2022-10-25T21:53:28,572 Created temporary directory: /tmp/pip-ephem-wheel-cache-mgyjm_j6
2022-10-25T21:53:28,574 Created temporary directory: /tmp/pip-build-tracker-i90u6mw9
2022-10-25T21:53:28,575 Initialized build tracking at /tmp/pip-build-tracker-i90u6mw9
2022-10-25T21:53:28,575 Created build tracker: /tmp/pip-build-tracker-i90u6mw9
2022-10-25T21:53:28,575 Entered build tracker: /tmp/pip-build-tracker-i90u6mw9
2022-10-25T21:53:28,575 Created temporary directory: /tmp/pip-wheel-lw1qjb00
2022-10-25T21:53:28,579 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-10-25T21:53:28,581 Created temporary directory: /tmp/pip-ephem-wheel-cache-zqo_3p52
2022-10-25T21:53:28,617 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-25T21:53:28,620 2 location(s) to search for versions of scirpy:
2022-10-25T21:53:28,620 * https://pypi.org/simple/scirpy/
2022-10-25T21:53:28,620 * https://www.piwheels.org/simple/scirpy/
2022-10-25T21:53:28,620 Fetching project page and analyzing links: https://pypi.org/simple/scirpy/
2022-10-25T21:53:28,621 Getting page https://pypi.org/simple/scirpy/
2022-10-25T21:53:28,622 Found index url https://pypi.org/simple
2022-10-25T21:53:28,678 Fetched page https://pypi.org/simple/scirpy/ as application/vnd.pypi.simple.v1+json
2022-10-25T21:53:28,686   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/2b/87/294b2db5a86fc0420d8472a732e49c53edfea03eea6f7244c0d8178c2eef/scirpy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/)
2022-10-25T21:53:28,686   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/c1/0d/55deb716b55bf3fdba97a13b414a6435504b58c2783541e3a648b4ce524b/scirpy-0.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,687   Found link https://files.pythonhosted.org/packages/e4/e7/968694b1e6bef7fabd4f3d51ba8107e8c2531b3269659cd9efb330485006/scirpy-0.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1
2022-10-25T21:53:28,687   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/5d/14/f453797774d231cf8d873cc4017b57202ef6b9e63d88336baadd2cfbef2a/scirpy-0.1.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,688   Found link https://files.pythonhosted.org/packages/6f/98/93df2761c6f2f9db818972b716671e18fb53a54229d2bd4f9ee0093cb1a2/scirpy-0.1.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1.1
2022-10-25T21:53:28,688   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/4e/d3/154dc4b761af9cb84c2847f6845ec5804cdd560fc46ac9dba7d3062fbc70/scirpy-0.1.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,689   Found link https://files.pythonhosted.org/packages/b5/66/35b338b503b03f4402cef50d194df7a2f5dfbf9a6b594f1d64b1382ba1f3/scirpy-0.1.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1.2
2022-10-25T21:53:28,689   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/e4/35/e475df47b99a610357483f8d375dab86ef81b91ae94f5d822360cf843a81/scirpy-0.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,690   Found link https://files.pythonhosted.org/packages/18/75/627553f60af1b1b636e6cbf038cf6ee60575ece206a5e737bcf829f78682/scirpy-0.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.2
2022-10-25T21:53:28,690   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/8e/af/49fd3d1bcc40ba97c5dc3be27e88899101a1f7e368fdcb3c6170a2e0b45e/scirpy-0.3-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,690   Found link https://files.pythonhosted.org/packages/db/07/9027996c75a175c8db97bfc5353eead9d44f50d6f9af62520cb513ba7076/scirpy-0.3.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.3
2022-10-25T21:53:28,691   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/9f/99/2b8a921ef3b793407d56b60651d164a2c1a3560e46cc31362552680c87de/scirpy-0.4-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,691   Found link https://files.pythonhosted.org/packages/b7/5b/94a919bbc3ee1e8a62beb95c79f8c6183113f5946b9e1baa6d5ef5ecb772/scirpy-0.4.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4
2022-10-25T21:53:28,692   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/de/19/df4d8de48fbab8a927bbcff075c4ce209cf59e985b314acb2e0c91c9a76a/scirpy-0.4.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,692   Found link https://files.pythonhosted.org/packages/76/3c/413d60aaf3b1b7e0b6d27c2f9a7edab73bcde8d411848998b4670c7557d8/scirpy-0.4.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4.1
2022-10-25T21:53:28,693   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/8e/2b/37bcb68bb8979f0a0b1748d237d13a93f6d78bf757af31c46321fe7dffec/scirpy-0.4.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,693   Found link https://files.pythonhosted.org/packages/f1/1c/69702260034189b09de8eee0ba214a498f0b253e059140543ca3ca348e7e/scirpy-0.4.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4.2
2022-10-25T21:53:28,693   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/1e/d1/51afe3f1c0dfeaca34e4596dd717df2bc3eca6246c7ec9ccfe8b9213111d/scirpy-0.5.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,694   Found link https://files.pythonhosted.org/packages/9d/73/a8cf8bc4105958641eed539a6c81fe51723c339955ec9fc5ec2242afe4c6/scirpy-0.5.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.5.0
2022-10-25T21:53:28,694   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/84/bb/03425371ced2bb07b125e8d69a86ff92a822d188b37844cec822d290fa5e/scirpy-0.6.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,695   Found link https://files.pythonhosted.org/packages/6b/02/4c9e1ce0b94c678c76913102a3cfd58e238104fd574b4585be8e6c00ba0e/scirpy-0.6.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.6.0
2022-10-25T21:53:28,695   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/83/6c/ca2da9be5c2466530f27f02c6303f679f34acab2231c630c3f040d840ef5/scirpy-0.6.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,695   Found link https://files.pythonhosted.org/packages/84/9e/8b43cdf19c65935c68cc88dda9e16b25dd4876791f179918097f1d24a6e4/scirpy-0.6.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.6.1
2022-10-25T21:53:28,696   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/49/58/f738f345da5ba61baaaeee50030c1a7e054c49d83a348d440e770ba8765f/scirpy-0.7.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,696   Found link https://files.pythonhosted.org/packages/7d/9c/696fa2e8b375102c01438f48bfba391e781b5deac62cafedfed662d974ca/scirpy-0.7.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.7.0
2022-10-25T21:53:28,696   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/bd/6f/cd4ce286c928a4febe63532c2ca1b0ed570f018f9545eb0274dd2a588504/scirpy-0.7.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,697   Found link https://files.pythonhosted.org/packages/23/a7/8d747c84137a1e531297ec6214a266a8e4fcc612fdc733941bed32d817a0/scirpy-0.7.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.7.1
2022-10-25T21:53:28,697   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/22/4b/100ce2a068b154236e9680826ccf88bb044f3ab88abab2d679e6a7d891ca/scirpy-0.8.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,698   Found link https://files.pythonhosted.org/packages/23/0c/a6fea62e0108d0d6da6a95fc66d6294c442adab16e826cfc86c098a94516/scirpy-0.8.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.8.0
2022-10-25T21:53:28,698   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/1b/5f/74307d956743fb0a8b2df31e097c566b41e51e2f5a199d497e59cdc68b1d/scirpy-0.9.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,698   Found link https://files.pythonhosted.org/packages/d9/6e/fe4eb190bc89f54014dd60ff6ea0154bce51a6b57417fd6fe6229a1fefc9/scirpy-0.9.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.9.0
2022-10-25T21:53:28,699   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/05/95/feeb11b123bf186801911ad7a9c6ee4004f6e21c288bf8c032a332ac85c1/scirpy-0.9.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,699   Found link https://files.pythonhosted.org/packages/e2/b8/d088a38f5f3db0901415ede0c2a202e885eaceea78eff8ee68701fa0c1dc/scirpy-0.9.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.9.1
2022-10-25T21:53:28,700   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/80/cb/393c2849475c3a1b49ff533130f18e1d8382ba74591abf0bc27806519c81/scirpy-0.10.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,700   Found link https://files.pythonhosted.org/packages/c9/7f/5df1ca820d517fcf8cce6ec3ca1a569e57ce17e225446b606cab9cb38b8c/scirpy-0.10.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.10.0
2022-10-25T21:53:28,700   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/e0/09/eae7acbff3a8e82722378549ea5fddd07c2711d0aa8b2bf9056bae31c176/scirpy-0.10.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,701   Found link https://files.pythonhosted.org/packages/12/9b/171147b32e198a14c5842216ed08b8eaea20472057366abab2cfe83c3ff1/scirpy-0.10.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.10.1
2022-10-25T21:53:28,701   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/df/99/f9d8a66d824151d3ee0e7bcba9ac87fb40c411506e8e5f5391762e90b8ab/scirpy-0.11.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,702   Found link https://files.pythonhosted.org/packages/c8/57/775aab2598fdce44dc61b229caebaa27c947248e7ba8e94a0efa23864915/scirpy-0.11.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.11.0
2022-10-25T21:53:28,702   Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/6f/80/075a295e0b6c6532da10e46b367a85a56d5d70d85de8b90979dcd6632960/scirpy-0.11.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,702   Found link https://files.pythonhosted.org/packages/a3/b4/2d2703afc91286704d7b9d0f6aea416a2c61ab8ba60521e1bdafc7b19a42/scirpy-0.11.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.11.1
2022-10-25T21:53:28,703 Fetching project page and analyzing links: https://www.piwheels.org/simple/scirpy/
2022-10-25T21:53:28,703 Getting page https://www.piwheels.org/simple/scirpy/
2022-10-25T21:53:28,704 Found index url https://www.piwheels.org/simple
2022-10-25T21:53:28,951 Fetched page https://www.piwheels.org/simple/scirpy/ as text/html
2022-10-25T21:53:28,956   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.7.1-py3-none-any.whl#sha256=69e8dc9dae84cc51d9cb9477f01204b2b1a4c59c77603b5d61c6783377c1ef04 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,956   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.7.0-py3-none-any.whl#sha256=02472c885a3b34de4c2b9efc2c5245c89f0797c5bd1e290e4a13d248b6e48c48 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.7)
2022-10-25T21:53:28,956   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.6.1-py3-none-any.whl#sha256=cbbcc5359458e7356a028fd1df93b29a2ad70b144aaa1e60d0b8c987b838d09a (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,956   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.6.0-py3-none-any.whl#sha256=4159c1d1d2276b4117f1480988e0ed6c0274423f2eb90025b3b57f00a9ba52cb (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,957   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.5.0-py3-none-any.whl#sha256=64fe5acd51fdfc526c91120194c62a550442213d24e211a65413d5248bd59210 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,957   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4.2-py3-none-any.whl#sha256=94b375a1b22af39bb3521f68a7356de4e8a802f2332df1da934a5278bffa1517 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,957   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4.1-py3-none-any.whl#sha256=94277a3c51aaaa08bfab88b21fd94cf17e90dd64b7dfbbf9aba75797086281b1 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,957   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4-py3-none-any.whl#sha256=5f29f02aeffe7e2b896f510b5d10b3acba723fe6737ee8848e4b2437d7299a74 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,957   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.3-py3-none-any.whl#sha256=0dd0b007ff097c3c5dda11f41ed6d6ec5ce58c888e6087660af54baac30da09a (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,958   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.2-py3-none-any.whl#sha256=2e8f0e0c05a18e8de13fe274c1ed0cae0cbdeb36c750990292fc7df6a84d99b2 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,958   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1.2-py3-none-any.whl#sha256=178a9a8d5541e5c985f13182b1efe798a6a23a13698564085b98adc23a44b48b (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,958   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1.1-py3-none-any.whl#sha256=ffb0ff81dc70197eb475e6b10036b2138a63947eb27a654a2669506c75667d27 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,958   Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1-py3-none-any.whl#sha256=e6dcea649c4445ca4da678562bacdf2a747a684ace877dc68d9d64710e70e137 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6)
2022-10-25T21:53:28,959 Skipping link: not a file: https://www.piwheels.org/simple/scirpy/
2022-10-25T21:53:28,959 Skipping link: not a file: https://pypi.org/simple/scirpy/
2022-10-25T21:53:28,981 Given no hashes to check 1 links for project 'scirpy': discarding no candidates
2022-10-25T21:53:28,998 Collecting scirpy==0.11.1
2022-10-25T21:53:29,000   Created temporary directory: /tmp/pip-unpack-3luo9sco
2022-10-25T21:53:29,046   Downloading scirpy-0.11.1.tar.gz (25.6 MB)
2022-10-25T21:53:32,647   Added scirpy==0.11.1 from https://files.pythonhosted.org/packages/a3/b4/2d2703afc91286704d7b9d0f6aea416a2c61ab8ba60521e1bdafc7b19a42/scirpy-0.11.1.tar.gz to build tracker '/tmp/pip-build-tracker-i90u6mw9'
2022-10-25T21:53:32,659   Created temporary directory: /tmp/pip-build-env-jmwqaebc
2022-10-25T21:53:32,666   Installing build dependencies: started
2022-10-25T21:53:32,667   Running command pip subprocess to install build dependencies
2022-10-25T21:53:33,917   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-10-25T21:53:34,300   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-10-25T21:53:34,327   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-25T21:53:34,328   Ignoring importlib_metadata: markers 'python_version < "3.8"' don't match your environment
2022-10-25T21:53:34,693   Collecting flit_core<4,>=2
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2022-10-25T21:53:35,059   Collecting setuptools_scm
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2022-10-25T21:53:35,163   Collecting pytoml
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2022-10-25T21:53:37,473   Collecting typing-extensions
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2022-10-25T21:53:37,790   Collecting pyparsing!=3.0.5,>=2.0.2
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2022-10-25T21:53:39,631   Installing collected packages: pytoml, wheel, typing-extensions, tomli, setuptools, pyparsing, flit_core, packaging, setuptools_scm
2022-10-25T21:53:39,852     Creating /tmp/pip-build-env-jmwqaebc/overlay/bin
2022-10-25T21:53:39,854     changing mode of /tmp/pip-build-env-jmwqaebc/overlay/bin/wheel to 755
2022-10-25T21:53:43,470   Successfully installed flit_core-3.7.1 packaging-21.3 pyparsing-3.0.9 pytoml-0.1.21 setuptools-65.5.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.37.1
2022-10-25T21:53:43,776   Installing build dependencies: finished with status 'done'
2022-10-25T21:53:43,782   Getting requirements to build wheel: started
2022-10-25T21:53:43,783   Running command Getting requirements to build wheel
2022-10-25T21:53:44,107   Getting requirements to build wheel: finished with status 'done'
2022-10-25T21:53:44,315   Installing backend dependencies: started
2022-10-25T21:53:44,316   Running command pip subprocess to install backend dependencies
2022-10-25T21:53:45,573   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-10-25T21:53:45,960   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-10-25T21:53:45,985   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
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2022-10-25T21:53:47,164   Collecting numba>=0.41.0
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2022-10-25T21:53:58,105   Collecting anndata>=0.7.6
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2022-10-25T21:54:16,375   Collecting llvmlite<0.40,>=0.39.0dev0
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2022-10-25T21:54:16,608     Preparing metadata (setup.py): started
2022-10-25T21:54:16,609     Running command python setup.py egg_info
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2022-10-25T21:54:18,411   Collecting natsort
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2022-10-25T21:54:23,668   Collecting Levenshtein==0.20.7
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2022-10-25T21:54:34,380        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.1/1.1 MB 10.1 MB/s eta 0:00:00
2022-10-25T21:54:34,675   Collecting pyparsing>=2.2.1
2022-10-25T21:54:34,696     Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB)
2022-10-25T21:54:35,210   Collecting fonttools>=4.22.0
2022-10-25T21:54:35,225     Downloading https://www.piwheels.org/simple/fonttools/fonttools-4.38.0-cp39-cp39-linux_armv7l.whl (2.4 MB)
2022-10-25T21:54:35,498        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.4/2.4 MB 8.9 MB/s eta 0:00:00
2022-10-25T21:54:35,841   Collecting six>=1.5
2022-10-25T21:54:35,875     Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB)
2022-10-25T21:54:36,397   Collecting pynndescent>=0.5
2022-10-25T21:54:36,417     Downloading https://www.piwheels.org/simple/pynndescent/pynndescent-0.5.7-py3-none-any.whl (56 kB)
2022-10-25T21:54:36,436        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 56.9/56.9 kB 4.5 MB/s eta 0:00:00
2022-10-25T21:54:36,597   Collecting matplotlib
2022-10-25T21:54:36,610     Downloading https://www.piwheels.org/simple/matplotlib/matplotlib-3.6.0-cp39-cp39-linux_armv7l.whl (10.7 MB)
2022-10-25T21:54:37,772        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.7/10.7 MB 9.1 MB/s eta 0:00:00
2022-10-25T21:54:38,152   Collecting stdlib-list
2022-10-25T21:54:38,162     Downloading https://www.piwheels.org/simple/stdlib-list/stdlib_list-0.8.0-py3-none-any.whl (63 kB)
2022-10-25T21:54:38,181        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 63.5/63.5 kB 5.0 MB/s eta 0:00:00
2022-10-25T21:54:39,039   Building wheels for collected packages: llvmlite
2022-10-25T21:54:39,043     Building wheel for llvmlite (setup.py): started
2022-10-25T21:54:39,044     Running command python setup.py bdist_wheel
2022-10-25T21:54:40,083     running bdist_wheel
2022-10-25T21:54:40,111     /usr/bin/python3 /tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py
2022-10-25T21:54:40,299     LLVM version... Traceback (most recent call last):
2022-10-25T21:54:40,301       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 226, in <module>
2022-10-25T21:54:40,302         main()
2022-10-25T21:54:40,304       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 216, in main
2022-10-25T21:54:40,306         main_posix('linux', '.so')
2022-10-25T21:54:40,308       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 135, in main_posix
2022-10-25T21:54:40,310         raise RuntimeError(msg) from None
2022-10-25T21:54:40,312     RuntimeError: Could not find a `llvm-config` binary. There are a number of reasons this could occur, please see: https://llvmlite.readthedocs.io/en/latest/admin-guide/install.html#using-pip for help.
2022-10-25T21:54:40,324     error: command '/usr/bin/python3' failed with exit code 1
2022-10-25T21:54:40,475     error: subprocess-exited-with-error

2022-10-25T21:54:40,475     × python setup.py bdist_wheel did not run successfully.
2022-10-25T21:54:40,475     │ exit code: 1
2022-10-25T21:54:40,475     ╰─> See above for output.

2022-10-25T21:54:40,475     note: This error originates from a subprocess, and is likely not a problem with pip.
2022-10-25T21:54:40,481     full command: /usr/bin/python3 -u -c '
2022-10-25T21:54:40,481     exec(compile('"'"''"'"''"'"'
2022-10-25T21:54:40,481     # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2022-10-25T21:54:40,481     #
2022-10-25T21:54:40,481     # - It imports setuptools before invoking setup.py, to enable projects that directly
2022-10-25T21:54:40,482     #   import from `distutils.core` to work with newer packaging standards.
2022-10-25T21:54:40,482     # - It provides a clear error message when setuptools is not installed.
2022-10-25T21:54:40,482     # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2022-10-25T21:54:40,482     #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2022-10-25T21:54:40,482     #     manifest_maker: standard file '"'"'-c'"'"' not found".
2022-10-25T21:54:40,482     # - It generates a shim setup.py, for handling setup.cfg-only projects.
2022-10-25T21:54:40,482     import os, sys, tokenize

2022-10-25T21:54:40,482     try:
2022-10-25T21:54:40,483         import setuptools
2022-10-25T21:54:40,483     except ImportError as error:
2022-10-25T21:54:40,483         print(
2022-10-25T21:54:40,483             "ERROR: Can not execute `setup.py` since setuptools is not available in "
2022-10-25T21:54:40,483             "the build environment.",
2022-10-25T21:54:40,483             file=sys.stderr,
2022-10-25T21:54:40,483         )
2022-10-25T21:54:40,483         sys.exit(1)

2022-10-25T21:54:40,484     __file__ = %r
2022-10-25T21:54:40,484     sys.argv[0] = __file__

2022-10-25T21:54:40,484     if os.path.exists(__file__):
2022-10-25T21:54:40,484         filename = __file__
2022-10-25T21:54:40,484         with tokenize.open(__file__) as f:
2022-10-25T21:54:40,484             setup_py_code = f.read()
2022-10-25T21:54:40,484     else:
2022-10-25T21:54:40,484         filename = "<auto-generated setuptools caller>"
2022-10-25T21:54:40,485         setup_py_code = "from setuptools import setup; setup()"

2022-10-25T21:54:40,485     exec(compile(setup_py_code, filename, "exec"))
2022-10-25T21:54:40,485     '"'"''"'"''"'"' % ('"'"'/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-3z7yw6qy
2022-10-25T21:54:40,486     cwd: /tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/
2022-10-25T21:54:40,488     Building wheel for llvmlite (setup.py): finished with status 'error'
2022-10-25T21:54:40,489     ERROR: Failed building wheel for llvmlite
2022-10-25T21:54:40,490     Running setup.py clean for llvmlite
2022-10-25T21:54:40,491     Running command python setup.py clean
2022-10-25T21:54:41,474     running clean
2022-10-25T21:54:41,493     'build/lib.linux-armv7l-cpython-39' does not exist -- can't clean it
2022-10-25T21:54:41,495     'build/bdist.linux-armv7l' does not exist -- can't clean it
2022-10-25T21:54:41,496     'build/scripts-3.9' does not exist -- can't clean it
2022-10-25T21:54:41,498     removing '/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/__pycache__' (and everything under it)
2022-10-25T21:54:41,500     removing '/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/llvmlite/__pycache__' (and everything under it)
2022-10-25T21:54:41,624   Failed to build llvmlite
2022-10-25T21:54:44,718   Installing collected packages: texttable, stdlib-list, squarify, pytz, tqdm, threadpoolctl, six, setuptools, session-info, rapidfuzz, pyyaml, pyparsing, pillow, numpy, networkx, natsort, llvmlite, kiwisolver, joblib, igraph, fonttools, cycler, yamlordereddictloader, scipy, python-igraph, python-dateutil, patsy, parasail, packaging, numba, Levenshtein, h5py, contourpy, scikit-learn, python-levenshtein, pandas, matplotlib, statsmodels, seaborn, pynndescent, anndata, airr, adjustText, umap-learn, scanpy
2022-10-25T21:54:46,208     Creating /tmp/pip-build-env-jmwqaebc/normal/bin
2022-10-25T21:54:46,211     changing mode of /tmp/pip-build-env-jmwqaebc/normal/bin/tqdm to 755
2022-10-25T21:54:59,602     changing mode of /tmp/pip-build-env-jmwqaebc/normal/bin/f2py to 755
2022-10-25T21:54:59,604     changing mode of /tmp/pip-build-env-jmwqaebc/normal/bin/f2py3 to 755
2022-10-25T21:54:59,607     changing mode of /tmp/pip-build-env-jmwqaebc/normal/bin/f2py3.9 to 755
2022-10-25T21:55:05,434     changing mode of /tmp/pip-build-env-jmwqaebc/normal/bin/natsort to 755
2022-10-25T21:55:05,444     Running setup.py install for llvmlite: started
2022-10-25T21:55:05,445     Running command Running setup.py install for llvmlite
2022-10-25T21:55:06,440     running install
2022-10-25T21:55:06,463     /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-10-25T21:55:06,464       warnings.warn(
2022-10-25T21:55:06,494     running build
2022-10-25T21:55:06,495     got version from file /tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/llvmlite/_version.py {'version': '0.39.1', 'full': '31f808fa7a5796bb8d4b14e8a9e27c6dd15f2b6c'}
2022-10-25T21:55:06,496     running build_ext
2022-10-25T21:55:06,498     /usr/bin/python3 /tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py
2022-10-25T21:55:06,642     LLVM version... Traceback (most recent call last):
2022-10-25T21:55:06,643       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 226, in <module>
2022-10-25T21:55:06,644         main()
2022-10-25T21:55:06,645       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 216, in main
2022-10-25T21:55:06,646         main_posix('linux', '.so')
2022-10-25T21:55:06,647       File "/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/ffi/build.py", line 135, in main_posix
2022-10-25T21:55:06,648         raise RuntimeError(msg) from None
2022-10-25T21:55:06,650     RuntimeError: Could not find a `llvm-config` binary. There are a number of reasons this could occur, please see: https://llvmlite.readthedocs.io/en/latest/admin-guide/install.html#using-pip for help.
2022-10-25T21:55:06,666     error: command '/usr/bin/python3' failed with exit code 1
2022-10-25T21:55:06,800     error: subprocess-exited-with-error

2022-10-25T21:55:06,800     × Running setup.py install for llvmlite did not run successfully.
2022-10-25T21:55:06,800     │ exit code: 1
2022-10-25T21:55:06,800     ╰─> See above for output.

2022-10-25T21:55:06,801     note: This error originates from a subprocess, and is likely not a problem with pip.
2022-10-25T21:55:06,805     full command: /usr/bin/python3 -u -c '
2022-10-25T21:55:06,805     exec(compile('"'"''"'"''"'"'
2022-10-25T21:55:06,805     # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2022-10-25T21:55:06,805     #
2022-10-25T21:55:06,805     # - It imports setuptools before invoking setup.py, to enable projects that directly
2022-10-25T21:55:06,806     #   import from `distutils.core` to work with newer packaging standards.
2022-10-25T21:55:06,806     # - It provides a clear error message when setuptools is not installed.
2022-10-25T21:55:06,806     # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2022-10-25T21:55:06,806     #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2022-10-25T21:55:06,806     #     manifest_maker: standard file '"'"'-c'"'"' not found".
2022-10-25T21:55:06,806     # - It generates a shim setup.py, for handling setup.cfg-only projects.
2022-10-25T21:55:06,806     import os, sys, tokenize

2022-10-25T21:55:06,806     try:
2022-10-25T21:55:06,807         import setuptools
2022-10-25T21:55:06,807     except ImportError as error:
2022-10-25T21:55:06,807         print(
2022-10-25T21:55:06,807             "ERROR: Can not execute `setup.py` since setuptools is not available in "
2022-10-25T21:55:06,807             "the build environment.",
2022-10-25T21:55:06,807             file=sys.stderr,
2022-10-25T21:55:06,807         )
2022-10-25T21:55:06,808         sys.exit(1)

2022-10-25T21:55:06,808     __file__ = %r
2022-10-25T21:55:06,808     sys.argv[0] = __file__

2022-10-25T21:55:06,808     if os.path.exists(__file__):
2022-10-25T21:55:06,808         filename = __file__
2022-10-25T21:55:06,808         with tokenize.open(__file__) as f:
2022-10-25T21:55:06,809             setup_py_code = f.read()
2022-10-25T21:55:06,809     else:
2022-10-25T21:55:06,809         filename = "<auto-generated setuptools caller>"
2022-10-25T21:55:06,809         setup_py_code = "from setuptools import setup; setup()"

2022-10-25T21:55:06,809     exec(compile(setup_py_code, filename, "exec"))
2022-10-25T21:55:06,809     '"'"''"'"''"'"' % ('"'"'/tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' install --record /tmp/pip-record-fiva494w/install-record.txt --single-version-externally-managed --prefix /tmp/pip-build-env-jmwqaebc/normal --compile --install-headers /tmp/pip-build-env-jmwqaebc/normal/include/python3.9/llvmlite
2022-10-25T21:55:06,809     cwd: /tmp/pip-install-qb_c16sv/llvmlite_ffb36e49809b452f8948fc30f03bbe57/
2022-10-25T21:55:06,810     Running setup.py install for llvmlite: finished with status 'error'
2022-10-25T21:55:06,815   error: legacy-install-failure

2022-10-25T21:55:06,816   × Encountered error while trying to install package.
2022-10-25T21:55:06,816   ╰─> llvmlite

2022-10-25T21:55:06,816   note: This is an issue with the package mentioned above, not pip.
2022-10-25T21:55:06,816   hint: See above for output from the failure.
2022-10-25T21:55:08,004   ERROR: [present-rich] pip subprocess to install backend dependencies exited with 1
2022-10-25T21:55:08,022   [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/__pip-runner__.py install --ignore-installed --no-user --prefix /tmp/pip-build-env-jmwqaebc/normal --no-warn-script-location -v --no-binary scirpy --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'airr>=1.2' 'numba>=0.41.0' scipy 'anndata>=0.7.6' 'adjustText>=0.7' squarify 'parasail != 1.2.1' 'pandas>=1.0' python-levenshtein 'tqdm>=4.44.1' 'scanpy>=1.6.0' 'networkx>=2.5' scikit-learn 'numpy>=1.17.0' python-igraph[/]
2022-10-25T21:55:08,023   [bold magenta]cwd[/]: \[inherit]
2022-10-25T21:55:08,023   Installing backend dependencies: finished with status 'error'
2022-10-25T21:55:08,024 ERROR: [present-rich] pip subprocess to install backend dependencies exited with 1
2022-10-25T21:55:08,030 Exception information:
2022-10-25T21:55:08,030 Traceback (most recent call last):
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper
2022-10-25T21:55:08,030     status = run_func(*args)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper
2022-10-25T21:55:08,030     return func(self, options, args)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 170, in run
2022-10-25T21:55:08,030     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2022-10-25T21:55:08,030     result = self._result = resolver.resolve(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve
2022-10-25T21:55:08,030     state = resolution.resolve(requirements, max_rounds=max_rounds)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve
2022-10-25T21:55:08,030     self._add_to_criteria(self.state.criteria, r, parent=None)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria
2022-10-25T21:55:08,030     if not criterion.candidates:
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__
2022-10-25T21:55:08,030     return bool(self._sequence)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2022-10-25T21:55:08,030     return any(self)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2022-10-25T21:55:08,030     return (c for c in iterator if id(c) not in self._incompatible_ids)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2022-10-25T21:55:08,030     candidate = func()
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2022-10-25T21:55:08,030     self._link_candidate_cache[link] = LinkCandidate(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 297, in __init__
2022-10-25T21:55:08,030     super().__init__(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 162, in __init__
2022-10-25T21:55:08,030     self.dist = self._prepare()
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 231, in _prepare
2022-10-25T21:55:08,030     dist = self._prepare_distribution()
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 308, in _prepare_distribution
2022-10-25T21:55:08,030     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 491, in prepare_linked_requirement
2022-10-25T21:55:08,030     return self._prepare_linked_requirement(req, parallel_builds)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 577, in _prepare_linked_requirement
2022-10-25T21:55:08,030     dist = _get_prepared_distribution(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2022-10-25T21:55:08,030     abstract_dist.prepare_distribution_metadata(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 48, in prepare_distribution_metadata
2022-10-25T21:55:08,030     self._install_build_reqs(finder)
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 122, in _install_build_reqs
2022-10-25T21:55:08,030     self.req.build_env.install_requirements(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/build_env.py", line 216, in install_requirements
2022-10-25T21:55:08,030     self._install_requirements(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/build_env.py", line 274, in _install_requirements
2022-10-25T21:55:08,030     call_subprocess(
2022-10-25T21:55:08,030   File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2022-10-25T21:55:08,030     raise error
2022-10-25T21:55:08,030 pip._internal.exceptions.InstallationSubprocessError: pip subprocess to install backend dependencies exited with 1
2022-10-25T21:55:08,044 Removed scirpy==0.11.1 from https://files.pythonhosted.org/packages/a3/b4/2d2703afc91286704d7b9d0f6aea416a2c61ab8ba60521e1bdafc7b19a42/scirpy-0.11.1.tar.gz from build tracker '/tmp/pip-build-tracker-i90u6mw9'
2022-10-25T21:55:08,044 Removed build tracker: '/tmp/pip-build-tracker-i90u6mw9'