7/logging/__init__.py", line 1591, in callHandlers 2022-09-29T15:42:01,319 hdlr.handle(record) 2022-09-29T15:42:01,320 File "/usr/lib/python3.7/logging/__init__.py", line 905, in handle 2022-09-29T15:42:01,320 self.emit(record) 2022-09-29T15:42:01,320 File "/tmp/pip-standalone-pip-m62s6k50/__env_pip__.zip/pip/_internal/utils/logging.py", line 179, in emit 2022-09-29T15:42:01,321 self.handleError(record) 2022-09-29T15:42:01,321 Message: '[present-rich] %s' 2022-09-29T15:42:01,321 Arguments: (UpgradePrompt(old='22.1.2', new='22.2.2'),) 2022-09-29T15:42:01,815 Installing build dependencies: finished with status 'done' 2022-09-29T15:42:01,841 Getting requirements to build wheel: started 2022-09-29T15:42:01,844 Running command Getting requirements to build wheel 2022-09-29T15:42:06,895 running egg_info 2022-09-29T15:42:07,518 writing src/bioontologies.egg-info/PKG-INFO 2022-09-29T15:42:08,107 writing dependency_links to src/bioontologies.egg-info/dependency_links.txt 2022-09-29T15:42:09,866 writing entry points to src/bioontologies.egg-info/entry_points.txt 2022-09-29T15:42:11,042 writing requirements to src/bioontologies.egg-info/requires.txt 2022-09-29T15:42:11,634 writing top-level names to src/bioontologies.egg-info/top_level.txt 2022-09-29T15:42:12,359 reading manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:12,368 reading manifest template 'MANIFEST.in' 2022-09-29T15:42:12,377 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-09-29T15:42:12,378 warnings.warn(msg, warning_class) 2022-09-29T15:42:12,378 no previously-included directories found matching 'scripts' 2022-09-29T15:42:12,379 no previously-included directories found matching 'notebooks' 2022-09-29T15:42:12,380 no previously-included directories found matching 'tests/.pytest_cache' 2022-09-29T15:42:12,398 warning: no files found matching '*.png' under directory 'docs/source' 2022-09-29T15:42:12,400 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-09-29T15:42:12,401 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-09-29T15:42:12,402 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-09-29T15:42:12,404 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-09-29T15:42:12,405 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-09-29T15:42:12,406 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-09-29T15:42:12,408 warning: no previously-included files found matching 'tox.ini' 2022-09-29T15:42:12,408 warning: no previously-included files found matching '.flake8' 2022-09-29T15:42:12,409 warning: no previously-included files found matching '.bumpversion.cfg' 2022-09-29T15:42:12,410 warning: no previously-included files found matching '.readthedocs.yml' 2022-09-29T15:42:12,411 adding license file 'LICENSE' 2022-09-29T15:42:12,418 writing manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:12,638 Getting requirements to build wheel: finished with status 'done' 2022-09-29T15:42:12,658 Created temporary directory: /tmp/pip-modern-metadata-hlc3hrvj 2022-09-29T15:42:12,664 Preparing metadata (pyproject.toml): started 2022-09-29T15:42:12,666 Running command Preparing metadata (pyproject.toml) 2022-09-29T15:42:17,403 running dist_info 2022-09-29T15:42:18,069 creating /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info 2022-09-29T15:42:18,709 writing /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/PKG-INFO 2022-09-29T15:42:19,318 writing dependency_links to /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/dependency_links.txt 2022-09-29T15:42:21,142 writing entry points to /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/entry_points.txt 2022-09-29T15:42:22,359 writing requirements to /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/requires.txt 2022-09-29T15:42:22,971 writing top-level names to /tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/top_level.txt 2022-09-29T15:42:22,973 writing manifest file '/tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:23,701 reading manifest file '/tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:23,704 reading manifest template 'MANIFEST.in' 2022-09-29T15:42:23,715 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-09-29T15:42:23,716 warnings.warn(msg, warning_class) 2022-09-29T15:42:23,716 no previously-included directories found matching 'scripts' 2022-09-29T15:42:23,717 no previously-included directories found matching 'notebooks' 2022-09-29T15:42:23,718 no previously-included directories found matching 'tests/.pytest_cache' 2022-09-29T15:42:23,735 warning: no files found matching '*.png' under directory 'docs/source' 2022-09-29T15:42:23,737 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-09-29T15:42:23,738 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-09-29T15:42:23,739 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-09-29T15:42:23,740 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-09-29T15:42:23,741 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-09-29T15:42:23,743 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-09-29T15:42:23,744 warning: no previously-included files found matching 'tox.ini' 2022-09-29T15:42:23,745 warning: no previously-included files found matching '.flake8' 2022-09-29T15:42:23,746 warning: no previously-included files found matching '.bumpversion.cfg' 2022-09-29T15:42:23,746 warning: no previously-included files found matching '.readthedocs.yml' 2022-09-29T15:42:23,747 adding license file 'LICENSE' 2022-09-29T15:42:23,754 writing manifest file '/tmp/pip-modern-metadata-hlc3hrvj/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:23,756 creating '/tmp/pip-modern-metadata-hlc3hrvj/bioontologies-0.2.1.dist-info' 2022-09-29T15:42:24,243 Preparing metadata (pyproject.toml): finished with status 'done' 2022-09-29T15:42:24,259 Source in /tmp/pip-wheel-_e8jpoe1/bioontologies_5c018ca03b0a44548a0e72b8d24eb375 has version 0.2.1, which satisfies requirement bioontologies==0.2.1 from https://files.pythonhosted.org/packages/3a/03/a44c975e94ef6f83712cbce65a991ea200b596eae2cf33936a4aa1302b5e/bioontologies-0.2.1.tar.gz#sha256=b23c5f588fe96fbc90c4331e0df757febfa75e96aa2ad2757363fa06dfe87d13 2022-09-29T15:42:24,262 Removed bioontologies==0.2.1 from https://files.pythonhosted.org/packages/3a/03/a44c975e94ef6f83712cbce65a991ea200b596eae2cf33936a4aa1302b5e/bioontologies-0.2.1.tar.gz#sha256=b23c5f588fe96fbc90c4331e0df757febfa75e96aa2ad2757363fa06dfe87d13 from build tracker '/tmp/pip-build-tracker-aq997ark' 2022-09-29T15:42:24,277 Created temporary directory: /tmp/pip-unpack-oaelbwal 2022-09-29T15:42:24,279 Building wheels for collected packages: bioontologies 2022-09-29T15:42:24,288 Created temporary directory: /tmp/pip-wheel-yvqifoh3 2022-09-29T15:42:24,289 Destination directory: /tmp/pip-wheel-yvqifoh3 2022-09-29T15:42:24,294 Building wheel for bioontologies (pyproject.toml): started 2022-09-29T15:42:24,296 Running command Building wheel for bioontologies (pyproject.toml) 2022-09-29T15:42:28,450 running bdist_wheel 2022-09-29T15:42:29,673 running build 2022-09-29T15:42:29,674 running build_py 2022-09-29T15:42:30,314 creating build 2022-09-29T15:42:30,315 creating build/lib 2022-09-29T15:42:30,316 creating build/lib/bioontologies 2022-09-29T15:42:30,319 copying src/bioontologies/obograph.py -> build/lib/bioontologies 2022-09-29T15:42:30,324 copying src/bioontologies/__main__.py -> build/lib/bioontologies 2022-09-29T15:42:30,328 copying src/bioontologies/version.py -> build/lib/bioontologies 2022-09-29T15:42:30,332 copying src/bioontologies/cli.py -> build/lib/bioontologies 2022-09-29T15:42:30,336 copying src/bioontologies/robot.py -> build/lib/bioontologies 2022-09-29T15:42:30,340 copying src/bioontologies/__init__.py -> build/lib/bioontologies 2022-09-29T15:42:30,345 creating build/lib/bioontologies/upgrade 2022-09-29T15:42:30,347 copying src/bioontologies/upgrade/import_debio.py -> build/lib/bioontologies/upgrade 2022-09-29T15:42:30,351 copying src/bioontologies/upgrade/__init__.py -> build/lib/bioontologies/upgrade 2022-09-29T15:42:30,355 creating build/lib/bioontologies/relations 2022-09-29T15:42:30,357 copying src/bioontologies/relations/api.py -> build/lib/bioontologies/relations 2022-09-29T15:42:30,361 copying src/bioontologies/relations/__init__.py -> build/lib/bioontologies/relations 2022-09-29T15:42:30,364 running egg_info 2022-09-29T15:42:31,627 writing src/bioontologies.egg-info/PKG-INFO 2022-09-29T15:42:32,263 writing dependency_links to src/bioontologies.egg-info/dependency_links.txt 2022-09-29T15:42:34,025 writing entry points to src/bioontologies.egg-info/entry_points.txt 2022-09-29T15:42:35,204 writing requirements to src/bioontologies.egg-info/requires.txt 2022-09-29T15:42:35,795 writing top-level names to src/bioontologies.egg-info/top_level.txt 2022-09-29T15:42:35,842 reading manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:35,851 reading manifest template 'MANIFEST.in' 2022-09-29T15:42:35,859 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-09-29T15:42:35,859 warnings.warn(msg, warning_class) 2022-09-29T15:42:35,860 no previously-included directories found matching 'scripts' 2022-09-29T15:42:35,860 no previously-included directories found matching 'notebooks' 2022-09-29T15:42:35,861 no previously-included directories found matching 'tests/.pytest_cache' 2022-09-29T15:42:35,879 warning: no files found matching '*.png' under directory 'docs/source' 2022-09-29T15:42:35,881 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2022-09-29T15:42:35,882 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-09-29T15:42:35,883 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-09-29T15:42:35,885 warning: no previously-included files matching '*.dylib' found anywhere in distribution 2022-09-29T15:42:35,886 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2022-09-29T15:42:35,887 warning: no previously-included files matching '*.gpickle' found anywhere in distribution 2022-09-29T15:42:35,889 warning: no previously-included files found matching 'tox.ini' 2022-09-29T15:42:35,889 warning: no previously-included files found matching '.flake8' 2022-09-29T15:42:35,890 warning: no previously-included files found matching '.bumpversion.cfg' 2022-09-29T15:42:35,891 warning: no previously-included files found matching '.readthedocs.yml' 2022-09-29T15:42:35,892 adding license file 'LICENSE' 2022-09-29T15:42:35,899 writing manifest file 'src/bioontologies.egg-info/SOURCES.txt' 2022-09-29T15:42:35,905 copying src/bioontologies/py.typed -> build/lib/bioontologies 2022-09-29T15:42:35,909 copying src/bioontologies/upgrade/data.tsv -> build/lib/bioontologies/upgrade 2022-09-29T15:42:35,914 copying src/bioontologies/relations/data.json -> build/lib/bioontologies/relations 2022-09-29T15:42:37,185 installing to build/bdist.linux-armv7l/wheel 2022-09-29T15:42:37,185 running install 2022-09-29T15:42:37,245 running install_lib 2022-09-29T15:42:37,878 creating build/bdist.linux-armv7l 2022-09-29T15:42:37,879 creating build/bdist.linux-armv7l/wheel 2022-09-29T15:42:37,882 creating build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,884 copying build/lib/bioontologies/obograph.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,891 copying build/lib/bioontologies/__main__.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,894 copying build/lib/bioontologies/version.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,899 creating build/bdist.linux-armv7l/wheel/bioontologies/upgrade 2022-09-29T15:42:37,901 copying build/lib/bioontologies/upgrade/import_debio.py -> build/bdist.linux-armv7l/wheel/bioontologies/upgrade 2022-09-29T15:42:37,905 copying build/lib/bioontologies/upgrade/data.tsv -> build/bdist.linux-armv7l/wheel/bioontologies/upgrade 2022-09-29T15:42:37,909 copying build/lib/bioontologies/upgrade/__init__.py -> build/bdist.linux-armv7l/wheel/bioontologies/upgrade 2022-09-29T15:42:37,912 copying build/lib/bioontologies/cli.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,916 copying build/lib/bioontologies/robot.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,921 copying build/lib/bioontologies/__init__.py -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,926 creating build/bdist.linux-armv7l/wheel/bioontologies/relations 2022-09-29T15:42:37,927 copying build/lib/bioontologies/relations/data.json -> build/bdist.linux-armv7l/wheel/bioontologies/relations 2022-09-29T15:42:37,937 copying build/lib/bioontologies/relations/api.py -> build/bdist.linux-armv7l/wheel/bioontologies/relations 2022-09-29T15:42:37,941 copying build/lib/bioontologies/relations/__init__.py -> build/bdist.linux-armv7l/wheel/bioontologies/relations 2022-09-29T15:42:37,944 copying build/lib/bioontologies/py.typed -> build/bdist.linux-armv7l/wheel/bioontologies 2022-09-29T15:42:37,947 running install_egg_info 2022-09-29T15:42:38,585 Copying src/bioontologies.egg-info to build/bdist.linux-armv7l/wheel/bioontologies-0.2.1-py3.7.egg-info 2022-09-29T15:42:38,612 running install_scripts 2022-09-29T15:42:38,814 creating build/bdist.linux-armv7l/wheel/bioontologies-0.2.1.dist-info/WHEEL 2022-09-29T15:42:38,819 creating '/tmp/pip-wheel-yvqifoh3/tmpgqya9j31/bioontologies-0.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-09-29T15:42:38,824 adding 'bioontologies/__init__.py' 2022-09-29T15:42:38,826 adding 'bioontologies/__main__.py' 2022-09-29T15:42:38,829 adding 'bioontologies/cli.py' 2022-09-29T15:42:38,835 adding 'bioontologies/obograph.py' 2022-09-29T15:42:38,838 adding 'bioontologies/py.typed' 2022-09-29T15:42:38,841 adding 'bioontologies/robot.py' 2022-09-29T15:42:38,844 adding 'bioontologies/version.py' 2022-09-29T15:42:38,847 adding 'bioontologies/relations/__init__.py' 2022-09-29T15:42:38,850 adding 'bioontologies/relations/api.py' 2022-09-29T15:42:38,864 adding 'bioontologies/relations/data.json' 2022-09-29T15:42:38,870 adding 'bioontologies/upgrade/__init__.py' 2022-09-29T15:42:38,874 adding 'bioontologies/upgrade/data.tsv' 2022-09-29T15:42:38,876 adding 'bioontologies/upgrade/import_debio.py' 2022-09-29T15:42:38,881 adding 'bioontologies-0.2.1.dist-info/LICENSE' 2022-09-29T15:42:38,885 adding 'bioontologies-0.2.1.dist-info/METADATA' 2022-09-29T15:42:38,887 adding 'bioontologies-0.2.1.dist-info/WHEEL' 2022-09-29T15:42:38,888 adding 'bioontologies-0.2.1.dist-info/entry_points.txt' 2022-09-29T15:42:38,890 adding 'bioontologies-0.2.1.dist-info/top_level.txt' 2022-09-29T15:42:38,892 adding 'bioontologies-0.2.1.dist-info/RECORD' 2022-09-29T15:42:38,895 removing build/bdist.linux-armv7l/wheel 2022-09-29T15:42:39,169 Building wheel for bioontologies (pyproject.toml): finished with status 'done' 2022-09-29T15:42:39,182 Created wheel for bioontologies: filename=bioontologies-0.2.1-py3-none-any.whl size=31387 sha256=cb90edb79591540b515d6c6a982c2d8313557a02ce707a2fa1b26d506bd3a786 2022-09-29T15:42:39,184 Stored in directory: /tmp/pip-ephem-wheel-cache-s3xyvhpp/wheels/ec/5e/35/4172b5ed848698dce07a2de250348811cb0d67abb2f3f00b70 2022-09-29T15:42:39,209 Successfully built bioontologies 2022-09-29T15:42:39,218 Removed build tracker: '/tmp/pip-build-tracker-aq997ark'