2022-10-04T12:25:21,186 Created temporary directory: /tmp/pip-ephem-wheel-cache-irj37c5x
2022-10-04T12:25:21,192 Created temporary directory: /tmp/pip-build-tracker-8lik02qa
2022-10-04T12:25:21,193 Initialized build tracking at /tmp/pip-build-tracker-8lik02qa
2022-10-04T12:25:21,193 Created build tracker: /tmp/pip-build-tracker-8lik02qa
2022-10-04T12:25:21,193 Entered build tracker: /tmp/pip-build-tracker-8lik02qa
2022-10-04T12:25:21,194 Created temporary directory: /tmp/pip-wheel-asn9fnfh
2022-10-04T12:25:21,265 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-04T12:25:21,273 2 location(s) to search for versions of capice:
2022-10-04T12:25:21,273 * https://pypi.org/simple/capice/
2022-10-04T12:25:21,273 * https://www.piwheels.org/simple/capice/
2022-10-04T12:25:21,274 Fetching project page and analyzing links: https://pypi.org/simple/capice/
2022-10-04T12:25:21,275 Getting page https://pypi.org/simple/capice/
2022-10-04T12:25:21,279 Found index url https://pypi.org/simple
2022-10-04T12:25:21,403   Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0
2022-10-04T12:25:21,404   Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz#sha256=b5eb8501028078b58b078728cb5927d30f736dec35d8d17784807fb18bece558 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1
2022-10-04T12:25:21,406   Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz#sha256=fd1c7a04ef0b10576b9843cecc7a188c20ae39edb4ed4a8fec27c8abc13d23f4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2
2022-10-04T12:25:21,407   Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz#sha256=331d26cc87603dd46c81b0d670c6c27566c204ef5f68a150de9dced4d4d46018 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3
2022-10-04T12:25:21,409   Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz#sha256=367c328ad9259ebe6610ea4e335d073cad41187bef8d7461ee2c936f9f66de26 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4
2022-10-04T12:25:21,410   Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz#sha256=a50e36cca3b5152d62d295cd04dc7d30cd4f1ef9d8fa57e22e248fc525b1c3eb (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0
2022-10-04T12:25:21,411   Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz#sha256=dea305de80545a7a0dbf2beac54412500af956d0d02d214fc50dd31dd4af8e95 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0
2022-10-04T12:25:21,413   Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz#sha256=0790bb06d06ebfd6b8314ed31fbb06c31caac1a85a51d4c837efdc060886df4f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1
2022-10-04T12:25:21,414   Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz#sha256=244c612dd6058df96b21011a5460e69ef9b887dedf64fa7526cd65538c3c39a9 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2
2022-10-04T12:25:21,415   Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz#sha256=23bafed2b9bf8b449d4cc33c058b06d50665be06bfeb856f5c59713e20a515b4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0
2022-10-04T12:25:21,417   Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1
2022-10-04T12:25:21,418   Found link https://files.pythonhosted.org/packages/8e/ec/a0d20fce261cadb53b7674ce6d83f21587812c3d7ed4552c2876e32401b2/capice-3.3.0.tar.gz#sha256=8f4987e84311eafa4e58e7e529bb11fa2b4f0b323b2688642c755d41e87254a4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.3.0
2022-10-04T12:25:21,420   Found link https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc1
2022-10-04T12:25:21,421   Found link https://files.pythonhosted.org/packages/c8/d4/0b8b9a2459e3bf9ac9ee9fbbfcef0cf633423cd1164d247ef5b35e6bcc1d/capice-4.0.0rc2.tar.gz#sha256=f32081a09582111b1e4f6103819e003122a05ccb0a1872d9035d06bfd0edee9f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc2
2022-10-04T12:25:21,422   Found link https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz#sha256=d4f5f3d12d40201f8029a1e49e97c0fb2cd42fbb3ed9a9ac5e2981e8175fdb7e (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc3
2022-10-04T12:25:21,423 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/
2022-10-04T12:25:21,424 Getting page https://www.piwheels.org/simple/capice/
2022-10-04T12:25:21,426 Found index url https://www.piwheels.org/simple
2022-10-04T12:25:23,684   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc2-py3-none-any.whl#sha256=9edddaa9ec8bdd22de63608d73b375f392d24b4b24a3140e339b90f4526b336f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,685   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc1-py3-none-any.whl#sha256=2ffdc4d32ff14ea03e7417e65ac6f49c3fb84ebc8a2b0e904801a4762469b21c (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,685   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.3.0-py3-none-any.whl#sha256=b9a9a3cdfdb1ab474a6183c643babd3470fa84e8c5e3b2c8099a9ffee1c41956 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,686   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.1-py3-none-any.whl#sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,686   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,687   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,687   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,688   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,688   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,689   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,689   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,690   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8)
2022-10-04T12:25:23,690   Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7)
2022-10-04T12:25:23,691 Skipping link: not a file: https://www.piwheels.org/simple/capice/
2022-10-04T12:25:23,691 Skipping link: not a file: https://pypi.org/simple/capice/
2022-10-04T12:25:23,742 Given no hashes to check 1 links for project 'capice': discarding no candidates
2022-10-04T12:25:23,783 Collecting capice==4.0.0rc3
2022-10-04T12:25:23,788   Created temporary directory: /tmp/pip-unpack-201j1lkb
2022-10-04T12:25:24,017   Downloading capice-4.0.0rc3.tar.gz (35 kB)
2022-10-04T12:25:24,295   Added capice==4.0.0rc3 from https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz#sha256=d4f5f3d12d40201f8029a1e49e97c0fb2cd42fbb3ed9a9ac5e2981e8175fdb7e to build tracker '/tmp/pip-build-tracker-8lik02qa'
2022-10-04T12:25:24,299   Running setup.py (path:/tmp/pip-wheel-asn9fnfh/capice_fafbfc859b4948d2bf7a36f0dd9dded4/setup.py) egg_info for package capice
2022-10-04T12:25:24,300   Created temporary directory: /tmp/pip-pip-egg-info-nebahxu2
2022-10-04T12:25:24,301   Preparing metadata (setup.py): started
2022-10-04T12:25:24,303   Running command python setup.py egg_info
2022-10-04T12:25:32,002   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing '4.0.0-rc3' to '4.0.0rc3'
2022-10-04T12:25:32,004     warnings.warn(tmpl.format(**locals()))
2022-10-04T12:25:32,780   running egg_info
2022-10-04T12:25:32,786   creating /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info
2022-10-04T12:25:33,468   writing /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/PKG-INFO
2022-10-04T12:25:34,042   writing dependency_links to /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/dependency_links.txt
2022-10-04T12:25:35,725   writing entry points to /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/entry_points.txt
2022-10-04T12:25:36,848   writing requirements to /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/requires.txt
2022-10-04T12:25:37,405   writing top-level names to /tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/top_level.txt
2022-10-04T12:25:37,408   writing manifest file '/tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/SOURCES.txt'
2022-10-04T12:25:38,239   package init file 'src/molgenis/__init__.py' not found (or not a regular file)
2022-10-04T12:25:38,394   reading manifest file '/tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/SOURCES.txt'
2022-10-04T12:25:38,397   adding license file 'LICENSE'
2022-10-04T12:25:38,406   writing manifest file '/tmp/pip-pip-egg-info-nebahxu2/capice.egg-info/SOURCES.txt'
2022-10-04T12:25:38,620   Preparing metadata (setup.py): finished with status 'done'
2022-10-04T12:25:38,633   Source in /tmp/pip-wheel-asn9fnfh/capice_fafbfc859b4948d2bf7a36f0dd9dded4 has version 4.0.0rc3, which satisfies requirement capice==4.0.0rc3 from https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz#sha256=d4f5f3d12d40201f8029a1e49e97c0fb2cd42fbb3ed9a9ac5e2981e8175fdb7e
2022-10-04T12:25:38,635   Removed capice==4.0.0rc3 from https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz#sha256=d4f5f3d12d40201f8029a1e49e97c0fb2cd42fbb3ed9a9ac5e2981e8175fdb7e from build tracker '/tmp/pip-build-tracker-8lik02qa'
2022-10-04T12:25:38,651 Created temporary directory: /tmp/pip-unpack-9wj92hry
2022-10-04T12:25:38,652 Building wheels for collected packages: capice
2022-10-04T12:25:38,662   Created temporary directory: /tmp/pip-wheel-q4v5bl6m
2022-10-04T12:25:38,663   Building wheel for capice (setup.py): started
2022-10-04T12:25:38,665   Destination directory: /tmp/pip-wheel-q4v5bl6m
2022-10-04T12:25:38,665   Running command python setup.py bdist_wheel
2022-10-04T12:25:46,292   /usr/local/lib/python3.9/dist-packages/setuptools/dist.py:531: UserWarning: Normalizing '4.0.0-rc3' to '4.0.0rc3'
2022-10-04T12:25:46,293     warnings.warn(tmpl.format(**locals()))
2022-10-04T12:25:46,601   running bdist_wheel
2022-10-04T12:25:48,123   running build
2022-10-04T12:25:48,123   running build_py
2022-10-04T12:25:48,809   package init file 'src/molgenis/__init__.py' not found (or not a regular file)
2022-10-04T12:25:48,813   creating build
2022-10-04T12:25:48,814   creating build/lib
2022-10-04T12:25:48,815   creating build/lib/molgenis
2022-10-04T12:25:48,816   creating build/lib/molgenis/capice
2022-10-04T12:25:48,818   copying src/molgenis/capice/main_explain.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,823   copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,826   copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,829   copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,832   copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,835   copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice
2022-10-04T12:25:48,841   creating build/lib/molgenis/capice/cli
2022-10-04T12:25:48,843   copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli
2022-10-04T12:25:48,847   copying src/molgenis/capice/cli/args_handler_explain.py -> build/lib/molgenis/capice/cli
2022-10-04T12:25:48,850   copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli
2022-10-04T12:25:48,852   copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli
2022-10-04T12:25:48,856   copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli
2022-10-04T12:25:48,862   creating build/lib/molgenis/capice/vep
2022-10-04T12:25:48,864   copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,868   copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,871   copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,875   copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,878   copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,881   copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,883   copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,887   copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,890   copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,893   copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,897   copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,900   copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,903   copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,907   copying src/molgenis/capice/vep/seq.py -> build/lib/molgenis/capice/vep
2022-10-04T12:25:48,913   creating build/lib/molgenis/capice/validators
2022-10-04T12:25:48,915   copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,918   copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,922   copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,925   copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,928   copying src/molgenis/capice/validators/model_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,931   copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,935   copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators
2022-10-04T12:25:48,940   creating build/lib/molgenis/capice/core
2022-10-04T12:25:48,942   copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core
2022-10-04T12:25:48,945   copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core
2022-10-04T12:25:48,949   copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core
2022-10-04T12:25:48,952   copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core
2022-10-04T12:25:48,956   copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core
2022-10-04T12:25:48,961   creating build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,962   copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,966   copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,971   copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,974   copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,978   copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,981   copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,984   copying src/molgenis/capice/utilities/column_utils.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,988   copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,991   copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,994   copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:48,997   copying src/molgenis/capice/utilities/preprocessor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:49,002   copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities
2022-10-04T12:25:49,697   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-10-04T12:25:49,698     warnings.warn(
2022-10-04T12:25:50,422   installing to build/bdist.linux-armv7l/wheel
2022-10-04T12:25:50,423   running install
2022-10-04T12:25:50,486   running install_lib
2022-10-04T12:25:51,170   creating build/bdist.linux-armv7l
2022-10-04T12:25:51,171   creating build/bdist.linux-armv7l/wheel
2022-10-04T12:25:51,174   creating build/bdist.linux-armv7l/wheel/molgenis
2022-10-04T12:25:51,177   creating build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,180   copying build/lib/molgenis/capice/main_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,186   creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,188   copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,193   copying build/lib/molgenis/capice/cli/args_handler_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,197   copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,201   copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,205   copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli
2022-10-04T12:25:51,209   copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,215   creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,217   copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,221   copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,225   copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,230   copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,234   copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,238   copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,241   copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,245   copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,249   copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,253   copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,257   copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,261   copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,265   copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,269   copying build/lib/molgenis/capice/vep/seq.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep
2022-10-04T12:25:51,274   creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,276   copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,281   copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,285   copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,289   copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,293   copying build/lib/molgenis/capice/validators/model_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,296   copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,301   copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators
2022-10-04T12:25:51,305   copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,310   creating build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,312   copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,317   copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,321   copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,326   copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,330   copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core
2022-10-04T12:25:51,334   copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,339   creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,341   copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,346   copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,350   copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,355   copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,359   copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,364   copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,368   copying build/lib/molgenis/capice/utilities/column_utils.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,372   copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,376   copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,380   copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,384   copying build/lib/molgenis/capice/utilities/preprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,390   copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities
2022-10-04T12:25:51,394   copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,398   copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice
2022-10-04T12:25:51,402   running install_egg_info
2022-10-04T12:25:52,807   running egg_info
2022-10-04T12:25:53,491   writing src/capice.egg-info/PKG-INFO
2022-10-04T12:25:54,044   writing dependency_links to src/capice.egg-info/dependency_links.txt
2022-10-04T12:25:55,711   writing entry points to src/capice.egg-info/entry_points.txt
2022-10-04T12:25:56,820   writing requirements to src/capice.egg-info/requires.txt
2022-10-04T12:25:57,370   writing top-level names to src/capice.egg-info/top_level.txt
2022-10-04T12:25:57,516   reading manifest file 'src/capice.egg-info/SOURCES.txt'
2022-10-04T12:25:57,522   adding license file 'LICENSE'
2022-10-04T12:25:57,532   writing manifest file 'src/capice.egg-info/SOURCES.txt'
2022-10-04T12:25:57,535   Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-4.0.0rc3-py3.9.egg-info
2022-10-04T12:25:57,560   running install_scripts
2022-10-04T12:25:57,742   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-10-04T12:25:57,751   creating build/bdist.linux-armv7l/wheel/capice-4.0.0rc3.dist-info/WHEEL
2022-10-04T12:25:57,756   creating '/tmp/pip-wheel-q4v5bl6m/capice-4.0.0rc3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-10-04T12:25:57,764   adding 'molgenis/capice/__init__.py'
2022-10-04T12:25:57,767   adding 'molgenis/capice/capice.py'
2022-10-04T12:25:57,770   adding 'molgenis/capice/main_capice.py'
2022-10-04T12:25:57,772   adding 'molgenis/capice/main_explain.py'
2022-10-04T12:25:57,775   adding 'molgenis/capice/main_predict.py'
2022-10-04T12:25:57,779   adding 'molgenis/capice/main_train.py'
2022-10-04T12:25:57,782   adding 'molgenis/capice/cli/__init__.py'
2022-10-04T12:25:57,784   adding 'molgenis/capice/cli/args_handler_explain.py'
2022-10-04T12:25:57,787   adding 'molgenis/capice/cli/args_handler_parent.py'
2022-10-04T12:25:57,790   adding 'molgenis/capice/cli/args_handler_predict.py'
2022-10-04T12:25:57,793   adding 'molgenis/capice/cli/args_handler_train.py'
2022-10-04T12:25:57,796   adding 'molgenis/capice/core/__init__.py'
2022-10-04T12:25:57,799   adding 'molgenis/capice/core/args_handler.py'
2022-10-04T12:25:57,802   adding 'molgenis/capice/core/capice_exporter.py'
2022-10-04T12:25:57,804   adding 'molgenis/capice/core/capice_manager.py'
2022-10-04T12:25:57,807   adding 'molgenis/capice/core/logger.py'
2022-10-04T12:25:57,811   adding 'molgenis/capice/utilities/__init__.py'
2022-10-04T12:25:57,813   adding 'molgenis/capice/utilities/class_suggestor.py'
2022-10-04T12:25:57,816   adding 'molgenis/capice/utilities/column_utils.py'
2022-10-04T12:25:57,818   adding 'molgenis/capice/utilities/custom_logging_filter.py'
2022-10-04T12:25:57,821   adding 'molgenis/capice/utilities/dynamic_loader.py'
2022-10-04T12:25:57,824   adding 'molgenis/capice/utilities/enums.py'
2022-10-04T12:25:57,826   adding 'molgenis/capice/utilities/input_parser.py'
2022-10-04T12:25:57,829   adding 'molgenis/capice/utilities/input_processor.py'
2022-10-04T12:25:57,831   adding 'molgenis/capice/utilities/load_file_postprocessor.py'
2022-10-04T12:25:57,834   adding 'molgenis/capice/utilities/manual_vep_processor.py'
2022-10-04T12:25:57,836   adding 'molgenis/capice/utilities/predictor.py'
2022-10-04T12:25:57,839   adding 'molgenis/capice/utilities/preprocessor.py'
2022-10-04T12:25:57,843   adding 'molgenis/capice/validators/__init__.py'
2022-10-04T12:25:57,845   adding 'molgenis/capice/validators/input_validator.py'
2022-10-04T12:25:57,847   adding 'molgenis/capice/validators/model_validator.py'
2022-10-04T12:25:57,850   adding 'molgenis/capice/validators/post_file_parse_validator.py'
2022-10-04T12:25:57,852   adding 'molgenis/capice/validators/post_vep_processing_validator.py'
2022-10-04T12:25:57,855   adding 'molgenis/capice/validators/property_type_validator.py'
2022-10-04T12:25:57,857   adding 'molgenis/capice/validators/version_validator.py'
2022-10-04T12:25:57,861   adding 'molgenis/capice/vep/__init__.py'
2022-10-04T12:25:57,863   adding 'molgenis/capice/vep/amino_acids.py'
2022-10-04T12:25:57,866   adding 'molgenis/capice/vep/cdna_position.py'
2022-10-04T12:25:57,868   adding 'molgenis/capice/vep/cds_position.py'
2022-10-04T12:25:57,870   adding 'molgenis/capice/vep/consequence.py'
2022-10-04T12:25:57,873   adding 'molgenis/capice/vep/length.py'
2022-10-04T12:25:57,875   adding 'molgenis/capice/vep/poly_phen.py'
2022-10-04T12:25:57,877   adding 'molgenis/capice/vep/protein_position.py'
2022-10-04T12:25:57,880   adding 'molgenis/capice/vep/seq.py'
2022-10-04T12:25:57,882   adding 'molgenis/capice/vep/sift.py'
2022-10-04T12:25:57,884   adding 'molgenis/capice/vep/template.py'
2022-10-04T12:25:57,887   adding 'molgenis/capice/vep/template_position.py'
2022-10-04T12:25:57,889   adding 'molgenis/capice/vep/template_sift_polyphen.py'
2022-10-04T12:25:57,892   adding 'molgenis/capice/vep/type.py'
2022-10-04T12:25:57,896   adding 'capice-4.0.0rc3.dist-info/LICENSE'
2022-10-04T12:25:57,902   adding 'capice-4.0.0rc3.dist-info/METADATA'
2022-10-04T12:25:57,905   adding 'capice-4.0.0rc3.dist-info/WHEEL'
2022-10-04T12:25:57,906   adding 'capice-4.0.0rc3.dist-info/entry_points.txt'
2022-10-04T12:25:57,908   adding 'capice-4.0.0rc3.dist-info/top_level.txt'
2022-10-04T12:25:57,911   adding 'capice-4.0.0rc3.dist-info/RECORD'
2022-10-04T12:25:57,916   removing build/bdist.linux-armv7l/wheel
2022-10-04T12:25:58,204   Building wheel for capice (setup.py): finished with status 'done'
2022-10-04T12:25:58,213   Created wheel for capice: filename=capice-4.0.0rc3-py3-none-any.whl size=52210 sha256=65ae05d21fe56f15b779ccd358ade7c4d0485aa382fdf139afeddb23204df0aa
2022-10-04T12:25:58,215   Stored in directory: /tmp/pip-ephem-wheel-cache-irj37c5x/wheels/da/bb/2f/fcca54ee4ac1f4efe4975439b8d3c99b7870e58280184ae83e
2022-10-04T12:25:58,260 Successfully built capice
2022-10-04T12:25:58,271 Removed build tracker: '/tmp/pip-build-tracker-8lik02qa'