2022-10-17T14:08:02,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-_s8sioua
2022-10-17T14:08:02,985 Created temporary directory: /tmp/pip-build-tracker-uzijwn1f
2022-10-17T14:08:02,986 Initialized build tracking at /tmp/pip-build-tracker-uzijwn1f
2022-10-17T14:08:02,986 Created build tracker: /tmp/pip-build-tracker-uzijwn1f
2022-10-17T14:08:02,986 Entered build tracker: /tmp/pip-build-tracker-uzijwn1f
2022-10-17T14:08:02,987 Created temporary directory: /tmp/pip-wheel-znbvurrr
2022-10-17T14:08:03,019 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-17T14:08:03,023 2 location(s) to search for versions of pytrimal:
2022-10-17T14:08:03,023 * https://pypi.org/simple/pytrimal/
2022-10-17T14:08:03,023 * https://www.piwheels.org/simple/pytrimal/
2022-10-17T14:08:03,023 Fetching project page and analyzing links: https://pypi.org/simple/pytrimal/
2022-10-17T14:08:03,024 Getting page https://pypi.org/simple/pytrimal/
2022-10-17T14:08:03,025 Found index url https://pypi.org/simple
2022-10-17T14:08:03,257 Fetched page https://pypi.org/simple/pytrimal/ as application/vnd.pypi.simple.v1+json
2022-10-17T14:08:03,309   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e7/92/deb27aec34cc7863b866ea29900d2e47e17511e771fd93e4a9f73ad6b8ac/pytrimal-0.1.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,310   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ec/60/4797839372e3883bb134efc65c098c3c6c4d96d8022e41400a1a8a90bb0b/pytrimal-0.1.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,310   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4b/f5/1d7233b1405054090c3b53605b27bad7119dd1c6238bdc174bb4b10b5df2/pytrimal-0.1.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,310   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/48/2f/69945d01f3d8af3f9a8442c7d5a0fa19f7c81361d568bc856bf502c8ae9a/pytrimal-0.1.0-cp35-cp35m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,310   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a9/c2/ccddd18f9a1918b79b346e0d856a2f08971ce68e25d780a9446e3a53860b/pytrimal-0.1.0-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,311   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/6b/cd4cd3b14e9b5644113e3e51cc15a839b3068231cec06441de8f99632b3a/pytrimal-0.1.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,311   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/56/0f/65a63a8cbd8e7ee8e80afec55bda84b4e236841224f9a7221595c00a1dba/pytrimal-0.1.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,311   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/0a/38/92fb02233538de1e77eb533350ed7d14068ef1a6f031462f11bce08e05df/pytrimal-0.1.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,311   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2e/4d/af840c124e2b391640d8df3045b4cdb2bb0eb4d952fe95acd65a0f9043e7/pytrimal-0.1.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,311   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/75/3d/52511029b5d404a58457debf7d60a8fca6b4fd4322db7d2073d8026119b2/pytrimal-0.1.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,312   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d1/cd/2b631d34ee040ffa60a48b58b0c38e5dc41d5f5251fd27f47a4f16650392/pytrimal-0.1.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,312   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8b/6c/b9e93831941b14de3a41445333d9e09e2389378754527ab0743ff97ab5c7/pytrimal-0.1.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,312   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/94/1c/dab45d42e6fb9f9f2e8a4e76da1722faadf7eba1254c912b07e443398499/pytrimal-0.1.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,312   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d9/f8/113e5e8ffc20f0477eb2c20d59e0e64c6d5dda295af95eb6979bd2efee93/pytrimal-0.1.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,312   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cd/ca/e3bc1316c04c94ba11885b933473ce229863522b438a112c27b2fbfe080e/pytrimal-0.1.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,313   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/7c/15/c057ace451e9ccc70f96639e56461ca403ba2c829af6c6bbf777d36494df/pytrimal-0.1.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,313   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6c/78/0a693856b86c7e419cfebe567e5c8ceafe8339b5600762d8cd8566607de9/pytrimal-0.1.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,313   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2c/e4/b946aca9e551aa0dd6cd90705547b979e4834cb5a63834121f4f911461e3/pytrimal-0.1.0-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,313   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/19/48/1283651eccc18b73c1f0c4af418db4a831d1ef949d9edbdbf8a47f40d2a8/pytrimal-0.1.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,313   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/84/24/1bc90c83278945f66b31974a2aba5bf3e9d4b272d78790120748bf9485f5/pytrimal-0.1.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,314   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b1/6d/7d46cda527909bd41ead416342e24999e8cc63c82560bfaf5918fd708af7/pytrimal-0.1.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,314   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/aa/bae9c9761abe07e00fa0dc292ef343354f2e508e9ce37f72f8754dfb7903/pytrimal-0.1.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,314   Found link https://files.pythonhosted.org/packages/39/09/11aae9fa483929539f100beb384da40724188ff102ee94517b4a3ccba5c8/pytrimal-0.1.0.tar.gz (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.1.0
2022-10-17T14:08:03,315   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cd/95/15ba2a87e8ef78e2362fb9fa9900f0cee75d4938f92d2d889b0e8cd09f71/pytrimal-0.1.1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,315   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/16/99/4b6ddc7537fa853cadf9d9ef81af95019c58003d5119febce6af8bddedcb/pytrimal-0.1.1-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,315   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b5/c3/e1edfbe9450b0c2d23d36fa8e624dc28220d7f23ddaf3e46829c18c1725b/pytrimal-0.1.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,315   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9b/c9/655540ff5e71515c6a37a61e71b5dcc9b3c29515a7ed7601dd40f7e5e8ce/pytrimal-0.1.1-cp35-cp35m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,316   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/1c/85/3880bc8ccfc099b68d8e18baf2aa194127082c0cdf274833c13e83cee1a9/pytrimal-0.1.1-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,316   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/61/43/dc432a69a7f2a59f4e5e509c206f1178d56b401206cc661957179c9ddeae/pytrimal-0.1.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,316   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/12/7a/53b39f4d3b3ae1da433bae3111d667d3d5813bece2a4b19bcc4a21fd11fa/pytrimal-0.1.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,316   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/77/8b/87f775f8f50c6f3b32813d272f7534fa00372db8cdb41ceda4971662368f/pytrimal-0.1.1-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,317   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e5/e5/9bd5e09db10f69b2d749e985a5da7b66e98688f285bddf7f5a666301aff3/pytrimal-0.1.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,317   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/da/35/5ce9cbae068eb2d7fb9c03aa07281308751a38c3d6bdb521c69345fefbda/pytrimal-0.1.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,317   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/74/22/25d73231abb8d9553a4be31493a8034544d1c16ee60204ab408c7406973d/pytrimal-0.1.1-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,317   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/72/34/deec927936c24cad8d5dd6b1d8e503e9087a9e08312ebe4cae88beb217ce/pytrimal-0.1.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,317   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/27/f7/10554d83d0ec45d5500b9e98eaca33706103b94ee91c6f6bf9964b0a380c/pytrimal-0.1.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/41/c7/044460829089c368091d78f9a8b99327e789d33fb1e7bd1803ea66b3113b/pytrimal-0.1.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6f/9e/05203b6f71b87fb6ecd15c3e9c574abe49252c23207bffd33946e11dff82/pytrimal-0.1.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/bb/db/7c0fa4d3e5d996d2c9714a53e4391aba90f5fc2d532e43dce4af051da656/pytrimal-0.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/71/c2/de54862ac53e4644da95cc5d45c9e5dac1d461692ee5db20d380429b29df/pytrimal-0.1.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f3/9f/268de33e758c07ddaca562b49fc69e05e2754bcfebd1ebd981e259eeff6f/pytrimal-0.1.1-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,318   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/36/58/d74103e669267602491f2ed32f9d2579844fa18da914f0397bf096daa911/pytrimal-0.1.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,319   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9c/63/539c1d358fe0952f7df82e2bb7bec9810385121673cc93859955b2c5aed1/pytrimal-0.1.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,319   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ae/ca/58bd8a813592f678c7d550bf0ddcc625922a2f891b4c53b2062c71aaa1a1/pytrimal-0.1.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,319   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c4/8b/f4066f88bce2590fbad7a52d52588c23a7410a07e5b278925ecf5b0bf934/pytrimal-0.1.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,320   Found link https://files.pythonhosted.org/packages/86/c4/83edee2cc512ab4e6f48160b4f7e737681a8b0cabf4df5798ed32656e062/pytrimal-0.1.1.tar.gz (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.1.1
2022-10-17T14:08:03,320   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/24/1b/3c52d892348ffe2df0778d09e3650dc5f6e524d01333a1842067f14af62d/pytrimal-0.1.2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,320   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6d/3e/26e2fc28d6f07c55b6279ec9785098ba866ea41a892e542160efdeb1b755/pytrimal-0.1.2-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,320   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c9/f7/fd0b169d7447de46c232e11e04a5b880448effa3e94e15121b5df4369106/pytrimal-0.1.2-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,321   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8a/ed/fc33fc64e959980eb54d0b506d8983b4a92999f5f8ecf21a504fd22b25b3/pytrimal-0.1.2-cp35-cp35m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,321   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d5/fd/b234fd262c716f2c9b201cabc7b26f2ccdb60e34c9695034ddfdda347d00/pytrimal-0.1.2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,321   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b5/e6/a8bc5bea8875b2bb52a443d2467a8048e1ee4f99c8f35f3bd215c26b51b6/pytrimal-0.1.2-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,321   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/91/c9/ba2d80eea0746c3bccd4ab0e1ebcbf520ef759430502e44f7c81fa53c651/pytrimal-0.1.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,321   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/80/55/ac4a531b5f9ab21dca1e4b21fd7a0ec1adf82e8f1062de13585589821bb0/pytrimal-0.1.2-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,322   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/23/59/f4e10f20bbfe8bf34b2e38543ec73e04ea9f56d95142e0724f90616fa427/pytrimal-0.1.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,322   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/5a/16/36f73560aa5d2627ba84d23cbb4b0d6a30c20b5e179ff26bf287ac603721/pytrimal-0.1.2-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,322   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a2/24/9b43cf80a445706c5c08117fa967f740acdd11167fa1dc0f6810e01ec8b4/pytrimal-0.1.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,322   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/fc/e2/a798c77f4b6d8a0f06a3ef92d2f5d05c865c4a7ce91de705b85691f76196/pytrimal-0.1.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,323   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/1e/25/a2bfe3b916c029ab201db9b77ab789e70591cf3f9f8c0fcd95ac78824c7e/pytrimal-0.1.2-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,323   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ca/ca/6a8fb95c6d7d73a36e20283f12c13bb17ad1bfc71e7a58bbd5f546d2a720/pytrimal-0.1.2-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,323   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/8e/00/2f4c24fac8b530c8e66f5ed1b593a38346bd5a6e3d7d1473f7818b98cf1f/pytrimal-0.1.2-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,324   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/83/22/73461217ee23720834993d13a3ddbdd4dc49e1dda18c9a810b0effef1faf/pytrimal-0.1.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,324   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b8/65/d1ae935e5c78469a2a35b07bef9915adfe50d46b5138bd3ee6996e125b95/pytrimal-0.1.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,324   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d6/d0/e6d9db538fce39b6411ee7f1d4ad12e206f161ce0d6c8f7fad68721ed33a/pytrimal-0.1.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,325   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/bf/7b/104aa07074f5806820ca3c2e113601e5a1835c465992cb184ce45afa58a2/pytrimal-0.2.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,325   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/56/57/c4ba8cc35ba9d797b6f084caae9cc85a6194359b195ba8cbd2e87a763eb9/pytrimal-0.2.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,326   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f5/4b/b62d869a5d1957aa4a4e7952d2db0f5cff33ee9fe84e6f10a51ef3cb6e63/pytrimal-0.2.0-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,326   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/2c/52/4a83895a000377cb7c9fa5b0fffad39a69d10937cb454f2145df6d3ce386/pytrimal-0.2.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,326   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/a0/283e91965913e7665d7fd43b976d4d658d38049601bcbb70924a7c5efe69/pytrimal-0.2.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,326   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/4f/11ad2e10ffa2a44e11135131980b4666521c84b67f6d9630523461006d18/pytrimal-0.2.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,327   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/87/84/5eb4953b5e3e91343c4add38cdba0940926bb9066cd704f645aab79c4a8a/pytrimal-0.2.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,327   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6b/3d/6927e855abfcceab79c54af1760d1fdeb36379f96e76671284a0dde8d11e/pytrimal-0.2.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,327   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/29/f8/cac08f56c1c8b48f8caab3ff24bc55e88666b4b95748322e1de6066d386e/pytrimal-0.2.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,327   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4b/ba/df02c20b2298a9fafdc3cfca5cfe4f29e43e6442fd8d6575a593cc3add8c/pytrimal-0.2.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,328   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/a6/a473f9d5f7bb2a019f33a9ba624d6f7991ea0e9d6c0bfc30b3ba0e0899ad/pytrimal-0.2.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,328   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/15/e5/874093542f1d7a14d760c739034e3d22cc259fa77071fb98c95d5a01ab39/pytrimal-0.2.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,328   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ee/87/c2ffbd4e8dee903a30963368be4a235f88bf95b59a2adc2e5526ff52368b/pytrimal-0.2.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,328   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d3/a5/1bb5b37e2ae6fe57e7a5cf42d7639ef7d8b065a5bba77ff34ce4bcc15a46/pytrimal-0.2.0-pp36-pypy36_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,349   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e8/0f/e13dcccfb66ad9bd2c9a5dbad13defa59c088b6c9d7aa8d47a97155451a7/pytrimal-0.4.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,349   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/27/86/4a0c1ac74f76469fda62a7d59918baacd916e5cf02d1951fc81ec443c40e/pytrimal-0.4.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,349   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cb/00/8940d8ffe1a83e7c00244cefe485847f5e9d765bff76c1623def7e000463/pytrimal-0.4.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,359   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b2/8f/7e05b5c8ec3b73fec3a416a1290ca309ffc6d1a70ff8cf2a5aa2dcc54e4a/pytrimal-0.5.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,359   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c6/72/b6c1482688bf5c6dcf6b533ed4b9d09ab3c2d438270be4158a038b812f2b/pytrimal-0.5.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,359   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e6/46/2adaf1ed1c9d302d072e23de32f18cf756dbc762712e4963f03ee57b50fd/pytrimal-0.5.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,359   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/53/a7/7f7c31344d2ff900ae61d01567466b805c4b31fb843e4c739fa0523eafdf/pytrimal-0.5.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,368   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/41/d1/161b0bd07386838cc1898bff97453552f77c74b40696e64c755a3bc6a0d3/pytrimal-0.5.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,368   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a9/b0/eab287490fcc6be9d23d558b28960413297a446f6efd62b4f4fcbfbc0d6f/pytrimal-0.5.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,369   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/75/25/85ceccb5e18afed184c9c691be90ba957ae73dd672af0ae1ab35b4cf8112/pytrimal-0.5.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,369   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/05/32/d151a9bf1e74e3389c319c714f7b82875e142081398402439e74a0cceb57/pytrimal-0.5.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,369   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/13/28/c7925cda83d25b028607fba3efee0b6a2b2ee3d01da0577365a779576562/pytrimal-0.5.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,369   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/59/c3/d5148181890319a59bb26c09b9b446ac3a2c2157958c03e8c817b9dfc141/pytrimal-0.5.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,369   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f9/b8/02e9a7019d0999425a30656d80440239f1f830d533dc0c544ea5647b6cb0/pytrimal-0.5.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,370   Found link https://files.pythonhosted.org/packages/f7/f2/bb822b96f1d3be4e2d2826098b3e4b26e8ffea35e6cc814ead16a7298e8f/pytrimal-0.5.3.tar.gz (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.5.3
2022-10-17T14:08:03,370   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/6a/39/9fb5299eb4a1073aac29a07365ae5f4e81b5db812526e59e1101b75b058a/pytrimal-0.5.4-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,370   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/65/61/e27a3e07fc8d09dfd3b531049eca10d8912760f425d801787436b850de39/pytrimal-0.5.4-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,371   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/dd/c9/d7ea4b9f818ee74df516878040372f772624092f035dbb3eda3d766345ca/pytrimal-0.5.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,371   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/43/b2/8281268442ea284c4cf07901213a6c594654722010951b6308a39ed4fd12/pytrimal-0.5.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,371   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/03/18/b266df6dba5654a061f148f40cf2b6c4c6f41556914942c5957bf8fd9686/pytrimal-0.5.4-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,371   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/7c/3f/543a3f1731eeab9296fd99d873057b02f85d5f4d5976c60b67596fb24e0e/pytrimal-0.5.4-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,371   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/24/36/1ce7effec86565e5a46a6bab875dd41a79bb5750af24a9be5d0db39fa824/pytrimal-0.5.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,372   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/fd/58/ec36d1e13bfc0e30eb98fea79b189de9b4d0c3cc9ffe5ffba0c8e52172ba/pytrimal-0.5.4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,372   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9d/b2/6c3fe3a40552a94801f856e8fa1f87a6efd03880ae9d7a24f4727047283d/pytrimal-0.5.4-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,372   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/4d/4f/6cc77740abe2647531b9fd63368bee1c3de19ba2150601889d0de16f4122/pytrimal-0.5.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,372   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/02/5a/9c114bedeff7f5c851c2130bf1eddfc2819ebcbc7fa1f581b6e5a1533f99/pytrimal-0.5.4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,372   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/28/25/cc850e1942d85d4154b5e8bbe939e7a5750b66936cc8109ab8bc2a22a5d0/pytrimal-0.5.4-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,373   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/14/f9/c13a5130569f0f6c6689bac6bcccc98168fb3e038e902d29537da3c41667/pytrimal-0.5.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,373   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/12/81/53fbe34d4045e7a9dd47271323a02f70ada137aba52bdfaae853c635f407/pytrimal-0.5.4-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,373   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/65/9f/89a9ab43f9b86716887d4a2b0c76e183ea85ff3febdfec82d831908e9112/pytrimal-0.5.4-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,373   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/88/03/e6b18b4de0fff31b5bb59c16b1ccaf16c0ea6e469ff375c615e036275e08/pytrimal-0.5.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,373   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/0d/1f/b8393cb2f061f79dc3c9e729b1abb580e7c3cb78cdfff3fd36b6f90d055a/pytrimal-0.5.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,374   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/cc/0e/fb840c1df44cde1427d6597872016d754f6ac162bccaf6fab5ecf9129fc3/pytrimal-0.5.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,374   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/88/aa/0b0205e37d4a4dafefcd4c0e1e5719dfb72a407555b39f9d9f67d201ef6a/pytrimal-0.5.4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,374   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/19/5d/c0a66d3b37ab7910c2eca8b9ff6f809635fbb974ea7cc206abb80c0faeeb/pytrimal-0.5.4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,374   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/ca/96/1facda383444aeaed6377e9e0ca418df5d640ac105eef64604c3990b14e6/pytrimal-0.5.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,374   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d5/ca/61e2e7274ae598576d5d544e10e9c33147732e403ff4759b3478d585d56e/pytrimal-0.5.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,375   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/f7/6e/38595b7098f81b9d2376b4b03cdefae098ecca77d8cf2c571c342a8a9406/pytrimal-0.5.5-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,375   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/be/98/792cc9196df05ea5894592686109aa77c3049a358a4421e0a2ffb733e656/pytrimal-0.5.5-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,376   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/df/53/7861822b4e4d5cec2788f02932d1620680266762ffad7fc961097d767480/pytrimal-0.5.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,376   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a2/6c/9e8f710057a6c1ada1b8695ea12bbe8bd8ad95d6b3ae96ae29c43a640c5f/pytrimal-0.5.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,376   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9a/21/0e7ad77ed5f289d9e7a3cbad0c022f0626a22013140b355888f223b8ec31/pytrimal-0.5.5-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
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2022-10-17T14:08:03,376   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/d9/d9/c03d80e5846fa2c40fe4ca450a00d7e1ed570e01031c630232cd0655e63a/pytrimal-0.5.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,377   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/06/e4/8e2a4ec7de59e2d5d9a26a29885f75cb9b9302669a083dfccd1b382aae99/pytrimal-0.5.5-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,377   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9a/8c/a2304b13c4a3dcbed5baa72fc0d17b3951488eefce21c4d2e544c4957678/pytrimal-0.5.5-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,377   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/9f/35/b311f938d864abcdb0ccc2f657c7f70732dab513089bacf6c8fb479956b7/pytrimal-0.5.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,377   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/49/a8/b5a17f9e656d077a4ffea8b8a7e4a25afbc168b2afdedaa1f82e861be10d/pytrimal-0.5.5-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,377   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/60/e7/a602dab9551f63383ebb110bc9f10df694871456b8903c04ac532c42e7ad/pytrimal-0.5.5-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,378   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/eb/6e/ee2eb09165c54ce8b3fa1360c5b3ebf9dd33c73a179fa546afe7d74dde79/pytrimal-0.5.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,378   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/b0/99/dcf2808145f1eaa763084d95e3a64258789fc28ee0b5e5a015ddf3673cec/pytrimal-0.5.5-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,378   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/67/ae/d0e76a6d79043e74c0f7ffae80de3f2a5e103498a3865bcf8fa9c293af61/pytrimal-0.5.5-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,378   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/71/fb/f870d6948876801cb20f6703d305a939d617281ef59e3b39aa92d211d2c6/pytrimal-0.5.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,378   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/98/37/2d6987ff83c665d2f5b0b899e1879dfbc7ae730e1332e8703cb3b33c9b96/pytrimal-0.5.5-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,379   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/98/a6/2c611b0014094f7e4b045e8c16e697899e71b9d84bcf3aac4c85015bb871/pytrimal-0.5.5-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,379   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/a7/7d/e85fdaf7cd74edb9e3c2766255f466b527f156a490424e83ba93d37d7e51/pytrimal-0.5.5-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,379   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/c8/8c/b90d880d1f9789a97fdb75739c64ca1b859a88cce5c0feec0a88d9ca1dd6/pytrimal-0.5.5-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,379   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/e3/1c/49517e285b9d4f9ee1f9fcefb869038f7a13f92c76dc90cdbd55ba6cf018/pytrimal-0.5.5-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,379   Skipping link: No binaries permitted for pytrimal: https://files.pythonhosted.org/packages/07/a0/57d6f9d2aa90efee7465d430adb62f7d3736ea33a8de906cc61c66854380/pytrimal-0.5.5-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,380   Found link https://files.pythonhosted.org/packages/18/4a/8e6fb61af4452f30ca706b934e251f7c8655cbdbee7bd85ff140efdcad9e/pytrimal-0.5.5.tar.gz (from https://pypi.org/simple/pytrimal/) (requires-python:>=3.5), version: 0.5.5
2022-10-17T14:08:03,380 Fetching project page and analyzing links: https://www.piwheels.org/simple/pytrimal/
2022-10-17T14:08:03,381 Getting page https://www.piwheels.org/simple/pytrimal/
2022-10-17T14:08:03,382 Found index url https://www.piwheels.org/simple
2022-10-17T14:08:03,618 Fetched page https://www.piwheels.org/simple/pytrimal/ as text/html
2022-10-17T14:08:03,632   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.4-cp39-cp39-linux_armv7l.whl#sha256=f057508a510a8b81ecbba935a0c1b246fab18e3b22b3ca8355229751d1ae812b (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,633   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.4-cp39-cp39-linux_armv6l.whl#sha256=f057508a510a8b81ecbba935a0c1b246fab18e3b22b3ca8355229751d1ae812b (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,633   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.4-cp37-cp37m-linux_armv7l.whl#sha256=3c4a238e9091e4af0f018445e263e367fcd09b80c5f113975345cb8d54621fc0 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,633   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.4-cp37-cp37m-linux_armv6l.whl#sha256=3c4a238e9091e4af0f018445e263e367fcd09b80c5f113975345cb8d54621fc0 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,633   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.3-cp39-cp39-linux_armv7l.whl#sha256=96414c6ad503cbafadc0cd909c065d410ab2460dc7ee7c1c664f2aab64c19323 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,634   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.3-cp39-cp39-linux_armv6l.whl#sha256=96414c6ad503cbafadc0cd909c065d410ab2460dc7ee7c1c664f2aab64c19323 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,634   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=790e0a5ba04a025d1521570bb479bbe5dd3f543fc0279b06d34b8dd8d78a9078 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,634   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.3-cp37-cp37m-linux_armv6l.whl#sha256=790e0a5ba04a025d1521570bb479bbe5dd3f543fc0279b06d34b8dd8d78a9078 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,634   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.2-cp39-cp39-linux_armv7l.whl#sha256=d8c4cbf91f4f60cc31cf104c877312bb091c4cedb0b11340fb15ec9409092560 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,634   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.2-cp39-cp39-linux_armv6l.whl#sha256=d8c4cbf91f4f60cc31cf104c877312bb091c4cedb0b11340fb15ec9409092560 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,635   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.2-cp37-cp37m-linux_armv7l.whl#sha256=4fcc57ac1551e91658c051a7f6a26c64e84e5c799c65c2c660b060a73649bbde (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,635   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.2-cp37-cp37m-linux_armv6l.whl#sha256=4fcc57ac1551e91658c051a7f6a26c64e84e5c799c65c2c660b060a73649bbde (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,635   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.1-cp39-cp39-linux_armv7l.whl#sha256=33634cd2d6a05efa31c4f7a64d98b50745ed67dd434f6f1a26d59d8380c782ed (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,635   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.1-cp39-cp39-linux_armv6l.whl#sha256=33634cd2d6a05efa31c4f7a64d98b50745ed67dd434f6f1a26d59d8380c782ed (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,635   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=7dc30c4514d830c7d50f5da9578ac26dc4c99658610a7a140859c6e95ffe5210 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,636   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=7dc30c4514d830c7d50f5da9578ac26dc4c99658610a7a140859c6e95ffe5210 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,636   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.0-cp39-cp39-linux_armv7l.whl#sha256=72fc3420a99a380479e4ed1919c0fbee2bbd9e00fe33238946ee59869bd9a9ba (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,636   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.0-cp39-cp39-linux_armv6l.whl#sha256=72fc3420a99a380479e4ed1919c0fbee2bbd9e00fe33238946ee59869bd9a9ba (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,636   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=49ce53bfa624c31e9f670a3442d3d4023bcc17f0e86c09dee3e81a901d0ef6b3 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,636   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=49ce53bfa624c31e9f670a3442d3d4023bcc17f0e86c09dee3e81a901d0ef6b3 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,637   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.4.0-cp39-cp39-linux_armv7l.whl#sha256=3cff96406b8ddeea7cbb51046bd603ab3ed9c0bb004cb90d1a665436624b2b56 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,637   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.4.0-cp39-cp39-linux_armv6l.whl#sha256=3cff96406b8ddeea7cbb51046bd603ab3ed9c0bb004cb90d1a665436624b2b56 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,637   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.4.0-cp37-cp37m-linux_armv7l.whl#sha256=7f78e36e834cd71b9c6157802ae3bf5bec7dd411d544fe6b2c01c05143727d59 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,637   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.4.0-cp37-cp37m-linux_armv6l.whl#sha256=7f78e36e834cd71b9c6157802ae3bf5bec7dd411d544fe6b2c01c05143727d59 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,637   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp39-cp39-linux_armv7l.whl#sha256=61a18089e1538bafb91947f7c54942052cdebd640068daae8f6fd8559ee1821c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,638   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp39-cp39-linux_armv6l.whl#sha256=61a18089e1538bafb91947f7c54942052cdebd640068daae8f6fd8559ee1821c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,638   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp37-cp37m-linux_armv7l.whl#sha256=5f3c8d40349fe09f1f02e9392a1bc6dfe598428ccca63cc687102270f4b8bcc7 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,638   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp37-cp37m-linux_armv6l.whl#sha256=5f3c8d40349fe09f1f02e9392a1bc6dfe598428ccca63cc687102270f4b8bcc7 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,638   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp35-cp35m-linux_armv7l.whl#sha256=2c89565387151ab91f065fd81e6801a59cb0a692e1d518a4bdbe1b819d4e3bb9 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,638   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.2-cp35-cp35m-linux_armv6l.whl#sha256=2c89565387151ab91f065fd81e6801a59cb0a692e1d518a4bdbe1b819d4e3bb9 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,639   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=06890ee257c9d009b402620382086847b440e92a339043e6b759dda8545f6ff6 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,639   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=06890ee257c9d009b402620382086847b440e92a339043e6b759dda8545f6ff6 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,639   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp37-cp37m-linux_armv7l.whl#sha256=87c41102be591a5dcb6efdf6807ea38a522ec3cc653f29af275f01d2b4e8d4fc (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,639   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp37-cp37m-linux_armv6l.whl#sha256=87c41102be591a5dcb6efdf6807ea38a522ec3cc653f29af275f01d2b4e8d4fc (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,639   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp35-cp35m-linux_armv7l.whl#sha256=7719393288e4b7d58df66be1b835f01bc962a0a64b61adab766ce32ffa6a3f0e (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,640   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.1-cp35-cp35m-linux_armv6l.whl#sha256=7719393288e4b7d58df66be1b835f01bc962a0a64b61adab766ce32ffa6a3f0e (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,640   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=f5b150f17ead1887b6682721c33fa5cd7a8ab0d03d55d68176e11f3d0e17db43 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,640   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=f5b150f17ead1887b6682721c33fa5cd7a8ab0d03d55d68176e11f3d0e17db43 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,640   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=b22cc6f8f6e39214cc9d6ef2778b8811ddb859aeca9ad030b64d78cc83816438 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,640   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=b22cc6f8f6e39214cc9d6ef2778b8811ddb859aeca9ad030b64d78cc83816438 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,641   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp35-cp35m-linux_armv7l.whl#sha256=c2e192c5e15e398eb8fcf987e378ac23645cf88ae7b43798f959edf36711e847 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,641   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.2.0-cp35-cp35m-linux_armv6l.whl#sha256=c2e192c5e15e398eb8fcf987e378ac23645cf88ae7b43798f959edf36711e847 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,641   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp39-cp39-linux_armv7l.whl#sha256=8335602183caad582c8928ea691b7be0671b701f02fd9489681d90efd6708863 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,641   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp39-cp39-linux_armv6l.whl#sha256=8335602183caad582c8928ea691b7be0671b701f02fd9489681d90efd6708863 (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,641   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp37-cp37m-linux_armv7l.whl#sha256=37809e659b1a6d0ae65708c8315d044d8b3ed5fa169c916d23a800715869074c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,642   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp37-cp37m-linux_armv6l.whl#sha256=37809e659b1a6d0ae65708c8315d044d8b3ed5fa169c916d23a800715869074c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,642   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=4a3dcfa05641310e339af037687c7171ffa116dab65617ebd2d9661d937375ee (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,642   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=4a3dcfa05641310e339af037687c7171ffa116dab65617ebd2d9661d937375ee (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,642   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=c54c9649d97022e8ce47cce412b180621f9a77399bf9c58ef855e08f913a237f (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,642   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=c54c9649d97022e8ce47cce412b180621f9a77399bf9c58ef855e08f913a237f (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,643   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=37299a0c9633838823df1040fad4ea675ea5d693df9331240e4dc04f1797003c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,643   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=37299a0c9633838823df1040fad4ea675ea5d693df9331240e4dc04f1797003c (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,643   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp35-cp35m-linux_armv7l.whl#sha256=ed62deb3aed080a21ff74516c43aecc431d77412aff60dbbc4ba6282beee2b7d (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,643   Skipping link: No binaries permitted for pytrimal: https://www.piwheels.org/simple/pytrimal/pytrimal-0.1.1-cp35-cp35m-linux_armv6l.whl#sha256=ed62deb3aed080a21ff74516c43aecc431d77412aff60dbbc4ba6282beee2b7d (from https://www.piwheels.org/simple/pytrimal/) (requires-python:>=3.5)
2022-10-17T14:08:03,643 Skipping link: not a file: https://www.piwheels.org/simple/pytrimal/
2022-10-17T14:08:03,644 Skipping link: not a file: https://pypi.org/simple/pytrimal/
2022-10-17T14:08:03,664 Given no hashes to check 1 links for project 'pytrimal': discarding no candidates
2022-10-17T14:08:03,680 Collecting pytrimal==0.5.5
2022-10-17T14:08:03,683   Created temporary directory: /tmp/pip-unpack-fy85pfwa
2022-10-17T14:08:03,761   Downloading pytrimal-0.5.5.tar.gz (8.7 MB)
2022-10-17T14:08:07,623   Added pytrimal==0.5.5 from https://files.pythonhosted.org/packages/18/4a/8e6fb61af4452f30ca706b934e251f7c8655cbdbee7bd85ff140efdcad9e/pytrimal-0.5.5.tar.gz to build tracker '/tmp/pip-build-tracker-uzijwn1f'
2022-10-17T14:08:07,627   Created temporary directory: /tmp/pip-build-env-8gt3o_y8
2022-10-17T14:08:07,636   Installing build dependencies: started
2022-10-17T14:08:07,637   Running command pip subprocess to install build dependencies
2022-10-17T14:08:08,864   Using pip 22.2.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-10-17T14:08:09,278   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-17T14:08:11,150   Collecting setuptools>=46.4
2022-10-17T14:08:11,272     Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.5.0-py3-none-any.whl (1.2 MB)
2022-10-17T14:08:12,605   Collecting cython~=0.29.16
2022-10-17T14:08:13,062     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.32-cp39-cp39-linux_armv7l.whl (5.0 MB)
2022-10-17T14:08:14,953   Installing collected packages: setuptools, cython
2022-10-17T14:08:20,319     Creating /tmp/pip-build-env-8gt3o_y8/overlay/bin
2022-10-17T14:08:20,321     changing mode of /tmp/pip-build-env-8gt3o_y8/overlay/bin/cygdb to 755
2022-10-17T14:08:20,323     changing mode of /tmp/pip-build-env-8gt3o_y8/overlay/bin/cython to 755
2022-10-17T14:08:20,326     changing mode of /tmp/pip-build-env-8gt3o_y8/overlay/bin/cythonize to 755
2022-10-17T14:08:20,348   Successfully installed cython-0.29.32 setuptools-65.5.0
2022-10-17T14:08:20,686   Installing build dependencies: finished with status 'done'
2022-10-17T14:08:20,691   Getting requirements to build wheel: started
2022-10-17T14:08:20,692   Running command Getting requirements to build wheel
2022-10-17T14:08:22,013   Getting requirements to build wheel: finished with status 'done'
2022-10-17T14:08:22,030   Installing backend dependencies: started
2022-10-17T14:08:22,031   Running command pip subprocess to install backend dependencies
2022-10-17T14:08:23,226   Using pip 22.2.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-10-17T14:08:23,637   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-17T14:08:24,082   Collecting wheel
2022-10-17T14:08:24,102     Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB)
2022-10-17T14:08:25,519   Installing collected packages: wheel
2022-10-17T14:08:25,665     Creating /tmp/pip-build-env-8gt3o_y8/normal/bin
2022-10-17T14:08:25,667     changing mode of /tmp/pip-build-env-8gt3o_y8/normal/bin/wheel to 755
2022-10-17T14:08:25,681   Successfully installed wheel-0.37.1
2022-10-17T14:08:25,934   Installing backend dependencies: finished with status 'done'
2022-10-17T14:08:25,936   Created temporary directory: /tmp/pip-modern-metadata-cwi8p4a7
2022-10-17T14:08:25,940   Preparing metadata (pyproject.toml): started
2022-10-17T14:08:25,941   Running command Preparing metadata (pyproject.toml)
2022-10-17T14:08:27,145   running dist_info
2022-10-17T14:08:27,168   creating /tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info
2022-10-17T14:08:27,182   writing /tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/PKG-INFO
2022-10-17T14:08:27,186   writing dependency_links to /tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/dependency_links.txt
2022-10-17T14:08:27,189   writing top-level names to /tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/top_level.txt
2022-10-17T14:08:27,190   writing manifest file '/tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/SOURCES.txt'
2022-10-17T14:08:27,251   reading manifest file '/tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/SOURCES.txt'
2022-10-17T14:08:27,255   reading manifest template 'MANIFEST.in'
2022-10-17T14:08:27,872   warning: no previously-included files matching '*.html' found under directory 'pytrimal'
2022-10-17T14:08:27,876   warning: no files found matching '*.pxd' under directory 'pytrimal/patch'
2022-10-17T14:08:27,906   adding license file 'COPYING'
2022-10-17T14:08:27,923   writing manifest file '/tmp/pip-modern-metadata-cwi8p4a7/pytrimal.egg-info/SOURCES.txt'
2022-10-17T14:08:27,925   creating '/tmp/pip-modern-metadata-cwi8p4a7/pytrimal-0.5.5.dist-info'
2022-10-17T14:08:28,014   adding license file "COPYING" (matched pattern "COPYING*")
2022-10-17T14:08:28,160   Preparing metadata (pyproject.toml): finished with status 'done'
2022-10-17T14:08:28,168   Source in /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004 has version 0.5.5, which satisfies requirement pytrimal==0.5.5 from https://files.pythonhosted.org/packages/18/4a/8e6fb61af4452f30ca706b934e251f7c8655cbdbee7bd85ff140efdcad9e/pytrimal-0.5.5.tar.gz
2022-10-17T14:08:28,169   Removed pytrimal==0.5.5 from https://files.pythonhosted.org/packages/18/4a/8e6fb61af4452f30ca706b934e251f7c8655cbdbee7bd85ff140efdcad9e/pytrimal-0.5.5.tar.gz from build tracker '/tmp/pip-build-tracker-uzijwn1f'
2022-10-17T14:08:28,176 Created temporary directory: /tmp/pip-unpack-02c5s1si
2022-10-17T14:08:28,177 Building wheels for collected packages: pytrimal
2022-10-17T14:08:28,182   Created temporary directory: /tmp/pip-wheel-57sbkvfa
2022-10-17T14:08:28,182   Destination directory: /tmp/pip-wheel-57sbkvfa
2022-10-17T14:08:28,185   Building wheel for pytrimal (pyproject.toml): started
2022-10-17T14:08:28,186   Running command Building wheel for pytrimal (pyproject.toml)
2022-10-17T14:08:29,412   running bdist_wheel
2022-10-17T14:08:29,456   running build
2022-10-17T14:08:29,456   running build_py
2022-10-17T14:08:29,472   creating build
2022-10-17T14:08:29,473   creating build/lib.linux-armv7l-cpython-39
2022-10-17T14:08:29,473   creating build/lib.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:08:29,474   copying pytrimal/_version.py -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:08:29,476   copying pytrimal/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:08:29,479   creating build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,479   copying pytrimal/tests/test_representative_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,481   copying pytrimal/tests/__main__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,483   copying pytrimal/tests/test_similarity_matrix.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,485   copying pytrimal/tests/test_automatic_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,487   copying pytrimal/tests/test_alignment.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,489   copying pytrimal/tests/test_overlap_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,491   copying pytrimal/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,493   copying pytrimal/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,494   copying pytrimal/tests/test_manual_trimmer.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,497   creating build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,498   copying pytrimal/tests/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,504   copying pytrimal/py.typed -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:08:29,505   copying pytrimal/_trimal.pyi -> build/lib.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:08:29,508   copying pytrimal/tests/requirements.txt -> build/lib.linux-armv7l-cpython-39/pytrimal/tests
2022-10-17T14:08:29,509   copying pytrimal/tests/data/ENOG411BWBU.strictplus.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,515   copying pytrimal/tests/data/ENOG411BWBU.maxidentity75.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,519   copying pytrimal/tests/data/ENOG411BWBU.id50.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,522   copying pytrimal/tests/data/PF12574.full.afa -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,524   copying pytrimal/tests/data/ENOG411BWBU.strict.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,531   copying pytrimal/tests/data/example.001.gt90.w3.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,533   copying pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,540   copying pytrimal/tests/data/halorhodopsin.afa -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,545   copying pytrimal/tests/data/example.001.AA.clw -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,548   copying pytrimal/tests/data/ENOG411BWBU.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,561   copying pytrimal/tests/data/ENOG411BWBU.seq40.res60.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,569   copying pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,579   copying pytrimal/tests/data/pam70.json -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,581   copying pytrimal/tests/data/ENOG411BWBU.automated1.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,587   copying pytrimal/tests/data/ENOG411BWBU.seq80.res80.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,595   copying pytrimal/tests/data/ENOG411BWBU.clusters5.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,598   copying pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,604   copying pytrimal/tests/data/ENOG411BWBU.noduplicateseqs.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,614   copying pytrimal/tests/data/ENOG411BWBU.gappyout.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,622   copying pytrimal/tests/data/ENOG411BWBU.id70.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,627   copying pytrimal/tests/data/ENOG411BWBU.clusters10.fasta -> build/lib.linux-armv7l-cpython-39/pytrimal/tests/data
2022-10-17T14:08:29,632   running build_clib
2022-10-17T14:08:29,637   creating build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:29,639   generating build/temp.linux-armv7l-cpython-39/libcpu_features.a from vendor/cpu_features/src/impl_arm_linux_or_android.c, vendor/cpu_features/src/filesystem.c, vendor/cpu_features/src/stack_line_reader.c, vendor/cpu_features/src/string_view.c, vendor/cpu_features/src/copy.inl, vendor/cpu_features/src/define_introspection.inl, vendor/cpu_features/src/define_introspection_and_hwcaps.inl, vendor/cpu_features/src/equals.inl, vendor/cpu_features/src/impl_x86__base_implementation.inl
2022-10-17T14:08:29,639   building cpu_features with unix compiler
2022-10-17T14:08:29,641   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_getauxval.c -o build/temp.linux-armv7l-cpython-39/have_getauxval.o
2022-10-17T14:08:29,801   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_getauxval.o -o build/temp.linux-armv7l-cpython-39/have_getauxval
2022-10-17T14:08:29,913   checking whether function 'getauxval' is available... yes
2022-10-17T14:08:29,916   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_dlclose.c -o build/temp.linux-armv7l-cpython-39/have_dlclose.o
2022-10-17T14:08:29,968   build/temp.linux-armv7l-cpython-39/have_dlclose.c: In function ‘main’:
2022-10-17T14:08:29,968   build/temp.linux-armv7l-cpython-39/have_dlclose.c:4:21: warning: null argument where non-null required (argument 1) [-Wnonnull]
2022-10-17T14:08:29,969       4 |                     dlclose(0);
2022-10-17T14:08:29,969         |                     ^~~~~~~
2022-10-17T14:08:30,006   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_dlclose.o -o build/temp.linux-armv7l-cpython-39/have_dlclose
2022-10-17T14:08:30,103   /usr/bin/ld: build/temp.linux-armv7l-cpython-39/have_dlclose.o: in function `main':
2022-10-17T14:08:30,103   /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/build/temp.linux-armv7l-cpython-39/have_dlclose.c:4: undefined reference to `dlclose'
2022-10-17T14:08:30,108   collect2: error: ld returned 1 exit status
2022-10-17T14:08:30,110   checking whether function 'dlclose' is available... no
2022-10-17T14:08:30,112   generating build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c from vendor/cpu_features/src/impl_arm_linux_or_android.c
2022-10-17T14:08:30,113   copying vendor/cpu_features/src/impl_arm_linux_or_android.c -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,116   generating build/temp.linux-armv7l-cpython-39/filesystem.c from vendor/cpu_features/src/filesystem.c
2022-10-17T14:08:30,117   copying vendor/cpu_features/src/filesystem.c -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,119   generating build/temp.linux-armv7l-cpython-39/stack_line_reader.c from vendor/cpu_features/src/stack_line_reader.c
2022-10-17T14:08:30,120   copying vendor/cpu_features/src/stack_line_reader.c -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,122   generating build/temp.linux-armv7l-cpython-39/string_view.c from vendor/cpu_features/src/string_view.c
2022-10-17T14:08:30,123   copying vendor/cpu_features/src/string_view.c -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,125   generating build/temp.linux-armv7l-cpython-39/copy.inl from vendor/cpu_features/src/copy.inl
2022-10-17T14:08:30,126   copying vendor/cpu_features/src/copy.inl -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,128   generating build/temp.linux-armv7l-cpython-39/define_introspection.inl from vendor/cpu_features/src/define_introspection.inl
2022-10-17T14:08:30,129   copying vendor/cpu_features/src/define_introspection.inl -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,131   generating build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl from vendor/cpu_features/src/define_introspection_and_hwcaps.inl
2022-10-17T14:08:30,132   copying vendor/cpu_features/src/define_introspection_and_hwcaps.inl -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,134   generating build/temp.linux-armv7l-cpython-39/equals.inl from vendor/cpu_features/src/equals.inl
2022-10-17T14:08:30,135   copying vendor/cpu_features/src/equals.inl -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,136   generating build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl from vendor/cpu_features/src/impl_x86__base_implementation.inl
2022-10-17T14:08:30,137   copying vendor/cpu_features/src/impl_x86__base_implementation.inl -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,141   generating build/temp.linux-armv7l-cpython-39/hwcaps.c from vendor/cpu_features/src/hwcaps.c
2022-10-17T14:08:30,142   copying vendor/cpu_features/src/hwcaps.c -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:30,156   generating build/temp.linux-armv7l-cpython-39/filesystem.o from build/temp.linux-armv7l-cpython-39/filesystem.c
2022-10-17T14:08:30,157   generating build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o from build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c
2022-10-17T14:08:30,158   generating build/temp.linux-armv7l-cpython-39/string_view.o from build/temp.linux-armv7l-cpython-39/string_view.c
2022-10-17T14:08:30,158   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -DHAVE_STRONG_GETAUXVAL=1 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/filesystem.c -o build/temp.linux-armv7l-cpython-39/filesystem.o
2022-10-17T14:08:30,158   generating build/temp.linux-armv7l-cpython-39/stack_line_reader.o from build/temp.linux-armv7l-cpython-39/stack_line_reader.c
2022-10-17T14:08:30,159   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -DHAVE_STRONG_GETAUXVAL=1 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.c -o build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o
2022-10-17T14:08:30,159   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -DHAVE_STRONG_GETAUXVAL=1 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/stack_line_reader.c -o build/temp.linux-armv7l-cpython-39/stack_line_reader.o
2022-10-17T14:08:30,168   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -DHAVE_STRONG_GETAUXVAL=1 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/string_view.c -o build/temp.linux-armv7l-cpython-39/string_view.o
2022-10-17T14:08:30,390   generating build/temp.linux-armv7l-cpython-39/hwcaps.o from build/temp.linux-armv7l-cpython-39/hwcaps.c
2022-10-17T14:08:30,391   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DSTACK_LINE_READER_BUFFER_SIZE=1024 -DHAVE_STRONG_GETAUXVAL=1 -Ivendor/cpu_features/include -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/hwcaps.c -o build/temp.linux-armv7l-cpython-39/hwcaps.o
2022-10-17T14:08:30,822   generating build/temp.linux-armv7l-cpython-39/libcpu_features.a from build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o, build/temp.linux-armv7l-cpython-39/filesystem.o, build/temp.linux-armv7l-cpython-39/stack_line_reader.o, build/temp.linux-armv7l-cpython-39/string_view.o, build/temp.linux-armv7l-cpython-39/copy.inl, build/temp.linux-armv7l-cpython-39/define_introspection.inl, build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl, build/temp.linux-armv7l-cpython-39/equals.inl, build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl, build/temp.linux-armv7l-cpython-39/hwcaps.o
2022-10-17T14:08:30,824   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libcpu_features.a build/temp.linux-armv7l-cpython-39/impl_arm_linux_or_android.o build/temp.linux-armv7l-cpython-39/filesystem.o build/temp.linux-armv7l-cpython-39/stack_line_reader.o build/temp.linux-armv7l-cpython-39/string_view.o build/temp.linux-armv7l-cpython-39/copy.inl build/temp.linux-armv7l-cpython-39/define_introspection.inl build/temp.linux-armv7l-cpython-39/define_introspection_and_hwcaps.inl build/temp.linux-armv7l-cpython-39/equals.inl build/temp.linux-armv7l-cpython-39/impl_x86__base_implementation.inl build/temp.linux-armv7l-cpython-39/hwcaps.o
2022-10-17T14:08:30,881   generating build/temp.linux-armv7l-cpython-39/libtrimal.a from vendor/trimal/source/Cleaner.cpp, vendor/trimal/source/Alignment/Alignment.cpp, vendor/trimal/source/Alignment/sequencesMatrix.cpp, vendor/trimal/source/Statistics/similarityMatrix.cpp, vendor/trimal/source/Statistics/Mold.cpp, vendor/trimal/source/Statistics/Gaps.cpp, vendor/trimal/source/Statistics/Manager.cpp, vendor/trimal/source/Statistics/Similarity.cpp, vendor/trimal/source/Statistics/Consistency.cpp, vendor/trimal/source/reportMessages/errorMessages.cpp, vendor/trimal/source/reportMessages/infoMessages.cpp, vendor/trimal/source/reportMessages/warningMessages.cpp, vendor/trimal/source/FormatHandling/fasta_m10_state.cpp, vendor/trimal/source/FormatHandling/phylip40_state.cpp, vendor/trimal/source/FormatHandling/phylip_paml_state.cpp, vendor/trimal/source/FormatHandling/nexus_state.cpp, vendor/trimal/source/FormatHandling/nexus_m10_state.cpp, vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp, vendor/trimal/source/FormatHandling/phylip32_state.cpp, vendor/trimal/source/FormatHandling/pir_state.cpp, vendor/trimal/source/FormatHandling/mega_sequential_state.cpp, vendor/trimal/source/FormatHandling/fasta_state.cpp, vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp, vendor/trimal/source/FormatHandling/htmlreport_state.cpp, vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp, vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp, vendor/trimal/source/FormatHandling/clustal_state.cpp, vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp, vendor/trimal/source/utils.cpp, vendor/trimal/source/InternalBenchmarker.cpp, vendor/trimal/source/trimalManager.cpp, vendor/trimal/source/VCFHandler.cpp
2022-10-17T14:08:30,881   building trimal with unix compiler
2022-10-17T14:08:30,883   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_getauxval.c -o build/temp.linux-armv7l-cpython-39/have_getauxval.o
2022-10-17T14:08:30,991   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_getauxval.o -o build/temp.linux-armv7l-cpython-39/have_getauxval
2022-10-17T14:08:31,098   checking whether function 'getauxval' is available... yes
2022-10-17T14:08:31,102   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -c build/temp.linux-armv7l-cpython-39/have_dlclose.c -o build/temp.linux-armv7l-cpython-39/have_dlclose.o
2022-10-17T14:08:31,154   build/temp.linux-armv7l-cpython-39/have_dlclose.c: In function ‘main’:
2022-10-17T14:08:31,154   build/temp.linux-armv7l-cpython-39/have_dlclose.c:4:21: warning: null argument where non-null required (argument 1) [-Wnonnull]
2022-10-17T14:08:31,155       4 |                     dlclose(0);
2022-10-17T14:08:31,155         |                     ^~~~~~~
2022-10-17T14:08:31,193   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-39/have_dlclose.o -o build/temp.linux-armv7l-cpython-39/have_dlclose
2022-10-17T14:08:31,293   /usr/bin/ld: build/temp.linux-armv7l-cpython-39/have_dlclose.o: in function `main':
2022-10-17T14:08:31,293   /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/build/temp.linux-armv7l-cpython-39/have_dlclose.c:4: undefined reference to `dlclose'
2022-10-17T14:08:31,300   collect2: error: ld returned 1 exit status
2022-10-17T14:08:31,303   checking whether function 'dlclose' is available... no
2022-10-17T14:08:31,305   generating build/temp.linux-armv7l-cpython-39/trimalManager.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/trimalManager.h
2022-10-17T14:08:31,306   patching vendor/trimal/include/trimalManager.h with patches/trimalManager.h.patch
2022-10-17T14:08:31,311   generating build/temp.linux-armv7l-cpython-39/defines.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/defines.h
2022-10-17T14:08:31,313   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/defines.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,316   generating build/temp.linux-armv7l-cpython-39/values.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/values.h
2022-10-17T14:08:31,317   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/values.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,320   generating build/temp.linux-armv7l-cpython-39/utils.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/utils.h
2022-10-17T14:08:31,321   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/utils.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,325   generating build/temp.linux-armv7l-cpython-39/reportsystem.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/reportsystem.h
2022-10-17T14:08:31,326   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/reportsystem.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,330   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/InternalBenchmarker.h
2022-10-17T14:08:31,331   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/InternalBenchmarker.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,335   generating build/temp.linux-armv7l-cpython-39/VCFHandler.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/VCFHandler.h
2022-10-17T14:08:31,336   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/VCFHandler.h -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,339   generating build/temp.linux-armv7l-cpython-39/Cleaner.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Cleaner.h
2022-10-17T14:08:31,340   patching vendor/trimal/include/Cleaner.h with patches/Cleaner.h.patch
2022-10-17T14:08:31,345   creating build/temp.linux-armv7l-cpython-39/Statistics
2022-10-17T14:08:31,346   generating build/temp.linux-armv7l-cpython-39/Statistics/Gaps.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Gaps.h
2022-10-17T14:08:31,347   patching vendor/trimal/include/Statistics/Gaps.h with patches/Gaps.h.patch
2022-10-17T14:08:31,351   generating build/temp.linux-armv7l-cpython-39/Statistics/Manager.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Manager.h
2022-10-17T14:08:31,352   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Manager.h -> build/temp.linux-armv7l-cpython-39/Statistics
2022-10-17T14:08:31,355   generating build/temp.linux-armv7l-cpython-39/Statistics/Similarity.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Similarity.h
2022-10-17T14:08:31,356   patching vendor/trimal/include/Statistics/Similarity.h with patches/Similarity.h.patch
2022-10-17T14:08:31,360   generating build/temp.linux-armv7l-cpython-39/Statistics/Consistency.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Consistency.h
2022-10-17T14:08:31,361   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Consistency.h -> build/temp.linux-armv7l-cpython-39/Statistics
2022-10-17T14:08:31,365   generating build/temp.linux-armv7l-cpython-39/Statistics/similarityMatrix.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/similarityMatrix.h
2022-10-17T14:08:31,366   patching vendor/trimal/include/Statistics/similarityMatrix.h with patches/similarityMatrix.h.patch
2022-10-17T14:08:31,369   generating build/temp.linux-armv7l-cpython-39/Statistics/Mold.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Mold.h
2022-10-17T14:08:31,370   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Statistics/Mold.h -> build/temp.linux-armv7l-cpython-39/Statistics
2022-10-17T14:08:31,373   creating build/temp.linux-armv7l-cpython-39/Alignment
2022-10-17T14:08:31,375   generating build/temp.linux-armv7l-cpython-39/Alignment/sequencesMatrix.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Alignment/sequencesMatrix.h
2022-10-17T14:08:31,376   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Alignment/sequencesMatrix.h -> build/temp.linux-armv7l-cpython-39/Alignment
2022-10-17T14:08:31,380   generating build/temp.linux-armv7l-cpython-39/Alignment/Alignment.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Alignment/Alignment.h
2022-10-17T14:08:31,381   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/Alignment/Alignment.h -> build/temp.linux-armv7l-cpython-39/Alignment
2022-10-17T14:08:31,384   creating build/temp.linux-armv7l-cpython-39/RawText
2022-10-17T14:08:31,385   generating build/temp.linux-armv7l-cpython-39/RawText/examples.txt from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/examples.txt
2022-10-17T14:08:31,386   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/examples.txt -> build/temp.linux-armv7l-cpython-39/RawText
2022-10-17T14:08:31,389   generating build/temp.linux-armv7l-cpython-39/RawText/menu.txt from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/menu.txt
2022-10-17T14:08:31,390   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/menu.txt -> build/temp.linux-armv7l-cpython-39/RawText
2022-10-17T14:08:31,394   generating build/temp.linux-armv7l-cpython-39/RawText/legacyMenu.txt from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/legacyMenu.txt
2022-10-17T14:08:31,395   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/RawText/legacyMenu.txt -> build/temp.linux-armv7l-cpython-39/RawText
2022-10-17T14:08:31,398   creating build/temp.linux-armv7l-cpython-39/FormatHandling
2022-10-17T14:08:31,399   generating build/temp.linux-armv7l-cpython-39/FormatHandling/mega_sequential_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/mega_sequential_state.h
2022-10-17T14:08:31,400   patching vendor/trimal/include/FormatHandling/mega_sequential_state.h with patches/mega_sequential_state.h.patch
2022-10-17T14:08:31,402   generating build/temp.linux-armv7l-cpython-39/FormatHandling/clustal_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/clustal_state.h
2022-10-17T14:08:31,403   patching vendor/trimal/include/FormatHandling/clustal_state.h with patches/clustal_state.h.patch
2022-10-17T14:08:31,406   generating build/temp.linux-armv7l-cpython-39/FormatHandling/FormatManager.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/FormatManager.h
2022-10-17T14:08:31,407   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/FormatManager.h -> build/temp.linux-armv7l-cpython-39/FormatHandling
2022-10-17T14:08:31,409   generating build/temp.linux-armv7l-cpython-39/FormatHandling/nexus_m10_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/nexus_m10_state.h
2022-10-17T14:08:31,410   patching vendor/trimal/include/FormatHandling/nexus_m10_state.h with patches/nexus_m10_state.h.patch
2022-10-17T14:08:31,412   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip40_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip40_state.h
2022-10-17T14:08:31,413   patching vendor/trimal/include/FormatHandling/phylip40_state.h with patches/phylip40_state.h.patch
2022-10-17T14:08:31,416   generating build/temp.linux-armv7l-cpython-39/FormatHandling/fasta_m10_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/fasta_m10_state.h
2022-10-17T14:08:31,416   patching vendor/trimal/include/FormatHandling/fasta_m10_state.h with patches/fasta_m10_state.h.patch
2022-10-17T14:08:31,419   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip40_m10_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip40_m10_state.h
2022-10-17T14:08:31,419   patching vendor/trimal/include/FormatHandling/phylip40_m10_state.h with patches/phylip40_m10_state.h.patch
2022-10-17T14:08:31,422   generating build/temp.linux-armv7l-cpython-39/FormatHandling/BaseFormatHandler.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/BaseFormatHandler.h
2022-10-17T14:08:31,422   patching vendor/trimal/include/FormatHandling/BaseFormatHandler.h with patches/BaseFormatHandler.h.patch
2022-10-17T14:08:31,425   generating build/temp.linux-armv7l-cpython-39/FormatHandling/formats_header.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/formats_header.h
2022-10-17T14:08:31,426   copying /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/formats_header.h -> build/temp.linux-armv7l-cpython-39/FormatHandling
2022-10-17T14:08:31,429   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip32_m10_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip32_m10_state.h
2022-10-17T14:08:31,429   patching vendor/trimal/include/FormatHandling/phylip32_m10_state.h with patches/phylip32_m10_state.h.patch
2022-10-17T14:08:31,432   generating build/temp.linux-armv7l-cpython-39/FormatHandling/htmlreport_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/htmlreport_state.h
2022-10-17T14:08:31,432   patching vendor/trimal/include/FormatHandling/htmlreport_state.h with patches/htmlreport_state.h.patch
2022-10-17T14:08:31,435   generating build/temp.linux-armv7l-cpython-39/FormatHandling/fasta_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/fasta_state.h
2022-10-17T14:08:31,436   patching vendor/trimal/include/FormatHandling/fasta_state.h with patches/fasta_state.h.patch
2022-10-17T14:08:31,438   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip32_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip32_state.h
2022-10-17T14:08:31,439   patching vendor/trimal/include/FormatHandling/phylip32_state.h with patches/phylip32_state.h.patch
2022-10-17T14:08:31,441   generating build/temp.linux-armv7l-cpython-39/FormatHandling/pir_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/pir_state.h
2022-10-17T14:08:31,442   patching vendor/trimal/include/FormatHandling/pir_state.h with patches/pir_state.h.patch
2022-10-17T14:08:31,444   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip_paml_m10_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip_paml_m10_state.h
2022-10-17T14:08:31,445   patching vendor/trimal/include/FormatHandling/phylip_paml_m10_state.h with patches/phylip_paml_m10_state.h.patch
2022-10-17T14:08:31,448   generating build/temp.linux-armv7l-cpython-39/FormatHandling/phylip_paml_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/phylip_paml_state.h
2022-10-17T14:08:31,448   patching vendor/trimal/include/FormatHandling/phylip_paml_state.h with patches/phylip_paml_state.h.patch
2022-10-17T14:08:31,451   generating build/temp.linux-armv7l-cpython-39/FormatHandling/mega_interleaved_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/mega_interleaved_state.h
2022-10-17T14:08:31,452   patching vendor/trimal/include/FormatHandling/mega_interleaved_state.h with patches/mega_interleaved_state.h.patch
2022-10-17T14:08:31,454   generating build/temp.linux-armv7l-cpython-39/FormatHandling/nexus_state.h from /tmp/pip-wheel-znbvurrr/pytrimal_6486895dc3ce4f7298d8d6c447583004/vendor/trimal/include/FormatHandling/nexus_state.h
2022-10-17T14:08:31,455   patching vendor/trimal/include/FormatHandling/nexus_state.h with patches/nexus_state.h.patch
2022-10-17T14:08:31,457   generating build/temp.linux-armv7l-cpython-39/Cleaner.cpp from vendor/trimal/source/Cleaner.cpp
2022-10-17T14:08:31,458   patching vendor/trimal/source/Cleaner.cpp with patches/Cleaner.cpp.patch
2022-10-17T14:08:31,464   generating build/temp.linux-armv7l-cpython-39/Alignment.cpp from vendor/trimal/source/Alignment/Alignment.cpp
2022-10-17T14:08:31,464   copying vendor/trimal/source/Alignment/Alignment.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,469   generating build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp from vendor/trimal/source/Alignment/sequencesMatrix.cpp
2022-10-17T14:08:31,469   copying vendor/trimal/source/Alignment/sequencesMatrix.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,472   generating build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp from vendor/trimal/source/Statistics/similarityMatrix.cpp
2022-10-17T14:08:31,472   copying vendor/trimal/source/Statistics/similarityMatrix.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,475   generating build/temp.linux-armv7l-cpython-39/Mold.cpp from vendor/trimal/source/Statistics/Mold.cpp
2022-10-17T14:08:31,475   copying vendor/trimal/source/Statistics/Mold.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,478   generating build/temp.linux-armv7l-cpython-39/Gaps.cpp from vendor/trimal/source/Statistics/Gaps.cpp
2022-10-17T14:08:31,478   copying vendor/trimal/source/Statistics/Gaps.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,481   generating build/temp.linux-armv7l-cpython-39/Manager.cpp from vendor/trimal/source/Statistics/Manager.cpp
2022-10-17T14:08:31,482   copying vendor/trimal/source/Statistics/Manager.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,484   generating build/temp.linux-armv7l-cpython-39/Similarity.cpp from vendor/trimal/source/Statistics/Similarity.cpp
2022-10-17T14:08:31,484   copying vendor/trimal/source/Statistics/Similarity.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,487   generating build/temp.linux-armv7l-cpython-39/Consistency.cpp from vendor/trimal/source/Statistics/Consistency.cpp
2022-10-17T14:08:31,488   copying vendor/trimal/source/Statistics/Consistency.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,490   generating build/temp.linux-armv7l-cpython-39/errorMessages.cpp from vendor/trimal/source/reportMessages/errorMessages.cpp
2022-10-17T14:08:31,491   copying vendor/trimal/source/reportMessages/errorMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,494   generating build/temp.linux-armv7l-cpython-39/infoMessages.cpp from vendor/trimal/source/reportMessages/infoMessages.cpp
2022-10-17T14:08:31,494   copying vendor/trimal/source/reportMessages/infoMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,496   generating build/temp.linux-armv7l-cpython-39/warningMessages.cpp from vendor/trimal/source/reportMessages/warningMessages.cpp
2022-10-17T14:08:31,497   copying vendor/trimal/source/reportMessages/warningMessages.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,499   generating build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp from vendor/trimal/source/FormatHandling/fasta_m10_state.cpp
2022-10-17T14:08:31,499   patching vendor/trimal/source/FormatHandling/fasta_m10_state.cpp with patches/fasta_m10_state.cpp.patch
2022-10-17T14:08:31,501   generating build/temp.linux-armv7l-cpython-39/phylip40_state.cpp from vendor/trimal/source/FormatHandling/phylip40_state.cpp
2022-10-17T14:08:31,502   patching vendor/trimal/source/FormatHandling/phylip40_state.cpp with patches/phylip40_state.cpp.patch
2022-10-17T14:08:31,505   generating build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp from vendor/trimal/source/FormatHandling/phylip_paml_state.cpp
2022-10-17T14:08:31,505   patching vendor/trimal/source/FormatHandling/phylip_paml_state.cpp with patches/phylip_paml_state.cpp.patch
2022-10-17T14:08:31,508   generating build/temp.linux-armv7l-cpython-39/nexus_state.cpp from vendor/trimal/source/FormatHandling/nexus_state.cpp
2022-10-17T14:08:31,508   patching vendor/trimal/source/FormatHandling/nexus_state.cpp with patches/nexus_state.cpp.patch
2022-10-17T14:08:31,511   generating build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp from vendor/trimal/source/FormatHandling/nexus_m10_state.cpp
2022-10-17T14:08:31,511   patching vendor/trimal/source/FormatHandling/nexus_m10_state.cpp with patches/nexus_m10_state.cpp.patch
2022-10-17T14:08:31,514   generating build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp
2022-10-17T14:08:31,514   patching vendor/trimal/source/FormatHandling/phylip40_m10_state.cpp with patches/phylip40_m10_state.cpp.patch
2022-10-17T14:08:31,517   generating build/temp.linux-armv7l-cpython-39/phylip32_state.cpp from vendor/trimal/source/FormatHandling/phylip32_state.cpp
2022-10-17T14:08:31,517   patching vendor/trimal/source/FormatHandling/phylip32_state.cpp with patches/phylip32_state.cpp.patch
2022-10-17T14:08:31,520   generating build/temp.linux-armv7l-cpython-39/pir_state.cpp from vendor/trimal/source/FormatHandling/pir_state.cpp
2022-10-17T14:08:31,520   patching vendor/trimal/source/FormatHandling/pir_state.cpp with patches/pir_state.cpp.patch
2022-10-17T14:08:31,523   generating build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp from vendor/trimal/source/FormatHandling/mega_sequential_state.cpp
2022-10-17T14:08:31,524   patching vendor/trimal/source/FormatHandling/mega_sequential_state.cpp with patches/mega_sequential_state.cpp.patch
2022-10-17T14:08:31,526   generating build/temp.linux-armv7l-cpython-39/fasta_state.cpp from vendor/trimal/source/FormatHandling/fasta_state.cpp
2022-10-17T14:08:31,527   patching vendor/trimal/source/FormatHandling/fasta_state.cpp with patches/fasta_state.cpp.patch
2022-10-17T14:08:31,530   generating build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp
2022-10-17T14:08:31,530   patching vendor/trimal/source/FormatHandling/phylip32_m10_state.cpp with patches/phylip32_m10_state.cpp.patch
2022-10-17T14:08:31,533   generating build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp from vendor/trimal/source/FormatHandling/htmlreport_state.cpp
2022-10-17T14:08:31,533   patching vendor/trimal/source/FormatHandling/htmlreport_state.cpp with patches/htmlreport_state.cpp.patch
2022-10-17T14:08:31,536   generating build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp from vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp
2022-10-17T14:08:31,536   patching vendor/trimal/source/FormatHandling/phylip_paml_m10_state.cpp with patches/phylip_paml_m10_state.cpp.patch
2022-10-17T14:08:31,538   generating build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp from vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp
2022-10-17T14:08:31,539   patching vendor/trimal/source/FormatHandling/mega_interleaved_state.cpp with patches/mega_interleaved_state.cpp.patch
2022-10-17T14:08:31,541   generating build/temp.linux-armv7l-cpython-39/clustal_state.cpp from vendor/trimal/source/FormatHandling/clustal_state.cpp
2022-10-17T14:08:31,542   patching vendor/trimal/source/FormatHandling/clustal_state.cpp with patches/clustal_state.cpp.patch
2022-10-17T14:08:31,545   generating build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp from vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp
2022-10-17T14:08:31,545   copying vendor/trimal/source/FormatHandling/BaseFormatHandler.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,548   generating build/temp.linux-armv7l-cpython-39/utils.cpp from vendor/trimal/source/utils.cpp
2022-10-17T14:08:31,548   copying vendor/trimal/source/utils.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,551   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp from vendor/trimal/source/InternalBenchmarker.cpp
2022-10-17T14:08:31,552   copying vendor/trimal/source/InternalBenchmarker.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,554   generating build/temp.linux-armv7l-cpython-39/trimalManager.cpp from vendor/trimal/source/trimalManager.cpp
2022-10-17T14:08:31,554   copying vendor/trimal/source/trimalManager.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,559   generating build/temp.linux-armv7l-cpython-39/VCFHandler.cpp from vendor/trimal/source/VCFHandler.cpp
2022-10-17T14:08:31,559   copying vendor/trimal/source/VCFHandler.cpp -> build/temp.linux-armv7l-cpython-39
2022-10-17T14:08:31,566   generating build/temp.linux-armv7l-cpython-39/sequencesMatrix.o from build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp
2022-10-17T14:08:31,566   generating build/temp.linux-armv7l-cpython-39/Cleaner.o from build/temp.linux-armv7l-cpython-39/Cleaner.cpp
2022-10-17T14:08:31,567   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Cleaner.cpp -o build/temp.linux-armv7l-cpython-39/Cleaner.o
2022-10-17T14:08:31,567   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/sequencesMatrix.cpp -o build/temp.linux-armv7l-cpython-39/sequencesMatrix.o
2022-10-17T14:08:31,576   generating build/temp.linux-armv7l-cpython-39/Manager.o from build/temp.linux-armv7l-cpython-39/Manager.cpp
2022-10-17T14:08:31,577   generating build/temp.linux-armv7l-cpython-39/Mold.o from build/temp.linux-armv7l-cpython-39/Mold.cpp
2022-10-17T14:08:31,580   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Manager.cpp -o build/temp.linux-armv7l-cpython-39/Manager.o
2022-10-17T14:08:31,589   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Mold.cpp -o build/temp.linux-armv7l-cpython-39/Mold.o
2022-10-17T14:08:32,158   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1449: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:32,159    1449 |     #pragma omp parallel for num_threads(NUMTHREADS) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:32,159         |
2022-10-17T14:08:32,159   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1457: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:32,160    1457 |     #pragma omp parallel for num_threads(NUMTHREADS) private(j, k, hit, dst) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:32,160         |
2022-10-17T14:08:34,238   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘Alignment* Cleaner::cleanStrict(int, const int*, float, const float*, bool, bool)’:
2022-10-17T14:08:34,238   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:519:12: warning: unused variable ‘x’ [-Wunused-variable]
2022-10-17T14:08:34,238     519 |     int i, x, pos, counter, lenBlock;
2022-10-17T14:08:34,239         |            ^
2022-10-17T14:08:34,262   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘Alignment* Cleaner::getClustering(float)’:
2022-10-17T14:08:34,263   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1217:12: warning: unused variable ‘j’ [-Wunused-variable]
2022-10-17T14:08:34,263    1217 |     int i, j, *clustering;
2022-10-17T14:08:34,263         |            ^
2022-10-17T14:08:34,272   build/temp.linux-armv7l-cpython-39/Cleaner.cpp: In member function ‘void Cleaner::removeAllGapsSeqsAndCols(bool, bool)’:
2022-10-17T14:08:34,272   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1382:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:34,273    1382 |             for (j = 0; j < alig->sequences[i].length(); j++) {
2022-10-17T14:08:34,273         |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:34,273   build/temp.linux-armv7l-cpython-39/Cleaner.cpp:1393:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:34,274    1393 |             if (j == alig->sequences[i].length()) {
2022-10-17T14:08:34,274         |                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:34,482   generating build/temp.linux-armv7l-cpython-39/Similarity.o from build/temp.linux-armv7l-cpython-39/Similarity.cpp
2022-10-17T14:08:34,483   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Similarity.cpp -o build/temp.linux-armv7l-cpython-39/Similarity.o
2022-10-17T14:08:34,694   generating build/temp.linux-armv7l-cpython-39/similarityMatrix.o from build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp
2022-10-17T14:08:34,695   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/similarityMatrix.cpp -o build/temp.linux-armv7l-cpython-39/similarityMatrix.o
2022-10-17T14:08:34,949   build/temp.linux-armv7l-cpython-39/Similarity.cpp:115: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:34,950     115 |         #pragma omp parallel for num_threads(NUMTHREADS) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:34,950         |
2022-10-17T14:08:34,950   build/temp.linux-armv7l-cpython-39/Similarity.cpp:124: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:34,950     124 |         #pragma omp parallel for num_threads(NUMTHREADS) private(j, k, sum, length) if(alig->originalNumberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:34,951         |
2022-10-17T14:08:36,701   generating build/temp.linux-armv7l-cpython-39/Gaps.o from build/temp.linux-armv7l-cpython-39/Gaps.cpp
2022-10-17T14:08:36,702   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Gaps.cpp -o build/temp.linux-armv7l-cpython-39/Gaps.o
2022-10-17T14:08:38,111   generating build/temp.linux-armv7l-cpython-39/Consistency.o from build/temp.linux-armv7l-cpython-39/Consistency.cpp
2022-10-17T14:08:38,112   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Consistency.cpp -o build/temp.linux-armv7l-cpython-39/Consistency.o
2022-10-17T14:08:39,709   generating build/temp.linux-armv7l-cpython-39/Alignment.o from build/temp.linux-armv7l-cpython-39/Alignment.cpp
2022-10-17T14:08:39,709   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Alignment.cpp -o build/temp.linux-armv7l-cpython-39/Alignment.o
2022-10-17T14:08:40,234   generating build/temp.linux-armv7l-cpython-39/infoMessages.o from build/temp.linux-armv7l-cpython-39/infoMessages.cpp
2022-10-17T14:08:40,234   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/infoMessages.cpp -o build/temp.linux-armv7l-cpython-39/infoMessages.o
2022-10-17T14:08:40,273   build/temp.linux-armv7l-cpython-39/Alignment.cpp:395: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:40,274     395 |     #pragma omp parallel for num_threads(NUMTHREADS) if(numberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:40,274         |
2022-10-17T14:08:40,274   build/temp.linux-armv7l-cpython-39/Alignment.cpp:398: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:40,275     398 |     #pragma omp parallel for num_threads(NUMTHREADS) collapse(2) private(k, shared, referenceLength) if(numberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:40,275         |
2022-10-17T14:08:40,275   build/temp.linux-armv7l-cpython-39/Alignment.cpp:930: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
2022-10-17T14:08:40,276     930 |     #pragma omp parallel for private(k, mx, avg, pos) reduction(+: avgSeq, maxAvgSeq) num_threads(NUMTHREADS) if(originalNumberOfSequences>MINPARALLELSIZE)
2022-10-17T14:08:40,276         |
2022-10-17T14:08:42,383   generating build/temp.linux-armv7l-cpython-39/fasta_m10_state.o from build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp
2022-10-17T14:08:42,384   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/fasta_m10_state.o
2022-10-17T14:08:42,403   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘Alignment* Alignment::getTranslationCDS(Alignment*)’:
2022-10-17T14:08:42,403   build/temp.linux-armv7l-cpython-39/Alignment.cpp:204:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,404     204 |         for (y = 0, counter = 0; y < ProtAlig->sequences[x].size(); y++) {
2022-10-17T14:08:42,405         |                                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:42,421   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘bool Alignment::prepareCodingSequence(bool, bool, Alignment*)’:
2022-10-17T14:08:42,422   build/temp.linux-armv7l-cpython-39/Alignment.cpp:614:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,422     614 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-10-17T14:08:42,422         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,426   build/temp.linux-armv7l-cpython-39/Alignment.cpp:641:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,426     641 |         } while (found != string::npos);
2022-10-17T14:08:42,426         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,427   build/temp.linux-armv7l-cpython-39/Alignment.cpp:651:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,427     651 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-10-17T14:08:42,427         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,431   build/temp.linux-armv7l-cpython-39/Alignment.cpp:676:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,431     676 |         } while (found != string::npos);
2022-10-17T14:08:42,432         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,432   build/temp.linux-armv7l-cpython-39/Alignment.cpp:685:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,432     685 |             if ((found != string::npos) && (((int) found % 3) == 0)) {
2022-10-17T14:08:42,433         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,437   build/temp.linux-armv7l-cpython-39/Alignment.cpp:711:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘const size_type’ {aka ‘const unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,438     711 |         } while (found != string::npos);
2022-10-17T14:08:42,438         |                  ~~~~~~^~~~~~~~~~~~~~~
2022-10-17T14:08:42,450   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘bool Alignment::fillMatrices(bool, bool)’:
2022-10-17T14:08:42,451   build/temp.linux-armv7l-cpython-39/Alignment.cpp:810:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,451     810 |             for (j = 0; j < sequences[i].length(); j++)
2022-10-17T14:08:42,451         |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:42,453   build/temp.linux-armv7l-cpython-39/Alignment.cpp:837:35: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:08:42,454     837 |         if (sequences[i].length() != numberOfResidues) {
2022-10-17T14:08:42,454         |             ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:42,457   build/temp.linux-armv7l-cpython-39/Alignment.cpp: In member function ‘void Alignment::printAlignmentInfo(std::ostream&)’:
2022-10-17T14:08:42,457   build/temp.linux-armv7l-cpython-39/Alignment.cpp:889:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:42,458     889 |         for (j = 0, valid_res = 0; j < sequences[i].length(); j++)
2022-10-17T14:08:42,458         |                                    ~~^~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:42,912   generating build/temp.linux-armv7l-cpython-39/warningMessages.o from build/temp.linux-armv7l-cpython-39/warningMessages.cpp
2022-10-17T14:08:42,912   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/warningMessages.cpp -o build/temp.linux-armv7l-cpython-39/warningMessages.o
2022-10-17T14:08:44,933   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp: In member function ‘virtual bool FormatHandling::fasta_m10_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-10-17T14:08:44,934   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:99:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:44,934      99 |         for (j = 0, k = 0; j < alignment.sequences[i].length(); j++)
2022-10-17T14:08:44,935         |                            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:44,935   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:103:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:44,935     103 |                 if (!lastcharIsnewline && j == alignment.sequences[i].length() -1 )
2022-10-17T14:08:44,936         |                                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:44,937   build/temp.linux-armv7l-cpython-39/fasta_m10_state.cpp:114:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:44,937     114 |                 if ((k % 60 == 0 || j == alignment.sequences[i].length() - 1))
2022-10-17T14:08:44,937         |                                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:45,605   generating build/temp.linux-armv7l-cpython-39/phylip_paml_state.o from build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp
2022-10-17T14:08:45,605   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip_paml_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip_paml_state.o
2022-10-17T14:08:45,974   generating build/temp.linux-armv7l-cpython-39/phylip40_state.o from build/temp.linux-armv7l-cpython-39/phylip40_state.cpp
2022-10-17T14:08:45,975   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip40_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip40_state.o
2022-10-17T14:08:46,287   generating build/temp.linux-armv7l-cpython-39/errorMessages.o from build/temp.linux-armv7l-cpython-39/errorMessages.cpp
2022-10-17T14:08:46,288   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/errorMessages.cpp -o build/temp.linux-armv7l-cpython-39/errorMessages.o
2022-10-17T14:08:49,076   generating build/temp.linux-armv7l-cpython-39/nexus_state.o from build/temp.linux-armv7l-cpython-39/nexus_state.cpp
2022-10-17T14:08:49,076   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/nexus_state.cpp -o build/temp.linux-armv7l-cpython-39/nexus_state.o
2022-10-17T14:08:49,402   generating build/temp.linux-armv7l-cpython-39/nexus_m10_state.o from build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp
2022-10-17T14:08:49,403   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/nexus_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/nexus_m10_state.o
2022-10-17T14:08:49,872   generating build/temp.linux-armv7l-cpython-39/phylip32_state.o from build/temp.linux-armv7l-cpython-39/phylip32_state.cpp
2022-10-17T14:08:49,873   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip32_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip32_state.o
2022-10-17T14:08:53,880   generating build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp
2022-10-17T14:08:53,881   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o
2022-10-17T14:08:53,926   generating build/temp.linux-armv7l-cpython-39/mega_sequential_state.o from build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp
2022-10-17T14:08:53,926   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp -o build/temp.linux-armv7l-cpython-39/mega_sequential_state.o
2022-10-17T14:08:54,017   generating build/temp.linux-armv7l-cpython-39/pir_state.o from build/temp.linux-armv7l-cpython-39/pir_state.cpp
2022-10-17T14:08:54,018   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/pir_state.cpp -o build/temp.linux-armv7l-cpython-39/pir_state.o
2022-10-17T14:08:56,562   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp: In member function ‘virtual bool FormatHandling::mega_sequential_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-10-17T14:08:56,563   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:339:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:56,563     339 |             for(j = 0, l = 0; j < alignment.sequences[i].length(); j ++)
2022-10-17T14:08:56,563         |                               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:56,570   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:293:15: warning: unused variable ‘k’ [-Wunused-variable]
2022-10-17T14:08:56,570     293 |     int i, j, k, l, m;
2022-10-17T14:08:56,570         |               ^
2022-10-17T14:08:56,571   build/temp.linux-armv7l-cpython-39/mega_sequential_state.cpp:293:21: warning: unused variable ‘m’ [-Wunused-variable]
2022-10-17T14:08:56,572     293 |     int i, j, k, l, m;
2022-10-17T14:08:56,572         |                     ^
2022-10-17T14:08:56,611   build/temp.linux-armv7l-cpython-39/pir_state.cpp: In member function ‘virtual bool FormatHandling::pir_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-10-17T14:08:56,611   build/temp.linux-armv7l-cpython-39/pir_state.cpp:227:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:56,611     227 |         for (j = 0, k = 0, l = 0; j < alignment.sequences[i].length(); j++) {
2022-10-17T14:08:56,612         |                                   ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:56,613   build/temp.linux-armv7l-cpython-39/pir_state.cpp:235:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:08:56,614     235 |                 if (j == alignment.sequences[i].length() - 1);
2022-10-17T14:08:56,614         |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:56,617   build/temp.linux-armv7l-cpython-39/pir_state.cpp:188:18: warning: variable ‘l’ set but not used [-Wunused-but-set-variable]
2022-10-17T14:08:56,617     188 |     int i, j, k, l;
2022-10-17T14:08:56,618         |                  ^
2022-10-17T14:08:57,092   build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp: In member function ‘virtual bool FormatHandling::phylip40_m10_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-10-17T14:08:57,092   build/temp.linux-armv7l-cpython-39/phylip40_m10_state.cpp:108:19: warning: ‘k’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2022-10-17T14:08:57,093     108 |     for (i = k; i < alignment.originalNumberOfResidues; i=k)
2022-10-17T14:08:57,093         |                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:08:57,497   generating build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp
2022-10-17T14:08:57,498   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip32_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o
2022-10-17T14:08:57,845   generating build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o from build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp
2022-10-17T14:08:57,846   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.cpp -o build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o
2022-10-17T14:08:58,176   generating build/temp.linux-armv7l-cpython-39/fasta_state.o from build/temp.linux-armv7l-cpython-39/fasta_state.cpp
2022-10-17T14:08:58,176   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/fasta_state.cpp -o build/temp.linux-armv7l-cpython-39/fasta_state.o
2022-10-17T14:08:59,545   generating build/temp.linux-armv7l-cpython-39/clustal_state.o from build/temp.linux-armv7l-cpython-39/clustal_state.cpp
2022-10-17T14:08:59,546   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/clustal_state.cpp -o build/temp.linux-armv7l-cpython-39/clustal_state.o
2022-10-17T14:09:00,734   build/temp.linux-armv7l-cpython-39/fasta_state.cpp: In member function ‘virtual int FormatHandling::fasta_state::CheckAlignment(std::istream*)’:
2022-10-17T14:09:00,735   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:48:9: warning: case label value is less than minimum value for type [-Wswitch-outside-range]
2022-10-17T14:09:00,735      48 |         case EOF: return 1;
2022-10-17T14:09:00,735         |         ^~~~
2022-10-17T14:09:00,752   build/temp.linux-armv7l-cpython-39/fasta_state.cpp: In member function ‘virtual bool FormatHandling::fasta_state::SaveAlignment(const Alignment&, std::ostream*)’:
2022-10-17T14:09:00,753   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:213:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:00,753     213 |         for (j = 0, k = 0; j < alignment.sequences[i].length(); j++)
2022-10-17T14:09:00,753         |                            ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:00,754   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:217:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:00,755     217 |                 if (!lastcharIsnewline && j == alignment.sequences[i].length() -1 )
2022-10-17T14:09:00,755         |                                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:00,758   build/temp.linux-armv7l-cpython-39/fasta_state.cpp:228:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:00,758     228 |                 if (k % 60 == 0 || j == alignment.sequences[i].length() -1 )
2022-10-17T14:09:00,759         |                                    ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:01,096   generating build/temp.linux-armv7l-cpython-39/htmlreport_state.o from build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp
2022-10-17T14:09:01,097   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/htmlreport_state.cpp -o build/temp.linux-armv7l-cpython-39/htmlreport_state.o
2022-10-17T14:09:01,253   generating build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o from build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp
2022-10-17T14:09:01,254   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/mega_interleaved_state.cpp -o build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o
2022-10-17T14:09:01,986   generating build/temp.linux-armv7l-cpython-39/utils.o from build/temp.linux-armv7l-cpython-39/utils.cpp
2022-10-17T14:09:01,986   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/utils.cpp -o build/temp.linux-armv7l-cpython-39/utils.o
2022-10-17T14:09:03,378   generating build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o from build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp
2022-10-17T14:09:03,379   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/BaseFormatHandler.cpp -o build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o
2022-10-17T14:09:04,087   build/temp.linux-armv7l-cpython-39/utils.cpp: In function ‘std::string utils::removeCharacter(char, std::string)’:
2022-10-17T14:09:04,088   build/temp.linux-armv7l-cpython-39/utils.cpp:490:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,088     490 |         while (pos != (int) std::string::npos) {
2022-10-17T14:09:04,088         |                ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,102   build/temp.linux-armv7l-cpython-39/utils.cpp: In function ‘int* utils::readNumbers(const string&)’:
2022-10-17T14:09:04,103   build/temp.linux-armv7l-cpython-39/utils.cpp:632:52: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,103     632 |         while ((comma = line.find(',', comma + 1)) != (int) std::string::npos)
2022-10-17T14:09:04,103         |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,105   build/temp.linux-armv7l-cpython-39/utils.cpp:646:44: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,105     646 |             if (((separ < comma) || (comma == (int) std::string::npos)) && (separ != (int) std::string::npos)) {
2022-10-17T14:09:04,105         |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,106   build/temp.linux-armv7l-cpython-39/utils.cpp:646:83: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,107     646 |             if (((separ < comma) || (comma == (int) std::string::npos)) && (separ != (int) std::string::npos)) {
2022-10-17T14:09:04,107         |                                                                             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,109   build/temp.linux-armv7l-cpython-39/utils.cpp:650:50: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,109     650 |             } else if ((separ > comma) || (separ == (int) std::string::npos)) {
2022-10-17T14:09:04,109         |                                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,111   build/temp.linux-armv7l-cpython-39/utils.cpp:666:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2022-10-17T14:09:04,111     666 |             if (comma == (int) std::string::npos)
2022-10-17T14:09:04,112         |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:04,556   generating build/temp.linux-armv7l-cpython-39/trimalManager.o from build/temp.linux-armv7l-cpython-39/trimalManager.cpp
2022-10-17T14:09:04,557   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/trimalManager.cpp -o build/temp.linux-armv7l-cpython-39/trimalManager.o
2022-10-17T14:09:06,948   In file included from build/temp.linux-armv7l-cpython-39/trimalManager.cpp:42:
2022-10-17T14:09:06,948   build/temp.linux-armv7l-cpython-39/VCFHandler.h: In constructor ‘ngs::__internal::vcfFeature::vcfFeature()’:
2022-10-17T14:09:06,949   build/temp.linux-armv7l-cpython-39/VCFHandler.h:87:19: warning: ‘ngs::__internal::vcfFeature::quality’ will be initialized after [-Wreorder]
2022-10-17T14:09:06,949      87 |             float quality;
2022-10-17T14:09:06,949         |                   ^~~~~~~
2022-10-17T14:09:06,949   build/temp.linux-armv7l-cpython-39/VCFHandler.h:85:18: warning:   ‘bool ngs::__internal::vcfFeature::filter’ [-Wreorder]
2022-10-17T14:09:06,950      85 |             bool filter;
2022-10-17T14:09:06,950         |                  ^~~~~~
2022-10-17T14:09:06,950   build/temp.linux-armv7l-cpython-39/VCFHandler.h:96:13: warning:   when initialized here [-Wreorder]
2022-10-17T14:09:06,950      96 |             vcfFeature() : position(0), quality(0.0F), filter(false), readDepthIndex(0)
2022-10-17T14:09:06,950         |             ^~~~~~~~~~
2022-10-17T14:09:07,178   build/temp.linux-armv7l-cpython-39/trimalManager.cpp: In member function ‘bool trimAlManager::check_outputs_coincidence()’:
2022-10-17T14:09:07,179   build/temp.linux-armv7l-cpython-39/trimalManager.cpp:1419:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::array<char*, 4>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:07,179    1419 |     for (int i = 0, x = 0; i < outFiles.size(); i++) {
2022-10-17T14:09:07,180         |                            ~~^~~~~~~~~~~~~~~~~
2022-10-17T14:09:07,180   build/temp.linux-armv7l-cpython-39/trimalManager.cpp:1421:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::array<char*, 4>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:07,180    1421 |             for (x = i + 1; x < outFiles.size(); x++) {
2022-10-17T14:09:07,181         |                             ~~^~~~~~~~~~~~~~~~~
2022-10-17T14:09:07,472   generating build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o from build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp
2022-10-17T14:09:07,473   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/InternalBenchmarker.cpp -o build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o
2022-10-17T14:09:16,914   generating build/temp.linux-armv7l-cpython-39/VCFHandler.o from build/temp.linux-armv7l-cpython-39/VCFHandler.cpp
2022-10-17T14:09:16,914   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -DHAVE_STRONG_GETAUXVAL=1 -Ipytrimal/patch -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/VCFHandler.cpp -o build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-10-17T14:09:18,458   In file included from build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:30:
2022-10-17T14:09:18,459   build/temp.linux-armv7l-cpython-39/VCFHandler.h: In constructor ‘ngs::__internal::vcfFeature::vcfFeature()’:
2022-10-17T14:09:18,459   build/temp.linux-armv7l-cpython-39/VCFHandler.h:87:19: warning: ‘ngs::__internal::vcfFeature::quality’ will be initialized after [-Wreorder]
2022-10-17T14:09:18,459      87 |             float quality;
2022-10-17T14:09:18,459         |                   ^~~~~~~
2022-10-17T14:09:18,459   build/temp.linux-armv7l-cpython-39/VCFHandler.h:85:18: warning:   ‘bool ngs::__internal::vcfFeature::filter’ [-Wreorder]
2022-10-17T14:09:18,460      85 |             bool filter;
2022-10-17T14:09:18,460         |                  ^~~~~~
2022-10-17T14:09:18,460   build/temp.linux-armv7l-cpython-39/VCFHandler.h:96:13: warning:   when initialized here [-Wreorder]
2022-10-17T14:09:18,460      96 |             vcfFeature() : position(0), quality(0.0F), filter(false), readDepthIndex(0)
2022-10-17T14:09:18,460         |             ^~~~~~~~~~
2022-10-17T14:09:18,480   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘bool ngs::__internal::checkContigsWithReference(const AlignmentVector&, const StringVector&)’:
2022-10-17T14:09:18,480   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:153:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Alignment*>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,480     153 |                 for (i = 0; i < sources.size(); i++) {
2022-10-17T14:09:18,480         |                             ~~^~~~~~~~~~~~~~~~
2022-10-17T14:09:18,480   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:162:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Alignment*>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,481     162 |                 if (i == sources.size()) {
2022-10-17T14:09:18,481         |                     ~~^~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,487   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::increaseSequencesInAlignment(const AlignmentVector&, const StringVector&)’:
2022-10-17T14:09:18,487   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:198:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,487     198 |                 for (int i = 1; i < donors.size() + 1; i++) {
2022-10-17T14:09:18,487         |                                 ~~^~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,493   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::applyVariantCallingFiles(const AlignmentVector&, const StringVector&, const StringVector&, const std::vector<std::vector<int> >&, float, float, bool, const char*)’:
2022-10-17T14:09:18,493   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:337:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,494     337 |             for (int vcfIndex = 0; vcfIndex < filenames.size(); vcfIndex++) {
2022-10-17T14:09:18,494         |                                    ~~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,494   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:360:59: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,494     360 |                         for (contigIndex = 0; contigIndex < contigs.size(); contigIndex++)
2022-10-17T14:09:18,494         |                                               ~~~~~~~~~~~~^~~~~~~~~~~~~~~~
2022-10-17T14:09:18,495   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:365:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,495     365 |                         if (contigIndex == contigs.size()) {
2022-10-17T14:09:18,495         |                             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,497   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:394:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,498     394 |                     for (int donorID = 0; donorID < feature.donorsInfo.size(); donorID++)
2022-10-17T14:09:18,498         |                                           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,519   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:397:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,519     397 |                         if (donorID >= donorsPositions[vcfIndex].size())
2022-10-17T14:09:18,519         |                             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,529   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::extractContigsFromLine(char*, ngs::StringVector&)’:
2022-10-17T14:09:18,530   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:528:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,530     528 |                 for (U = 0; U < contigs.size(); U++)
2022-10-17T14:09:18,530         |                             ~~^~~~~~~~~~~~~~~~
2022-10-17T14:09:18,530   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:533:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,530     533 |                 if (U == contigs.size())
2022-10-17T14:09:18,531         |                     ~~^~~~~~~~~~~~~~~~~
2022-10-17T14:09:18,531   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::extractDonorsFromLine(char*, std::vector<int>&, ngs::StringVector&)’:
2022-10-17T14:09:18,532   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:557:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,532     557 |                 for (U = 0; U < donors.size(); U++) {
2022-10-17T14:09:18,532         |                             ~~^~~~~~~~~~~~~~~
2022-10-17T14:09:18,532   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:564:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,532     564 |                 if (U == donors.size()) {
2022-10-17T14:09:18,532         |                     ~~^~~~~~~~~~~~~~~~
2022-10-17T14:09:18,533   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp: In function ‘void ngs::__internal::obtainContigsAndDonors(const StringVector&, ngs::StringVector&, ngs::StringVector&, std::vector<std::vector<int> >&)’:
2022-10-17T14:09:18,533   build/temp.linux-armv7l-cpython-39/VCFHandler.cpp:591:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘unsigned int’} [-Wsign-compare]
2022-10-17T14:09:18,534     591 |             for (int C = 0; C < filenames.size(); C++) {
2022-10-17T14:09:18,534         |                             ~~^~~~~~~~~~~~~~~~~~
2022-10-17T14:09:22,156   generating build/temp.linux-armv7l-cpython-39/libtrimal.a from build/temp.linux-armv7l-cpython-39/Cleaner.o, build/temp.linux-armv7l-cpython-39/Alignment.o, build/temp.linux-armv7l-cpython-39/sequencesMatrix.o, build/temp.linux-armv7l-cpython-39/similarityMatrix.o, build/temp.linux-armv7l-cpython-39/Mold.o, build/temp.linux-armv7l-cpython-39/Gaps.o, build/temp.linux-armv7l-cpython-39/Manager.o, build/temp.linux-armv7l-cpython-39/Similarity.o, build/temp.linux-armv7l-cpython-39/Consistency.o, build/temp.linux-armv7l-cpython-39/errorMessages.o, build/temp.linux-armv7l-cpython-39/infoMessages.o, build/temp.linux-armv7l-cpython-39/warningMessages.o, build/temp.linux-armv7l-cpython-39/fasta_m10_state.o, build/temp.linux-armv7l-cpython-39/phylip40_state.o, build/temp.linux-armv7l-cpython-39/phylip_paml_state.o, build/temp.linux-armv7l-cpython-39/nexus_state.o, build/temp.linux-armv7l-cpython-39/nexus_m10_state.o, build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o, build/temp.linux-armv7l-cpython-39/phylip32_state.o, build/temp.linux-armv7l-cpython-39/pir_state.o, build/temp.linux-armv7l-cpython-39/mega_sequential_state.o, build/temp.linux-armv7l-cpython-39/fasta_state.o, build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o, build/temp.linux-armv7l-cpython-39/htmlreport_state.o, build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o, build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o, build/temp.linux-armv7l-cpython-39/clustal_state.o, build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o, build/temp.linux-armv7l-cpython-39/utils.o, build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o, build/temp.linux-armv7l-cpython-39/trimalManager.o, build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-10-17T14:09:22,158   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libtrimal.a build/temp.linux-armv7l-cpython-39/Cleaner.o build/temp.linux-armv7l-cpython-39/Alignment.o build/temp.linux-armv7l-cpython-39/sequencesMatrix.o build/temp.linux-armv7l-cpython-39/similarityMatrix.o build/temp.linux-armv7l-cpython-39/Mold.o build/temp.linux-armv7l-cpython-39/Gaps.o build/temp.linux-armv7l-cpython-39/Manager.o build/temp.linux-armv7l-cpython-39/Similarity.o build/temp.linux-armv7l-cpython-39/Consistency.o build/temp.linux-armv7l-cpython-39/errorMessages.o build/temp.linux-armv7l-cpython-39/infoMessages.o build/temp.linux-armv7l-cpython-39/warningMessages.o build/temp.linux-armv7l-cpython-39/fasta_m10_state.o build/temp.linux-armv7l-cpython-39/phylip40_state.o build/temp.linux-armv7l-cpython-39/phylip_paml_state.o build/temp.linux-armv7l-cpython-39/nexus_state.o build/temp.linux-armv7l-cpython-39/nexus_m10_state.o build/temp.linux-armv7l-cpython-39/phylip40_m10_state.o build/temp.linux-armv7l-cpython-39/phylip32_state.o build/temp.linux-armv7l-cpython-39/pir_state.o build/temp.linux-armv7l-cpython-39/mega_sequential_state.o build/temp.linux-armv7l-cpython-39/fasta_state.o build/temp.linux-armv7l-cpython-39/phylip32_m10_state.o build/temp.linux-armv7l-cpython-39/htmlreport_state.o build/temp.linux-armv7l-cpython-39/phylip_paml_m10_state.o build/temp.linux-armv7l-cpython-39/mega_interleaved_state.o build/temp.linux-armv7l-cpython-39/clustal_state.o build/temp.linux-armv7l-cpython-39/BaseFormatHandler.o build/temp.linux-armv7l-cpython-39/utils.o build/temp.linux-armv7l-cpython-39/InternalBenchmarker.o build/temp.linux-armv7l-cpython-39/trimalManager.o build/temp.linux-armv7l-cpython-39/VCFHandler.o
2022-10-17T14:09:22,481   running build_ext
2022-10-17T14:09:22,485   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -mfpu=neon -I/usr/include/python3.9 -c build/temp.linux-armv7l-cpython-39/have_NEON.c -o build/temp.linux-armv7l-cpython-39/have_NEON.o
2022-10-17T14:09:22,909   arm-linux-gnueabihf-gcc -pthread -mfpu=neon build/temp.linux-armv7l-cpython-39/have_NEON.o -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lcpu_features -ltrimal -o build/temp.linux-armv7l-cpython-39/have_NEON
2022-10-17T14:09:23,044   checking whether compiler can build NEON code... yes, with -mfpu=neon
2022-10-17T14:09:27,965   Compiling pytrimal/_trimal.pyx because it changed.
2022-10-17T14:09:27,966   [1/1] Cythonizing pytrimal/_trimal.pyx
2022-10-17T14:09:27,966   building pytrimal._trimal with unix compiler
2022-10-17T14:09:27,966   generating build/temp.linux-armv7l-cpython-39/pytrimal/impl/neon.o from pytrimal/impl/neon.cpp
2022-10-17T14:09:27,966   creating build/temp.linux-armv7l-cpython-39/pytrimal
2022-10-17T14:09:27,967   creating build/temp.linux-armv7l-cpython-39/pytrimal/impl
2022-10-17T14:09:27,968   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -std=c++11 -funroll-loops -mfpu=neon -DCYTHON_WITHOUT_ASSERTIONS=1 -D__ARM_NEON__=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/impl/neon.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/impl/neon.o
2022-10-17T14:09:31,909   building 'pytrimal._trimal' extension
2022-10-17T14:09:31,910   creating build/temp.linux-armv7l-cpython-39/pytrimal/fileobj
2022-10-17T14:09:31,911   creating build/temp.linux-armv7l-cpython-39/pytrimal/patch
2022-10-17T14:09:31,912   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/_trimal.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/_trimal.o -std=c++11 -funroll-loops
2022-10-17T14:10:06,713   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/fileobj/pyreadbuf.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pyreadbuf.o -std=c++11 -funroll-loops
2022-10-17T14:10:07,907   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/fileobj/pyreadintobuf.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pyreadintobuf.o -std=c++11 -funroll-loops
2022-10-17T14:10:09,092   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/fileobj/pywritebuf.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pywritebuf.o -std=c++11 -funroll-loops
2022-10-17T14:10:10,232   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/impl/generic.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/impl/generic.o -std=c++11 -funroll-loops
2022-10-17T14:10:13,743   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -Ipytrimal/patch -Ipytrimal/fileobj -Ipytrimal/impl -Ivendor/cpu_features/include -Ipytrimal -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pytrimal/patch/reportsystem.cpp -o build/temp.linux-armv7l-cpython-39/pytrimal/patch/reportsystem.o -std=c++11 -funroll-loops
2022-10-17T14:10:16,389   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pytrimal/_trimal.o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pyreadbuf.o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pyreadintobuf.o build/temp.linux-armv7l-cpython-39/pytrimal/fileobj/pywritebuf.o build/temp.linux-armv7l-cpython-39/pytrimal/impl/generic.o build/temp.linux-armv7l-cpython-39/pytrimal/patch/reportsystem.o build/temp.linux-armv7l-cpython-39/libcpu_features.a build/temp.linux-armv7l-cpython-39/libtrimal.a build/temp.linux-armv7l-cpython-39/pytrimal/impl/neon.o -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lcpu_features -ltrimal -lcpu_features -ltrimal -o build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so -Wno-alloc-size-larger-than
2022-10-17T14:10:17,614   installing to build/bdist.linux-armv7l/wheel
2022-10-17T14:10:17,614   running install
2022-10-17T14:10:17,641   running install_lib
2022-10-17T14:10:17,660   creating build/bdist.linux-armv7l
2022-10-17T14:10:17,661   creating build/bdist.linux-armv7l/wheel
2022-10-17T14:10:17,663   creating build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,664   copying build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,818   copying build/lib.linux-armv7l-cpython-39/pytrimal/_trimal.pyi -> build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,821   creating build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,822   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_representative_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,825   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/__main__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,828   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_similarity_matrix.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,830   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_automatic_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,832   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_alignment.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,835   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/requirements.txt -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,838   creating build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,839   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.strictplus.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,845   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.maxidentity75.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,850   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.id50.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,852   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/PF12574.full.afa -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,854   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.strict.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,860   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/example.001.gt90.w3.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,862   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,869   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/halorhodopsin.afa -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,875   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/example.001.AA.clw -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,876   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,884   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,886   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.seq40.res60.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,894   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,903   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/pam70.json -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,904   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.automated1.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,911   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.seq80.res80.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,921   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.clusters5.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,923   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,932   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.noduplicateseqs.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,941   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.gappyout.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,948   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.id70.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,951   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/data/ENOG411BWBU.clusters10.fasta -> build/bdist.linux-armv7l/wheel/pytrimal/tests/data
2022-10-17T14:10:17,953   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_overlap_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,955   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_doctest.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,957   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,958   copying build/lib.linux-armv7l-cpython-39/pytrimal/tests/test_manual_trimmer.py -> build/bdist.linux-armv7l/wheel/pytrimal/tests
2022-10-17T14:10:17,960   copying build/lib.linux-armv7l-cpython-39/pytrimal/_version.py -> build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,962   copying build/lib.linux-armv7l-cpython-39/pytrimal/py.typed -> build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,963   copying build/lib.linux-armv7l-cpython-39/pytrimal/__init__.py -> build/bdist.linux-armv7l/wheel/pytrimal
2022-10-17T14:10:17,965   running install_egg_info
2022-10-17T14:10:18,008   running egg_info
2022-10-17T14:10:18,021   writing pytrimal.egg-info/PKG-INFO
2022-10-17T14:10:18,024   writing dependency_links to pytrimal.egg-info/dependency_links.txt
2022-10-17T14:10:18,027   writing top-level names to pytrimal.egg-info/top_level.txt
2022-10-17T14:10:18,063   reading manifest file 'pytrimal.egg-info/SOURCES.txt'
2022-10-17T14:10:18,111   reading manifest template 'MANIFEST.in'
2022-10-17T14:10:18,648   warning: no previously-included files matching '*.html' found under directory 'pytrimal'
2022-10-17T14:10:18,652   warning: no files found matching '*.pxd' under directory 'pytrimal/patch'
2022-10-17T14:10:18,682   adding license file 'COPYING'
2022-10-17T14:10:18,704   writing manifest file 'pytrimal.egg-info/SOURCES.txt'
2022-10-17T14:10:18,706   Copying pytrimal.egg-info to build/bdist.linux-armv7l/wheel/pytrimal-0.5.5-py3.9.egg-info
2022-10-17T14:10:18,718   running install_scripts
2022-10-17T14:10:18,773   adding license file "COPYING" (matched pattern "COPYING*")
2022-10-17T14:10:18,796   creating build/bdist.linux-armv7l/wheel/pytrimal-0.5.5.dist-info/WHEEL
2022-10-17T14:10:18,799   creating '/tmp/pip-wheel-57sbkvfa/tmp07a5r1cm/pytrimal-0.5.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-10-17T14:10:18,802   adding 'pytrimal/__init__.py'
2022-10-17T14:10:20,401   adding 'pytrimal/_trimal.cpython-39-arm-linux-gnueabihf.so'
2022-10-17T14:10:20,457   adding 'pytrimal/_trimal.pyi'
2022-10-17T14:10:20,458   adding 'pytrimal/_version.py'
2022-10-17T14:10:20,459   adding 'pytrimal/py.typed'
2022-10-17T14:10:20,460   adding 'pytrimal/tests/__init__.py'
2022-10-17T14:10:20,461   adding 'pytrimal/tests/__main__.py'
2022-10-17T14:10:20,462   adding 'pytrimal/tests/requirements.txt'
2022-10-17T14:10:20,464   adding 'pytrimal/tests/test_alignment.py'
2022-10-17T14:10:20,466   adding 'pytrimal/tests/test_automatic_trimmer.py'
2022-10-17T14:10:20,467   adding 'pytrimal/tests/test_doctest.py'
2022-10-17T14:10:20,468   adding 'pytrimal/tests/test_manual_trimmer.py'
2022-10-17T14:10:20,470   adding 'pytrimal/tests/test_overlap_trimmer.py'
2022-10-17T14:10:20,471   adding 'pytrimal/tests/test_representative_trimmer.py'
2022-10-17T14:10:20,472   adding 'pytrimal/tests/test_similarity_matrix.py'
2022-10-17T14:10:20,485   adding 'pytrimal/tests/data/ENOG411BWBU.automated1.fasta'
2022-10-17T14:10:20,488   adding 'pytrimal/tests/data/ENOG411BWBU.clusters10.fasta'
2022-10-17T14:10:20,489   adding 'pytrimal/tests/data/ENOG411BWBU.clusters5.fasta'
2022-10-17T14:10:20,501   adding 'pytrimal/tests/data/ENOG411BWBU.cons40.gt40.fasta'
2022-10-17T14:10:20,513   adding 'pytrimal/tests/data/ENOG411BWBU.cons60.gt90.fasta'
2022-10-17T14:10:20,529   adding 'pytrimal/tests/data/ENOG411BWBU.fasta'
2022-10-17T14:10:20,542   adding 'pytrimal/tests/data/ENOG411BWBU.gappyout.fasta'
2022-10-17T14:10:20,545   adding 'pytrimal/tests/data/ENOG411BWBU.id50.fasta'
2022-10-17T14:10:20,551   adding 'pytrimal/tests/data/ENOG411BWBU.id70.fasta'
2022-10-17T14:10:20,558   adding 'pytrimal/tests/data/ENOG411BWBU.maxidentity75.fasta'
2022-10-17T14:10:20,573   adding 'pytrimal/tests/data/ENOG411BWBU.noallgaps.fasta'
2022-10-17T14:10:20,589   adding 'pytrimal/tests/data/ENOG411BWBU.noduplicateseqs.fasta'
2022-10-17T14:10:20,605   adding 'pytrimal/tests/data/ENOG411BWBU.seq40.res60.fasta'
2022-10-17T14:10:20,618   adding 'pytrimal/tests/data/ENOG411BWBU.seq80.res80.fasta'
2022-10-17T14:10:20,628   adding 'pytrimal/tests/data/ENOG411BWBU.strict.fasta'
2022-10-17T14:10:20,637   adding 'pytrimal/tests/data/ENOG411BWBU.strictplus.fasta'
2022-10-17T14:10:20,640   adding 'pytrimal/tests/data/PF12574.full.afa'
2022-10-17T14:10:20,641   adding 'pytrimal/tests/data/__init__.py'
2022-10-17T14:10:20,642   adding 'pytrimal/tests/data/example.001.AA.clw'
2022-10-17T14:10:20,643   adding 'pytrimal/tests/data/example.001.gt90.w3.fasta'
2022-10-17T14:10:20,650   adding 'pytrimal/tests/data/halorhodopsin.afa'
2022-10-17T14:10:20,652   adding 'pytrimal/tests/data/pam70.json'
2022-10-17T14:10:20,659   adding 'pytrimal-0.5.5.dist-info/COPYING'
2022-10-17T14:10:20,661   adding 'pytrimal-0.5.5.dist-info/METADATA'
2022-10-17T14:10:20,662   adding 'pytrimal-0.5.5.dist-info/WHEEL'
2022-10-17T14:10:20,663   adding 'pytrimal-0.5.5.dist-info/top_level.txt'
2022-10-17T14:10:20,664   adding 'pytrimal-0.5.5.dist-info/RECORD'
2022-10-17T14:10:20,709   removing build/bdist.linux-armv7l/wheel
2022-10-17T14:10:21,176   Building wheel for pytrimal (pyproject.toml): finished with status 'done'
2022-10-17T14:10:21,260   Created wheel for pytrimal: filename=pytrimal-0.5.5-cp39-cp39-linux_armv7l.whl size=3445548 sha256=7cb3eeb8a73e979a4a7ba8284c74e59ca8b037430df30a59f03973c5b6f79aae
2022-10-17T14:10:21,261   Stored in directory: /tmp/pip-ephem-wheel-cache-_s8sioua/wheels/05/60/31/d5d938c0b9180a7b0c08d0b0eaf97e74f74e3be82e4343e481
2022-10-17T14:10:21,280 Successfully built pytrimal
2022-10-17T14:10:21,385 Removed build tracker: '/tmp/pip-build-tracker-uzijwn1f'