2022-10-28T12:49:52,222 Created temporary directory: /tmp/pip-ephem-wheel-cache-btf2pkow 2022-10-28T12:49:52,224 Created temporary directory: /tmp/pip-build-tracker-upuktm7v 2022-10-28T12:49:52,224 Initialized build tracking at /tmp/pip-build-tracker-upuktm7v 2022-10-28T12:49:52,224 Created build tracker: /tmp/pip-build-tracker-upuktm7v 2022-10-28T12:49:52,224 Entered build tracker: /tmp/pip-build-tracker-upuktm7v 2022-10-28T12:49:52,225 Created temporary directory: /tmp/pip-wheel-8d9nw375 2022-10-28T12:49:52,228 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-10-28T12:49:52,231 Created temporary directory: /tmp/pip-ephem-wheel-cache-eoj7ldeh 2022-10-28T12:49:52,253 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-28T12:49:52,257 2 location(s) to search for versions of ukat: 2022-10-28T12:49:52,257 * https://pypi.org/simple/ukat/ 2022-10-28T12:49:52,257 * https://www.piwheels.org/simple/ukat/ 2022-10-28T12:49:52,257 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2022-10-28T12:49:52,257 Getting page https://pypi.org/simple/ukat/ 2022-10-28T12:49:52,259 Found index url https://pypi.org/simple 2022-10-28T12:49:52,311 Fetched page https://pypi.org/simple/ukat/ as application/vnd.pypi.simple.v1+json 2022-10-28T12:49:52,315 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,316 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2022-10-28T12:49:52,317 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,317 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2022-10-28T12:49:52,318 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,318 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2022-10-28T12:49:52,318 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,319 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2022-10-28T12:49:52,319 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,320 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2022-10-28T12:49:52,320 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-10-28T12:49:52,321 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2022-10-28T12:49:52,321 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-10-28T12:49:52,322 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2022-10-28T12:49:52,322 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-10-28T12:49:52,323 Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1 2022-10-28T12:49:52,323 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/be/62/a915276e1511bc65a0dc4180ef170962967e6f972c58a57a64e3ad0474e0/ukat-0.6.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-10-28T12:49:52,324 Found link https://files.pythonhosted.org/packages/ff/2a/19315dfeeebb202d6761e86e70a87752435eefd0b5d642b690629b64f704/ukat-0.6.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.2 2022-10-28T12:49:52,324 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/9c/71/e782f90624fa37a2d6c14a03f8fa69bac8e724c7b0e34b547a4969bc98fb/ukat-0.6.3-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-10-28T12:49:52,325 Found link https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.3 2022-10-28T12:49:52,325 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2022-10-28T12:49:52,325 Getting page https://www.piwheels.org/simple/ukat/ 2022-10-28T12:49:52,326 Found index url https://www.piwheels.org/simple 2022-10-28T12:49:52,528 Fetched page https://www.piwheels.org/simple/ukat/ as text/html 2022-10-28T12:49:52,532 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.2-py3-none-any.whl#sha256=a831cd11993de2b4c1c722e0294a13bb3e6d1da09b5ebe3c300307759d10cf02 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-10-28T12:49:52,532 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.1-py3-none-any.whl#sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-10-28T12:49:52,532 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-10-28T12:49:52,533 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-10-28T12:49:52,533 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,533 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,533 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,533 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,534 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-10-28T12:49:52,534 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2022-10-28T12:49:52,534 Skipping link: not a file: https://pypi.org/simple/ukat/ 2022-10-28T12:49:52,553 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2022-10-28T12:49:52,570 Collecting ukat==0.6.3 2022-10-28T12:49:52,572 Created temporary directory: /tmp/pip-unpack-ybq2gb62 2022-10-28T12:49:52,809 Downloading ukat-0.6.3.tar.gz (71 kB) 2022-10-28T12:49:53,234 Added ukat==0.6.3 from https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz to build tracker '/tmp/pip-build-tracker-upuktm7v' 2022-10-28T12:49:53,237 Running setup.py (path:/tmp/pip-wheel-8d9nw375/ukat_12922693ac6e4491b5e93a521c615773/setup.py) egg_info for package ukat 2022-10-28T12:49:53,238 Created temporary directory: /tmp/pip-pip-egg-info-x1pdzuuj 2022-10-28T12:49:53,238 Preparing metadata (setup.py): started 2022-10-28T12:49:53,239 Running command python setup.py egg_info 2022-10-28T12:49:54,663 running egg_info 2022-10-28T12:49:54,666 creating /tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info 2022-10-28T12:49:54,693 writing /tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/PKG-INFO 2022-10-28T12:49:54,695 writing dependency_links to /tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/dependency_links.txt 2022-10-28T12:49:54,697 writing requirements to /tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/requires.txt 2022-10-28T12:49:54,698 writing top-level names to /tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/top_level.txt 2022-10-28T12:49:54,700 writing manifest file '/tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/SOURCES.txt' 2022-10-28T12:49:54,798 reading manifest file '/tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/SOURCES.txt' 2022-10-28T12:49:54,800 reading manifest template 'MANIFEST.in' 2022-10-28T12:49:54,814 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-10-28T12:49:54,814 no previously-included directories found matching 'doc' 2022-10-28T12:49:54,815 no previously-included directories found matching 'experiments' 2022-10-28T12:49:54,815 adding license file 'LICENSE' 2022-10-28T12:49:54,818 writing manifest file '/tmp/pip-pip-egg-info-x1pdzuuj/ukat.egg-info/SOURCES.txt' 2022-10-28T12:49:54,932 Preparing metadata (setup.py): finished with status 'done' 2022-10-28T12:49:54,939 Source in /tmp/pip-wheel-8d9nw375/ukat_12922693ac6e4491b5e93a521c615773 has version 0.6.3, which satisfies requirement ukat==0.6.3 from https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz 2022-10-28T12:49:54,940 Removed ukat==0.6.3 from https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz from build tracker '/tmp/pip-build-tracker-upuktm7v' 2022-10-28T12:49:54,947 Created temporary directory: /tmp/pip-unpack-ovrh269n 2022-10-28T12:49:54,947 Building wheels for collected packages: ukat 2022-10-28T12:49:54,952 Created temporary directory: /tmp/pip-wheel-lpn54t8d 2022-10-28T12:49:54,953 Building wheel for ukat (setup.py): started 2022-10-28T12:49:54,953 Destination directory: /tmp/pip-wheel-lpn54t8d 2022-10-28T12:49:54,954 Running command python setup.py bdist_wheel 2022-10-28T12:49:56,036 running bdist_wheel 2022-10-28T12:49:56,328 running build 2022-10-28T12:49:56,328 running build_py 2022-10-28T12:49:56,354 creating build 2022-10-28T12:49:56,354 creating build/lib 2022-10-28T12:49:56,355 creating build/lib/ukat 2022-10-28T12:49:56,356 copying ukat/__init__.py -> build/lib/ukat 2022-10-28T12:49:56,359 creating build/lib/ukat/mapping 2022-10-28T12:49:56,360 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,362 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,365 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,367 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,369 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,371 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,373 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2022-10-28T12:49:56,376 creating build/lib/ukat/utils 2022-10-28T12:49:56,377 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2022-10-28T12:49:56,380 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2022-10-28T12:49:56,382 copying ukat/utils/ge.py -> build/lib/ukat/utils 2022-10-28T12:49:56,383 copying ukat/utils/tools.py -> build/lib/ukat/utils 2022-10-28T12:49:56,385 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2022-10-28T12:49:56,388 creating build/lib/ukat/qa 2022-10-28T12:49:56,388 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2022-10-28T12:49:56,390 copying ukat/qa/snr.py -> build/lib/ukat/qa 2022-10-28T12:49:56,393 creating build/lib/ukat/vessels 2022-10-28T12:49:56,394 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2022-10-28T12:49:56,396 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2022-10-28T12:49:56,398 creating build/lib/ukat/segmentation 2022-10-28T12:49:56,399 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2022-10-28T12:49:56,401 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2022-10-28T12:49:56,403 creating build/lib/ukat/data 2022-10-28T12:49:56,404 copying ukat/data/__init__.py -> build/lib/ukat/data 2022-10-28T12:49:56,406 copying ukat/data/fetch.py -> build/lib/ukat/data 2022-10-28T12:49:56,410 creating build/lib/ukat/mapping/tests 2022-10-28T12:49:56,410 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,412 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,414 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,417 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,419 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,422 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,424 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2022-10-28T12:49:56,427 creating build/lib/ukat/utils/tests 2022-10-28T12:49:56,428 copying ukat/utils/tests/test_ge.py -> build/lib/ukat/utils/tests 2022-10-28T12:49:56,430 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2022-10-28T12:49:56,432 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2022-10-28T12:49:56,434 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2022-10-28T12:49:56,436 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2022-10-28T12:49:56,438 creating build/lib/ukat/qa/tests 2022-10-28T12:49:56,439 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2022-10-28T12:49:56,441 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2022-10-28T12:49:56,443 creating build/lib/ukat/vessels/tests 2022-10-28T12:49:56,444 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2022-10-28T12:49:56,446 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2022-10-28T12:49:56,449 creating build/lib/ukat/segmentation/tests 2022-10-28T12:49:56,450 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2022-10-28T12:49:56,452 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2022-10-28T12:49:56,454 creating build/lib/ukat/data/tests 2022-10-28T12:49:56,455 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2022-10-28T12:49:56,457 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2022-10-28T12:49:56,459 running egg_info 2022-10-28T12:49:56,516 writing ukat.egg-info/PKG-INFO 2022-10-28T12:49:56,518 writing dependency_links to ukat.egg-info/dependency_links.txt 2022-10-28T12:49:56,520 writing requirements to ukat.egg-info/requires.txt 2022-10-28T12:49:56,521 writing top-level names to ukat.egg-info/top_level.txt 2022-10-28T12:49:56,553 reading manifest file 'ukat.egg-info/SOURCES.txt' 2022-10-28T12:49:56,556 reading manifest template 'MANIFEST.in' 2022-10-28T12:49:56,580 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-10-28T12:49:56,580 no previously-included directories found matching 'doc' 2022-10-28T12:49:56,580 no previously-included directories found matching 'experiments' 2022-10-28T12:49:56,581 adding license file 'LICENSE' 2022-10-28T12:49:56,584 writing manifest file 'ukat.egg-info/SOURCES.txt' 2022-10-28T12:49:56,587 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ukat.utils.tests.test_data' as data is deprecated, please list it in `packages`. 2022-10-28T12:49:56,588 !! 2022-10-28T12:49:56,588 ############################ 2022-10-28T12:49:56,588 # Package would be ignored # 2022-10-28T12:49:56,588 ############################ 2022-10-28T12:49:56,588 Python recognizes 'ukat.utils.tests.test_data' as an importable package, 2022-10-28T12:49:56,588 but it is not listed in the `packages` configuration of setuptools. 2022-10-28T12:49:56,589 'ukat.utils.tests.test_data' has been automatically added to the distribution only 2022-10-28T12:49:56,589 because it may contain data files, but this behavior is likely to change 2022-10-28T12:49:56,589 in future versions of setuptools (and therefore is considered deprecated). 2022-10-28T12:49:56,589 Please make sure that 'ukat.utils.tests.test_data' is included as a package by using 2022-10-28T12:49:56,589 the `packages` configuration field or the proper discovery methods 2022-10-28T12:49:56,589 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-10-28T12:49:56,590 instead of `find_packages(...)`/`find:`). 2022-10-28T12:49:56,590 You can read more about "package discovery" and "data files" on setuptools 2022-10-28T12:49:56,590 documentation page. 2022-10-28T12:49:56,590 !! 2022-10-28T12:49:56,591 check.warn(importable) 2022-10-28T12:49:56,591 creating build/lib/ukat/utils/tests/test_data 2022-10-28T12:49:56,591 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2022-10-28T12:49:56,592 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2022-10-28T12:49:56,594 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2022-10-28T12:49:56,629 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-10-28T12:49:56,629 warnings.warn( 2022-10-28T12:49:56,656 installing to build/bdist.linux-armv7l/wheel 2022-10-28T12:49:56,656 running install 2022-10-28T12:49:56,682 running install_lib 2022-10-28T12:49:56,710 creating build/bdist.linux-armv7l 2022-10-28T12:49:56,710 creating build/bdist.linux-armv7l/wheel 2022-10-28T12:49:56,711 creating build/bdist.linux-armv7l/wheel/ukat 2022-10-28T12:49:56,712 copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat 2022-10-28T12:49:56,714 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,715 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,716 copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,718 copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,720 copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,723 copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,725 copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,727 copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,730 copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-10-28T12:49:56,732 copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,734 copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,737 copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,739 copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,741 copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,743 copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,745 copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-10-28T12:49:56,749 creating build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,750 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,751 copying build/lib/ukat/utils/tests/test_ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,753 copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,756 copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,758 copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,760 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-10-28T12:49:56,761 copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-10-28T12:49:56,763 copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-10-28T12:49:56,764 copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-10-28T12:49:56,766 copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-10-28T12:49:56,768 copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,770 copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,772 copying build/lib/ukat/utils/ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,774 copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,776 copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-10-28T12:49:56,778 creating build/bdist.linux-armv7l/wheel/ukat/qa 2022-10-28T12:49:56,779 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-10-28T12:49:56,780 copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-10-28T12:49:56,782 copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-10-28T12:49:56,784 copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-10-28T12:49:56,786 copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-10-28T12:49:56,790 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2022-10-28T12:49:56,791 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-10-28T12:49:56,792 copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-10-28T12:49:56,794 copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-10-28T12:49:56,796 copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-10-28T12:49:56,798 copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-10-28T12:49:56,801 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-10-28T12:49:56,802 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-10-28T12:49:56,802 copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-10-28T12:49:56,804 copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-10-28T12:49:56,806 copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-10-28T12:49:56,808 copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-10-28T12:49:56,811 creating build/bdist.linux-armv7l/wheel/ukat/data 2022-10-28T12:49:56,812 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-10-28T12:49:56,813 copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-10-28T12:49:56,815 copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-10-28T12:49:56,817 copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-10-28T12:49:56,819 copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-10-28T12:49:56,821 running install_egg_info 2022-10-28T12:49:56,850 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.6.3-py3.9.egg-info 2022-10-28T12:49:56,860 running install_scripts 2022-10-28T12:49:56,945 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-10-28T12:49:56,950 creating build/bdist.linux-armv7l/wheel/ukat-0.6.3.dist-info/WHEEL 2022-10-28T12:49:56,953 creating '/tmp/pip-wheel-lpn54t8d/ukat-0.6.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-10-28T12:49:56,955 adding 'ukat/__init__.py' 2022-10-28T12:49:56,956 adding 'ukat/data/__init__.py' 2022-10-28T12:49:56,960 adding 'ukat/data/fetch.py' 2022-10-28T12:49:56,962 adding 'ukat/data/tests/__init__.py' 2022-10-28T12:49:56,963 adding 'ukat/data/tests/test_fetch.py' 2022-10-28T12:49:56,965 adding 'ukat/mapping/__init__.py' 2022-10-28T12:49:56,966 adding 'ukat/mapping/b0.py' 2022-10-28T12:49:56,969 adding 'ukat/mapping/diffusion.py' 2022-10-28T12:49:56,970 adding 'ukat/mapping/mtr.py' 2022-10-28T12:49:56,973 adding 'ukat/mapping/t1.py' 2022-10-28T12:49:56,975 adding 'ukat/mapping/t2.py' 2022-10-28T12:49:56,977 adding 'ukat/mapping/t2star.py' 2022-10-28T12:49:56,979 adding 'ukat/mapping/tests/__init__.py' 2022-10-28T12:49:56,980 adding 'ukat/mapping/tests/test_b0.py' 2022-10-28T12:49:56,982 adding 'ukat/mapping/tests/test_diffusion.py' 2022-10-28T12:49:56,983 adding 'ukat/mapping/tests/test_mtr.py' 2022-10-28T12:49:56,985 adding 'ukat/mapping/tests/test_t1.py' 2022-10-28T12:49:56,987 adding 'ukat/mapping/tests/test_t2.py' 2022-10-28T12:49:56,989 adding 'ukat/mapping/tests/test_t2star.py' 2022-10-28T12:49:56,990 adding 'ukat/qa/__init__.py' 2022-10-28T12:49:56,992 adding 'ukat/qa/snr.py' 2022-10-28T12:49:56,994 adding 'ukat/qa/tests/__init__.py' 2022-10-28T12:49:56,995 adding 'ukat/qa/tests/test_snr.py' 2022-10-28T12:49:56,997 adding 'ukat/segmentation/__init__.py' 2022-10-28T12:49:56,998 adding 'ukat/segmentation/whole_kidney.py' 2022-10-28T12:49:57,000 adding 'ukat/segmentation/tests/__init__.py' 2022-10-28T12:49:57,001 adding 'ukat/segmentation/tests/test_whole_kidney.py' 2022-10-28T12:49:57,003 adding 'ukat/utils/__init__.py' 2022-10-28T12:49:57,005 adding 'ukat/utils/arraystats.py' 2022-10-28T12:49:57,006 adding 'ukat/utils/ge.py' 2022-10-28T12:49:57,007 adding 'ukat/utils/siemens.py' 2022-10-28T12:49:57,009 adding 'ukat/utils/tools.py' 2022-10-28T12:49:57,011 adding 'ukat/utils/tests/__init__.py' 2022-10-28T12:49:57,013 adding 'ukat/utils/tests/test_arraystats.py' 2022-10-28T12:49:57,014 adding 'ukat/utils/tests/test_ge.py' 2022-10-28T12:49:57,015 adding 'ukat/utils/tests/test_siemens.py' 2022-10-28T12:49:57,017 adding 'ukat/utils/tests/test_tools.py' 2022-10-28T12:49:57,019 adding 'ukat/utils/tests/test_data/diffusion_scheme.txt' 2022-10-28T12:49:57,020 adding 'ukat/utils/tests/test_data/expected_from_str.dvs' 2022-10-28T12:49:57,021 adding 'ukat/utils/tests/test_data/expected_from_txt.dvs' 2022-10-28T12:49:57,023 adding 'ukat/vessels/__init__.py' 2022-10-28T12:49:57,025 adding 'ukat/vessels/phase_contrast.py' 2022-10-28T12:49:57,026 adding 'ukat/vessels/tests/__init__.py' 2022-10-28T12:49:57,028 adding 'ukat/vessels/tests/test_phase_contrast.py' 2022-10-28T12:49:57,035 adding 'ukat-0.6.3.dist-info/LICENSE' 2022-10-28T12:49:57,037 adding 'ukat-0.6.3.dist-info/METADATA' 2022-10-28T12:49:57,038 adding 'ukat-0.6.3.dist-info/WHEEL' 2022-10-28T12:49:57,039 adding 'ukat-0.6.3.dist-info/top_level.txt' 2022-10-28T12:49:57,040 adding 'ukat-0.6.3.dist-info/RECORD' 2022-10-28T12:49:57,043 removing build/bdist.linux-armv7l/wheel 2022-10-28T12:49:57,203 Building wheel for ukat (setup.py): finished with status 'done' 2022-10-28T12:49:57,207 Created wheel for ukat: filename=ukat-0.6.3-py3-none-any.whl size=88841 sha256=5ddc013291e2d74f3f64a22c888c300cdabbc893b6cf514d4c7bf97df8be14a6 2022-10-28T12:49:57,208 Stored in directory: /tmp/pip-ephem-wheel-cache-eoj7ldeh/wheels/9f/50/38/1cc0a41c6c9bf3c56e53fb0277241eb38fe3285e4f2c61e3dd 2022-10-28T12:49:57,223 Successfully built ukat 2022-10-28T12:49:57,229 Removed build tracker: '/tmp/pip-build-tracker-upuktm7v'