2022-10-31T19:43:16,861 Created temporary directory: /tmp/pip-ephem-wheel-cache-g3tn66qx 2022-10-31T19:43:16,864 Created temporary directory: /tmp/pip-build-tracker-tomw0aos 2022-10-31T19:43:16,864 Initialized build tracking at /tmp/pip-build-tracker-tomw0aos 2022-10-31T19:43:16,864 Created build tracker: /tmp/pip-build-tracker-tomw0aos 2022-10-31T19:43:16,865 Entered build tracker: /tmp/pip-build-tracker-tomw0aos 2022-10-31T19:43:16,865 Created temporary directory: /tmp/pip-wheel-vteewr0b 2022-10-31T19:43:16,868 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-10-31T19:43:16,871 Created temporary directory: /tmp/pip-ephem-wheel-cache-uruaqna8 2022-10-31T19:43:16,899 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-31T19:43:16,902 2 location(s) to search for versions of celltk2: 2022-10-31T19:43:16,902 * https://pypi.org/simple/celltk2/ 2022-10-31T19:43:16,902 * https://www.piwheels.org/simple/celltk2/ 2022-10-31T19:43:16,902 Fetching project page and analyzing links: https://pypi.org/simple/celltk2/ 2022-10-31T19:43:16,903 Getting page https://pypi.org/simple/celltk2/ 2022-10-31T19:43:16,904 Found index url https://pypi.org/simple 2022-10-31T19:43:16,959 Fetched page https://pypi.org/simple/celltk2/ as application/vnd.pypi.simple.v1+json 2022-10-31T19:43:16,963 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/ed/83/9f4882e169f9e3a0e94cb3b113f9d45d7b2c22ae3448fa5906093366a3a1/celltk2-0.4.0a0-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:16,964 Found link https://files.pythonhosted.org/packages/81/99/f32cd7145396be309d76b0159c57e5bf42424efa7c7309920823ce9d07fa/celltk2-0.4.0a0.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8), version: 0.4.0a0 2022-10-31T19:43:16,964 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/96/ef/2fa5812a59f2c7c6f4acb9f3ed5c532dc6b323a51ac15c9365f0fbf5ff5f/celltk2-0.4.0-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:16,965 Found link https://files.pythonhosted.org/packages/22/f4/c83a2ae22ab7676b54df22729ffb2f87896ad3350cceb6c21fcee1393af1/celltk2-0.4.0.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8), version: 0.4.0 2022-10-31T19:43:16,965 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/e2/30/0b53d24c5b9ad695b0b7b0725be4de60dd67419bfddd5f6ce3a708b20f02/celltk2-0.4.1-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:16,966 Found link https://files.pythonhosted.org/packages/78/c7/350c706f5ba707f2b59a1325ee39c108bc3811b971fdab623255ccaa052a/celltk2-0.4.1.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8), version: 0.4.1 2022-10-31T19:43:16,966 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/2c/40/3bb1c0cad1d671567680ac52f4ae01fb685ff632e524e1cb5d4ff168e1a6/celltk2-0.4.2-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:16,966 Found link https://files.pythonhosted.org/packages/e9/f9/04707142add1a66b233fa06478e81e649d8fac5dc0a01cb9ab8f0df8ba98/celltk2-0.4.2.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8), version: 0.4.2 2022-10-31T19:43:16,967 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/00/11/d6df285a0e4bda814f9f76127e0000d25bd221baaf8e3b281f5f4f502d1a/celltk2-0.4.3b0-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:16,967 Found link https://files.pythonhosted.org/packages/83/74/e615088a297ac7b9a7fdcdb15b1955e20b76e6207b11d1064425d4da49ee/celltk2-0.4.3b0.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.8), version: 0.4.3b0 2022-10-31T19:43:16,968 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/30/98/b823b0e81c337f4973421f95d145f13ede1bb6eb5a1a140867877c70d7e8/celltk2-0.4.3b1-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:16,968 Found link https://files.pythonhosted.org/packages/36/16/cc08bd3e28e8081f15227b436e5c24d909256b238587fbb57655a49e4073/celltk2-0.4.3b1.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9), version: 0.4.3b1 2022-10-31T19:43:16,968 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/3e/a1/c1457a1f209a590d5dd0ff16e531ade85f40df2471512c682867ad4a8785/celltk2-0.4.3b2-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:16,969 Found link https://files.pythonhosted.org/packages/09/8e/a790b1c0834a6d296ebf6ab8d81eaebcbe87100baf16f1bea99ef5c45bfa/celltk2-0.4.3b2.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9), version: 0.4.3b2 2022-10-31T19:43:16,969 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/e1/eb/9b74e9a303a21606053a180425d2087957548913513bb89f65941e916f22/celltk2-0.4.3b3-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:16,970 Found link https://files.pythonhosted.org/packages/74/a9/a0584fcd6af8eb2c644aacd1cd097de4ae59ffd1b12bfdf4e6d27e097449/celltk2-0.4.3b3.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9), version: 0.4.3b3 2022-10-31T19:43:16,970 Skipping link: No binaries permitted for celltk2: https://files.pythonhosted.org/packages/24/4d/6d423f440a58130536c5775a619feb486d29e292e848ec314343463f2fec/celltk2-0.4.3-py3-none-any.whl (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:16,971 Found link https://files.pythonhosted.org/packages/39/af/def30df80e1bb73c2b7ddc91d1eed618a37c95b0cddd0939d261e749b470/celltk2-0.4.3.tar.gz (from https://pypi.org/simple/celltk2/) (requires-python:>=3.9), version: 0.4.3 2022-10-31T19:43:16,971 Fetching project page and analyzing links: https://www.piwheels.org/simple/celltk2/ 2022-10-31T19:43:16,971 Getting page https://www.piwheels.org/simple/celltk2/ 2022-10-31T19:43:16,972 Found index url https://www.piwheels.org/simple 2022-10-31T19:43:17,132 Fetched page https://www.piwheels.org/simple/celltk2/ as text/html 2022-10-31T19:43:17,135 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.3b3-py3-none-any.whl#sha256=ee318114552e9f9af444fdd450eaddeaa99316981617e9f2ddc744d440bf55fe (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:17,136 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.3b2-py3-none-any.whl#sha256=f05a0f769130cd5e656e517c4afefcea6c0756f919874ebc09372fc77825b1bc (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:17,136 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.3b1-py3-none-any.whl#sha256=ffb12aab0fe9139f35de206b128929c86cc316f8a2953d2cc0a2eeccece6737c (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.9) 2022-10-31T19:43:17,136 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.3b0-py3-none-any.whl#sha256=e18728024f1e2e27ab04b432baec2c5bcf0a508ed2048f192b4383a3268f1d58 (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:17,136 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.2-py3-none-any.whl#sha256=c173997bd830fa0a97b9e2d2a20c3bc1f072e02a770565b72939c8926a307d8c (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:17,137 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.1-py3-none-any.whl#sha256=fa6b7fd862d4d4b473c7808dd0d80d8ac5096586ad0acfbe989d38f6b0ad0e66 (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:17,137 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.0-py3-none-any.whl#sha256=91b6c76a817162ea6e7f1a80f8a0079d51ac517258120c8e819a35ff3646dc4c (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:17,137 Skipping link: No binaries permitted for celltk2: https://www.piwheels.org/simple/celltk2/celltk2-0.4.0a0-py3-none-any.whl#sha256=103ddfed3505ea4150aded5a67adb295d476eba6c0f924fcc85f91dd98bd53bf (from https://www.piwheels.org/simple/celltk2/) (requires-python:>=3.8) 2022-10-31T19:43:17,137 Skipping link: not a file: https://www.piwheels.org/simple/celltk2/ 2022-10-31T19:43:17,137 Skipping link: not a file: https://pypi.org/simple/celltk2/ 2022-10-31T19:43:17,156 Given no hashes to check 1 links for project 'celltk2': discarding no candidates 2022-10-31T19:43:17,173 Collecting celltk2==0.4.3 2022-10-31T19:43:17,175 Created temporary directory: /tmp/pip-unpack-3n9vg1nb 2022-10-31T19:43:17,499 Downloading celltk2-0.4.3.tar.gz (7.0 MB) 2022-10-31T19:43:18,539 Added celltk2==0.4.3 from https://files.pythonhosted.org/packages/39/af/def30df80e1bb73c2b7ddc91d1eed618a37c95b0cddd0939d261e749b470/celltk2-0.4.3.tar.gz to build tracker '/tmp/pip-build-tracker-tomw0aos' 2022-10-31T19:43:18,543 Created temporary directory: /tmp/pip-build-env-x6tgwpne 2022-10-31T19:43:18,550 Installing build dependencies: started 2022-10-31T19:43:18,551 Running command pip subprocess to install build dependencies 2022-10-31T19:43:19,752 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-10-31T19:43:20,152 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-10-31T19:43:20,177 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-31T19:43:21,802 Collecting setuptools>=42 2022-10-31T19:43:22,002 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.5.0-py3-none-any.whl (1.2 MB) 2022-10-31T19:43:23,970 Installing collected packages: setuptools 2022-10-31T19:43:26,553 Successfully installed setuptools-65.5.0 2022-10-31T19:43:26,823 Installing build dependencies: finished with status 'done' 2022-10-31T19:43:26,829 Getting requirements to build wheel: started 2022-10-31T19:43:26,830 Running command Getting requirements to build wheel 2022-10-31T19:43:27,713 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:27,713 !! 2022-10-31T19:43:27,714 ########################################################################## 2022-10-31T19:43:27,714 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:27,714 ########################################################################## 2022-10-31T19:43:27,714 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:27,715 `dependencies = ['setuptools>=41.2.0', 'tensorflow>=2.7.0,<2.10.0 ; platform_machine != "arm64"', 'tensorflow-macos>=2.7.0,<2.10.0 ; platform_machine == "arm64"', 'numpy>=1.20,<1.23', 'scipy>=1.6.3', 'scikit_learn>=1.0.1', 'scikit_image>=0.19.1', 'matplotlib>=3.4.1', 'plotly>=5.6.0', 'pandas>=1.3.1', 'h5py>=3.6.0', 'imageio>=2.13.0', 'mahotas>=1.4.5,<1.4.13', 'PyYAML>=6.0', 'SimpleITK>=2.1.1', 'tifffile>=2021.11.2', 'colorcet~=3.0.0', 'seaborn~=0.11.2']` 2022-10-31T19:43:27,715 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:27,715 consider this value unless 'dependencies' is listed as `dynamic`. 2022-10-31T19:43:27,715 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:27,716 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:27,716 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:27,716 follow strictly the standard. 2022-10-31T19:43:27,716 To prevent this warning, you can list 'dependencies' under `dynamic` or alternatively 2022-10-31T19:43:27,716 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:27,716 configuration. 2022-10-31T19:43:27,717 !! 2022-10-31T19:43:27,717 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:27,717 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'optional-dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:27,717 !! 2022-10-31T19:43:27,718 ########################################################################## 2022-10-31T19:43:27,718 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:27,718 ########################################################################## 2022-10-31T19:43:27,718 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:27,718 `optional-dependencies = {'test': ['pytest>=7.0', 'ipdb>=0.13'], 'btrack': ['btrack==0.4.2'], 'kit': ['gurobipy>=9.5.0', 'kvxopt~=1.3.0.2']}` 2022-10-31T19:43:27,719 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:27,719 consider this value unless 'optional-dependencies' is listed as `dynamic`. 2022-10-31T19:43:27,719 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:27,719 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:27,720 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:27,720 follow strictly the standard. 2022-10-31T19:43:27,720 To prevent this warning, you can list 'optional-dependencies' under `dynamic` or alternatively 2022-10-31T19:43:27,720 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:27,720 configuration. 2022-10-31T19:43:27,721 !! 2022-10-31T19:43:27,721 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:27,945 running egg_info 2022-10-31T19:43:27,950 writing celltk2.egg-info/PKG-INFO 2022-10-31T19:43:27,952 writing dependency_links to celltk2.egg-info/dependency_links.txt 2022-10-31T19:43:27,955 writing requirements to celltk2.egg-info/requires.txt 2022-10-31T19:43:27,956 writing top-level names to celltk2.egg-info/top_level.txt 2022-10-31T19:43:27,980 reading manifest file 'celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:27,982 adding license file 'LICENSE' 2022-10-31T19:43:27,986 writing manifest file 'celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:28,129 Getting requirements to build wheel: finished with status 'done' 2022-10-31T19:43:28,141 Installing backend dependencies: started 2022-10-31T19:43:28,142 Running command pip subprocess to install backend dependencies 2022-10-31T19:43:29,351 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-10-31T19:43:29,743 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-10-31T19:43:29,768 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-10-31T19:43:30,236 Collecting wheel 2022-10-31T19:43:30,274 Using cached https://www.piwheels.org/simple/wheel/wheel-0.37.1-py2.py3-none-any.whl (35 kB) 2022-10-31T19:43:31,920 Installing collected packages: wheel 2022-10-31T19:43:32,067 Creating /tmp/pip-build-env-x6tgwpne/normal/bin 2022-10-31T19:43:32,069 changing mode of /tmp/pip-build-env-x6tgwpne/normal/bin/wheel to 755 2022-10-31T19:43:32,083 Successfully installed wheel-0.37.1 2022-10-31T19:43:32,309 Installing backend dependencies: finished with status 'done' 2022-10-31T19:43:32,311 Created temporary directory: /tmp/pip-modern-metadata-nqux2bux 2022-10-31T19:43:32,315 Preparing metadata (pyproject.toml): started 2022-10-31T19:43:32,316 Running command Preparing metadata (pyproject.toml) 2022-10-31T19:43:33,178 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:33,179 !! 2022-10-31T19:43:33,179 ########################################################################## 2022-10-31T19:43:33,179 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:33,179 ########################################################################## 2022-10-31T19:43:33,180 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:33,180 `dependencies = ['setuptools>=41.2.0', 'tensorflow>=2.7.0,<2.10.0 ; platform_machine != "arm64"', 'tensorflow-macos>=2.7.0,<2.10.0 ; platform_machine == "arm64"', 'numpy>=1.20,<1.23', 'scipy>=1.6.3', 'scikit_learn>=1.0.1', 'scikit_image>=0.19.1', 'matplotlib>=3.4.1', 'plotly>=5.6.0', 'pandas>=1.3.1', 'h5py>=3.6.0', 'imageio>=2.13.0', 'mahotas>=1.4.5,<1.4.13', 'PyYAML>=6.0', 'SimpleITK>=2.1.1', 'tifffile>=2021.11.2', 'colorcet~=3.0.0', 'seaborn~=0.11.2']` 2022-10-31T19:43:33,180 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:33,180 consider this value unless 'dependencies' is listed as `dynamic`. 2022-10-31T19:43:33,181 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:33,181 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:33,181 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:33,181 follow strictly the standard. 2022-10-31T19:43:33,181 To prevent this warning, you can list 'dependencies' under `dynamic` or alternatively 2022-10-31T19:43:33,181 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:33,182 configuration. 2022-10-31T19:43:33,182 !! 2022-10-31T19:43:33,182 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:33,182 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'optional-dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:33,182 !! 2022-10-31T19:43:33,183 ########################################################################## 2022-10-31T19:43:33,183 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:33,183 ########################################################################## 2022-10-31T19:43:33,183 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:33,184 `optional-dependencies = {'test': ['pytest>=7.0', 'ipdb>=0.13'], 'btrack': ['btrack==0.4.2'], 'kit': ['gurobipy>=9.5.0', 'kvxopt~=1.3.0.2']}` 2022-10-31T19:43:33,184 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:33,184 consider this value unless 'optional-dependencies' is listed as `dynamic`. 2022-10-31T19:43:33,184 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:33,185 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:33,185 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:33,185 follow strictly the standard. 2022-10-31T19:43:33,185 To prevent this warning, you can list 'optional-dependencies' under `dynamic` or alternatively 2022-10-31T19:43:33,185 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:33,185 configuration. 2022-10-31T19:43:33,186 !! 2022-10-31T19:43:33,186 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:33,442 running dist_info 2022-10-31T19:43:33,448 creating /tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info 2022-10-31T19:43:33,452 writing /tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/PKG-INFO 2022-10-31T19:43:33,454 writing dependency_links to /tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/dependency_links.txt 2022-10-31T19:43:33,457 writing requirements to /tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/requires.txt 2022-10-31T19:43:33,458 writing top-level names to /tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/top_level.txt 2022-10-31T19:43:33,459 writing manifest file '/tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:33,478 reading manifest file '/tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:33,482 adding license file 'LICENSE' 2022-10-31T19:43:33,485 writing manifest file '/tmp/pip-modern-metadata-nqux2bux/celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:33,486 creating '/tmp/pip-modern-metadata-nqux2bux/celltk2-0.4.3.dist-info' 2022-10-31T19:43:33,577 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-10-31T19:43:33,728 Preparing metadata (pyproject.toml): finished with status 'done' 2022-10-31T19:43:33,735 Source in /tmp/pip-wheel-vteewr0b/celltk2_87f9137e37624defbd7a58bfef23b401 has version 0.4.3, which satisfies requirement celltk2==0.4.3 from https://files.pythonhosted.org/packages/39/af/def30df80e1bb73c2b7ddc91d1eed618a37c95b0cddd0939d261e749b470/celltk2-0.4.3.tar.gz 2022-10-31T19:43:33,736 Removed celltk2==0.4.3 from https://files.pythonhosted.org/packages/39/af/def30df80e1bb73c2b7ddc91d1eed618a37c95b0cddd0939d261e749b470/celltk2-0.4.3.tar.gz from build tracker '/tmp/pip-build-tracker-tomw0aos' 2022-10-31T19:43:33,743 Created temporary directory: /tmp/pip-unpack-52fkkqpb 2022-10-31T19:43:33,743 Building wheels for collected packages: celltk2 2022-10-31T19:43:33,748 Created temporary directory: /tmp/pip-wheel-vntmmv4t 2022-10-31T19:43:33,749 Destination directory: /tmp/pip-wheel-vntmmv4t 2022-10-31T19:43:33,751 Building wheel for celltk2 (pyproject.toml): started 2022-10-31T19:43:33,752 Running command Building wheel for celltk2 (pyproject.toml) 2022-10-31T19:43:34,569 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:34,569 !! 2022-10-31T19:43:34,570 ########################################################################## 2022-10-31T19:43:34,570 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:34,570 ########################################################################## 2022-10-31T19:43:34,570 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:34,571 `dependencies = ['setuptools>=41.2.0', 'tensorflow>=2.7.0,<2.10.0 ; platform_machine != "arm64"', 'tensorflow-macos>=2.7.0,<2.10.0 ; platform_machine == "arm64"', 'numpy>=1.20,<1.23', 'scipy>=1.6.3', 'scikit_learn>=1.0.1', 'scikit_image>=0.19.1', 'matplotlib>=3.4.1', 'plotly>=5.6.0', 'pandas>=1.3.1', 'h5py>=3.6.0', 'imageio>=2.13.0', 'mahotas>=1.4.5,<1.4.13', 'PyYAML>=6.0', 'SimpleITK>=2.1.1', 'tifffile>=2021.11.2', 'colorcet~=3.0.0', 'seaborn~=0.11.2']` 2022-10-31T19:43:34,571 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:34,571 consider this value unless 'dependencies' is listed as `dynamic`. 2022-10-31T19:43:34,571 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:34,572 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:34,572 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:34,572 follow strictly the standard. 2022-10-31T19:43:34,572 To prevent this warning, you can list 'dependencies' under `dynamic` or alternatively 2022-10-31T19:43:34,572 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:34,572 configuration. 2022-10-31T19:43:34,573 !! 2022-10-31T19:43:34,573 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:34,573 /tmp/pip-build-env-x6tgwpne/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'optional-dependencies' defined outside of `pyproject.toml` would be ignored. 2022-10-31T19:43:34,573 !! 2022-10-31T19:43:34,574 ########################################################################## 2022-10-31T19:43:34,574 # configuration would be ignored/result in error due to `pyproject.toml` # 2022-10-31T19:43:34,574 ########################################################################## 2022-10-31T19:43:34,574 The following seems to be defined outside of `pyproject.toml`: 2022-10-31T19:43:34,575 `optional-dependencies = {'test': ['pytest>=7.0', 'ipdb>=0.13'], 'btrack': ['btrack==0.4.2'], 'kit': ['gurobipy>=9.5.0', 'kvxopt~=1.3.0.2']}` 2022-10-31T19:43:34,575 According to the spec (see the link below), however, setuptools CANNOT 2022-10-31T19:43:34,575 consider this value unless 'optional-dependencies' is listed as `dynamic`. 2022-10-31T19:43:34,575 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2022-10-31T19:43:34,575 For the time being, `setuptools` will still consider the given value (as a 2022-10-31T19:43:34,576 **transitional** measure), but please note that future releases of setuptools will 2022-10-31T19:43:34,576 follow strictly the standard. 2022-10-31T19:43:34,576 To prevent this warning, you can list 'optional-dependencies' under `dynamic` or alternatively 2022-10-31T19:43:34,576 remove the `[project]` table from your file and rely entirely on other means of 2022-10-31T19:43:34,576 configuration. 2022-10-31T19:43:34,577 !! 2022-10-31T19:43:34,577 warnings.warn(msg, _WouldIgnoreField) 2022-10-31T19:43:34,811 running bdist_wheel 2022-10-31T19:43:34,825 running build 2022-10-31T19:43:34,825 running build_py 2022-10-31T19:43:34,830 creating build 2022-10-31T19:43:34,830 creating build/lib 2022-10-31T19:43:34,831 creating build/lib/celltk 2022-10-31T19:43:34,832 creating build/lib/celltk/external 2022-10-31T19:43:34,832 creating build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,834 copying celltk/external/kit_sch_ge/setup.py -> build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,836 copying celltk/external/kit_sch_ge/__init__.py -> build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,838 copying celltk/external/kit_sch_ge/create_synth_segm_data.py -> build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,841 copying celltk/external/kit_sch_ge/config.py -> build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,843 copying celltk/external/kit_sch_ge/run_tracking.py -> build/lib/celltk/external/kit_sch_ge 2022-10-31T19:43:34,845 creating build/lib/celltk/core 2022-10-31T19:43:34,846 copying celltk/core/orchestrator.py -> build/lib/celltk/core 2022-10-31T19:43:34,850 copying celltk/core/pipeline.py -> build/lib/celltk/core 2022-10-31T19:43:34,853 copying celltk/core/operation.py -> build/lib/celltk/core 2022-10-31T19:43:34,856 copying celltk/core/arrays.py -> build/lib/celltk/core 2022-10-31T19:43:34,861 creating build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,862 copying celltk/external/kit_sch_ge/tracker/__init__.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,863 copying celltk/external/kit_sch_ge/tracker/split_objects.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,866 copying celltk/external/kit_sch_ge/tracker/postprocessing.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,870 copying celltk/external/kit_sch_ge/tracker/graph.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,873 copying celltk/external/kit_sch_ge/tracker/flow.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,875 copying celltk/external/kit_sch_ge/tracker/utils.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,877 copying celltk/external/kit_sch_ge/tracker/export.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,880 copying celltk/external/kit_sch_ge/tracker/tracking.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,883 copying celltk/external/kit_sch_ge/tracker/extract_data.py -> build/lib/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:34,886 creating build/lib/celltk/utils 2022-10-31T19:43:34,887 copying celltk/utils/peak_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,890 copying celltk/utils/cli_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,892 copying celltk/utils/slurm_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,895 copying celltk/utils/__init__.py -> build/lib/celltk/utils 2022-10-31T19:43:34,896 copying celltk/utils/log_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,898 copying celltk/utils/_fastkde.py -> build/lib/celltk/utils 2022-10-31T19:43:34,900 copying celltk/utils/filter_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,903 copying celltk/utils/_types.py -> build/lib/celltk/utils 2022-10-31T19:43:34,905 copying celltk/utils/process_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,907 copying celltk/utils/bayes_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,909 copying celltk/utils/file_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,910 copying celltk/utils/kit_sch_ge_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,913 copying celltk/utils/metric_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,915 copying celltk/utils/estimator_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,917 copying celltk/utils/plot_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,923 copying celltk/utils/operation_utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,927 copying celltk/utils/utils.py -> build/lib/celltk/utils 2022-10-31T19:43:34,929 copying celltk/utils/unet_model.py -> build/lib/celltk/utils 2022-10-31T19:43:34,934 copying celltk/track.py -> build/lib/celltk 2022-10-31T19:43:34,937 copying celltk/extract.py -> build/lib/celltk 2022-10-31T19:43:34,939 copying celltk/segment.py -> build/lib/celltk 2022-10-31T19:43:34,943 copying celltk/__init__.py -> build/lib/celltk 2022-10-31T19:43:34,945 copying celltk/evaluate.py -> build/lib/celltk 2022-10-31T19:43:34,947 copying celltk/process.py -> build/lib/celltk 2022-10-31T19:43:34,951 creating build/lib/celltk/external/misic 2022-10-31T19:43:34,952 copying celltk/external/misic/extras.py -> build/lib/celltk/external/misic 2022-10-31T19:43:34,954 copying celltk/external/misic/__init__.py -> build/lib/celltk/external/misic 2022-10-31T19:43:34,956 copying celltk/external/misic/utils.py -> build/lib/celltk/external/misic 2022-10-31T19:43:34,958 copying celltk/external/misic/misic.py -> build/lib/celltk/external/misic 2022-10-31T19:43:34,959 running egg_info 2022-10-31T19:43:34,968 writing celltk2.egg-info/PKG-INFO 2022-10-31T19:43:34,970 writing dependency_links to celltk2.egg-info/dependency_links.txt 2022-10-31T19:43:34,972 writing requirements to celltk2.egg-info/requires.txt 2022-10-31T19:43:34,973 writing top-level names to celltk2.egg-info/top_level.txt 2022-10-31T19:43:34,986 reading manifest file 'celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:34,989 adding license file 'LICENSE' 2022-10-31T19:43:34,993 writing manifest file 'celltk2.egg-info/SOURCES.txt' 2022-10-31T19:43:34,997 copying celltk/external/misic/MiSiCv2.h5 -> build/lib/celltk/external/misic 2022-10-31T19:43:35,176 installing to build/bdist.linux-armv7l/wheel 2022-10-31T19:43:35,177 running install 2022-10-31T19:43:35,202 running install_lib 2022-10-31T19:43:35,207 creating build/bdist.linux-armv7l 2022-10-31T19:43:35,207 creating build/bdist.linux-armv7l/wheel 2022-10-31T19:43:35,209 creating build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,210 copying build/lib/celltk/track.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,213 copying build/lib/celltk/extract.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,216 creating build/bdist.linux-armv7l/wheel/celltk/core 2022-10-31T19:43:35,217 copying build/lib/celltk/core/orchestrator.py -> build/bdist.linux-armv7l/wheel/celltk/core 2022-10-31T19:43:35,220 copying build/lib/celltk/core/pipeline.py -> build/bdist.linux-armv7l/wheel/celltk/core 2022-10-31T19:43:35,223 copying build/lib/celltk/core/operation.py -> build/bdist.linux-armv7l/wheel/celltk/core 2022-10-31T19:43:35,226 copying build/lib/celltk/core/arrays.py -> build/bdist.linux-armv7l/wheel/celltk/core 2022-10-31T19:43:35,230 copying build/lib/celltk/segment.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,233 copying build/lib/celltk/__init__.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,235 creating build/bdist.linux-armv7l/wheel/celltk/external 2022-10-31T19:43:35,236 creating build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,237 copying build/lib/celltk/external/kit_sch_ge/setup.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,239 copying build/lib/celltk/external/kit_sch_ge/__init__.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,241 copying build/lib/celltk/external/kit_sch_ge/create_synth_segm_data.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,244 copying build/lib/celltk/external/kit_sch_ge/config.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,246 creating build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,247 copying build/lib/celltk/external/kit_sch_ge/tracker/__init__.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,249 copying build/lib/celltk/external/kit_sch_ge/tracker/split_objects.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,251 copying build/lib/celltk/external/kit_sch_ge/tracker/postprocessing.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,254 copying build/lib/celltk/external/kit_sch_ge/tracker/graph.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,257 copying build/lib/celltk/external/kit_sch_ge/tracker/flow.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,259 copying build/lib/celltk/external/kit_sch_ge/tracker/utils.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,261 copying build/lib/celltk/external/kit_sch_ge/tracker/export.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,263 copying build/lib/celltk/external/kit_sch_ge/tracker/tracking.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,266 copying build/lib/celltk/external/kit_sch_ge/tracker/extract_data.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge/tracker 2022-10-31T19:43:35,268 copying build/lib/celltk/external/kit_sch_ge/run_tracking.py -> build/bdist.linux-armv7l/wheel/celltk/external/kit_sch_ge 2022-10-31T19:43:35,270 creating build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,271 copying build/lib/celltk/external/misic/extras.py -> build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,273 copying build/lib/celltk/external/misic/__init__.py -> build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,275 copying build/lib/celltk/external/misic/MiSiCv2.h5 -> build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,426 copying build/lib/celltk/external/misic/utils.py -> build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,428 copying build/lib/celltk/external/misic/misic.py -> build/bdist.linux-armv7l/wheel/celltk/external/misic 2022-10-31T19:43:35,431 creating build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,432 copying build/lib/celltk/utils/peak_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,434 copying build/lib/celltk/utils/cli_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,436 copying build/lib/celltk/utils/slurm_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,439 copying build/lib/celltk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,440 copying build/lib/celltk/utils/log_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,442 copying build/lib/celltk/utils/_fastkde.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,445 copying build/lib/celltk/utils/filter_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,447 copying build/lib/celltk/utils/_types.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,448 copying build/lib/celltk/utils/process_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,450 copying build/lib/celltk/utils/bayes_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,452 copying build/lib/celltk/utils/file_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,454 copying build/lib/celltk/utils/kit_sch_ge_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,456 copying build/lib/celltk/utils/metric_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,457 copying build/lib/celltk/utils/estimator_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,460 copying build/lib/celltk/utils/plot_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,465 copying build/lib/celltk/utils/operation_utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,468 copying build/lib/celltk/utils/utils.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,470 copying build/lib/celltk/utils/unet_model.py -> build/bdist.linux-armv7l/wheel/celltk/utils 2022-10-31T19:43:35,473 copying build/lib/celltk/evaluate.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,475 copying build/lib/celltk/process.py -> build/bdist.linux-armv7l/wheel/celltk 2022-10-31T19:43:35,478 running install_egg_info 2022-10-31T19:43:35,482 Copying celltk2.egg-info to build/bdist.linux-armv7l/wheel/celltk2-0.4.3-py3.9.egg-info 2022-10-31T19:43:35,493 running install_scripts 2022-10-31T19:43:35,567 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-10-31T19:43:35,572 creating build/bdist.linux-armv7l/wheel/celltk2-0.4.3.dist-info/WHEEL 2022-10-31T19:43:35,574 creating '/tmp/pip-wheel-vntmmv4t/tmp1x16iyui/celltk2-0.4.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-10-31T19:43:35,577 adding 'celltk/__init__.py' 2022-10-31T19:43:35,578 adding 'celltk/evaluate.py' 2022-10-31T19:43:35,580 adding 'celltk/extract.py' 2022-10-31T19:43:35,584 adding 'celltk/process.py' 2022-10-31T19:43:35,589 adding 'celltk/segment.py' 2022-10-31T19:43:35,593 adding 'celltk/track.py' 2022-10-31T19:43:35,601 adding 'celltk/core/arrays.py' 2022-10-31T19:43:35,606 adding 'celltk/core/operation.py' 2022-10-31T19:43:35,610 adding 'celltk/core/orchestrator.py' 2022-10-31T19:43:35,614 adding 'celltk/core/pipeline.py' 2022-10-31T19:43:35,616 adding 'celltk/external/kit_sch_ge/__init__.py' 2022-10-31T19:43:35,618 adding 'celltk/external/kit_sch_ge/config.py' 2022-10-31T19:43:35,621 adding 'celltk/external/kit_sch_ge/create_synth_segm_data.py' 2022-10-31T19:43:35,622 adding 'celltk/external/kit_sch_ge/run_tracking.py' 2022-10-31T19:43:35,623 adding 'celltk/external/kit_sch_ge/setup.py' 2022-10-31T19:43:35,625 adding 'celltk/external/kit_sch_ge/tracker/__init__.py' 2022-10-31T19:43:35,627 adding 'celltk/external/kit_sch_ge/tracker/export.py' 2022-10-31T19:43:35,628 adding 'celltk/external/kit_sch_ge/tracker/extract_data.py' 2022-10-31T19:43:35,630 adding 'celltk/external/kit_sch_ge/tracker/flow.py' 2022-10-31T19:43:35,635 adding 'celltk/external/kit_sch_ge/tracker/graph.py' 2022-10-31T19:43:35,639 adding 'celltk/external/kit_sch_ge/tracker/postprocessing.py' 2022-10-31T19:43:35,641 adding 'celltk/external/kit_sch_ge/tracker/split_objects.py' 2022-10-31T19:43:35,644 adding 'celltk/external/kit_sch_ge/tracker/tracking.py' 2022-10-31T19:43:35,645 adding 'celltk/external/kit_sch_ge/tracker/utils.py' 2022-10-31T19:43:36,747 adding 'celltk/external/misic/MiSiCv2.h5' 2022-10-31T19:43:36,794 adding 'celltk/external/misic/__init__.py' 2022-10-31T19:43:36,795 adding 'celltk/external/misic/extras.py' 2022-10-31T19:43:36,797 adding 'celltk/external/misic/misic.py' 2022-10-31T19:43:36,798 adding 'celltk/external/misic/utils.py' 2022-10-31T19:43:36,800 adding 'celltk/utils/__init__.py' 2022-10-31T19:43:36,801 adding 'celltk/utils/_fastkde.py' 2022-10-31T19:43:36,803 adding 'celltk/utils/_types.py' 2022-10-31T19:43:36,804 adding 'celltk/utils/bayes_utils.py' 2022-10-31T19:43:36,806 adding 'celltk/utils/cli_utils.py' 2022-10-31T19:43:36,807 adding 'celltk/utils/estimator_utils.py' 2022-10-31T19:43:36,808 adding 'celltk/utils/file_utils.py' 2022-10-31T19:43:36,810 adding 'celltk/utils/filter_utils.py' 2022-10-31T19:43:36,811 adding 'celltk/utils/kit_sch_ge_utils.py' 2022-10-31T19:43:36,813 adding 'celltk/utils/log_utils.py' 2022-10-31T19:43:36,814 adding 'celltk/utils/metric_utils.py' 2022-10-31T19:43:36,818 adding 'celltk/utils/operation_utils.py' 2022-10-31T19:43:36,821 adding 'celltk/utils/peak_utils.py' 2022-10-31T19:43:36,830 adding 'celltk/utils/plot_utils.py' 2022-10-31T19:43:36,832 adding 'celltk/utils/process_utils.py' 2022-10-31T19:43:36,836 adding 'celltk/utils/slurm_utils.py' 2022-10-31T19:43:36,840 adding 'celltk/utils/unet_model.py' 2022-10-31T19:43:36,842 adding 'celltk/utils/utils.py' 2022-10-31T19:43:36,844 adding 'celltk2-0.4.3.dist-info/LICENSE' 2022-10-31T19:43:36,846 adding 'celltk2-0.4.3.dist-info/METADATA' 2022-10-31T19:43:36,847 adding 'celltk2-0.4.3.dist-info/WHEEL' 2022-10-31T19:43:36,848 adding 'celltk2-0.4.3.dist-info/top_level.txt' 2022-10-31T19:43:36,849 adding 'celltk2-0.4.3.dist-info/RECORD' 2022-10-31T19:43:36,951 removing build/bdist.linux-armv7l/wheel 2022-10-31T19:43:37,117 Building wheel for celltk2 (pyproject.toml): finished with status 'done' 2022-10-31T19:43:37,277 Created wheel for celltk2: filename=celltk2-0.4.3-py3-none-any.whl size=6969081 sha256=4f166386108eda9f0a25c012090a4c1866a03ae54a81b2f526e8522108b1012c 2022-10-31T19:43:37,278 Stored in directory: /tmp/pip-ephem-wheel-cache-uruaqna8/wheels/3f/7e/ad/7473fbce9f6d7f4ae0f910a1a673d0aca5951c1e604409fec6 2022-10-31T19:43:37,296 Successfully built celltk2 2022-10-31T19:43:37,503 Removed build tracker: '/tmp/pip-build-tracker-tomw0aos'