2022-11-03T20:18:13,308 Created temporary directory: /tmp/pip-ephem-wheel-cache-idrom66b
2022-11-03T20:18:13,313 Created temporary directory: /tmp/pip-build-tracker-9co_y5ok
2022-11-03T20:18:13,313 Initialized build tracking at /tmp/pip-build-tracker-9co_y5ok
2022-11-03T20:18:13,314 Created build tracker: /tmp/pip-build-tracker-9co_y5ok
2022-11-03T20:18:13,314 Entered build tracker: /tmp/pip-build-tracker-9co_y5ok
2022-11-03T20:18:13,315 Created temporary directory: /tmp/pip-wheel-_ojn5dfu
2022-11-03T20:18:13,323 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-03T20:18:13,328 Created temporary directory: /tmp/pip-ephem-wheel-cache-tnxyvf61
2022-11-03T20:18:13,379 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-03T20:18:13,386 2 location(s) to search for versions of cidc-schemas:
2022-11-03T20:18:13,386 * https://pypi.org/simple/cidc-schemas/
2022-11-03T20:18:13,386 * https://www.piwheels.org/simple/cidc-schemas/
2022-11-03T20:18:13,387 Fetching project page and analyzing links: https://pypi.org/simple/cidc-schemas/
2022-11-03T20:18:13,388 Getting page https://pypi.org/simple/cidc-schemas/
2022-11-03T20:18:13,391 Found index url https://pypi.org/simple
2022-11-03T20:18:13,596 Fetched page https://pypi.org/simple/cidc-schemas/ as application/vnd.pypi.simple.v1+json
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2022-11-03T20:18:13,793   Found link https://files.pythonhosted.org/packages/98/65/b8bf7e1cd409a52e600307edccf30c3024d49c3b6bf9d0cd5dfab9db699a/cidc_schemas-0.1.1.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.1
2022-11-03T20:18:13,795   Found link https://files.pythonhosted.org/packages/fc/bd/29e94033c1d3056d7db0d88eb07c8daae944cf73c54366c2d8b5203fd981/cidc_schemas-0.1.2.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.2
2022-11-03T20:18:13,796   Found link https://files.pythonhosted.org/packages/49/2f/7cdbd999434f01c99b73770bba1e940748aa7b336b710b297b72a21d7b31/cidc_schemas-0.1.3.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.3
2022-11-03T20:18:13,798   Found link https://files.pythonhosted.org/packages/a9/4e/3fdc90870e91f66372edf736c99a4eee5f658b4d7313a9739c361eb5fd29/cidc_schemas-0.1.4.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.4
2022-11-03T20:18:13,799   Found link https://files.pythonhosted.org/packages/91/76/cca8329212159d7615ceabda81c82fe8c89825ebdc600fcc14509b3fda87/cidc_schemas-0.1.5.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.5
2022-11-03T20:18:13,801   Found link https://files.pythonhosted.org/packages/84/40/20db7197714a7f2df717967ebd4c20fac753ca2daa5c1f7e37bff6537497/cidc_schemas-0.1.6.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.1.6
2022-11-03T20:18:13,802   Found link https://files.pythonhosted.org/packages/78/88/3ea348759927e0aad2486cba30d5b98e0427845d61bf06b3e065111630e4/cidc_schemas-0.2.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.2.0
2022-11-03T20:18:13,804   Found link https://files.pythonhosted.org/packages/99/95/2ad0c2fa835367f1cf653af7eaa49718b9e4d2e407390fe9050c9354626e/cidc_schemas-0.2.1.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.2.1
2022-11-03T20:18:13,805   Found link https://files.pythonhosted.org/packages/60/ec/7463445c92f444f9d03ee441b01cfe493af6cbefe5a4f39d068a33b7f9c5/cidc_schemas-0.3.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.3.0
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2022-11-03T20:18:13,808   Found link https://files.pythonhosted.org/packages/de/78/3d2c726f9e2355173721a79acde65c9b5dd02ea1506ea43a015aa3153007/cidc_schemas-0.4.1.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.1
2022-11-03T20:18:13,809   Found link https://files.pythonhosted.org/packages/99/0b/608875081acc7c69f805dac0241b5800108973cdcf1cf28155648f798985/cidc_schemas-0.4.2.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.2
2022-11-03T20:18:13,811   Found link https://files.pythonhosted.org/packages/93/f1/922cb08950900c0eb9382a67160c0f34dab10f1f5511f79a64c1ff0c719a/cidc_schemas-0.4.3.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.3
2022-11-03T20:18:13,812   Found link https://files.pythonhosted.org/packages/7d/94/8f8b396d024ef7fe873da04df3b8aa2aa4bec798dd57c82ea61ed8332d1e/cidc_schemas-0.4.4.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.4
2022-11-03T20:18:13,814   Found link https://files.pythonhosted.org/packages/c6/b8/e54191f855afdef5d0835146b6a0f8b98df481bab9dcf9b6c6e7815e792f/cidc_schemas-0.4.5.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.5
2022-11-03T20:18:13,815   Found link https://files.pythonhosted.org/packages/ec/11/bfefca572ef82f9bdca65802d4b596a759bb693811da966e948b47a73bb8/cidc_schemas-0.4.6.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.6
2022-11-03T20:18:13,816   Found link https://files.pythonhosted.org/packages/41/08/98a1c5c971f91ba2101a9182d8df8d37784ec786e99d6694a6c4ce202e4a/cidc_schemas-0.4.7.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.7
2022-11-03T20:18:13,818   Found link https://files.pythonhosted.org/packages/dd/7c/a3236fb09e9aaec960d14b2fd5cc9b91c038434c29a864f6e2e67baa50df/cidc_schemas-0.4.8.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.8
2022-11-03T20:18:13,819   Found link https://files.pythonhosted.org/packages/59/ad/0d336b1cf4f805e7046392533327b64659e757df9d1a8295039de2620a98/cidc_schemas-0.4.9.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.9
2022-11-03T20:18:13,821   Found link https://files.pythonhosted.org/packages/ac/d3/c4afd35748908ba50230320146e6c7a6f107b52b733391134079f9583c78/cidc_schemas-0.4.10.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.10
2022-11-03T20:18:13,822   Found link https://files.pythonhosted.org/packages/33/ef/5b11d5e2befd3420af3b866cf46b55948f4261f564f5ccc8bdb204da1a24/cidc_schemas-0.4.11.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.11
2022-11-03T20:18:13,823   Found link https://files.pythonhosted.org/packages/a8/95/e391241e5018d490abcf581c57358b85a79f14e43542de1ee031b518fa07/cidc_schemas-0.4.12.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.12
2022-11-03T20:18:13,825   Found link https://files.pythonhosted.org/packages/72/63/7a29414ea535efd0564e53cd717439bd4af98229db13a9cd9750d627b213/cidc_schemas-0.4.13.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.13
2022-11-03T20:18:13,826   Found link https://files.pythonhosted.org/packages/22/c9/b203bbd7aec1e53ba375ec797d438c0494c845e13151c3cb24619287e276/cidc_schemas-0.4.14.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.14
2022-11-03T20:18:13,828   Found link https://files.pythonhosted.org/packages/b0/b2/fb14706f88db0a91736aab7544bb89575fbb865acc9fc880419858da5b2a/cidc_schemas-0.4.15.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.4.15
2022-11-03T20:18:13,829   Found link https://files.pythonhosted.org/packages/1a/eb/e8d59e7ec9c765b461c58b0860e6046e08cca0c170b245b5dd0b89a2f267/cidc_schemas-0.5.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.5.0
2022-11-03T20:18:13,830   Found link https://files.pythonhosted.org/packages/ca/b6/d2a06f5ca5a647a01ccc40fdf9af3bf02f4f55f6e68654c9df917e513a2c/cidc_schemas-0.6.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.6.0
2022-11-03T20:18:13,832   Found link https://files.pythonhosted.org/packages/37/39/8c1c658c2f22ac25c797fe741886e0826081aac1e84b2389090c8d50ece7/cidc_schemas-0.6.1.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.6.1
2022-11-03T20:18:13,833   Found link https://files.pythonhosted.org/packages/2f/7f/458e758cdc4620a47b444ebfdf4cef968483293bfc656709dab0904c28af/cidc_schemas-0.6.2.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.6.2
2022-11-03T20:18:13,835   Found link https://files.pythonhosted.org/packages/49/05/309c466c198106a167c1647e687ed24935c0d9afe4275ae24228038c7108/cidc_schemas-0.7.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.7.0
2022-11-03T20:18:13,836   Found link https://files.pythonhosted.org/packages/08/6f/853c758a314c9c6d44d88e8550d25db5bda11fa7fbe2f19446ee57e5cb30/cidc_schemas-0.7.1.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.7.1
2022-11-03T20:18:13,837   Found link https://files.pythonhosted.org/packages/83/c7/c03456c129d4b31d200246d3c56a6a4c7b275b02119896583a991b7a7d12/cidc_schemas-0.7.2.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.7.2
2022-11-03T20:18:13,839   Found link https://files.pythonhosted.org/packages/31/fa/8b6fd25a9f14201da76224e21bb3ffae5002b13264a5d49c44f3b8740040/cidc_schemas-0.7.3.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.7.3
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2022-11-03T20:18:13,843   Found link https://files.pythonhosted.org/packages/bb/03/7f1981fe3e7ed40a78035458518053e425b9bf49e524b24c34ca075ab2f3/cidc_schemas-0.8.2.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.8.2
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2022-11-03T20:18:13,853   Found link https://files.pythonhosted.org/packages/57/81/f03d13ed3c45815060cd371712a57f6aa1e88114a1554567984a6b361ded/cidc_schemas-0.9.4.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.9.4
2022-11-03T20:18:13,854   Found link https://files.pythonhosted.org/packages/a0/ea/b395b40dbe2b0627434dc94ca032989cc48260a3605223e5267939599789/cidc_schemas-0.9.5.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.9.5
2022-11-03T20:18:13,856   Found link https://files.pythonhosted.org/packages/6b/bd/b7ae711204662470c1da696a168de2b90ab78eccfa686435c8a014746ab5/cidc_schemas-0.10.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.10.0
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2022-11-03T20:18:13,861   Found link https://files.pythonhosted.org/packages/cf/2d/adbfde9decc69b85f9e15ec4833f77027a3a79a8c96bec3e460c8114b360/cidc_schemas-0.11.0.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.11.0
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2022-11-03T20:18:13,867   Found link https://files.pythonhosted.org/packages/f9/e0/949c929420639d3fd55d1e817d3b0efe70170885efd9d1e7b89eed9a0c1e/cidc_schemas-0.12.4.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.12.4
2022-11-03T20:18:13,869   Found link https://files.pythonhosted.org/packages/7e/28/543f91641aea70f385b20273da2f6f000437fd45da60f60b0928b621762e/cidc_schemas-0.12.5.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.12.5
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2022-11-03T20:18:13,890   Found link https://files.pythonhosted.org/packages/71/78/e46ad7d9f786b8cb350c975bd0d3d5a8c4cfec252e7d67cd3338c2f9a053/cidc_schemas-0.14.5.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.14.5
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2022-11-03T20:18:13,921   Found link https://files.pythonhosted.org/packages/7f/2d/eae4436a350a50927e6a70690ff3a4d30f64b2a8cc0d4817919d67f22aa6/cidc_schemas-0.16.8.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.16.8
2022-11-03T20:18:13,922   Found link https://files.pythonhosted.org/packages/40/de/c18bd849807876bc8dca13a76068bd48d8aaba8de022b86676a957288134/cidc_schemas-0.16.9.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.16.9
2022-11-03T20:18:13,924   Found link https://files.pythonhosted.org/packages/06/c0/00269d20ad1b00fa6d668da19f930fe2e438f0325a4475ec6476fb1217e6/cidc_schemas-0.16.10.tar.gz (from https://pypi.org/simple/cidc-schemas/) (requires-python:>=3.6), version: 0.16.10
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2022-11-03T20:18:14,847   Skipping link: No binaries permitted for cidc-schemas: https://www.piwheels.org/simple/cidc-schemas/cidc_schemas-0.1.1-py2.py3-none-any.whl#sha256=7ab569fe207cd060cd2c1a14bbab800d6c2103643ddf1ed41b3ab0ce683e9526 (from https://www.piwheels.org/simple/cidc-schemas/) (requires-python:>=3.6)
2022-11-03T20:18:14,847 Skipping link: not a file: https://www.piwheels.org/simple/cidc-schemas/
2022-11-03T20:18:14,848 Skipping link: not a file: https://pypi.org/simple/cidc-schemas/
2022-11-03T20:18:14,985 Given no hashes to check 1 links for project 'cidc-schemas': discarding no candidates
2022-11-03T20:18:15,019 Collecting cidc-schemas==0.26.9
2022-11-03T20:18:15,024   Created temporary directory: /tmp/pip-unpack-2nk08xut
2022-11-03T20:18:15,270   Downloading cidc_schemas-0.26.9.tar.gz (296 kB)
2022-11-03T20:18:16,283   Added cidc-schemas==0.26.9 from https://files.pythonhosted.org/packages/48/3f/d2336d73e16b7a9822abc5d0466bff946cb4fac6d8420e51e204c00723e9/cidc_schemas-0.26.9.tar.gz to build tracker '/tmp/pip-build-tracker-9co_y5ok'
2022-11-03T20:18:16,285   Running setup.py (path:/tmp/pip-wheel-_ojn5dfu/cidc-schemas_31ee9379829b4782bb2e39080128973e/setup.py) egg_info for package cidc-schemas
2022-11-03T20:18:16,287   Created temporary directory: /tmp/pip-pip-egg-info-iux0o1ta
2022-11-03T20:18:16,287   Preparing metadata (setup.py): started
2022-11-03T20:18:16,289   Running command python setup.py egg_info
2022-11-03T20:18:18,856   running egg_info
2022-11-03T20:18:18,861   creating /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info
2022-11-03T20:18:18,914   writing /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/PKG-INFO
2022-11-03T20:18:18,920   writing dependency_links to /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/dependency_links.txt
2022-11-03T20:18:18,923   writing entry points to /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/entry_points.txt
2022-11-03T20:18:18,926   writing requirements to /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/requires.txt
2022-11-03T20:18:18,928   writing top-level names to /tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/top_level.txt
2022-11-03T20:18:18,931   writing manifest file '/tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/SOURCES.txt'
2022-11-03T20:18:19,104   reading manifest file '/tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/SOURCES.txt'
2022-11-03T20:18:19,107   reading manifest template 'MANIFEST.in'
2022-11-03T20:18:19,205   warning: no previously-included files matching '__pycache__' found under directory '*'
2022-11-03T20:18:19,208   warning: no previously-included files matching '*.py[co]' found under directory '*'
2022-11-03T20:18:19,209   warning: no files found matching '*.rst' under directory 'docs'
2022-11-03T20:18:19,209   warning: no files found matching 'conf.py' under directory 'docs'
2022-11-03T20:18:19,209   warning: no files found matching 'Makefile' under directory 'docs'
2022-11-03T20:18:19,210   warning: no files found matching 'make.bat' under directory 'docs'
2022-11-03T20:18:19,210   warning: no files found matching '*.jpg' under directory 'docs'
2022-11-03T20:18:19,210   warning: no files found matching '*.png' under directory 'docs'
2022-11-03T20:18:19,211   warning: no files found matching '*.gif' under directory 'docs'
2022-11-03T20:18:19,211   adding license file 'LICENSE'
2022-11-03T20:18:19,211   adding license file 'AUTHORS.rst'
2022-11-03T20:18:19,235   writing manifest file '/tmp/pip-pip-egg-info-iux0o1ta/cidc_schemas.egg-info/SOURCES.txt'
2022-11-03T20:18:19,441   Preparing metadata (setup.py): finished with status 'done'
2022-11-03T20:18:19,455   Source in /tmp/pip-wheel-_ojn5dfu/cidc-schemas_31ee9379829b4782bb2e39080128973e has version 0.26.9, which satisfies requirement cidc-schemas==0.26.9 from https://files.pythonhosted.org/packages/48/3f/d2336d73e16b7a9822abc5d0466bff946cb4fac6d8420e51e204c00723e9/cidc_schemas-0.26.9.tar.gz
2022-11-03T20:18:19,457   Removed cidc-schemas==0.26.9 from https://files.pythonhosted.org/packages/48/3f/d2336d73e16b7a9822abc5d0466bff946cb4fac6d8420e51e204c00723e9/cidc_schemas-0.26.9.tar.gz from build tracker '/tmp/pip-build-tracker-9co_y5ok'
2022-11-03T20:18:19,473 Created temporary directory: /tmp/pip-unpack-rew9m5p0
2022-11-03T20:18:19,474 Building wheels for collected packages: cidc-schemas
2022-11-03T20:18:19,483   Created temporary directory: /tmp/pip-wheel-za5419zn
2022-11-03T20:18:19,484   Building wheel for cidc-schemas (setup.py): started
2022-11-03T20:18:19,486   Destination directory: /tmp/pip-wheel-za5419zn
2022-11-03T20:18:19,486   Running command python setup.py bdist_wheel
2022-11-03T20:18:22,052   running bdist_wheel
2022-11-03T20:18:22,752   running build
2022-11-03T20:18:22,752   running build_py
2022-11-03T20:18:22,814   creating build
2022-11-03T20:18:22,815   creating build/lib
2022-11-03T20:18:22,816   creating build/lib/cidc_schemas
2022-11-03T20:18:22,818   copying cidc_schemas/json_validation.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,824   copying cidc_schemas/util.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,827   copying cidc_schemas/__init__.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,830   copying cidc_schemas/template_writer.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,835   copying cidc_schemas/template.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,842   copying cidc_schemas/cli.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,846   copying cidc_schemas/unprism.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,851   copying cidc_schemas/constants.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,854   copying cidc_schemas/template_reader.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,859   copying cidc_schemas/migrations.py -> build/lib/cidc_schemas
2022-11-03T20:18:22,865   creating build/lib/cidc_schemas/prism
2022-11-03T20:18:22,867   copying cidc_schemas/prism/merger.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,872   copying cidc_schemas/prism/__init__.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,875   copying cidc_schemas/prism/core.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,880   copying cidc_schemas/prism/extra_metadata.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,885   copying cidc_schemas/prism/constants.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,889   copying cidc_schemas/prism/pipelines.py -> build/lib/cidc_schemas/prism
2022-11-03T20:18:22,894   running egg_info
2022-11-03T20:18:23,075   writing cidc_schemas.egg-info/PKG-INFO
2022-11-03T20:18:23,080   writing dependency_links to cidc_schemas.egg-info/dependency_links.txt
2022-11-03T20:18:23,084   writing entry points to cidc_schemas.egg-info/entry_points.txt
2022-11-03T20:18:23,087   writing requirements to cidc_schemas.egg-info/requires.txt
2022-11-03T20:18:23,089   writing top-level names to cidc_schemas.egg-info/top_level.txt
2022-11-03T20:18:23,152   reading manifest file 'cidc_schemas.egg-info/SOURCES.txt'
2022-11-03T20:18:23,180   reading manifest template 'MANIFEST.in'
2022-11-03T20:18:23,279   warning: no previously-included files matching '__pycache__' found under directory '*'
2022-11-03T20:18:23,282   warning: no previously-included files matching '*.py[co]' found under directory '*'
2022-11-03T20:18:23,283   warning: no files found matching '*.rst' under directory 'docs'
2022-11-03T20:18:23,283   warning: no files found matching 'conf.py' under directory 'docs'
2022-11-03T20:18:23,284   warning: no files found matching 'Makefile' under directory 'docs'
2022-11-03T20:18:23,284   warning: no files found matching 'make.bat' under directory 'docs'
2022-11-03T20:18:23,284   warning: no files found matching '*.jpg' under directory 'docs'
2022-11-03T20:18:23,285   warning: no files found matching '*.png' under directory 'docs'
2022-11-03T20:18:23,285   warning: no files found matching '*.gif' under directory 'docs'
2022-11-03T20:18:23,285   adding license file 'LICENSE'
2022-11-03T20:18:23,286   adding license file 'AUTHORS.rst'
2022-11-03T20:18:23,324   writing manifest file 'cidc_schemas.egg-info/SOURCES.txt'
2022-11-03T20:18:23,330   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.metaschema' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,331       !!


2022-11-03T20:18:23,332       ############################
2022-11-03T20:18:23,332       # Package would be ignored #
2022-11-03T20:18:23,332       ############################
2022-11-03T20:18:23,332       Python recognizes 'cidc_schemas.metaschema' as an importable package,
2022-11-03T20:18:23,333       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,333       'cidc_schemas.metaschema' has been automatically added to the distribution only
2022-11-03T20:18:23,334       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,334       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,334       Please make sure that 'cidc_schemas.metaschema' is included as a package by using
2022-11-03T20:18:23,335       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,335       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,335       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,336       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,336       documentation page.


2022-11-03T20:18:23,337   !!

2022-11-03T20:18:23,337     check.warn(importable)
2022-11-03T20:18:23,341   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.pipeline_configs' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,342       !!


2022-11-03T20:18:23,343       ############################
2022-11-03T20:18:23,343       # Package would be ignored #
2022-11-03T20:18:23,344       ############################
2022-11-03T20:18:23,344       Python recognizes 'cidc_schemas.pipeline_configs' as an importable package,
2022-11-03T20:18:23,344       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,345       'cidc_schemas.pipeline_configs' has been automatically added to the distribution only
2022-11-03T20:18:23,346       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,346       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,347       Please make sure that 'cidc_schemas.pipeline_configs' is included as a package by using
2022-11-03T20:18:23,347       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,348       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,348       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,349       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,350       documentation page.


2022-11-03T20:18:23,351   !!

2022-11-03T20:18:23,352     check.warn(importable)
2022-11-03T20:18:23,353   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,353       !!


2022-11-03T20:18:23,354       ############################
2022-11-03T20:18:23,355       # Package would be ignored #
2022-11-03T20:18:23,355       ############################
2022-11-03T20:18:23,355       Python recognizes 'cidc_schemas.schemas' as an importable package,
2022-11-03T20:18:23,356       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,356       'cidc_schemas.schemas' has been automatically added to the distribution only
2022-11-03T20:18:23,356       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,357       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,357       Please make sure that 'cidc_schemas.schemas' is included as a package by using
2022-11-03T20:18:23,358       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,358       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,358       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,359       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,359       documentation page.


2022-11-03T20:18:23,360   !!

2022-11-03T20:18:23,361     check.warn(importable)
2022-11-03T20:18:23,361   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.artifacts' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,361       !!


2022-11-03T20:18:23,362       ############################
2022-11-03T20:18:23,363       # Package would be ignored #
2022-11-03T20:18:23,363       ############################
2022-11-03T20:18:23,363       Python recognizes 'cidc_schemas.schemas.artifacts' as an importable package,
2022-11-03T20:18:23,363       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,364       'cidc_schemas.schemas.artifacts' has been automatically added to the distribution only
2022-11-03T20:18:23,364       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,365       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,365       Please make sure that 'cidc_schemas.schemas.artifacts' is included as a package by using
2022-11-03T20:18:23,365       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,366       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,366       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,366       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,367       documentation page.


2022-11-03T20:18:23,368   !!

2022-11-03T20:18:23,368     check.warn(importable)
2022-11-03T20:18:23,369   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,369       !!


2022-11-03T20:18:23,370       ############################
2022-11-03T20:18:23,370       # Package would be ignored #
2022-11-03T20:18:23,370       ############################
2022-11-03T20:18:23,370       Python recognizes 'cidc_schemas.schemas.assays' as an importable package,
2022-11-03T20:18:23,371       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,371       'cidc_schemas.schemas.assays' has been automatically added to the distribution only
2022-11-03T20:18:23,372       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,372       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,372       Please make sure that 'cidc_schemas.schemas.assays' is included as a package by using
2022-11-03T20:18:23,373       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,373       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,374       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,374       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,374       documentation page.


2022-11-03T20:18:23,375   !!

2022-11-03T20:18:23,376     check.warn(importable)
2022-11-03T20:18:23,376   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays.components' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,377       !!


2022-11-03T20:18:23,377       ############################
2022-11-03T20:18:23,378       # Package would be ignored #
2022-11-03T20:18:23,378       ############################
2022-11-03T20:18:23,378       Python recognizes 'cidc_schemas.schemas.assays.components' as an importable package,
2022-11-03T20:18:23,379       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,379       'cidc_schemas.schemas.assays.components' has been automatically added to the distribution only
2022-11-03T20:18:23,379       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,380       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,380       Please make sure that 'cidc_schemas.schemas.assays.components' is included as a package by using
2022-11-03T20:18:23,381       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,381       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,381       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,382       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,382       documentation page.


2022-11-03T20:18:23,383   !!

2022-11-03T20:18:23,383     check.warn(importable)
2022-11-03T20:18:23,384   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays.components.imaging' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,384       !!


2022-11-03T20:18:23,385       ############################
2022-11-03T20:18:23,385       # Package would be ignored #
2022-11-03T20:18:23,385       ############################
2022-11-03T20:18:23,386       Python recognizes 'cidc_schemas.schemas.assays.components.imaging' as an importable package,
2022-11-03T20:18:23,386       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,387       'cidc_schemas.schemas.assays.components.imaging' has been automatically added to the distribution only
2022-11-03T20:18:23,388       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,388       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,389       Please make sure that 'cidc_schemas.schemas.assays.components.imaging' is included as a package by using
2022-11-03T20:18:23,389       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,389       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,390       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,390       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,391       documentation page.


2022-11-03T20:18:23,391   !!

2022-11-03T20:18:23,392     check.warn(importable)
2022-11-03T20:18:23,393   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays.components.ngs' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,393       !!


2022-11-03T20:18:23,394       ############################
2022-11-03T20:18:23,395       # Package would be ignored #
2022-11-03T20:18:23,395       ############################
2022-11-03T20:18:23,396       Python recognizes 'cidc_schemas.schemas.assays.components.ngs' as an importable package,
2022-11-03T20:18:23,396       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,397       'cidc_schemas.schemas.assays.components.ngs' has been automatically added to the distribution only
2022-11-03T20:18:23,397       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,398       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,399       Please make sure that 'cidc_schemas.schemas.assays.components.ngs' is included as a package by using
2022-11-03T20:18:23,399       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,400       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,400       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,401       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,401       documentation page.


2022-11-03T20:18:23,402   !!

2022-11-03T20:18:23,403     check.warn(importable)
2022-11-03T20:18:23,403   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays.components.ngs.atacseq' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,403       !!


2022-11-03T20:18:23,404       ############################
2022-11-03T20:18:23,404       # Package would be ignored #
2022-11-03T20:18:23,405       ############################
2022-11-03T20:18:23,405       Python recognizes 'cidc_schemas.schemas.assays.components.ngs.atacseq' as an importable package,
2022-11-03T20:18:23,405       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,406       'cidc_schemas.schemas.assays.components.ngs.atacseq' has been automatically added to the distribution only
2022-11-03T20:18:23,406       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,406       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,407       Please make sure that 'cidc_schemas.schemas.assays.components.ngs.atacseq' is included as a package by using
2022-11-03T20:18:23,407       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,408       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,408       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,409       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,410       documentation page.


2022-11-03T20:18:23,412   !!

2022-11-03T20:18:23,413     check.warn(importable)
2022-11-03T20:18:23,414   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.assays.components.ngs.rna' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,414       !!


2022-11-03T20:18:23,415       ############################
2022-11-03T20:18:23,416       # Package would be ignored #
2022-11-03T20:18:23,416       ############################
2022-11-03T20:18:23,417       Python recognizes 'cidc_schemas.schemas.assays.components.ngs.rna' as an importable package,
2022-11-03T20:18:23,417       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,419       'cidc_schemas.schemas.assays.components.ngs.rna' has been automatically added to the distribution only
2022-11-03T20:18:23,419       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,420       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,420       Please make sure that 'cidc_schemas.schemas.assays.components.ngs.rna' is included as a package by using
2022-11-03T20:18:23,421       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,421       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,422       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,423       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,423       documentation page.


2022-11-03T20:18:23,425   !!

2022-11-03T20:18:23,426     check.warn(importable)
2022-11-03T20:18:23,426   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.templates.analyses' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,427       !!


2022-11-03T20:18:23,429       ############################
2022-11-03T20:18:23,429       # Package would be ignored #
2022-11-03T20:18:23,429       ############################
2022-11-03T20:18:23,430       Python recognizes 'cidc_schemas.schemas.templates.analyses' as an importable package,
2022-11-03T20:18:23,430       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,431       'cidc_schemas.schemas.templates.analyses' has been automatically added to the distribution only
2022-11-03T20:18:23,431       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,431       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,432       Please make sure that 'cidc_schemas.schemas.templates.analyses' is included as a package by using
2022-11-03T20:18:23,432       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,433       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,434       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,434       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,435       documentation page.


2022-11-03T20:18:23,435   !!

2022-11-03T20:18:23,436     check.warn(importable)
2022-11-03T20:18:23,436   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.templates.assays' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,437       !!


2022-11-03T20:18:23,438       ############################
2022-11-03T20:18:23,439       # Package would be ignored #
2022-11-03T20:18:23,439       ############################
2022-11-03T20:18:23,439       Python recognizes 'cidc_schemas.schemas.templates.assays' as an importable package,
2022-11-03T20:18:23,440       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,440       'cidc_schemas.schemas.templates.assays' has been automatically added to the distribution only
2022-11-03T20:18:23,440       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,441       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,442       Please make sure that 'cidc_schemas.schemas.templates.assays' is included as a package by using
2022-11-03T20:18:23,443       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,443       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,443       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,444       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,444       documentation page.


2022-11-03T20:18:23,445   !!

2022-11-03T20:18:23,446     check.warn(importable)
2022-11-03T20:18:23,446   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'cidc_schemas.schemas.templates.manifests' as data is deprecated, please list it in `packages`.
2022-11-03T20:18:23,446       !!


2022-11-03T20:18:23,447       ############################
2022-11-03T20:18:23,447       # Package would be ignored #
2022-11-03T20:18:23,448       ############################
2022-11-03T20:18:23,448       Python recognizes 'cidc_schemas.schemas.templates.manifests' as an importable package,
2022-11-03T20:18:23,448       but it is not listed in the `packages` configuration of setuptools.

2022-11-03T20:18:23,449       'cidc_schemas.schemas.templates.manifests' has been automatically added to the distribution only
2022-11-03T20:18:23,449       because it may contain data files, but this behavior is likely to change
2022-11-03T20:18:23,450       in future versions of setuptools (and therefore is considered deprecated).

2022-11-03T20:18:23,450       Please make sure that 'cidc_schemas.schemas.templates.manifests' is included as a package by using
2022-11-03T20:18:23,451       the `packages` configuration field or the proper discovery methods
2022-11-03T20:18:23,451       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-03T20:18:23,451       instead of `find_packages(...)`/`find:`).

2022-11-03T20:18:23,452       You can read more about "package discovery" and "data files" on setuptools
2022-11-03T20:18:23,452       documentation page.


2022-11-03T20:18:23,453   !!

2022-11-03T20:18:23,454     check.warn(importable)
2022-11-03T20:18:23,454   creating build/lib/cidc_schemas/metaschema
2022-11-03T20:18:23,454   copying cidc_schemas/metaschema/strict_meta_schema.json -> build/lib/cidc_schemas/metaschema
2022-11-03T20:18:23,455   creating build/lib/cidc_schemas/pipeline_configs
2022-11-03T20:18:23,455   copying cidc_schemas/pipeline_configs/rna_level1_analysis_config.yaml.j2 -> build/lib/cidc_schemas/pipeline_configs
2022-11-03T20:18:23,455   creating build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,456   copying cidc_schemas/schemas/aliquot.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,456   copying cidc_schemas/schemas/clinical_data.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,456   copying cidc_schemas/schemas/clinical_trial.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,457   copying cidc_schemas/schemas/participant.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,457   copying cidc_schemas/schemas/sample.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,457   copying cidc_schemas/schemas/shipping_core.json -> build/lib/cidc_schemas/schemas
2022-11-03T20:18:23,457   creating build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,458   copying cidc_schemas/schemas/artifacts/artifact_bam.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,458   copying cidc_schemas/schemas/artifacts/artifact_bam_bai.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,459   copying cidc_schemas/schemas/artifacts/artifact_bed.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,462   copying cidc_schemas/schemas/artifacts/artifact_bigwig.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,466   copying cidc_schemas/schemas/artifacts/artifact_binary.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,470   copying cidc_schemas/schemas/artifacts/artifact_clinical_csv.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,473   copying cidc_schemas/schemas/artifacts/artifact_clinical_docx.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,477   copying cidc_schemas/schemas/artifacts/artifact_clinical_xlsx.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,481   copying cidc_schemas/schemas/artifacts/artifact_cncf.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,485   copying cidc_schemas/schemas/artifacts/artifact_cns.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,489   copying cidc_schemas/schemas/artifacts/artifact_core.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,492   copying cidc_schemas/schemas/artifacts/artifact_csv.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,496   copying cidc_schemas/schemas/artifacts/artifact_elisa_xlsx.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,500   copying cidc_schemas/schemas/artifacts/artifact_fastq_gz.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,503   copying cidc_schemas/schemas/artifacts/artifact_fcs.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,507   copying cidc_schemas/schemas/artifacts/artifact_file.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,511   copying cidc_schemas/schemas/artifacts/artifact_gz.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,515   copying cidc_schemas/schemas/artifacts/artifact_image.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,518   copying cidc_schemas/schemas/artifacts/artifact_jpg.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,523   copying cidc_schemas/schemas/artifacts/artifact_json.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,527   copying cidc_schemas/schemas/artifacts/artifact_junction.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,530   copying cidc_schemas/schemas/artifacts/artifact_log.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,534   copying cidc_schemas/schemas/artifacts/artifact_maf.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,538   copying cidc_schemas/schemas/artifacts/artifact_narrowPeak.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,542   copying cidc_schemas/schemas/artifacts/artifact_npx.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,545   copying cidc_schemas/schemas/artifacts/artifact_pdf.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,549   copying cidc_schemas/schemas/artifacts/artifact_png.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,553   copying cidc_schemas/schemas/artifacts/artifact_rcc.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,557   copying cidc_schemas/schemas/artifacts/artifact_tbi.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,561   copying cidc_schemas/schemas/artifacts/artifact_text.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,564   copying cidc_schemas/schemas/artifacts/artifact_tsv.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,568   copying cidc_schemas/schemas/artifacts/artifact_vcf.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,573   copying cidc_schemas/schemas/artifacts/artifact_vcf_gz.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,576   copying cidc_schemas/schemas/artifacts/artifact_xlsx.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,580   copying cidc_schemas/schemas/artifacts/artifact_yaml.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,584   copying cidc_schemas/schemas/artifacts/artifact_zip.json -> build/lib/cidc_schemas/schemas/artifacts
2022-11-03T20:18:23,588   creating build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,589   copying cidc_schemas/schemas/assays/atacseq_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,593   copying cidc_schemas/schemas/assays/ctdna_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,597   copying cidc_schemas/schemas/assays/cytof_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,601   copying cidc_schemas/schemas/assays/cytof_assay_core.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,605   copying cidc_schemas/schemas/assays/elisa_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,609   copying cidc_schemas/schemas/assays/hande_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,613   copying cidc_schemas/schemas/assays/ihc_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,617   copying cidc_schemas/schemas/assays/mibi_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,622   copying cidc_schemas/schemas/assays/microbiome_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,625   copying cidc_schemas/schemas/assays/mif_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,629   copying cidc_schemas/schemas/assays/misc_data.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,633   copying cidc_schemas/schemas/assays/nanostring_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,637   copying cidc_schemas/schemas/assays/olink_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,641   copying cidc_schemas/schemas/assays/rna_assay-v0.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,645   copying cidc_schemas/schemas/assays/rna_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,650   copying cidc_schemas/schemas/assays/tcr_analysis.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,654   copying cidc_schemas/schemas/assays/tcr_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,659   copying cidc_schemas/schemas/assays/wes_analysis.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,664   copying cidc_schemas/schemas/assays/wes_assay.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,669   copying cidc_schemas/schemas/assays/wes_core.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,674   copying cidc_schemas/schemas/assays/wes_tumor_only_analysis.json -> build/lib/cidc_schemas/schemas/assays
2022-11-03T20:18:23,678   creating build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,680   copying cidc_schemas/schemas/assays/components/antibody.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,685   copying cidc_schemas/schemas/assays/components/assay_core.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,690   copying cidc_schemas/schemas/assays/components/available_assays.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,694   copying cidc_schemas/schemas/assays/components/available_ngs_analyses.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,699   copying cidc_schemas/schemas/assays/components/composite_image.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,703   copying cidc_schemas/schemas/assays/components/controls.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,707   copying cidc_schemas/schemas/assays/components/enrichment_core.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,712   copying cidc_schemas/schemas/assays/components/excluded_samples.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,716   copying cidc_schemas/schemas/assays/components/image.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,721   copying cidc_schemas/schemas/assays/components/imaging_data.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,725   copying cidc_schemas/schemas/assays/components/local_file.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,730   copying cidc_schemas/schemas/assays/components/mapping.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,734   copying cidc_schemas/schemas/assays/components/mibi_antibody.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,739   copying cidc_schemas/schemas/assays/components/mif_antibody.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,743   copying cidc_schemas/schemas/assays/components/multiple_local_files.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,748   copying cidc_schemas/schemas/assays/components/ngs_assay_core.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,752   copying cidc_schemas/schemas/assays/components/ngs_assay_record.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,756   copying cidc_schemas/schemas/assays/components/reads_core.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,760   copying cidc_schemas/schemas/assays/components/reads_with_index.json -> build/lib/cidc_schemas/schemas/assays/components
2022-11-03T20:18:23,764   creating build/lib/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:23,765   copying cidc_schemas/schemas/assays/components/imaging/mif_entry.json -> build/lib/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:23,769   copying cidc_schemas/schemas/assays/components/imaging/mif_export.json -> build/lib/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:23,773   copying cidc_schemas/schemas/assays/components/imaging/mif_input.json -> build/lib/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:23,777   copying cidc_schemas/schemas/assays/components/imaging/mif_roi.json -> build/lib/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:23,781   creating build/lib/cidc_schemas/schemas/assays/components/ngs
2022-11-03T20:18:23,783   copying cidc_schemas/schemas/assays/components/ngs/ngs_assay_record.json -> build/lib/cidc_schemas/schemas/assays/components/ngs
2022-11-03T20:18:23,787   creating build/lib/cidc_schemas/schemas/assays/components/ngs/atacseq
2022-11-03T20:18:23,788   copying cidc_schemas/schemas/assays/components/ngs/atacseq/atacseq_analysis.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/atacseq
2022-11-03T20:18:23,792   creating build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,794   copying cidc_schemas/schemas/assays/components/ngs/rna/fusion.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,798   copying cidc_schemas/schemas/assays/components/ngs/rna/microbiome.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,802   copying cidc_schemas/schemas/assays/components/ngs/rna/msisensor.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,806   copying cidc_schemas/schemas/assays/components/ngs/rna/neoantigen.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,810   copying cidc_schemas/schemas/assays/components/ngs/rna/rna_analysis.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,813   copying cidc_schemas/schemas/assays/components/ngs/rna/rna_level1_analysis.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,817   copying cidc_schemas/schemas/assays/components/ngs/rna/rseqc.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,821   copying cidc_schemas/schemas/assays/components/ngs/rna/salmon.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,825   copying cidc_schemas/schemas/assays/components/ngs/rna/star.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,828   copying cidc_schemas/schemas/assays/components/ngs/rna/trust4.json -> build/lib/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:23,832   creating build/lib/cidc_schemas/schemas/templates
2022-11-03T20:18:23,833   creating build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,835   copying cidc_schemas/schemas/templates/analyses/atacseq_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,840   copying cidc_schemas/schemas/templates/analyses/cytof_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,844   copying cidc_schemas/schemas/templates/analyses/rna_level1_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,849   copying cidc_schemas/schemas/templates/analyses/tcr_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,853   copying cidc_schemas/schemas/templates/analyses/wes_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,859   copying cidc_schemas/schemas/templates/analyses/wes_tumor_only_analysis_template.json -> build/lib/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:23,864   creating build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,866   copying cidc_schemas/schemas/templates/assays/atacseq_fastq_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,870   copying cidc_schemas/schemas/templates/assays/clinical_data_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,874   copying cidc_schemas/schemas/templates/assays/ctdna_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,878   copying cidc_schemas/schemas/templates/assays/cytof_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,883   copying cidc_schemas/schemas/templates/assays/elisa_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,887   copying cidc_schemas/schemas/templates/assays/hande_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,890   copying cidc_schemas/schemas/templates/assays/ihc_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,895   copying cidc_schemas/schemas/templates/assays/mibi_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,899   copying cidc_schemas/schemas/templates/assays/microbiome_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,903   copying cidc_schemas/schemas/templates/assays/mif_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,909   copying cidc_schemas/schemas/templates/assays/misc_data_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,912   copying cidc_schemas/schemas/templates/assays/nanostring_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,916   copying cidc_schemas/schemas/templates/assays/olink_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,921   copying cidc_schemas/schemas/templates/assays/rna_bam_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,925   copying cidc_schemas/schemas/templates/assays/rna_fastq_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,929   copying cidc_schemas/schemas/templates/assays/tcr_adaptive_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,933   copying cidc_schemas/schemas/templates/assays/tcr_fastq_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,937   copying cidc_schemas/schemas/templates/assays/wes_bam_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,940   copying cidc_schemas/schemas/templates/assays/wes_fastq_template.json -> build/lib/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:23,944   creating build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,946   copying cidc_schemas/schemas/templates/manifests/h_and_e_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,951   copying cidc_schemas/schemas/templates/manifests/microbiome_dna_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,956   copying cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,962   copying cidc_schemas/schemas/templates/manifests/normal_tissue_dna_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,967   copying cidc_schemas/schemas/templates/manifests/pbmc_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,972   copying cidc_schemas/schemas/templates/manifests/plasma_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,977   copying cidc_schemas/schemas/templates/manifests/tissue_slide_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,981   copying cidc_schemas/schemas/templates/manifests/tumor_normal_pairing_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,985   copying cidc_schemas/schemas/templates/manifests/tumor_tissue_dna_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:23,990   copying cidc_schemas/schemas/templates/manifests/tumor_tissue_rna_template.json -> build/lib/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,061   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-03T20:18:24,061     setuptools.SetuptoolsDeprecationWarning,
2022-11-03T20:18:24,117   installing to build/bdist.linux-armv7l/wheel
2022-11-03T20:18:24,117   running install
2022-11-03T20:18:24,179   running install_lib
2022-11-03T20:18:24,236   creating build/bdist.linux-armv7l
2022-11-03T20:18:24,237   creating build/bdist.linux-armv7l/wheel
2022-11-03T20:18:24,240   creating build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,243   creating build/bdist.linux-armv7l/wheel/cidc_schemas/pipeline_configs
2022-11-03T20:18:24,245   copying build/lib/cidc_schemas/pipeline_configs/rna_level1_analysis_config.yaml.j2 -> build/bdist.linux-armv7l/wheel/cidc_schemas/pipeline_configs
2022-11-03T20:18:24,248   copying build/lib/cidc_schemas/json_validation.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,253   copying build/lib/cidc_schemas/util.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,256   copying build/lib/cidc_schemas/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,260   copying build/lib/cidc_schemas/template_writer.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,266   creating build/bdist.linux-armv7l/wheel/cidc_schemas/metaschema
2022-11-03T20:18:24,267   copying build/lib/cidc_schemas/metaschema/strict_meta_schema.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/metaschema
2022-11-03T20:18:24,271   copying build/lib/cidc_schemas/template.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,279   creating build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,280   copying build/lib/cidc_schemas/prism/merger.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,285   copying build/lib/cidc_schemas/prism/__init__.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,288   copying build/lib/cidc_schemas/prism/core.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,292   copying build/lib/cidc_schemas/prism/extra_metadata.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,297   copying build/lib/cidc_schemas/prism/constants.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,300   copying build/lib/cidc_schemas/prism/pipelines.py -> build/bdist.linux-armv7l/wheel/cidc_schemas/prism
2022-11-03T20:18:24,306   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,309   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,311   copying build/lib/cidc_schemas/schemas/artifacts/artifact_tbi.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,315   copying build/lib/cidc_schemas/schemas/artifacts/artifact_tsv.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,318   copying build/lib/cidc_schemas/schemas/artifacts/artifact_pdf.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,321   copying build/lib/cidc_schemas/schemas/artifacts/artifact_npx.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,324   copying build/lib/cidc_schemas/schemas/artifacts/artifact_elisa_xlsx.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,327   copying build/lib/cidc_schemas/schemas/artifacts/artifact_cns.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,331   copying build/lib/cidc_schemas/schemas/artifacts/artifact_clinical_csv.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,334   copying build/lib/cidc_schemas/schemas/artifacts/artifact_jpg.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,337   copying build/lib/cidc_schemas/schemas/artifacts/artifact_log.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,341   copying build/lib/cidc_schemas/schemas/artifacts/artifact_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,344   copying build/lib/cidc_schemas/schemas/artifacts/artifact_clinical_docx.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,348   copying build/lib/cidc_schemas/schemas/artifacts/artifact_json.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,351   copying build/lib/cidc_schemas/schemas/artifacts/artifact_maf.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,354   copying build/lib/cidc_schemas/schemas/artifacts/artifact_bam.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,357   copying build/lib/cidc_schemas/schemas/artifacts/artifact_image.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,361   copying build/lib/cidc_schemas/schemas/artifacts/artifact_vcf.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,364   copying build/lib/cidc_schemas/schemas/artifacts/artifact_clinical_xlsx.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,367   copying build/lib/cidc_schemas/schemas/artifacts/artifact_bigwig.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,371   copying build/lib/cidc_schemas/schemas/artifacts/artifact_text.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,374   copying build/lib/cidc_schemas/schemas/artifacts/artifact_yaml.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,377   copying build/lib/cidc_schemas/schemas/artifacts/artifact_xlsx.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,380   copying build/lib/cidc_schemas/schemas/artifacts/artifact_cncf.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,383   copying build/lib/cidc_schemas/schemas/artifacts/artifact_binary.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,386   copying build/lib/cidc_schemas/schemas/artifacts/artifact_bam_bai.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,389   copying build/lib/cidc_schemas/schemas/artifacts/artifact_csv.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,393   copying build/lib/cidc_schemas/schemas/artifacts/artifact_fcs.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,396   copying build/lib/cidc_schemas/schemas/artifacts/artifact_fastq_gz.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,399   copying build/lib/cidc_schemas/schemas/artifacts/artifact_junction.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,402   copying build/lib/cidc_schemas/schemas/artifacts/artifact_bed.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,405   copying build/lib/cidc_schemas/schemas/artifacts/artifact_narrowPeak.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,408   copying build/lib/cidc_schemas/schemas/artifacts/artifact_vcf_gz.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,411   copying build/lib/cidc_schemas/schemas/artifacts/artifact_zip.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,414   copying build/lib/cidc_schemas/schemas/artifacts/artifact_gz.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,418   copying build/lib/cidc_schemas/schemas/artifacts/artifact_file.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,421   copying build/lib/cidc_schemas/schemas/artifacts/artifact_rcc.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,425   copying build/lib/cidc_schemas/schemas/artifacts/artifact_png.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/artifacts
2022-11-03T20:18:24,428   copying build/lib/cidc_schemas/schemas/aliquot.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,431   copying build/lib/cidc_schemas/schemas/clinical_data.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,434   copying build/lib/cidc_schemas/schemas/participant.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,440   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,441   copying build/lib/cidc_schemas/schemas/assays/tcr_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,445   copying build/lib/cidc_schemas/schemas/assays/microbiome_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,448   copying build/lib/cidc_schemas/schemas/assays/mif_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,452   copying build/lib/cidc_schemas/schemas/assays/cytof_assay_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,456   copying build/lib/cidc_schemas/schemas/assays/atacseq_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,459   copying build/lib/cidc_schemas/schemas/assays/hande_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,462   copying build/lib/cidc_schemas/schemas/assays/misc_data.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,465   copying build/lib/cidc_schemas/schemas/assays/rna_assay-v0.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,469   copying build/lib/cidc_schemas/schemas/assays/cytof_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,473   copying build/lib/cidc_schemas/schemas/assays/ctdna_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,476   copying build/lib/cidc_schemas/schemas/assays/wes_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,480   copying build/lib/cidc_schemas/schemas/assays/elisa_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,483   copying build/lib/cidc_schemas/schemas/assays/wes_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,486   copying build/lib/cidc_schemas/schemas/assays/ihc_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,490   copying build/lib/cidc_schemas/schemas/assays/wes_tumor_only_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,493   copying build/lib/cidc_schemas/schemas/assays/nanostring_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,496   copying build/lib/cidc_schemas/schemas/assays/mibi_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,500   copying build/lib/cidc_schemas/schemas/assays/rna_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,504   copying build/lib/cidc_schemas/schemas/assays/olink_assay.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,510   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,512   copying build/lib/cidc_schemas/schemas/assays/components/image.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,517   copying build/lib/cidc_schemas/schemas/assays/components/local_file.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,521   copying build/lib/cidc_schemas/schemas/assays/components/controls.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,524   copying build/lib/cidc_schemas/schemas/assays/components/mapping.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,528   copying build/lib/cidc_schemas/schemas/assays/components/reads_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,532   copying build/lib/cidc_schemas/schemas/assays/components/available_ngs_analyses.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,536   copying build/lib/cidc_schemas/schemas/assays/components/excluded_samples.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,540   copying build/lib/cidc_schemas/schemas/assays/components/mif_antibody.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,545   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs
2022-11-03T20:18:24,549   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,551   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/salmon.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,555   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/microbiome.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,559   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/msisensor.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,563   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/star.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,567   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/fusion.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,571   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/rna_level1_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,575   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/trust4.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,579   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/rseqc.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,583   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/neoantigen.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,587   copying build/lib/cidc_schemas/schemas/assays/components/ngs/rna/rna_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/rna
2022-11-03T20:18:24,592   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/atacseq
2022-11-03T20:18:24,594   copying build/lib/cidc_schemas/schemas/assays/components/ngs/atacseq/atacseq_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs/atacseq
2022-11-03T20:18:24,599   copying build/lib/cidc_schemas/schemas/assays/components/ngs/ngs_assay_record.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/ngs
2022-11-03T20:18:24,603   copying build/lib/cidc_schemas/schemas/assays/components/antibody.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,607   copying build/lib/cidc_schemas/schemas/assays/components/reads_with_index.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,610   copying build/lib/cidc_schemas/schemas/assays/components/mibi_antibody.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,613   copying build/lib/cidc_schemas/schemas/assays/components/assay_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,616   copying build/lib/cidc_schemas/schemas/assays/components/multiple_local_files.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,620   copying build/lib/cidc_schemas/schemas/assays/components/ngs_assay_record.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,623   copying build/lib/cidc_schemas/schemas/assays/components/enrichment_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,626   copying build/lib/cidc_schemas/schemas/assays/components/imaging_data.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,630   copying build/lib/cidc_schemas/schemas/assays/components/available_assays.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,634   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:24,636   copying build/lib/cidc_schemas/schemas/assays/components/imaging/mif_export.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:24,639   copying build/lib/cidc_schemas/schemas/assays/components/imaging/mif_roi.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:24,642   copying build/lib/cidc_schemas/schemas/assays/components/imaging/mif_entry.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:24,646   copying build/lib/cidc_schemas/schemas/assays/components/imaging/mif_input.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components/imaging
2022-11-03T20:18:24,649   copying build/lib/cidc_schemas/schemas/assays/components/ngs_assay_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,653   copying build/lib/cidc_schemas/schemas/assays/components/composite_image.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays/components
2022-11-03T20:18:24,656   copying build/lib/cidc_schemas/schemas/assays/wes_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,660   copying build/lib/cidc_schemas/schemas/assays/tcr_analysis.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/assays
2022-11-03T20:18:24,665   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates
2022-11-03T20:18:24,667   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,669   copying build/lib/cidc_schemas/schemas/templates/manifests/tumor_normal_pairing_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,673   copying build/lib/cidc_schemas/schemas/templates/manifests/pbmc_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,678   copying build/lib/cidc_schemas/schemas/templates/manifests/normal_tissue_dna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,683   copying build/lib/cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,688   copying build/lib/cidc_schemas/schemas/templates/manifests/tumor_tissue_rna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,693   copying build/lib/cidc_schemas/schemas/templates/manifests/microbiome_dna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,697   copying build/lib/cidc_schemas/schemas/templates/manifests/tumor_tissue_dna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,701   copying build/lib/cidc_schemas/schemas/templates/manifests/plasma_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,705   copying build/lib/cidc_schemas/schemas/templates/manifests/h_and_e_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,709   copying build/lib/cidc_schemas/schemas/templates/manifests/tissue_slide_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/manifests
2022-11-03T20:18:24,714   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,716   copying build/lib/cidc_schemas/schemas/templates/analyses/rna_level1_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,720   copying build/lib/cidc_schemas/schemas/templates/analyses/wes_tumor_only_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,724   copying build/lib/cidc_schemas/schemas/templates/analyses/tcr_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,727   copying build/lib/cidc_schemas/schemas/templates/analyses/atacseq_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,731   copying build/lib/cidc_schemas/schemas/templates/analyses/cytof_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,735   copying build/lib/cidc_schemas/schemas/templates/analyses/wes_analysis_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/analyses
2022-11-03T20:18:24,741   creating build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,743   copying build/lib/cidc_schemas/schemas/templates/assays/wes_bam_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,746   copying build/lib/cidc_schemas/schemas/templates/assays/mibi_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,750   copying build/lib/cidc_schemas/schemas/templates/assays/ihc_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,754   copying build/lib/cidc_schemas/schemas/templates/assays/cytof_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,758   copying build/lib/cidc_schemas/schemas/templates/assays/clinical_data_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,761   copying build/lib/cidc_schemas/schemas/templates/assays/hande_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,764   copying build/lib/cidc_schemas/schemas/templates/assays/olink_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,768   copying build/lib/cidc_schemas/schemas/templates/assays/elisa_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,771   copying build/lib/cidc_schemas/schemas/templates/assays/atacseq_fastq_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,774   copying build/lib/cidc_schemas/schemas/templates/assays/microbiome_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,777   copying build/lib/cidc_schemas/schemas/templates/assays/tcr_adaptive_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,781   copying build/lib/cidc_schemas/schemas/templates/assays/nanostring_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,784   copying build/lib/cidc_schemas/schemas/templates/assays/rna_bam_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,787   copying build/lib/cidc_schemas/schemas/templates/assays/ctdna_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,791   copying build/lib/cidc_schemas/schemas/templates/assays/misc_data_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,794   copying build/lib/cidc_schemas/schemas/templates/assays/rna_fastq_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,797   copying build/lib/cidc_schemas/schemas/templates/assays/wes_fastq_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,800   copying build/lib/cidc_schemas/schemas/templates/assays/mif_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,805   copying build/lib/cidc_schemas/schemas/templates/assays/tcr_fastq_template.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas/templates/assays
2022-11-03T20:18:24,808   copying build/lib/cidc_schemas/schemas/sample.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,812   copying build/lib/cidc_schemas/schemas/shipping_core.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,815   copying build/lib/cidc_schemas/schemas/clinical_trial.json -> build/bdist.linux-armv7l/wheel/cidc_schemas/schemas
2022-11-03T20:18:24,819   copying build/lib/cidc_schemas/cli.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,823   copying build/lib/cidc_schemas/unprism.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,827   copying build/lib/cidc_schemas/constants.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,830   copying build/lib/cidc_schemas/template_reader.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,834   copying build/lib/cidc_schemas/migrations.py -> build/bdist.linux-armv7l/wheel/cidc_schemas
2022-11-03T20:18:24,838   running install_egg_info
2022-11-03T20:18:24,903   Copying cidc_schemas.egg-info to build/bdist.linux-armv7l/wheel/cidc_schemas-0.26.9-py3.7.egg-info
2022-11-03T20:18:24,929   running install_scripts
2022-11-03T20:18:25,123   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-11-03T20:18:25,125   adding license file "AUTHORS.rst" (matched pattern "AUTHORS*")
2022-11-03T20:18:25,135   creating build/bdist.linux-armv7l/wheel/cidc_schemas-0.26.9.dist-info/WHEEL
2022-11-03T20:18:25,140   creating '/tmp/pip-wheel-za5419zn/cidc_schemas-0.26.9-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-03T20:18:25,145   adding 'cidc_schemas/__init__.py'
2022-11-03T20:18:25,148   adding 'cidc_schemas/cli.py'
2022-11-03T20:18:25,150   adding 'cidc_schemas/constants.py'
2022-11-03T20:18:25,156   adding 'cidc_schemas/json_validation.py'
2022-11-03T20:18:25,161   adding 'cidc_schemas/migrations.py'
2022-11-03T20:18:25,177   adding 'cidc_schemas/template.py'
2022-11-03T20:18:25,182   adding 'cidc_schemas/template_reader.py'
2022-11-03T20:18:25,188   adding 'cidc_schemas/template_writer.py'
2022-11-03T20:18:25,193   adding 'cidc_schemas/unprism.py'
2022-11-03T20:18:25,196   adding 'cidc_schemas/util.py'
2022-11-03T20:18:25,200   adding 'cidc_schemas/metaschema/strict_meta_schema.json'
2022-11-03T20:18:25,204   adding 'cidc_schemas/pipeline_configs/rna_level1_analysis_config.yaml.j2'
2022-11-03T20:18:25,207   adding 'cidc_schemas/prism/__init__.py'
2022-11-03T20:18:25,210   adding 'cidc_schemas/prism/constants.py'
2022-11-03T20:18:25,215   adding 'cidc_schemas/prism/core.py'
2022-11-03T20:18:25,220   adding 'cidc_schemas/prism/extra_metadata.py'
2022-11-03T20:18:25,224   adding 'cidc_schemas/prism/merger.py'
2022-11-03T20:18:25,232   adding 'cidc_schemas/prism/pipelines.py'
2022-11-03T20:18:25,236   adding 'cidc_schemas/schemas/aliquot.json'
2022-11-03T20:18:25,238   adding 'cidc_schemas/schemas/clinical_data.json'
2022-11-03T20:18:25,241   adding 'cidc_schemas/schemas/clinical_trial.json'
2022-11-03T20:18:25,244   adding 'cidc_schemas/schemas/participant.json'
2022-11-03T20:18:25,248   adding 'cidc_schemas/schemas/sample.json'
2022-11-03T20:18:25,251   adding 'cidc_schemas/schemas/shipping_core.json'
2022-11-03T20:18:25,256   adding 'cidc_schemas/schemas/artifacts/artifact_bam.json'
2022-11-03T20:18:25,258   adding 'cidc_schemas/schemas/artifacts/artifact_bam_bai.json'
2022-11-03T20:18:25,261   adding 'cidc_schemas/schemas/artifacts/artifact_bed.json'
2022-11-03T20:18:25,263   adding 'cidc_schemas/schemas/artifacts/artifact_bigwig.json'
2022-11-03T20:18:25,265   adding 'cidc_schemas/schemas/artifacts/artifact_binary.json'
2022-11-03T20:18:25,268   adding 'cidc_schemas/schemas/artifacts/artifact_clinical_csv.json'
2022-11-03T20:18:25,270   adding 'cidc_schemas/schemas/artifacts/artifact_clinical_docx.json'
2022-11-03T20:18:25,273   adding 'cidc_schemas/schemas/artifacts/artifact_clinical_xlsx.json'
2022-11-03T20:18:25,275   adding 'cidc_schemas/schemas/artifacts/artifact_cncf.json'
2022-11-03T20:18:25,277   adding 'cidc_schemas/schemas/artifacts/artifact_cns.json'
2022-11-03T20:18:25,280   adding 'cidc_schemas/schemas/artifacts/artifact_core.json'
2022-11-03T20:18:25,282   adding 'cidc_schemas/schemas/artifacts/artifact_csv.json'
2022-11-03T20:18:25,285   adding 'cidc_schemas/schemas/artifacts/artifact_elisa_xlsx.json'
2022-11-03T20:18:25,287   adding 'cidc_schemas/schemas/artifacts/artifact_fastq_gz.json'
2022-11-03T20:18:25,289   adding 'cidc_schemas/schemas/artifacts/artifact_fcs.json'
2022-11-03T20:18:25,292   adding 'cidc_schemas/schemas/artifacts/artifact_file.json'
2022-11-03T20:18:25,294   adding 'cidc_schemas/schemas/artifacts/artifact_gz.json'
2022-11-03T20:18:25,296   adding 'cidc_schemas/schemas/artifacts/artifact_image.json'
2022-11-03T20:18:25,299   adding 'cidc_schemas/schemas/artifacts/artifact_jpg.json'
2022-11-03T20:18:25,301   adding 'cidc_schemas/schemas/artifacts/artifact_json.json'
2022-11-03T20:18:25,303   adding 'cidc_schemas/schemas/artifacts/artifact_junction.json'
2022-11-03T20:18:25,305   adding 'cidc_schemas/schemas/artifacts/artifact_log.json'
2022-11-03T20:18:25,308   adding 'cidc_schemas/schemas/artifacts/artifact_maf.json'
2022-11-03T20:18:25,310   adding 'cidc_schemas/schemas/artifacts/artifact_narrowPeak.json'
2022-11-03T20:18:25,313   adding 'cidc_schemas/schemas/artifacts/artifact_npx.json'
2022-11-03T20:18:25,315   adding 'cidc_schemas/schemas/artifacts/artifact_pdf.json'
2022-11-03T20:18:25,317   adding 'cidc_schemas/schemas/artifacts/artifact_png.json'
2022-11-03T20:18:25,320   adding 'cidc_schemas/schemas/artifacts/artifact_rcc.json'
2022-11-03T20:18:25,322   adding 'cidc_schemas/schemas/artifacts/artifact_tbi.json'
2022-11-03T20:18:25,324   adding 'cidc_schemas/schemas/artifacts/artifact_text.json'
2022-11-03T20:18:25,327   adding 'cidc_schemas/schemas/artifacts/artifact_tsv.json'
2022-11-03T20:18:25,329   adding 'cidc_schemas/schemas/artifacts/artifact_vcf.json'
2022-11-03T20:18:25,331   adding 'cidc_schemas/schemas/artifacts/artifact_vcf_gz.json'
2022-11-03T20:18:25,334   adding 'cidc_schemas/schemas/artifacts/artifact_xlsx.json'
2022-11-03T20:18:25,336   adding 'cidc_schemas/schemas/artifacts/artifact_yaml.json'
2022-11-03T20:18:25,338   adding 'cidc_schemas/schemas/artifacts/artifact_zip.json'
2022-11-03T20:18:25,343   adding 'cidc_schemas/schemas/assays/atacseq_assay.json'
2022-11-03T20:18:25,345   adding 'cidc_schemas/schemas/assays/ctdna_assay.json'
2022-11-03T20:18:25,348   adding 'cidc_schemas/schemas/assays/cytof_assay.json'
2022-11-03T20:18:25,351   adding 'cidc_schemas/schemas/assays/cytof_assay_core.json'
2022-11-03T20:18:25,354   adding 'cidc_schemas/schemas/assays/elisa_assay.json'
2022-11-03T20:18:25,356   adding 'cidc_schemas/schemas/assays/hande_assay.json'
2022-11-03T20:18:25,360   adding 'cidc_schemas/schemas/assays/ihc_assay.json'
2022-11-03T20:18:25,362   adding 'cidc_schemas/schemas/assays/mibi_assay.json'
2022-11-03T20:18:25,365   adding 'cidc_schemas/schemas/assays/microbiome_assay.json'
2022-11-03T20:18:25,367   adding 'cidc_schemas/schemas/assays/mif_assay.json'
2022-11-03T20:18:25,370   adding 'cidc_schemas/schemas/assays/misc_data.json'
2022-11-03T20:18:25,373   adding 'cidc_schemas/schemas/assays/nanostring_assay.json'
2022-11-03T20:18:25,375   adding 'cidc_schemas/schemas/assays/olink_assay.json'
2022-11-03T20:18:25,378   adding 'cidc_schemas/schemas/assays/rna_assay-v0.json'
2022-11-03T20:18:25,380   adding 'cidc_schemas/schemas/assays/rna_assay.json'
2022-11-03T20:18:25,383   adding 'cidc_schemas/schemas/assays/tcr_analysis.json'
2022-11-03T20:18:25,385   adding 'cidc_schemas/schemas/assays/tcr_assay.json'
2022-11-03T20:18:25,388   adding 'cidc_schemas/schemas/assays/wes_analysis.json'
2022-11-03T20:18:25,391   adding 'cidc_schemas/schemas/assays/wes_assay.json'
2022-11-03T20:18:25,394   adding 'cidc_schemas/schemas/assays/wes_core.json'
2022-11-03T20:18:25,397   adding 'cidc_schemas/schemas/assays/wes_tumor_only_analysis.json'
2022-11-03T20:18:25,401   adding 'cidc_schemas/schemas/assays/components/antibody.json'
2022-11-03T20:18:25,403   adding 'cidc_schemas/schemas/assays/components/assay_core.json'
2022-11-03T20:18:25,406   adding 'cidc_schemas/schemas/assays/components/available_assays.json'
2022-11-03T20:18:25,408   adding 'cidc_schemas/schemas/assays/components/available_ngs_analyses.json'
2022-11-03T20:18:25,410   adding 'cidc_schemas/schemas/assays/components/composite_image.json'
2022-11-03T20:18:25,413   adding 'cidc_schemas/schemas/assays/components/controls.json'
2022-11-03T20:18:25,415   adding 'cidc_schemas/schemas/assays/components/enrichment_core.json'
2022-11-03T20:18:25,417   adding 'cidc_schemas/schemas/assays/components/excluded_samples.json'
2022-11-03T20:18:25,419   adding 'cidc_schemas/schemas/assays/components/image.json'
2022-11-03T20:18:25,422   adding 'cidc_schemas/schemas/assays/components/imaging_data.json'
2022-11-03T20:18:25,424   adding 'cidc_schemas/schemas/assays/components/local_file.json'
2022-11-03T20:18:25,426   adding 'cidc_schemas/schemas/assays/components/mapping.json'
2022-11-03T20:18:25,429   adding 'cidc_schemas/schemas/assays/components/mibi_antibody.json'
2022-11-03T20:18:25,431   adding 'cidc_schemas/schemas/assays/components/mif_antibody.json'
2022-11-03T20:18:25,434   adding 'cidc_schemas/schemas/assays/components/multiple_local_files.json'
2022-11-03T20:18:25,436   adding 'cidc_schemas/schemas/assays/components/ngs_assay_core.json'
2022-11-03T20:18:25,438   adding 'cidc_schemas/schemas/assays/components/ngs_assay_record.json'
2022-11-03T20:18:25,441   adding 'cidc_schemas/schemas/assays/components/reads_core.json'
2022-11-03T20:18:25,443   adding 'cidc_schemas/schemas/assays/components/reads_with_index.json'
2022-11-03T20:18:25,446   adding 'cidc_schemas/schemas/assays/components/imaging/mif_entry.json'
2022-11-03T20:18:25,449   adding 'cidc_schemas/schemas/assays/components/imaging/mif_export.json'
2022-11-03T20:18:25,451   adding 'cidc_schemas/schemas/assays/components/imaging/mif_input.json'
2022-11-03T20:18:25,454   adding 'cidc_schemas/schemas/assays/components/imaging/mif_roi.json'
2022-11-03T20:18:25,457   adding 'cidc_schemas/schemas/assays/components/ngs/ngs_assay_record.json'
2022-11-03T20:18:25,461   adding 'cidc_schemas/schemas/assays/components/ngs/atacseq/atacseq_analysis.json'
2022-11-03T20:18:25,464   adding 'cidc_schemas/schemas/assays/components/ngs/rna/fusion.json'
2022-11-03T20:18:25,466   adding 'cidc_schemas/schemas/assays/components/ngs/rna/microbiome.json'
2022-11-03T20:18:25,469   adding 'cidc_schemas/schemas/assays/components/ngs/rna/msisensor.json'
2022-11-03T20:18:25,471   adding 'cidc_schemas/schemas/assays/components/ngs/rna/neoantigen.json'
2022-11-03T20:18:25,473   adding 'cidc_schemas/schemas/assays/components/ngs/rna/rna_analysis.json'
2022-11-03T20:18:25,475   adding 'cidc_schemas/schemas/assays/components/ngs/rna/rna_level1_analysis.json'
2022-11-03T20:18:25,478   adding 'cidc_schemas/schemas/assays/components/ngs/rna/rseqc.json'
2022-11-03T20:18:25,480   adding 'cidc_schemas/schemas/assays/components/ngs/rna/salmon.json'
2022-11-03T20:18:25,482   adding 'cidc_schemas/schemas/assays/components/ngs/rna/star.json'
2022-11-03T20:18:25,484   adding 'cidc_schemas/schemas/assays/components/ngs/rna/trust4.json'
2022-11-03T20:18:25,489   adding 'cidc_schemas/schemas/templates/analyses/atacseq_analysis_template.json'
2022-11-03T20:18:25,492   adding 'cidc_schemas/schemas/templates/analyses/cytof_analysis_template.json'
2022-11-03T20:18:25,495   adding 'cidc_schemas/schemas/templates/analyses/rna_level1_analysis_template.json'
2022-11-03T20:18:25,498   adding 'cidc_schemas/schemas/templates/analyses/tcr_analysis_template.json'
2022-11-03T20:18:25,503   adding 'cidc_schemas/schemas/templates/analyses/wes_analysis_template.json'
2022-11-03T20:18:25,507   adding 'cidc_schemas/schemas/templates/analyses/wes_tumor_only_analysis_template.json'
2022-11-03T20:18:25,511   adding 'cidc_schemas/schemas/templates/assays/atacseq_fastq_template.json'
2022-11-03T20:18:25,513   adding 'cidc_schemas/schemas/templates/assays/clinical_data_template.json'
2022-11-03T20:18:25,516   adding 'cidc_schemas/schemas/templates/assays/ctdna_template.json'
2022-11-03T20:18:25,519   adding 'cidc_schemas/schemas/templates/assays/cytof_template.json'
2022-11-03T20:18:25,522   adding 'cidc_schemas/schemas/templates/assays/elisa_template.json'
2022-11-03T20:18:25,525   adding 'cidc_schemas/schemas/templates/assays/hande_template.json'
2022-11-03T20:18:25,528   adding 'cidc_schemas/schemas/templates/assays/ihc_template.json'
2022-11-03T20:18:25,531   adding 'cidc_schemas/schemas/templates/assays/mibi_template.json'
2022-11-03T20:18:25,534   adding 'cidc_schemas/schemas/templates/assays/microbiome_template.json'
2022-11-03T20:18:25,538   adding 'cidc_schemas/schemas/templates/assays/mif_template.json'
2022-11-03T20:18:25,540   adding 'cidc_schemas/schemas/templates/assays/misc_data_template.json'
2022-11-03T20:18:25,543   adding 'cidc_schemas/schemas/templates/assays/nanostring_template.json'
2022-11-03T20:18:25,546   adding 'cidc_schemas/schemas/templates/assays/olink_template.json'
2022-11-03T20:18:25,548   adding 'cidc_schemas/schemas/templates/assays/rna_bam_template.json'
2022-11-03T20:18:25,551   adding 'cidc_schemas/schemas/templates/assays/rna_fastq_template.json'
2022-11-03T20:18:25,553   adding 'cidc_schemas/schemas/templates/assays/tcr_adaptive_template.json'
2022-11-03T20:18:25,556   adding 'cidc_schemas/schemas/templates/assays/tcr_fastq_template.json'
2022-11-03T20:18:25,558   adding 'cidc_schemas/schemas/templates/assays/wes_bam_template.json'
2022-11-03T20:18:25,561   adding 'cidc_schemas/schemas/templates/assays/wes_fastq_template.json'
2022-11-03T20:18:25,565   adding 'cidc_schemas/schemas/templates/manifests/h_and_e_template.json'
2022-11-03T20:18:25,569   adding 'cidc_schemas/schemas/templates/manifests/microbiome_dna_template.json'
2022-11-03T20:18:25,573   adding 'cidc_schemas/schemas/templates/manifests/normal_blood_dna_template.json'
2022-11-03T20:18:25,576   adding 'cidc_schemas/schemas/templates/manifests/normal_tissue_dna_template.json'
2022-11-03T20:18:25,580   adding 'cidc_schemas/schemas/templates/manifests/pbmc_template.json'
2022-11-03T20:18:25,584   adding 'cidc_schemas/schemas/templates/manifests/plasma_template.json'
2022-11-03T20:18:25,587   adding 'cidc_schemas/schemas/templates/manifests/tissue_slide_template.json'
2022-11-03T20:18:25,590   adding 'cidc_schemas/schemas/templates/manifests/tumor_normal_pairing_template.json'
2022-11-03T20:18:25,593   adding 'cidc_schemas/schemas/templates/manifests/tumor_tissue_dna_template.json'
2022-11-03T20:18:25,597   adding 'cidc_schemas/schemas/templates/manifests/tumor_tissue_rna_template.json'
2022-11-03T20:18:25,602   adding 'cidc_schemas-0.26.9.dist-info/AUTHORS.rst'
2022-11-03T20:18:25,604   adding 'cidc_schemas-0.26.9.dist-info/LICENSE'
2022-11-03T20:18:25,607   adding 'cidc_schemas-0.26.9.dist-info/METADATA'
2022-11-03T20:18:25,609   adding 'cidc_schemas-0.26.9.dist-info/WHEEL'
2022-11-03T20:18:25,610   adding 'cidc_schemas-0.26.9.dist-info/entry_points.txt'
2022-11-03T20:18:25,612   adding 'cidc_schemas-0.26.9.dist-info/top_level.txt'
2022-11-03T20:18:25,619   adding 'cidc_schemas-0.26.9.dist-info/RECORD'
2022-11-03T20:18:25,633   removing build/bdist.linux-armv7l/wheel
2022-11-03T20:18:25,957   Building wheel for cidc-schemas (setup.py): finished with status 'done'
2022-11-03T20:18:25,969   Created wheel for cidc-schemas: filename=cidc_schemas-0.26.9-py2.py3-none-any.whl size=191173 sha256=872ca8b44e583502dfe7e423f9d786ca9722bbc26a26a7ca814fd9b1a6665168
2022-11-03T20:18:25,971   Stored in directory: /tmp/pip-ephem-wheel-cache-tnxyvf61/wheels/3b/3e/3c/53f0043e60155bbe0308b2864d022f3eaad1e18cd40ebefa1a
2022-11-03T20:18:26,011 Successfully built cidc-schemas
2022-11-03T20:18:26,035 Removed build tracker: '/tmp/pip-build-tracker-9co_y5ok'