2022-10-11T01:57:57,295 Created temporary directory: /tmp/pip-ephem-wheel-cache-moiabszw 2022-10-11T01:57:57,300 Created temporary directory: /tmp/pip-build-tracker-28go2lvr 2022-10-11T01:57:57,301 Initialized build tracking at /tmp/pip-build-tracker-28go2lvr 2022-10-11T01:57:57,301 Created build tracker: /tmp/pip-build-tracker-28go2lvr 2022-10-11T01:57:57,302 Entered build tracker: /tmp/pip-build-tracker-28go2lvr 2022-10-11T01:57:57,303 Created temporary directory: /tmp/pip-wheel-t_kak85c 2022-10-11T01:57:57,366 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-11T01:57:57,375 2 location(s) to search for versions of ageas: 2022-10-11T01:57:57,375 * https://pypi.org/simple/ageas/ 2022-10-11T01:57:57,375 * https://www.piwheels.org/simple/ageas/ 2022-10-11T01:57:57,376 Fetching project page and analyzing links: https://pypi.org/simple/ageas/ 2022-10-11T01:57:57,377 Getting page https://pypi.org/simple/ageas/ 2022-10-11T01:57:57,381 Found index url https://pypi.org/simple 2022-10-11T01:57:57,629 Fetched page https://pypi.org/simple/ageas/ as application/vnd.pypi.simple.v1+json 2022-10-11T01:57:57,634 Skipping link: No binaries permitted for ageas: https://files.pythonhosted.org/packages/6e/f5/256da210d1e70fbf2192947fef0ee55c9f51a5af0004497f03596c6bbcf6/Ageas-0.0.1a1-py3-none-any.whl (from https://pypi.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,635 Found link https://files.pythonhosted.org/packages/89/ca/14fd97bab46ee9a29fc0fac7ea91286d17b057b6543a6efe5a988085c10a/Ageas-0.0.1a1.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a1 2022-10-11T01:57:57,637 Found link https://files.pythonhosted.org/packages/53/fc/d35b794eda301968d4f352fd96c10a28b927ddbed44134dca1b604f5b098/Ageas-0.0.1a4.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a4 2022-10-11T01:57:57,639 Found link https://files.pythonhosted.org/packages/7a/86/d729399f835922d92b03d198d57943f8ee0eb51d10f08bd09bad2487568c/Ageas-0.0.1a5.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a5 2022-10-11T01:57:57,640 Found link https://files.pythonhosted.org/packages/46/2e/3c11c9ab5c9fa5d90f27e62549b99485280420d39877ec166e2676ab1b15/Ageas-0.0.1a6.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a6 2022-10-11T01:57:57,641 Found link https://files.pythonhosted.org/packages/c5/9e/95d4c734a252a763b52c9a9a771ee161389faeca345ce7036137e8075064/Ageas-0.0.1a7.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a7 2022-10-11T01:57:57,643 Found link https://files.pythonhosted.org/packages/e2/d1/3f4b06f05df0a5319ce66eb2862bff3db1fa40e33172369065360bf5ec3e/Ageas-0.0.1a8.tar.gz (from https://pypi.org/simple/ageas/) (requires-python:>=3.6), version: 0.0.1a8 2022-10-11T01:57:57,644 Fetching project page and analyzing links: https://www.piwheels.org/simple/ageas/ 2022-10-11T01:57:57,644 Getting page https://www.piwheels.org/simple/ageas/ 2022-10-11T01:57:57,647 Found index url https://www.piwheels.org/simple 2022-10-11T01:57:57,949 Fetched page https://www.piwheels.org/simple/ageas/ as text/html 2022-10-11T01:57:57,955 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a7-py3-none-any.whl#sha256=89efed3080d6fe390ad4e23d941da6fa5f93453928675eec7905799de337e089 (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,955 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a6-py3-none-any.whl#sha256=e28c85675e8bb970b379422a668a19b2d138afa4982d32673048a05958f2568f (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,956 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a5-py3-none-any.whl#sha256=c8a957cd6fd463cd7515a84c2dd2c6be9a98ce7b6a000763a9020ece9a85b496 (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,956 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a4-py3-none-any.whl#sha256=9457e4c291c39bd761de5014b7172b80d3410749d11eae1ce1c8c121975ab6ed (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,957 Skipping link: No binaries permitted for ageas: https://www.piwheels.org/simple/ageas/Ageas-0.0.1a1-py3-none-any.whl#sha256=08a355eb6e77efb9f0d5b880a97292ca812f35c8b13af48794c523546d7c8a61 (from https://www.piwheels.org/simple/ageas/) (requires-python:>=3.6) 2022-10-11T01:57:57,958 Skipping link: not a file: https://www.piwheels.org/simple/ageas/ 2022-10-11T01:57:57,958 Skipping link: not a file: https://pypi.org/simple/ageas/ 2022-10-11T01:57:57,993 Given no hashes to check 1 links for project 'ageas': discarding no candidates 2022-10-11T01:57:58,023 Collecting ageas==0.0.1a8 2022-10-11T01:57:58,028 Created temporary directory: /tmp/pip-unpack-ebi8olcb 2022-10-11T01:58:00,356 Downloading Ageas-0.0.1a8.tar.gz (50.3 MB) 2022-10-11T01:58:13,356 Added ageas==0.0.1a8 from https://files.pythonhosted.org/packages/e2/d1/3f4b06f05df0a5319ce66eb2862bff3db1fa40e33172369065360bf5ec3e/Ageas-0.0.1a8.tar.gz to build tracker '/tmp/pip-build-tracker-28go2lvr' 2022-10-11T01:58:13,359 Running setup.py (path:/tmp/pip-wheel-t_kak85c/ageas_d16af7866ef7403393c9688657ef89c8/setup.py) egg_info for package ageas 2022-10-11T01:58:13,361 Created temporary directory: /tmp/pip-pip-egg-info-5gwbiu0p 2022-10-11T01:58:13,361 Preparing metadata (setup.py): started 2022-10-11T01:58:13,363 Running command python setup.py egg_info 2022-10-11T01:58:16,095 running egg_info 2022-10-11T01:58:16,100 creating /tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info 2022-10-11T01:58:16,178 writing /tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/PKG-INFO 2022-10-11T01:58:16,182 writing dependency_links to /tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/dependency_links.txt 2022-10-11T01:58:16,186 writing requirements to /tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/requires.txt 2022-10-11T01:58:16,188 writing top-level names to /tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/top_level.txt 2022-10-11T01:58:16,191 writing manifest file '/tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/SOURCES.txt' 2022-10-11T01:58:16,442 reading manifest file '/tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/SOURCES.txt' 2022-10-11T01:58:16,445 reading manifest template 'MANIFEST.in' 2022-10-11T01:58:16,447 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:530: UserWarning: Normalizing 'v0.0.1-alpha8' to '0.0.1a8' 2022-10-11T01:58:16,448 warnings.warn(tmpl.format(**locals())) 2022-10-11T01:58:16,448 warning: no files found matching 'CODE_OF_CONDUCT.md' 2022-10-11T01:58:16,460 adding license file 'LICENSE' 2022-10-11T01:58:16,471 writing manifest file '/tmp/pip-pip-egg-info-5gwbiu0p/Ageas.egg-info/SOURCES.txt' 2022-10-11T01:58:16,676 Preparing metadata (setup.py): finished with status 'done' 2022-10-11T01:58:16,689 Source in /tmp/pip-wheel-t_kak85c/ageas_d16af7866ef7403393c9688657ef89c8 has version 0.0.1a8, which satisfies requirement ageas==0.0.1a8 from https://files.pythonhosted.org/packages/e2/d1/3f4b06f05df0a5319ce66eb2862bff3db1fa40e33172369065360bf5ec3e/Ageas-0.0.1a8.tar.gz 2022-10-11T01:58:16,691 Removed ageas==0.0.1a8 from https://files.pythonhosted.org/packages/e2/d1/3f4b06f05df0a5319ce66eb2862bff3db1fa40e33172369065360bf5ec3e/Ageas-0.0.1a8.tar.gz from build tracker '/tmp/pip-build-tracker-28go2lvr' 2022-10-11T01:58:16,707 Created temporary directory: /tmp/pip-unpack-94lk03ov 2022-10-11T01:58:16,708 Building wheels for collected packages: ageas 2022-10-11T01:58:16,718 Created temporary directory: /tmp/pip-wheel-6y6qlywe 2022-10-11T01:58:16,718 Building wheel for ageas (setup.py): started 2022-10-11T01:58:16,720 Destination directory: /tmp/pip-wheel-6y6qlywe 2022-10-11T01:58:16,721 Running command python setup.py bdist_wheel 2022-10-11T01:58:19,254 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:530: UserWarning: Normalizing 'v0.0.1-alpha8' to '0.0.1a8' 2022-10-11T01:58:19,255 warnings.warn(tmpl.format(**locals())) 2022-10-11T01:58:19,452 running bdist_wheel 2022-10-11T01:58:19,675 running build 2022-10-11T01:58:19,676 running build_py 2022-10-11T01:58:19,756 creating build 2022-10-11T01:58:19,757 creating build/lib 2022-10-11T01:58:19,758 creating build/lib/ageas 2022-10-11T01:58:19,760 copying ageas/_psgrn.py -> build/lib/ageas 2022-10-11T01:58:19,765 copying ageas/_visualizer.py -> build/lib/ageas 2022-10-11T01:58:19,771 copying ageas/__init__.py -> build/lib/ageas 2022-10-11T01:58:19,774 copying ageas/_main.py -> build/lib/ageas 2022-10-11T01:58:19,778 copying ageas/_unit.py -> build/lib/ageas 2022-10-11T01:58:19,785 creating build/lib/ageas/classifier 2022-10-11T01:58:19,786 copying ageas/classifier/transformer.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,791 copying ageas/classifier/gnb.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,794 copying ageas/classifier/__init__.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,798 copying ageas/classifier/xgb.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,801 copying ageas/classifier/cnn_hybrid.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,804 copying ageas/classifier/lstm.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,808 copying ageas/classifier/svm.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,811 copying ageas/classifier/cnn_1d.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,815 copying ageas/classifier/gru.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,818 copying ageas/classifier/rnn.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,821 copying ageas/classifier/rfc.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,824 copying ageas/classifier/logit.py -> build/lib/ageas/classifier 2022-10-11T01:58:19,829 creating build/lib/ageas/lib 2022-10-11T01:58:19,831 copying ageas/lib/__init__.py -> build/lib/ageas/lib 2022-10-11T01:58:19,834 copying ageas/lib/clf_interpreter.py -> build/lib/ageas/lib 2022-10-11T01:58:19,839 copying ageas/lib/atlas_extractor.py -> build/lib/ageas/lib 2022-10-11T01:58:19,843 copying ageas/lib/clf_trainer.py -> build/lib/ageas/lib 2022-10-11T01:58:19,847 copying ageas/lib/config_maker.py -> build/lib/ageas/lib 2022-10-11T01:58:19,852 copying ageas/lib/meta_grn_caster.py -> build/lib/ageas/lib 2022-10-11T01:58:19,857 copying ageas/lib/deg_finder.py -> build/lib/ageas/lib 2022-10-11T01:58:19,860 copying ageas/lib/normalizer.py -> build/lib/ageas/lib 2022-10-11T01:58:19,863 copying ageas/lib/grp_predictor.py -> build/lib/ageas/lib 2022-10-11T01:58:19,869 creating build/lib/ageas/database_setup 2022-10-11T01:58:19,871 copying ageas/database_setup/binary_class.py -> build/lib/ageas/database_setup 2022-10-11T01:58:19,875 copying ageas/database_setup/__init__.py -> build/lib/ageas/database_setup 2022-10-11T01:58:19,880 creating build/lib/ageas/tool 2022-10-11T01:58:19,882 copying ageas/tool/mex.py -> build/lib/ageas/tool 2022-10-11T01:58:19,886 copying ageas/tool/atac_peaks.py -> build/lib/ageas/tool 2022-10-11T01:58:19,889 copying ageas/tool/__init__.py -> build/lib/ageas/tool 2022-10-11T01:58:19,893 copying ageas/tool/gem.py -> build/lib/ageas/tool 2022-10-11T01:58:19,896 copying ageas/tool/transfac.py -> build/lib/ageas/tool 2022-10-11T01:58:19,899 copying ageas/tool/grn.py -> build/lib/ageas/tool 2022-10-11T01:58:19,904 copying ageas/tool/gtrd.py -> build/lib/ageas/tool 2022-10-11T01:58:19,907 copying ageas/tool/biogrid.py -> build/lib/ageas/tool 2022-10-11T01:58:19,911 copying ageas/tool/json.py -> build/lib/ageas/tool 2022-10-11T01:58:19,914 copying ageas/tool/uniprot_id_map.py -> build/lib/ageas/tool 2022-10-11T01:58:19,918 creating build/lib/ageas/opt 2022-10-11T01:58:19,919 copying ageas/opt/__init__.py -> build/lib/ageas/opt 2022-10-11T01:58:19,924 creating build/lib/ageas/test 2022-10-11T01:58:19,925 copying ageas/test/__init__.py -> build/lib/ageas/test 2022-10-11T01:58:19,929 copying ageas/test/get_gene_symbols.py -> build/lib/ageas/test 2022-10-11T01:58:19,931 running egg_info 2022-10-11T01:58:20,102 writing Ageas.egg-info/PKG-INFO 2022-10-11T01:58:20,106 writing dependency_links to Ageas.egg-info/dependency_links.txt 2022-10-11T01:58:20,110 writing requirements to Ageas.egg-info/requires.txt 2022-10-11T01:58:20,112 writing top-level names to Ageas.egg-info/top_level.txt 2022-10-11T01:58:20,212 reading manifest file 'Ageas.egg-info/SOURCES.txt' 2022-10-11T01:58:20,220 reading manifest template 'MANIFEST.in' 2022-10-11T01:58:20,222 warning: no files found matching 'CODE_OF_CONDUCT.md' 2022-10-11T01:58:20,235 adding license file 'LICENSE' 2022-10-11T01:58:20,247 writing manifest file 'Ageas.egg-info/SOURCES.txt' 2022-10-11T01:58:20,253 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ageas.data.config' as data is deprecated, please list it in `packages`. 2022-10-11T01:58:20,253 !! 2022-10-11T01:58:20,254 ############################ 2022-10-11T01:58:20,255 # Package would be ignored # 2022-10-11T01:58:20,255 ############################ 2022-10-11T01:58:20,255 Python recognizes 'ageas.data.config' as an importable package, 2022-10-11T01:58:20,256 but it is not listed in the `packages` configuration of setuptools. 2022-10-11T01:58:20,256 'ageas.data.config' has been automatically added to the distribution only 2022-10-11T01:58:20,256 because it may contain data files, but this behavior is likely to change 2022-10-11T01:58:20,257 in future versions of setuptools (and therefore is considered deprecated). 2022-10-11T01:58:20,257 Please make sure that 'ageas.data.config' is included as a package by using 2022-10-11T01:58:20,258 the `packages` configuration field or the proper discovery methods 2022-10-11T01:58:20,258 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-10-11T01:58:20,258 instead of `find_packages(...)`/`find:`). 2022-10-11T01:58:20,259 You can read more about "package discovery" and "data files" on setuptools 2022-10-11T01:58:20,259 documentation page. 2022-10-11T01:58:20,261 !! 2022-10-11T01:58:20,261 check.warn(importable) 2022-10-11T01:58:20,262 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ageas.data.human' as data is deprecated, please list it in `packages`. 2022-10-11T01:58:20,262 !! 2022-10-11T01:58:20,263 ############################ 2022-10-11T01:58:20,263 # Package would be ignored # 2022-10-11T01:58:20,263 ############################ 2022-10-11T01:58:20,264 Python recognizes 'ageas.data.human' as an importable package, 2022-10-11T01:58:20,264 but it is not listed in the `packages` configuration of setuptools. 2022-10-11T01:58:20,265 'ageas.data.human' has been automatically added to the distribution only 2022-10-11T01:58:20,265 because it may contain data files, but this behavior is likely to change 2022-10-11T01:58:20,265 in future versions of setuptools (and therefore is considered deprecated). 2022-10-11T01:58:20,266 Please make sure that 'ageas.data.human' is included as a package by using 2022-10-11T01:58:20,266 the `packages` configuration field or the proper discovery methods 2022-10-11T01:58:20,266 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-10-11T01:58:20,267 instead of `find_packages(...)`/`find:`). 2022-10-11T01:58:20,267 You can read more about "package discovery" and "data files" on setuptools 2022-10-11T01:58:20,268 documentation page. 2022-10-11T01:58:20,268 !! 2022-10-11T01:58:20,269 check.warn(importable) 2022-10-11T01:58:20,269 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ageas.data.mouse' as data is deprecated, please list it in `packages`. 2022-10-11T01:58:20,270 !! 2022-10-11T01:58:20,270 ############################ 2022-10-11T01:58:20,271 # Package would be ignored # 2022-10-11T01:58:20,271 ############################ 2022-10-11T01:58:20,271 Python recognizes 'ageas.data.mouse' as an importable package, 2022-10-11T01:58:20,272 but it is not listed in the `packages` configuration of setuptools. 2022-10-11T01:58:20,272 'ageas.data.mouse' has been automatically added to the distribution only 2022-10-11T01:58:20,273 because it may contain data files, but this behavior is likely to change 2022-10-11T01:58:20,273 in future versions of setuptools (and therefore is considered deprecated). 2022-10-11T01:58:20,274 Please make sure that 'ageas.data.mouse' is included as a package by using 2022-10-11T01:58:20,274 the `packages` configuration field or the proper discovery methods 2022-10-11T01:58:20,275 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-10-11T01:58:20,275 instead of `find_packages(...)`/`find:`). 2022-10-11T01:58:20,276 You can read more about "package discovery" and "data files" on setuptools 2022-10-11T01:58:20,276 documentation page. 2022-10-11T01:58:20,277 !! 2022-10-11T01:58:20,278 check.warn(importable) 2022-10-11T01:58:20,279 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ageas.test.__pycache__' as data is deprecated, please list it in `packages`. 2022-10-11T01:58:20,279 !! 2022-10-11T01:58:20,280 ############################ 2022-10-11T01:58:20,281 # Package would be ignored # 2022-10-11T01:58:20,281 ############################ 2022-10-11T01:58:20,282 Python recognizes 'ageas.test.__pycache__' as an importable package, 2022-10-11T01:58:20,282 but it is not listed in the `packages` configuration of setuptools. 2022-10-11T01:58:20,283 'ageas.test.__pycache__' has been automatically added to the distribution only 2022-10-11T01:58:20,283 because it may contain data files, but this behavior is likely to change 2022-10-11T01:58:20,284 in future versions of setuptools (and therefore is considered deprecated). 2022-10-11T01:58:20,285 Please make sure that 'ageas.test.__pycache__' is included as a package by using 2022-10-11T01:58:20,285 the `packages` configuration field or the proper discovery methods 2022-10-11T01:58:20,285 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-10-11T01:58:20,286 instead of `find_packages(...)`/`find:`). 2022-10-11T01:58:20,287 You can read more about "package discovery" and "data files" on setuptools 2022-10-11T01:58:20,287 documentation page. 2022-10-11T01:58:20,291 !! 2022-10-11T01:58:20,292 check.warn(importable) 2022-10-11T01:58:20,292 creating build/lib/ageas/data 2022-10-11T01:58:20,293 creating build/lib/ageas/data/config 2022-10-11T01:58:20,293 copying ageas/data/config/list_config.js -> build/lib/ageas/data/config 2022-10-11T01:58:20,294 copying ageas/data/config/long_list_config.js -> build/lib/ageas/data/config 2022-10-11T01:58:20,294 copying ageas/data/config/sample_config.js -> build/lib/ageas/data/config 2022-10-11T01:58:20,295 creating build/lib/ageas/data/human 2022-10-11T01:58:20,295 copying ageas/data/human/Tranfac201803_MotifTFsF.txt -> build/lib/ageas/data/human 2022-10-11T01:58:20,314 copying ageas/data/human/bioGRiD.stratified.js.gz -> build/lib/ageas/data/human 2022-10-11T01:58:20,535 copying ageas/data/human/gtrd_promoter-1000.js.gz -> build/lib/ageas/data/human 2022-10-11T01:58:21,522 copying ageas/data/human/uniprot_idmapping.stratified.js.gz -> build/lib/ageas/data/human 2022-10-11T01:58:21,580 creating build/lib/ageas/data/mouse 2022-10-11T01:58:21,582 copying ageas/data/mouse/Tranfac201803_MotifTFsF.txt -> build/lib/ageas/data/mouse 2022-10-11T01:58:21,603 copying ageas/data/mouse/bioGRiD.stratified.js.gz -> build/lib/ageas/data/mouse 2022-10-11T01:58:21,633 copying ageas/data/mouse/gtrd_promoter-1000.js.gz -> build/lib/ageas/data/mouse 2022-10-11T01:58:22,462 copying ageas/data/mouse/uniprot_idmapping.stratified.js.gz -> build/lib/ageas/data/mouse 2022-10-11T01:58:22,509 copying ageas/test/esc.csv.gz -> build/lib/ageas/test 2022-10-11T01:58:22,522 copying ageas/test/ips.csv.gz -> build/lib/ageas/test 2022-10-11T01:58:22,534 copying ageas/test/mef.csv.gz -> build/lib/ageas/test 2022-10-11T01:58:22,547 creating build/lib/ageas/test/__pycache__ 2022-10-11T01:58:22,548 copying ageas/test/__pycache__/__init__.cpython-38.pyc -> build/lib/ageas/test/__pycache__ 2022-10-11T01:58:22,643 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-10-11T01:58:22,643 setuptools.SetuptoolsDeprecationWarning, 2022-10-11T01:58:22,718 installing to build/bdist.linux-armv7l/wheel 2022-10-11T01:58:22,719 running install 2022-10-11T01:58:22,780 running install_lib 2022-10-11T01:58:22,859 creating build/bdist.linux-armv7l 2022-10-11T01:58:22,860 creating build/bdist.linux-armv7l/wheel 2022-10-11T01:58:22,863 creating build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:22,865 copying build/lib/ageas/_psgrn.py -> build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:22,870 copying build/lib/ageas/_visualizer.py -> build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:22,876 creating build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,878 copying build/lib/ageas/classifier/transformer.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,882 copying build/lib/ageas/classifier/gnb.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,886 copying build/lib/ageas/classifier/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,890 copying build/lib/ageas/classifier/xgb.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,894 copying build/lib/ageas/classifier/cnn_hybrid.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,899 copying build/lib/ageas/classifier/lstm.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,902 copying build/lib/ageas/classifier/svm.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,906 copying build/lib/ageas/classifier/cnn_1d.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,910 copying build/lib/ageas/classifier/gru.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,913 copying build/lib/ageas/classifier/rnn.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,917 copying build/lib/ageas/classifier/rfc.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,920 copying build/lib/ageas/classifier/logit.py -> build/bdist.linux-armv7l/wheel/ageas/classifier 2022-10-11T01:58:22,926 creating build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,927 copying build/lib/ageas/lib/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,931 copying build/lib/ageas/lib/clf_interpreter.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,935 copying build/lib/ageas/lib/atlas_extractor.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,939 copying build/lib/ageas/lib/clf_trainer.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,944 copying build/lib/ageas/lib/config_maker.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,948 copying build/lib/ageas/lib/meta_grn_caster.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,953 copying build/lib/ageas/lib/deg_finder.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,956 copying build/lib/ageas/lib/normalizer.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,960 copying build/lib/ageas/lib/grp_predictor.py -> build/bdist.linux-armv7l/wheel/ageas/lib 2022-10-11T01:58:22,964 copying build/lib/ageas/__init__.py -> build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:22,969 creating build/bdist.linux-armv7l/wheel/ageas/database_setup 2022-10-11T01:58:22,970 copying build/lib/ageas/database_setup/binary_class.py -> build/bdist.linux-armv7l/wheel/ageas/database_setup 2022-10-11T01:58:22,975 copying build/lib/ageas/database_setup/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/database_setup 2022-10-11T01:58:22,979 copying build/lib/ageas/_main.py -> build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:22,984 creating build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:22,986 copying build/lib/ageas/tool/mex.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:22,990 copying build/lib/ageas/tool/atac_peaks.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:22,993 copying build/lib/ageas/tool/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:22,997 copying build/lib/ageas/tool/gem.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,001 copying build/lib/ageas/tool/transfac.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,005 copying build/lib/ageas/tool/grn.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,010 copying build/lib/ageas/tool/gtrd.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,014 copying build/lib/ageas/tool/biogrid.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,018 copying build/lib/ageas/tool/json.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,022 copying build/lib/ageas/tool/uniprot_id_map.py -> build/bdist.linux-armv7l/wheel/ageas/tool 2022-10-11T01:58:23,027 creating build/bdist.linux-armv7l/wheel/ageas/opt 2022-10-11T01:58:23,029 copying build/lib/ageas/opt/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/opt 2022-10-11T01:58:23,034 creating build/bdist.linux-armv7l/wheel/ageas/data 2022-10-11T01:58:23,037 creating build/bdist.linux-armv7l/wheel/ageas/data/human 2022-10-11T01:58:23,039 copying build/lib/ageas/data/human/gtrd_promoter-1000.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/human 2022-10-11T01:58:24,140 copying build/lib/ageas/data/human/bioGRiD.stratified.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/human 2022-10-11T01:58:24,357 copying build/lib/ageas/data/human/Tranfac201803_MotifTFsF.txt -> build/bdist.linux-armv7l/wheel/ageas/data/human 2022-10-11T01:58:24,376 copying build/lib/ageas/data/human/uniprot_idmapping.stratified.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/human 2022-10-11T01:58:24,448 creating build/bdist.linux-armv7l/wheel/ageas/data/config 2022-10-11T01:58:24,449 copying build/lib/ageas/data/config/list_config.js -> build/bdist.linux-armv7l/wheel/ageas/data/config 2022-10-11T01:58:24,453 copying build/lib/ageas/data/config/sample_config.js -> build/bdist.linux-armv7l/wheel/ageas/data/config 2022-10-11T01:58:24,459 copying build/lib/ageas/data/config/long_list_config.js -> build/bdist.linux-armv7l/wheel/ageas/data/config 2022-10-11T01:58:24,463 creating build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-10-11T01:58:24,465 copying build/lib/ageas/data/mouse/gtrd_promoter-1000.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-10-11T01:58:25,280 copying build/lib/ageas/data/mouse/bioGRiD.stratified.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-10-11T01:58:25,316 copying build/lib/ageas/data/mouse/Tranfac201803_MotifTFsF.txt -> build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-10-11T01:58:25,336 copying build/lib/ageas/data/mouse/uniprot_idmapping.stratified.js.gz -> build/bdist.linux-armv7l/wheel/ageas/data/mouse 2022-10-11T01:58:25,383 copying build/lib/ageas/_unit.py -> build/bdist.linux-armv7l/wheel/ageas 2022-10-11T01:58:25,388 creating build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,390 copying build/lib/ageas/test/mef.csv.gz -> build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,403 copying build/lib/ageas/test/__init__.py -> build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,407 creating build/bdist.linux-armv7l/wheel/ageas/test/__pycache__ 2022-10-11T01:58:25,409 copying build/lib/ageas/test/__pycache__/__init__.cpython-38.pyc -> build/bdist.linux-armv7l/wheel/ageas/test/__pycache__ 2022-10-11T01:58:25,412 copying build/lib/ageas/test/esc.csv.gz -> build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,425 copying build/lib/ageas/test/ips.csv.gz -> build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,439 copying build/lib/ageas/test/get_gene_symbols.py -> build/bdist.linux-armv7l/wheel/ageas/test 2022-10-11T01:58:25,442 running install_egg_info 2022-10-11T01:58:25,529 Copying Ageas.egg-info to build/bdist.linux-armv7l/wheel/Ageas-0.0.1a8-py3.7.egg-info 2022-10-11T01:58:25,550 running install_scripts 2022-10-11T01:58:25,720 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-10-11T01:58:25,730 creating build/bdist.linux-armv7l/wheel/Ageas-0.0.1a8.dist-info/WHEEL 2022-10-11T01:58:25,735 creating '/tmp/pip-wheel-6y6qlywe/Ageas-0.0.1a8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-10-11T01:58:25,742 adding 'ageas/__init__.py' 2022-10-11T01:58:25,747 adding 'ageas/_main.py' 2022-10-11T01:58:25,752 adding 'ageas/_psgrn.py' 2022-10-11T01:58:25,757 adding 'ageas/_unit.py' 2022-10-11T01:58:25,762 adding 'ageas/_visualizer.py' 2022-10-11T01:58:25,767 adding 'ageas/classifier/__init__.py' 2022-10-11T01:58:25,770 adding 'ageas/classifier/cnn_1d.py' 2022-10-11T01:58:25,773 adding 'ageas/classifier/cnn_hybrid.py' 2022-10-11T01:58:25,776 adding 'ageas/classifier/gnb.py' 2022-10-11T01:58:25,778 adding 'ageas/classifier/gru.py' 2022-10-11T01:58:25,781 adding 'ageas/classifier/logit.py' 2022-10-11T01:58:25,783 adding 'ageas/classifier/lstm.py' 2022-10-11T01:58:25,786 adding 'ageas/classifier/rfc.py' 2022-10-11T01:58:25,788 adding 'ageas/classifier/rnn.py' 2022-10-11T01:58:25,791 adding 'ageas/classifier/svm.py' 2022-10-11T01:58:25,794 adding 'ageas/classifier/transformer.py' 2022-10-11T01:58:25,797 adding 'ageas/classifier/xgb.py' 2022-10-11T01:58:25,802 adding 'ageas/data/config/list_config.js' 2022-10-11T01:58:25,804 adding 'ageas/data/config/long_list_config.js' 2022-10-11T01:58:25,810 adding 'ageas/data/config/sample_config.js' 2022-10-11T01:58:25,922 adding 'ageas/data/human/Tranfac201803_MotifTFsF.txt' 2022-10-11T01:58:27,130 adding 'ageas/data/human/bioGRiD.stratified.js.gz' 2022-10-11T01:58:34,369 adding 'ageas/data/human/gtrd_promoter-1000.js.gz' 2022-10-11T01:58:35,224 adding 'ageas/data/human/uniprot_idmapping.stratified.js.gz' 2022-10-11T01:58:35,337 adding 'ageas/data/mouse/Tranfac201803_MotifTFsF.txt' 2022-10-11T01:58:35,501 adding 'ageas/data/mouse/bioGRiD.stratified.js.gz' 2022-10-11T01:58:40,030 adding 'ageas/data/mouse/gtrd_promoter-1000.js.gz' 2022-10-11T01:58:40,594 adding 'ageas/data/mouse/uniprot_idmapping.stratified.js.gz' 2022-10-11T01:58:40,615 adding 'ageas/database_setup/__init__.py' 2022-10-11T01:58:40,619 adding 'ageas/database_setup/binary_class.py' 2022-10-11T01:58:40,623 adding 'ageas/lib/__init__.py' 2022-10-11T01:58:40,627 adding 'ageas/lib/atlas_extractor.py' 2022-10-11T01:58:40,630 adding 'ageas/lib/clf_interpreter.py' 2022-10-11T01:58:40,634 adding 'ageas/lib/clf_trainer.py' 2022-10-11T01:58:40,638 adding 'ageas/lib/config_maker.py' 2022-10-11T01:58:40,640 adding 'ageas/lib/deg_finder.py' 2022-10-11T01:58:40,643 adding 'ageas/lib/grp_predictor.py' 2022-10-11T01:58:40,647 adding 'ageas/lib/meta_grn_caster.py' 2022-10-11T01:58:40,650 adding 'ageas/lib/normalizer.py' 2022-10-11T01:58:40,653 adding 'ageas/opt/__init__.py' 2022-10-11T01:58:40,656 adding 'ageas/test/__init__.py' 2022-10-11T01:58:40,704 adding 'ageas/test/esc.csv.gz' 2022-10-11T01:58:40,710 adding 'ageas/test/get_gene_symbols.py' 2022-10-11T01:58:40,753 adding 'ageas/test/ips.csv.gz' 2022-10-11T01:58:40,806 adding 'ageas/test/mef.csv.gz' 2022-10-11T01:58:40,813 adding 'ageas/test/__pycache__/__init__.cpython-38.pyc' 2022-10-11T01:58:40,817 adding 'ageas/tool/__init__.py' 2022-10-11T01:58:40,820 adding 'ageas/tool/atac_peaks.py' 2022-10-11T01:58:40,822 adding 'ageas/tool/biogrid.py' 2022-10-11T01:58:40,825 adding 'ageas/tool/gem.py' 2022-10-11T01:58:40,829 adding 'ageas/tool/grn.py' 2022-10-11T01:58:40,832 adding 'ageas/tool/gtrd.py' 2022-10-11T01:58:40,834 adding 'ageas/tool/json.py' 2022-10-11T01:58:40,837 adding 'ageas/tool/mex.py' 2022-10-11T01:58:40,840 adding 'ageas/tool/transfac.py' 2022-10-11T01:58:40,842 adding 'ageas/tool/uniprot_id_map.py' 2022-10-11T01:58:40,856 adding 'Ageas-0.0.1a8.dist-info/LICENSE' 2022-10-11T01:58:40,859 adding 'Ageas-0.0.1a8.dist-info/METADATA' 2022-10-11T01:58:40,861 adding 'Ageas-0.0.1a8.dist-info/WHEEL' 2022-10-11T01:58:40,862 adding 'Ageas-0.0.1a8.dist-info/top_level.txt' 2022-10-11T01:58:40,864 adding 'Ageas-0.0.1a8.dist-info/RECORD' 2022-10-11T01:58:42,217 removing build/bdist.linux-armv7l/wheel 2022-10-11T01:58:42,525 Building wheel for ageas (setup.py): finished with status 'done' 2022-10-11T01:58:44,034 Created wheel for ageas: filename=Ageas-0.0.1a8-py3-none-any.whl size=50282079 sha256=4964c50af48f5dd0432529e3012dd4d0f239cd26c6935358a712666ebe595d96 2022-10-11T01:58:44,037 Stored in directory: /tmp/pip-ephem-wheel-cache-moiabszw/wheels/75/48/80/adcfabf6c221da253297461c63facf4ba4e693b499b14dc124 2022-10-11T01:58:44,128 Successfully built ageas 2022-10-11T01:58:47,739 Removed build tracker: '/tmp/pip-build-tracker-28go2lvr'