2022-10-28T12:01:03,914 Created temporary directory: /tmp/pip-ephem-wheel-cache-pozysklk
2022-10-28T12:01:03,916 Created temporary directory: /tmp/pip-build-tracker-gfh1gnkb
2022-10-28T12:01:03,916 Initialized build tracking at /tmp/pip-build-tracker-gfh1gnkb
2022-10-28T12:01:03,916 Created build tracker: /tmp/pip-build-tracker-gfh1gnkb
2022-10-28T12:01:03,916 Entered build tracker: /tmp/pip-build-tracker-gfh1gnkb
2022-10-28T12:01:03,917 Created temporary directory: /tmp/pip-wheel-hjsen632
2022-10-28T12:01:03,920 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-10-28T12:01:03,923 Created temporary directory: /tmp/pip-ephem-wheel-cache-s2d7d5wa
2022-10-28T12:01:03,949 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-10-28T12:01:03,952 2 location(s) to search for versions of tf-comb:
2022-10-28T12:01:03,952 * https://pypi.org/simple/tf-comb/
2022-10-28T12:01:03,952 * https://www.piwheels.org/simple/tf-comb/
2022-10-28T12:01:03,952 Fetching project page and analyzing links: https://pypi.org/simple/tf-comb/
2022-10-28T12:01:03,953 Getting page https://pypi.org/simple/tf-comb/
2022-10-28T12:01:03,954 Found index url https://pypi.org/simple
2022-10-28T12:01:04,008 Fetched page https://pypi.org/simple/tf-comb/ as application/vnd.pypi.simple.v1+json
2022-10-28T12:01:04,009   Found link https://files.pythonhosted.org/packages/49/f0/0e6d20e01c9263deca6e3aab61c0171757ce6a03e8fe58f4f1b5bbcfb3f6/TF-COMB-1.0.0.tar.gz (from https://pypi.org/simple/tf-comb/) (requires-python:>=3), version: 1.0.0
2022-10-28T12:01:04,010 Fetching project page and analyzing links: https://www.piwheels.org/simple/tf-comb/
2022-10-28T12:01:04,010 Getting page https://www.piwheels.org/simple/tf-comb/
2022-10-28T12:01:04,011 Found index url https://www.piwheels.org/simple
2022-10-28T12:01:05,042 Fetched page https://www.piwheels.org/simple/tf-comb/ as text/html
2022-10-28T12:01:05,046   Skipping link: No binaries permitted for tf-comb: https://www.piwheels.org/simple/tf-comb/TF_COMB-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=1b5ab430e980ec633b57309315e0af43f8e75f7ca5785099a89e6e9bbb3b171e (from https://www.piwheels.org/simple/tf-comb/) (requires-python:>=3)
2022-10-28T12:01:05,047   Skipping link: No binaries permitted for tf-comb: https://www.piwheels.org/simple/tf-comb/TF_COMB-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=1b5ab430e980ec633b57309315e0af43f8e75f7ca5785099a89e6e9bbb3b171e (from https://www.piwheels.org/simple/tf-comb/) (requires-python:>=3)
2022-10-28T12:01:05,047 Skipping link: not a file: https://www.piwheels.org/simple/tf-comb/
2022-10-28T12:01:05,048 Skipping link: not a file: https://pypi.org/simple/tf-comb/
2022-10-28T12:01:05,087 Given no hashes to check 1 links for project 'tf-comb': discarding no candidates
2022-10-28T12:01:05,111 Collecting tf-comb==1.0.0
2022-10-28T12:01:05,114   Created temporary directory: /tmp/pip-unpack-29s4nfgk
2022-10-28T12:01:05,182   Downloading TF-COMB-1.0.0.tar.gz (2.9 MB)
2022-10-28T12:01:05,889   Added tf-comb==1.0.0 from https://files.pythonhosted.org/packages/49/f0/0e6d20e01c9263deca6e3aab61c0171757ce6a03e8fe58f4f1b5bbcfb3f6/TF-COMB-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-gfh1gnkb'
2022-10-28T12:01:05,891   Running setup.py (path:/tmp/pip-wheel-hjsen632/tf-comb_5994191df2944461ae93f2ba6bdf11a9/setup.py) egg_info for package tf-comb
2022-10-28T12:01:05,891   Created temporary directory: /tmp/pip-pip-egg-info-s8suqwiz
2022-10-28T12:01:05,892   Preparing metadata (setup.py): started
2022-10-28T12:01:05,893   Running command python setup.py egg_info
2022-10-28T12:01:07,341   running egg_info
2022-10-28T12:01:07,344   creating /tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info
2022-10-28T12:01:07,364   writing /tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/PKG-INFO
2022-10-28T12:01:07,367   writing dependency_links to /tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/dependency_links.txt
2022-10-28T12:01:07,369   writing requirements to /tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/requires.txt
2022-10-28T12:01:07,370   writing top-level names to /tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/top_level.txt
2022-10-28T12:01:07,371   writing manifest file '/tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/SOURCES.txt'
2022-10-28T12:01:07,440   reading manifest file '/tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/SOURCES.txt'
2022-10-28T12:01:07,441   reading manifest template 'MANIFEST.in'
2022-10-28T12:01:07,444   warning: no previously-included files found matching 'data/*'
2022-10-28T12:01:07,444   warning: no previously-included files found matching 'examples/*'
2022-10-28T12:01:07,444   adding license file 'LICENSE'
2022-10-28T12:01:07,447   writing manifest file '/tmp/pip-pip-egg-info-s8suqwiz/TF_COMB.egg-info/SOURCES.txt'
2022-10-28T12:01:07,593   Preparing metadata (setup.py): finished with status 'done'
2022-10-28T12:01:07,599   Source in /tmp/pip-wheel-hjsen632/tf-comb_5994191df2944461ae93f2ba6bdf11a9 has version 1.0.0, which satisfies requirement tf-comb==1.0.0 from https://files.pythonhosted.org/packages/49/f0/0e6d20e01c9263deca6e3aab61c0171757ce6a03e8fe58f4f1b5bbcfb3f6/TF-COMB-1.0.0.tar.gz
2022-10-28T12:01:07,600   Removed tf-comb==1.0.0 from https://files.pythonhosted.org/packages/49/f0/0e6d20e01c9263deca6e3aab61c0171757ce6a03e8fe58f4f1b5bbcfb3f6/TF-COMB-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-gfh1gnkb'
2022-10-28T12:01:07,608 Created temporary directory: /tmp/pip-unpack-6m6sprjn
2022-10-28T12:01:07,608 Building wheels for collected packages: tf-comb
2022-10-28T12:01:07,613   Created temporary directory: /tmp/pip-wheel-wq7_c9tj
2022-10-28T12:01:07,613   Building wheel for tf-comb (setup.py): started
2022-10-28T12:01:07,614   Destination directory: /tmp/pip-wheel-wq7_c9tj
2022-10-28T12:01:07,614   Running command python setup.py bdist_wheel
2022-10-28T12:01:09,030   running bdist_wheel
2022-10-28T12:01:09,318   running build
2022-10-28T12:01:09,318   running build_py
2022-10-28T12:01:09,563   creating build
2022-10-28T12:01:09,564   creating build/lib.linux-armv7l-cpython-39
2022-10-28T12:01:09,565   creating build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,566   copying tfcomb/utils.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,571   copying tfcomb/logging.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,573   copying tfcomb/__init__.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,575   copying tfcomb/annotation.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,578   copying tfcomb/plotting.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,582   copying tfcomb/analysis.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,584   copying tfcomb/network.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,588   copying tfcomb/objects.py -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,596   running egg_info
2022-10-28T12:01:09,677   writing TF_COMB.egg-info/PKG-INFO
2022-10-28T12:01:09,680   writing dependency_links to TF_COMB.egg-info/dependency_links.txt
2022-10-28T12:01:09,683   writing requirements to TF_COMB.egg-info/requires.txt
2022-10-28T12:01:09,684   writing top-level names to TF_COMB.egg-info/top_level.txt
2022-10-28T12:01:09,708   reading manifest file 'TF_COMB.egg-info/SOURCES.txt'
2022-10-28T12:01:09,715   reading manifest template 'MANIFEST.in'
2022-10-28T12:01:09,717   warning: no previously-included files found matching 'data/*'
2022-10-28T12:01:09,718   warning: no previously-included files found matching 'examples/*'
2022-10-28T12:01:09,718   adding license file 'LICENSE'
2022-10-28T12:01:09,722   writing manifest file 'TF_COMB.egg-info/SOURCES.txt'
2022-10-28T12:01:09,726   /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'tfcomb.data' as data is deprecated, please list it in `packages`.
2022-10-28T12:01:09,726       !!


2022-10-28T12:01:09,726       ############################
2022-10-28T12:01:09,726       # Package would be ignored #
2022-10-28T12:01:09,727       ############################
2022-10-28T12:01:09,727       Python recognizes 'tfcomb.data' as an importable package,
2022-10-28T12:01:09,727       but it is not listed in the `packages` configuration of setuptools.

2022-10-28T12:01:09,727       'tfcomb.data' has been automatically added to the distribution only
2022-10-28T12:01:09,727       because it may contain data files, but this behavior is likely to change
2022-10-28T12:01:09,727       in future versions of setuptools (and therefore is considered deprecated).

2022-10-28T12:01:09,728       Please make sure that 'tfcomb.data' is included as a package by using
2022-10-28T12:01:09,728       the `packages` configuration field or the proper discovery methods
2022-10-28T12:01:09,728       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-10-28T12:01:09,728       instead of `find_packages(...)`/`find:`).

2022-10-28T12:01:09,728       You can read more about "package discovery" and "data files" on setuptools
2022-10-28T12:01:09,728       documentation page.


2022-10-28T12:01:09,729   !!

2022-10-28T12:01:09,729     check.warn(importable)
2022-10-28T12:01:09,731   copying tfcomb/counting.c -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,744   copying tfcomb/counting.pyx -> build/lib.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,747   creating build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,748   copying tfcomb/data/HOCOMOCOv11_HUMAN.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,753   copying tfcomb/data/JASPAR2020_CORE_vertebrates.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,762   copying tfcomb/data/dmelanogaster_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,801   copying tfcomb/data/drerio_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,823   copying tfcomb/data/hsapiens_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,839   copying tfcomb/data/mmusculus_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,855   copying tfcomb/data/scerevisiae_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,861   copying tfcomb/data/tax_ids.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,863   copying tfcomb/data/xtropicalis_genes.txt -> build/lib.linux-armv7l-cpython-39/tfcomb/data
2022-10-28T12:01:09,879   running build_ext
2022-10-28T12:01:09,945   skipping 'tfcomb/counting.c' Cython extension (up-to-date)
2022-10-28T12:01:09,945   building 'tfcomb.counting' extension
2022-10-28T12:01:09,946   creating build/temp.linux-armv7l-cpython-39
2022-10-28T12:01:09,946   creating build/temp.linux-armv7l-cpython-39/tfcomb
2022-10-28T12:01:09,947   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I. -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c tfcomb/counting.c -o build/temp.linux-armv7l-cpython-39/tfcomb/counting.o
2022-10-28T12:01:10,328   In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948,
2022-10-28T12:01:10,328                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2022-10-28T12:01:10,328                    from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2022-10-28T12:01:10,328                    from tfcomb/counting.c:620:
2022-10-28T12:01:10,329   /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2022-10-28T12:01:10,329      17 | #warning "Using deprecated NumPy API, disable it with " \
2022-10-28T12:01:10,329         |  ^~~~~~~
2022-10-28T12:01:15,956   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/tfcomb/counting.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/tfcomb/counting.cpython-39-arm-linux-gnueabihf.so
2022-10-28T12:01:16,114   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-10-28T12:01:16,114     warnings.warn(
2022-10-28T12:01:16,136   installing to build/bdist.linux-armv7l/wheel
2022-10-28T12:01:16,136   running install
2022-10-28T12:01:16,162   running install_lib
2022-10-28T12:01:16,185   creating build/bdist.linux-armv7l
2022-10-28T12:01:16,185   creating build/bdist.linux-armv7l/wheel
2022-10-28T12:01:16,187   creating build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,188   copying build/lib.linux-armv7l-cpython-39/tfcomb/counting.pyx -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,190   copying build/lib.linux-armv7l-cpython-39/tfcomb/counting.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,199   copying build/lib.linux-armv7l-cpython-39/tfcomb/counting.c -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,210   copying build/lib.linux-armv7l-cpython-39/tfcomb/utils.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,214   copying build/lib.linux-armv7l-cpython-39/tfcomb/logging.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,216   copying build/lib.linux-armv7l-cpython-39/tfcomb/__init__.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,218   copying build/lib.linux-armv7l-cpython-39/tfcomb/annotation.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,221   creating build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,222   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/HOCOMOCOv11_HUMAN.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,227   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/xtropicalis_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,241   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/scerevisiae_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,246   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/JASPAR2020_CORE_vertebrates.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,255   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/hsapiens_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,276   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/tax_ids.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,278   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/dmelanogaster_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,314   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/mmusculus_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,338   copying build/lib.linux-armv7l-cpython-39/tfcomb/data/drerio_genes.txt -> build/bdist.linux-armv7l/wheel/tfcomb/data
2022-10-28T12:01:16,359   copying build/lib.linux-armv7l-cpython-39/tfcomb/plotting.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,362   copying build/lib.linux-armv7l-cpython-39/tfcomb/analysis.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,365   copying build/lib.linux-armv7l-cpython-39/tfcomb/network.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,367   copying build/lib.linux-armv7l-cpython-39/tfcomb/objects.py -> build/bdist.linux-armv7l/wheel/tfcomb
2022-10-28T12:01:16,372   running install_egg_info
2022-10-28T12:01:16,400   Copying TF_COMB.egg-info to build/bdist.linux-armv7l/wheel/TF_COMB-1.0.0-py3.9.egg-info
2022-10-28T12:01:16,414   running install_scripts
2022-10-28T12:01:16,496   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-10-28T12:01:16,501   creating build/bdist.linux-armv7l/wheel/TF_COMB-1.0.0.dist-info/WHEEL
2022-10-28T12:01:16,504   creating '/tmp/pip-wheel-wq7_c9tj/TF_COMB-1.0.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-10-28T12:01:16,507   adding 'tfcomb/__init__.py'
2022-10-28T12:01:16,509   adding 'tfcomb/analysis.py'
2022-10-28T12:01:16,512   adding 'tfcomb/annotation.py'
2022-10-28T12:01:16,545   adding 'tfcomb/counting.c'
2022-10-28T12:01:16,618   adding 'tfcomb/counting.cpython-39-arm-linux-gnueabihf.so'
2022-10-28T12:01:16,622   adding 'tfcomb/counting.pyx'
2022-10-28T12:01:16,623   adding 'tfcomb/logging.py'
2022-10-28T12:01:16,626   adding 'tfcomb/network.py'
2022-10-28T12:01:16,647   adding 'tfcomb/objects.py'
2022-10-28T12:01:16,653   adding 'tfcomb/plotting.py'
2022-10-28T12:01:16,663   adding 'tfcomb/utils.py'
2022-10-28T12:01:16,699   adding 'tfcomb/data/HOCOMOCOv11_HUMAN.txt'
2022-10-28T12:01:16,764   adding 'tfcomb/data/JASPAR2020_CORE_vertebrates.txt'
2022-10-28T12:01:16,879   adding 'tfcomb/data/dmelanogaster_genes.txt'
2022-10-28T12:01:17,022   adding 'tfcomb/data/drerio_genes.txt'
2022-10-28T12:01:17,126   adding 'tfcomb/data/hsapiens_genes.txt'
2022-10-28T12:01:17,224   adding 'tfcomb/data/mmusculus_genes.txt'
2022-10-28T12:01:17,270   adding 'tfcomb/data/scerevisiae_genes.txt'
2022-10-28T12:01:17,272   adding 'tfcomb/data/tax_ids.txt'
2022-10-28T12:01:17,347   adding 'tfcomb/data/xtropicalis_genes.txt'
2022-10-28T12:01:17,351   adding 'TF_COMB-1.0.0.dist-info/LICENSE'
2022-10-28T12:01:17,353   adding 'TF_COMB-1.0.0.dist-info/METADATA'
2022-10-28T12:01:17,353   adding 'TF_COMB-1.0.0.dist-info/WHEEL'
2022-10-28T12:01:17,354   adding 'TF_COMB-1.0.0.dist-info/top_level.txt'
2022-10-28T12:01:17,355   adding 'TF_COMB-1.0.0.dist-info/RECORD'
2022-10-28T12:01:17,379   removing build/bdist.linux-armv7l/wheel
2022-10-28T12:01:17,573   Building wheel for tf-comb (setup.py): finished with status 'done'
2022-10-28T12:01:17,593   Created wheel for tf-comb: filename=TF_COMB-1.0.0-cp39-cp39-linux_armv7l.whl size=1617010 sha256=d55f049f7c212430921021fd961cb7bdeeb82c0133524afb16e44c68e2b3e317
2022-10-28T12:01:17,594   Stored in directory: /tmp/pip-ephem-wheel-cache-s2d7d5wa/wheels/7a/b3/f4/a0bfa59b56c077f9757abeb25ce7ed0897882a92fc5ff893c5
2022-10-28T12:01:17,608 Successfully built tf-comb
2022-10-28T12:01:17,673 Removed build tracker: '/tmp/pip-build-tracker-gfh1gnkb'