2022-10-07T08:31:03,321 Created temporary directory: /tmp/pip-ephem-wheel-cache-ryh7stnc 2022-10-07T08:31:03,327 Created temporary directory: /tmp/pip-build-tracker-6marknsj 2022-10-07T08:31:03,327 Initialized build tracking at /tmp/pip-build-tracker-6marknsj 2022-10-07T08:31:03,328 Created build tracker: /tmp/pip-build-tracker-6marknsj 2022-10-07T08:31:03,328 Entered build tracker: /tmp/pip-build-tracker-6marknsj 2022-10-07T08:31:03,329 Created temporary directory: /tmp/pip-wheel-_3gja33n 2022-10-07T08:31:03,396 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-07T08:31:03,405 2 location(s) to search for versions of capice: 2022-10-07T08:31:03,405 * https://pypi.org/simple/capice/ 2022-10-07T08:31:03,405 * https://www.piwheels.org/simple/capice/ 2022-10-07T08:31:03,406 Fetching project page and analyzing links: https://pypi.org/simple/capice/ 2022-10-07T08:31:03,407 Getting page https://pypi.org/simple/capice/ 2022-10-07T08:31:03,410 Found index url https://pypi.org/simple 2022-10-07T08:31:03,612 Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz#sha256=580f1298bafd091d86b5ded841588032f72e40035de04a7ec5fc1516c9edc2b2 (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0 2022-10-07T08:31:03,614 Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz#sha256=b5eb8501028078b58b078728cb5927d30f736dec35d8d17784807fb18bece558 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1 2022-10-07T08:31:03,615 Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz#sha256=fd1c7a04ef0b10576b9843cecc7a188c20ae39edb4ed4a8fec27c8abc13d23f4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2 2022-10-07T08:31:03,617 Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz#sha256=331d26cc87603dd46c81b0d670c6c27566c204ef5f68a150de9dced4d4d46018 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3 2022-10-07T08:31:03,618 Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz#sha256=367c328ad9259ebe6610ea4e335d073cad41187bef8d7461ee2c936f9f66de26 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4 2022-10-07T08:31:03,619 Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz#sha256=a50e36cca3b5152d62d295cd04dc7d30cd4f1ef9d8fa57e22e248fc525b1c3eb (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0 2022-10-07T08:31:03,621 Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz#sha256=dea305de80545a7a0dbf2beac54412500af956d0d02d214fc50dd31dd4af8e95 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0 2022-10-07T08:31:03,622 Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz#sha256=0790bb06d06ebfd6b8314ed31fbb06c31caac1a85a51d4c837efdc060886df4f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1 2022-10-07T08:31:03,623 Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz#sha256=244c612dd6058df96b21011a5460e69ef9b887dedf64fa7526cd65538c3c39a9 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2 2022-10-07T08:31:03,625 Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz#sha256=23bafed2b9bf8b449d4cc33c058b06d50665be06bfeb856f5c59713e20a515b4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0 2022-10-07T08:31:03,626 Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz#sha256=691c7cd66ea6422e02e31dbee55706a525849aebe43994ac4a0cb05ae94bda3c (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1 2022-10-07T08:31:03,628 Found link https://files.pythonhosted.org/packages/8e/ec/a0d20fce261cadb53b7674ce6d83f21587812c3d7ed4552c2876e32401b2/capice-3.3.0.tar.gz#sha256=8f4987e84311eafa4e58e7e529bb11fa2b4f0b323b2688642c755d41e87254a4 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.3.0 2022-10-07T08:31:03,629 Found link https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz#sha256=09e87c5726605ccd97cc08f6421166905330954214e992d61b2e91f6b7b15634 (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc1 2022-10-07T08:31:03,630 Found link https://files.pythonhosted.org/packages/c8/d4/0b8b9a2459e3bf9ac9ee9fbbfcef0cf633423cd1164d247ef5b35e6bcc1d/capice-4.0.0rc2.tar.gz#sha256=f32081a09582111b1e4f6103819e003122a05ccb0a1872d9035d06bfd0edee9f (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc2 2022-10-07T08:31:03,632 Found link https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz#sha256=d4f5f3d12d40201f8029a1e49e97c0fb2cd42fbb3ed9a9ac5e2981e8175fdb7e (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc3 2022-10-07T08:31:03,633 Found link https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz#sha256=ffef81ceb74ba07739b84a3d8f55c70721f9c0d01119aeae55d718c9d253bafa (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0 2022-10-07T08:31:03,634 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/ 2022-10-07T08:31:03,635 Getting page https://www.piwheels.org/simple/capice/ 2022-10-07T08:31:03,637 Found index url https://www.piwheels.org/simple 2022-10-07T08:31:03,856 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc3-py3-none-any.whl#sha256=65ae05d21fe56f15b779ccd358ade7c4d0485aa382fdf139afeddb23204df0aa (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,857 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc2-py3-none-any.whl#sha256=9edddaa9ec8bdd22de63608d73b375f392d24b4b24a3140e339b90f4526b336f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,858 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc1-py3-none-any.whl#sha256=2ffdc4d32ff14ea03e7417e65ac6f49c3fb84ebc8a2b0e904801a4762469b21c (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,858 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.3.0-py3-none-any.whl#sha256=b9a9a3cdfdb1ab474a6183c643babd3470fa84e8c5e3b2c8099a9ffee1c41956 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,859 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.1-py3-none-any.whl#sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,859 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,860 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,860 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,861 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,861 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,862 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,862 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,863 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2022-10-07T08:31:03,863 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7) 2022-10-07T08:31:03,864 Skipping link: not a file: https://www.piwheels.org/simple/capice/ 2022-10-07T08:31:03,864 Skipping link: not a file: https://pypi.org/simple/capice/ 2022-10-07T08:31:03,913 Given no hashes to check 1 links for project 'capice': discarding no candidates 2022-10-07T08:31:03,955 Collecting capice==4.0.0 2022-10-07T08:31:03,960 Created temporary directory: /tmp/pip-unpack-vbv3r9bp 2022-10-07T08:31:04,612 Downloading capice-4.0.0.tar.gz (35 kB) 2022-10-07T08:31:04,883 Added capice==4.0.0 from https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz#sha256=ffef81ceb74ba07739b84a3d8f55c70721f9c0d01119aeae55d718c9d253bafa to build tracker '/tmp/pip-build-tracker-6marknsj' 2022-10-07T08:31:04,886 Running setup.py (path:/tmp/pip-wheel-_3gja33n/capice_73f56746d0f74a30b49b53b2625dbdf7/setup.py) egg_info for package capice 2022-10-07T08:31:04,887 Created temporary directory: /tmp/pip-pip-egg-info-abrhik6z 2022-10-07T08:31:04,888 Preparing metadata (setup.py): started 2022-10-07T08:31:04,890 Running command python setup.py egg_info 2022-10-07T08:31:12,813 running egg_info 2022-10-07T08:31:12,819 creating /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info 2022-10-07T08:31:13,462 writing /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/PKG-INFO 2022-10-07T08:31:14,034 writing dependency_links to /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/dependency_links.txt 2022-10-07T08:31:15,722 writing entry points to /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/entry_points.txt 2022-10-07T08:31:16,852 writing requirements to /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/requires.txt 2022-10-07T08:31:17,420 writing top-level names to /tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/top_level.txt 2022-10-07T08:31:17,423 writing manifest file '/tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/SOURCES.txt' 2022-10-07T08:31:18,164 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-10-07T08:31:18,275 reading manifest file '/tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/SOURCES.txt' 2022-10-07T08:31:18,278 adding license file 'LICENSE' 2022-10-07T08:31:18,286 writing manifest file '/tmp/pip-pip-egg-info-abrhik6z/capice.egg-info/SOURCES.txt' 2022-10-07T08:31:18,496 Preparing metadata (setup.py): finished with status 'done' 2022-10-07T08:31:18,510 Source in /tmp/pip-wheel-_3gja33n/capice_73f56746d0f74a30b49b53b2625dbdf7 has version 4.0.0, which satisfies requirement capice==4.0.0 from https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz#sha256=ffef81ceb74ba07739b84a3d8f55c70721f9c0d01119aeae55d718c9d253bafa 2022-10-07T08:31:18,512 Removed capice==4.0.0 from https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz#sha256=ffef81ceb74ba07739b84a3d8f55c70721f9c0d01119aeae55d718c9d253bafa from build tracker '/tmp/pip-build-tracker-6marknsj' 2022-10-07T08:31:18,527 Created temporary directory: /tmp/pip-unpack-s5qywozr 2022-10-07T08:31:18,528 Building wheels for collected packages: capice 2022-10-07T08:31:18,543 Created temporary directory: /tmp/pip-wheel-29v6hpdi 2022-10-07T08:31:18,544 Building wheel for capice (setup.py): started 2022-10-07T08:31:18,546 Destination directory: /tmp/pip-wheel-29v6hpdi 2022-10-07T08:31:18,546 Running command python setup.py bdist_wheel 2022-10-07T08:31:26,079 running bdist_wheel 2022-10-07T08:31:27,521 running build 2022-10-07T08:31:27,522 running build_py 2022-10-07T08:31:28,182 package init file 'src/molgenis/__init__.py' not found (or not a regular file) 2022-10-07T08:31:28,186 creating build 2022-10-07T08:31:28,187 creating build/lib 2022-10-07T08:31:28,188 creating build/lib/molgenis 2022-10-07T08:31:28,189 creating build/lib/molgenis/capice 2022-10-07T08:31:28,192 copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,196 copying src/molgenis/capice/main_explain.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,200 copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,205 copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,209 copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,213 copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice 2022-10-07T08:31:28,219 creating build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,221 copying src/molgenis/capice/utilities/preprocessor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,226 copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,230 copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,235 copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,239 copying src/molgenis/capice/utilities/column_utils.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,243 copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,247 copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,251 copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,256 copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,259 copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,262 copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,266 copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities 2022-10-07T08:31:28,271 creating build/lib/molgenis/capice/core 2022-10-07T08:31:28,273 copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core 2022-10-07T08:31:28,277 copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core 2022-10-07T08:31:28,280 copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core 2022-10-07T08:31:28,284 copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core 2022-10-07T08:31:28,287 copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core 2022-10-07T08:31:28,292 creating build/lib/molgenis/capice/cli 2022-10-07T08:31:28,294 copying src/molgenis/capice/cli/args_handler_explain.py -> build/lib/molgenis/capice/cli 2022-10-07T08:31:28,298 copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli 2022-10-07T08:31:28,302 copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli 2022-10-07T08:31:28,307 copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli 2022-10-07T08:31:28,310 copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli 2022-10-07T08:31:28,316 creating build/lib/molgenis/capice/vep 2022-10-07T08:31:28,318 copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,322 copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,326 copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,329 copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,333 copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,337 copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,340 copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,344 copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,347 copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,351 copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,353 copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,357 copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,361 copying src/molgenis/capice/vep/seq.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,364 copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep 2022-10-07T08:31:28,370 creating build/lib/molgenis/capice/validators 2022-10-07T08:31:28,371 copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,375 copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,379 copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,382 copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,386 copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,389 copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:28,392 copying src/molgenis/capice/validators/model_validator.py -> build/lib/molgenis/capice/validators 2022-10-07T08:31:29,127 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-10-07T08:31:29,127 warnings.warn( 2022-10-07T08:31:29,806 installing to build/bdist.linux-armv7l/wheel 2022-10-07T08:31:29,806 running install 2022-10-07T08:31:29,867 running install_lib 2022-10-07T08:31:30,535 creating build/bdist.linux-armv7l 2022-10-07T08:31:30,536 creating build/bdist.linux-armv7l/wheel 2022-10-07T08:31:30,539 creating build/bdist.linux-armv7l/wheel/molgenis 2022-10-07T08:31:30,543 creating build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,545 copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,549 copying build/lib/molgenis/capice/main_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,554 copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,560 creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,561 copying build/lib/molgenis/capice/utilities/preprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,566 copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,569 copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,572 copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,576 copying build/lib/molgenis/capice/utilities/column_utils.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,579 copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,583 copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,587 copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,591 copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,595 copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,598 copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,602 copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2022-10-07T08:31:30,606 creating build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,608 copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,611 copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,615 copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,619 copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,622 copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2022-10-07T08:31:30,627 creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,628 copying build/lib/molgenis/capice/cli/args_handler_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,632 copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,636 copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,640 copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,644 copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2022-10-07T08:31:30,647 copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,650 copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,654 creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,656 copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,659 copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,662 copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,666 copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,669 copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,672 copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,676 copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,679 copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,682 copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,686 copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,688 copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,692 copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,695 copying build/lib/molgenis/capice/vep/seq.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,698 copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2022-10-07T08:31:30,702 copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2022-10-07T08:31:30,706 creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,708 copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,711 copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,714 copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,718 copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,721 copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,724 copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,726 copying build/lib/molgenis/capice/validators/model_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2022-10-07T08:31:30,729 running install_egg_info 2022-10-07T08:31:32,089 running egg_info 2022-10-07T08:31:32,741 writing src/capice.egg-info/PKG-INFO 2022-10-07T08:31:33,327 writing dependency_links to src/capice.egg-info/dependency_links.txt 2022-10-07T08:31:35,035 writing entry points to src/capice.egg-info/entry_points.txt 2022-10-07T08:31:36,178 writing requirements to src/capice.egg-info/requires.txt 2022-10-07T08:31:36,751 writing top-level names to src/capice.egg-info/top_level.txt 2022-10-07T08:31:36,853 reading manifest file 'src/capice.egg-info/SOURCES.txt' 2022-10-07T08:31:36,860 adding license file 'LICENSE' 2022-10-07T08:31:36,870 writing manifest file 'src/capice.egg-info/SOURCES.txt' 2022-10-07T08:31:36,873 Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-4.0.0-py3.9.egg-info 2022-10-07T08:31:36,897 running install_scripts 2022-10-07T08:31:37,080 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-10-07T08:31:37,089 creating build/bdist.linux-armv7l/wheel/capice-4.0.0.dist-info/WHEEL 2022-10-07T08:31:37,093 creating '/tmp/pip-wheel-29v6hpdi/capice-4.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-10-07T08:31:37,101 adding 'molgenis/capice/__init__.py' 2022-10-07T08:31:37,103 adding 'molgenis/capice/capice.py' 2022-10-07T08:31:37,106 adding 'molgenis/capice/main_capice.py' 2022-10-07T08:31:37,109 adding 'molgenis/capice/main_explain.py' 2022-10-07T08:31:37,111 adding 'molgenis/capice/main_predict.py' 2022-10-07T08:31:37,115 adding 'molgenis/capice/main_train.py' 2022-10-07T08:31:37,118 adding 'molgenis/capice/cli/__init__.py' 2022-10-07T08:31:37,121 adding 'molgenis/capice/cli/args_handler_explain.py' 2022-10-07T08:31:37,123 adding 'molgenis/capice/cli/args_handler_parent.py' 2022-10-07T08:31:37,126 adding 'molgenis/capice/cli/args_handler_predict.py' 2022-10-07T08:31:37,129 adding 'molgenis/capice/cli/args_handler_train.py' 2022-10-07T08:31:37,132 adding 'molgenis/capice/core/__init__.py' 2022-10-07T08:31:37,135 adding 'molgenis/capice/core/args_handler.py' 2022-10-07T08:31:37,137 adding 'molgenis/capice/core/capice_exporter.py' 2022-10-07T08:31:37,140 adding 'molgenis/capice/core/capice_manager.py' 2022-10-07T08:31:37,143 adding 'molgenis/capice/core/logger.py' 2022-10-07T08:31:37,147 adding 'molgenis/capice/utilities/__init__.py' 2022-10-07T08:31:37,149 adding 'molgenis/capice/utilities/class_suggestor.py' 2022-10-07T08:31:37,151 adding 'molgenis/capice/utilities/column_utils.py' 2022-10-07T08:31:37,153 adding 'molgenis/capice/utilities/custom_logging_filter.py' 2022-10-07T08:31:37,156 adding 'molgenis/capice/utilities/dynamic_loader.py' 2022-10-07T08:31:37,159 adding 'molgenis/capice/utilities/enums.py' 2022-10-07T08:31:37,161 adding 'molgenis/capice/utilities/input_parser.py' 2022-10-07T08:31:37,164 adding 'molgenis/capice/utilities/input_processor.py' 2022-10-07T08:31:37,166 adding 'molgenis/capice/utilities/load_file_postprocessor.py' 2022-10-07T08:31:37,169 adding 'molgenis/capice/utilities/manual_vep_processor.py' 2022-10-07T08:31:37,171 adding 'molgenis/capice/utilities/predictor.py' 2022-10-07T08:31:37,175 adding 'molgenis/capice/utilities/preprocessor.py' 2022-10-07T08:31:37,178 adding 'molgenis/capice/validators/__init__.py' 2022-10-07T08:31:37,180 adding 'molgenis/capice/validators/input_validator.py' 2022-10-07T08:31:37,182 adding 'molgenis/capice/validators/model_validator.py' 2022-10-07T08:31:37,185 adding 'molgenis/capice/validators/post_file_parse_validator.py' 2022-10-07T08:31:37,187 adding 'molgenis/capice/validators/post_vep_processing_validator.py' 2022-10-07T08:31:37,189 adding 'molgenis/capice/validators/property_type_validator.py' 2022-10-07T08:31:37,192 adding 'molgenis/capice/validators/version_validator.py' 2022-10-07T08:31:37,195 adding 'molgenis/capice/vep/__init__.py' 2022-10-07T08:31:37,197 adding 'molgenis/capice/vep/amino_acids.py' 2022-10-07T08:31:37,199 adding 'molgenis/capice/vep/cdna_position.py' 2022-10-07T08:31:37,201 adding 'molgenis/capice/vep/cds_position.py' 2022-10-07T08:31:37,203 adding 'molgenis/capice/vep/consequence.py' 2022-10-07T08:31:37,206 adding 'molgenis/capice/vep/length.py' 2022-10-07T08:31:37,208 adding 'molgenis/capice/vep/poly_phen.py' 2022-10-07T08:31:37,210 adding 'molgenis/capice/vep/protein_position.py' 2022-10-07T08:31:37,212 adding 'molgenis/capice/vep/seq.py' 2022-10-07T08:31:37,215 adding 'molgenis/capice/vep/sift.py' 2022-10-07T08:31:37,217 adding 'molgenis/capice/vep/template.py' 2022-10-07T08:31:37,219 adding 'molgenis/capice/vep/template_position.py' 2022-10-07T08:31:37,221 adding 'molgenis/capice/vep/template_sift_polyphen.py' 2022-10-07T08:31:37,224 adding 'molgenis/capice/vep/type.py' 2022-10-07T08:31:37,227 adding 'capice-4.0.0.dist-info/LICENSE' 2022-10-07T08:31:37,233 adding 'capice-4.0.0.dist-info/METADATA' 2022-10-07T08:31:37,235 adding 'capice-4.0.0.dist-info/WHEEL' 2022-10-07T08:31:37,237 adding 'capice-4.0.0.dist-info/entry_points.txt' 2022-10-07T08:31:37,238 adding 'capice-4.0.0.dist-info/top_level.txt' 2022-10-07T08:31:37,241 adding 'capice-4.0.0.dist-info/RECORD' 2022-10-07T08:31:37,246 removing build/bdist.linux-armv7l/wheel 2022-10-07T08:31:37,536 Building wheel for capice (setup.py): finished with status 'done' 2022-10-07T08:31:37,544 Created wheel for capice: filename=capice-4.0.0-py3-none-any.whl size=52322 sha256=ce4003f7b2d92c69f5096e472af55dff5d10864006ef1fbef028b5ab884bd7d4 2022-10-07T08:31:37,546 Stored in directory: /tmp/pip-ephem-wheel-cache-ryh7stnc/wheels/8a/3c/ea/c8d6bdf31c83fea1acbd4ad45d192b79cdc286c1d4bca71184 2022-10-07T08:31:37,578 Successfully built capice 2022-10-07T08:31:37,589 Removed build tracker: '/tmp/pip-build-tracker-6marknsj'