2022-11-04T00:18:58,519 Created temporary directory: /tmp/pip-ephem-wheel-cache-dosvzr88
2022-11-04T00:18:58,524 Created temporary directory: /tmp/pip-build-tracker-0xaxx6sa
2022-11-04T00:18:58,525 Initialized build tracking at /tmp/pip-build-tracker-0xaxx6sa
2022-11-04T00:18:58,525 Created build tracker: /tmp/pip-build-tracker-0xaxx6sa
2022-11-04T00:18:58,526 Entered build tracker: /tmp/pip-build-tracker-0xaxx6sa
2022-11-04T00:18:58,527 Created temporary directory: /tmp/pip-wheel-dxzsfh5c
2022-11-04T00:18:58,535 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-04T00:18:58,540 Created temporary directory: /tmp/pip-ephem-wheel-cache-9vpx285_
2022-11-04T00:18:58,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-04T00:18:58,605 2 location(s) to search for versions of aaftf:
2022-11-04T00:18:58,605 * https://pypi.org/simple/aaftf/
2022-11-04T00:18:58,605 * https://www.piwheels.org/simple/aaftf/
2022-11-04T00:18:58,606 Fetching project page and analyzing links: https://pypi.org/simple/aaftf/
2022-11-04T00:18:58,607 Getting page https://pypi.org/simple/aaftf/
2022-11-04T00:18:58,610 Found index url https://pypi.org/simple
2022-11-04T00:18:58,835 Fetched page https://pypi.org/simple/aaftf/ as application/vnd.pypi.simple.v1+json
2022-11-04T00:18:58,838   Found link https://files.pythonhosted.org/packages/a1/88/6051f1d9f7bec395e64a577014851d6df2606e270629ca99346f47e8e815/AAFTF-0.3.2.tar.gz (from https://pypi.org/simple/aaftf/), version: 0.3.2
2022-11-04T00:18:58,839   Found link https://files.pythonhosted.org/packages/9e/0b/fa5f7e3546030f059666a3b79e7f93698cbe14020a74c97bdc7f0cb5780a/AAFTF-0.3.3.tar.gz (from https://pypi.org/simple/aaftf/), version: 0.3.3
2022-11-04T00:18:58,840   Found link https://files.pythonhosted.org/packages/1b/35/6a3bb933c75e05cabbbbafc9430615cad5ccf9481aae13dfafa7a32ad55f/AAFTF-0.3.4.tar.gz (from https://pypi.org/simple/aaftf/), version: 0.3.4
2022-11-04T00:18:58,840 Fetching project page and analyzing links: https://www.piwheels.org/simple/aaftf/
2022-11-04T00:18:58,841 Getting page https://www.piwheels.org/simple/aaftf/
2022-11-04T00:18:58,843 Found index url https://www.piwheels.org/simple
2022-11-04T00:18:59,071 Fetched page https://www.piwheels.org/simple/aaftf/ as text/html
2022-11-04T00:18:59,074   Skipping link: No binaries permitted for aaftf: https://www.piwheels.org/simple/aaftf/AAFTF-0.3.3-py3-none-any.whl#sha256=6eb1782c11bc8979277d26467e2c09f7aea4c00976ec9e6b65c3a56f081ef0db (from https://www.piwheels.org/simple/aaftf/)
2022-11-04T00:18:59,075 Skipping link: not a file: https://www.piwheels.org/simple/aaftf/
2022-11-04T00:18:59,075 Skipping link: not a file: https://pypi.org/simple/aaftf/
2022-11-04T00:18:59,108 Given no hashes to check 1 links for project 'aaftf': discarding no candidates
2022-11-04T00:18:59,141 Collecting aaftf==0.3.4
2022-11-04T00:18:59,146   Created temporary directory: /tmp/pip-unpack-z7ljcnqw
2022-11-04T00:18:59,392   Downloading AAFTF-0.3.4.tar.gz (47 kB)
2022-11-04T00:18:59,604   Added aaftf==0.3.4 from https://files.pythonhosted.org/packages/1b/35/6a3bb933c75e05cabbbbafc9430615cad5ccf9481aae13dfafa7a32ad55f/AAFTF-0.3.4.tar.gz to build tracker '/tmp/pip-build-tracker-0xaxx6sa'
2022-11-04T00:18:59,607   Running setup.py (path:/tmp/pip-wheel-dxzsfh5c/aaftf_f31a9edec02f49e9a4b323b40df8b94a/setup.py) egg_info for package aaftf
2022-11-04T00:18:59,608   Created temporary directory: /tmp/pip-pip-egg-info-vx0xypm8
2022-11-04T00:18:59,609   Preparing metadata (setup.py): started
2022-11-04T00:18:59,611   Running command python setup.py egg_info
2022-11-04T00:19:02,021   running egg_info
2022-11-04T00:19:02,026   creating /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info
2022-11-04T00:19:02,080   writing /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/PKG-INFO
2022-11-04T00:19:02,085   writing dependency_links to /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/dependency_links.txt
2022-11-04T00:19:02,088   writing entry points to /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/entry_points.txt
2022-11-04T00:19:02,091   writing requirements to /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/requires.txt
2022-11-04T00:19:02,092   writing top-level names to /tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/top_level.txt
2022-11-04T00:19:02,095   writing manifest file '/tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/SOURCES.txt'
2022-11-04T00:19:02,269   reading manifest file '/tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/SOURCES.txt'
2022-11-04T00:19:02,272   reading manifest template 'MANIFEST.in'
2022-11-04T00:19:02,274   warning: no files found matching 'version.py'
2022-11-04T00:19:02,275   adding license file 'LICENSE'
2022-11-04T00:19:02,281   writing manifest file '/tmp/pip-pip-egg-info-vx0xypm8/AAFTF.egg-info/SOURCES.txt'
2022-11-04T00:19:02,486   Preparing metadata (setup.py): finished with status 'done'
2022-11-04T00:19:02,498   Source in /tmp/pip-wheel-dxzsfh5c/aaftf_f31a9edec02f49e9a4b323b40df8b94a has version 0.3.4, which satisfies requirement aaftf==0.3.4 from https://files.pythonhosted.org/packages/1b/35/6a3bb933c75e05cabbbbafc9430615cad5ccf9481aae13dfafa7a32ad55f/AAFTF-0.3.4.tar.gz
2022-11-04T00:19:02,499   Removed aaftf==0.3.4 from https://files.pythonhosted.org/packages/1b/35/6a3bb933c75e05cabbbbafc9430615cad5ccf9481aae13dfafa7a32ad55f/AAFTF-0.3.4.tar.gz from build tracker '/tmp/pip-build-tracker-0xaxx6sa'
2022-11-04T00:19:02,509 Created temporary directory: /tmp/pip-unpack-4wadr827
2022-11-04T00:19:02,511 Building wheels for collected packages: aaftf
2022-11-04T00:19:02,519   Created temporary directory: /tmp/pip-wheel-4j2k1x4m
2022-11-04T00:19:02,520   Building wheel for aaftf (setup.py): started
2022-11-04T00:19:02,522   Destination directory: /tmp/pip-wheel-4j2k1x4m
2022-11-04T00:19:02,523   Running command python setup.py bdist_wheel
2022-11-04T00:19:04,904   running bdist_wheel
2022-11-04T00:19:05,625   running build
2022-11-04T00:19:05,625   running build_py
2022-11-04T00:19:05,688   creating build
2022-11-04T00:19:05,688   creating build/lib
2022-11-04T00:19:05,690   creating build/lib/AAFTF
2022-11-04T00:19:05,691   copying AAFTF/__version__.py -> build/lib/AAFTF
2022-11-04T00:19:05,695   copying AAFTF/__init__.py -> build/lib/AAFTF
2022-11-04T00:19:05,698   copying AAFTF/assemble.py -> build/lib/AAFTF
2022-11-04T00:19:05,702   copying AAFTF/vecscreen.py -> build/lib/AAFTF
2022-11-04T00:19:05,707   copying AAFTF/pipeline.py -> build/lib/AAFTF
2022-11-04T00:19:05,711   copying AAFTF/rmdup.py -> build/lib/AAFTF
2022-11-04T00:19:05,715   copying AAFTF/sourpurge.py -> build/lib/AAFTF
2022-11-04T00:19:05,719   copying AAFTF/trim.py -> build/lib/AAFTF
2022-11-04T00:19:05,723   copying AAFTF/resources.py -> build/lib/AAFTF
2022-11-04T00:19:05,726   copying AAFTF/filter.py -> build/lib/AAFTF
2022-11-04T00:19:05,731   copying AAFTF/version_hardcode.py -> build/lib/AAFTF
2022-11-04T00:19:05,735   copying AAFTF/utility.py -> build/lib/AAFTF
2022-11-04T00:19:05,739   copying AAFTF/sort.py -> build/lib/AAFTF
2022-11-04T00:19:05,742   copying AAFTF/AAFTF_main.py -> build/lib/AAFTF
2022-11-04T00:19:05,748   copying AAFTF/assess.py -> build/lib/AAFTF
2022-11-04T00:19:05,752   copying AAFTF/pilon.py -> build/lib/AAFTF
2022-11-04T00:19:05,756   copying AAFTF/mito.py -> build/lib/AAFTF
2022-11-04T00:19:05,761   creating build/lib/scripts
2022-11-04T00:19:05,762   copying scripts/__init__.py -> build/lib/scripts
2022-11-04T00:19:05,765   running egg_info
2022-11-04T00:19:05,902   writing AAFTF.egg-info/PKG-INFO
2022-11-04T00:19:05,906   writing dependency_links to AAFTF.egg-info/dependency_links.txt
2022-11-04T00:19:05,910   writing entry points to AAFTF.egg-info/entry_points.txt
2022-11-04T00:19:05,912   writing requirements to AAFTF.egg-info/requires.txt
2022-11-04T00:19:05,914   writing top-level names to AAFTF.egg-info/top_level.txt
2022-11-04T00:19:05,978   reading manifest file 'AAFTF.egg-info/SOURCES.txt'
2022-11-04T00:19:05,984   reading manifest template 'MANIFEST.in'
2022-11-04T00:19:05,985   warning: no files found matching 'version.py'
2022-11-04T00:19:05,986   adding license file 'LICENSE'
2022-11-04T00:19:05,993   writing manifest file 'AAFTF.egg-info/SOURCES.txt'
2022-11-04T00:19:05,998   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'AAFTF.data' as data is deprecated, please list it in `packages`.
2022-11-04T00:19:05,999       !!


2022-11-04T00:19:06,000       ############################
2022-11-04T00:19:06,000       # Package would be ignored #
2022-11-04T00:19:06,000       ############################
2022-11-04T00:19:06,001       Python recognizes 'AAFTF.data' as an importable package,
2022-11-04T00:19:06,001       but it is not listed in the `packages` configuration of setuptools.

2022-11-04T00:19:06,002       'AAFTF.data' has been automatically added to the distribution only
2022-11-04T00:19:06,002       because it may contain data files, but this behavior is likely to change
2022-11-04T00:19:06,002       in future versions of setuptools (and therefore is considered deprecated).

2022-11-04T00:19:06,003       Please make sure that 'AAFTF.data' is included as a package by using
2022-11-04T00:19:06,003       the `packages` configuration field or the proper discovery methods
2022-11-04T00:19:06,004       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-04T00:19:06,004       instead of `find_packages(...)`/`find:`).

2022-11-04T00:19:06,004       You can read more about "package discovery" and "data files" on setuptools
2022-11-04T00:19:06,005       documentation page.


2022-11-04T00:19:06,006   !!

2022-11-04T00:19:06,006     check.warn(importable)
2022-11-04T00:19:06,007   creating build/lib/AAFTF/data
2022-11-04T00:19:06,007   copying AAFTF/data/mito-seed.fasta -> build/lib/AAFTF/data
2022-11-04T00:19:06,010   copying AAFTF/data/novoplasty-config.txt -> build/lib/AAFTF/data
2022-11-04T00:19:06,083   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-04T00:19:06,083     setuptools.SetuptoolsDeprecationWarning,
2022-11-04T00:19:06,141   installing to build/bdist.linux-armv7l/wheel
2022-11-04T00:19:06,142   running install
2022-11-04T00:19:06,202   running install_lib
2022-11-04T00:19:06,262   creating build/bdist.linux-armv7l
2022-11-04T00:19:06,263   creating build/bdist.linux-armv7l/wheel
2022-11-04T00:19:06,267   creating build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,268   copying build/lib/AAFTF/__version__.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,273   copying build/lib/AAFTF/__init__.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,276   copying build/lib/AAFTF/assemble.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,281   creating build/bdist.linux-armv7l/wheel/AAFTF/data
2022-11-04T00:19:06,283   copying build/lib/AAFTF/data/novoplasty-config.txt -> build/bdist.linux-armv7l/wheel/AAFTF/data
2022-11-04T00:19:06,286   copying build/lib/AAFTF/data/mito-seed.fasta -> build/bdist.linux-armv7l/wheel/AAFTF/data
2022-11-04T00:19:06,293   copying build/lib/AAFTF/vecscreen.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,297   copying build/lib/AAFTF/pipeline.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,301   copying build/lib/AAFTF/rmdup.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,305   copying build/lib/AAFTF/sourpurge.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,309   copying build/lib/AAFTF/trim.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,314   copying build/lib/AAFTF/resources.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,317   copying build/lib/AAFTF/filter.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,321   copying build/lib/AAFTF/version_hardcode.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,324   copying build/lib/AAFTF/utility.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,328   copying build/lib/AAFTF/sort.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,331   copying build/lib/AAFTF/AAFTF_main.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,337   copying build/lib/AAFTF/assess.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,340   copying build/lib/AAFTF/pilon.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,344   copying build/lib/AAFTF/mito.py -> build/bdist.linux-armv7l/wheel/AAFTF
2022-11-04T00:19:06,348   creating build/bdist.linux-armv7l/wheel/scripts
2022-11-04T00:19:06,350   copying build/lib/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts
2022-11-04T00:19:06,353   running install_egg_info
2022-11-04T00:19:06,419   Copying AAFTF.egg-info to build/bdist.linux-armv7l/wheel/AAFTF-0.3.4-py3.7.egg-info
2022-11-04T00:19:06,445   running install_scripts
2022-11-04T00:19:06,634   adding license file "LICENSE" (matched pattern "LICENSE")
2022-11-04T00:19:06,641   creating build/bdist.linux-armv7l/wheel/AAFTF-0.3.4.dist-info/WHEEL
2022-11-04T00:19:06,646   creating '/tmp/pip-wheel-4j2k1x4m/AAFTF-0.3.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-04T00:19:06,656   adding 'AAFTF/AAFTF_main.py'
2022-11-04T00:19:06,659   adding 'AAFTF/__init__.py'
2022-11-04T00:19:06,661   adding 'AAFTF/__version__.py'
2022-11-04T00:19:06,665   adding 'AAFTF/assemble.py'
2022-11-04T00:19:06,668   adding 'AAFTF/assess.py'
2022-11-04T00:19:06,672   adding 'AAFTF/filter.py'
2022-11-04T00:19:06,676   adding 'AAFTF/mito.py'
2022-11-04T00:19:06,680   adding 'AAFTF/pilon.py'
2022-11-04T00:19:06,684   adding 'AAFTF/pipeline.py'
2022-11-04T00:19:06,687   adding 'AAFTF/resources.py'
2022-11-04T00:19:06,691   adding 'AAFTF/rmdup.py'
2022-11-04T00:19:06,694   adding 'AAFTF/sort.py'
2022-11-04T00:19:06,697   adding 'AAFTF/sourpurge.py'
2022-11-04T00:19:06,701   adding 'AAFTF/trim.py'
2022-11-04T00:19:06,705   adding 'AAFTF/utility.py'
2022-11-04T00:19:06,711   adding 'AAFTF/vecscreen.py'
2022-11-04T00:19:06,713   adding 'AAFTF/version_hardcode.py'
2022-11-04T00:19:06,757   adding 'AAFTF/data/mito-seed.fasta'
2022-11-04T00:19:06,759   adding 'AAFTF/data/novoplasty-config.txt'
2022-11-04T00:19:06,765   adding 'scripts/__init__.py'
2022-11-04T00:19:06,767   adding 'AAFTF-0.3.4.dist-info/LICENSE'
2022-11-04T00:19:06,769   adding 'AAFTF-0.3.4.dist-info/METADATA'
2022-11-04T00:19:06,771   adding 'AAFTF-0.3.4.dist-info/WHEEL'
2022-11-04T00:19:06,772   adding 'AAFTF-0.3.4.dist-info/entry_points.txt'
2022-11-04T00:19:06,774   adding 'AAFTF-0.3.4.dist-info/top_level.txt'
2022-11-04T00:19:06,776   adding 'AAFTF-0.3.4.dist-info/RECORD'
2022-11-04T00:19:06,780   removing build/bdist.linux-armv7l/wheel
2022-11-04T00:19:07,044   Building wheel for aaftf (setup.py): finished with status 'done'
2022-11-04T00:19:07,052   Created wheel for aaftf: filename=AAFTF-0.3.4-py3-none-any.whl size=49247 sha256=0f4d1f5f060575043bf719ea6f07b0f0b9854ad40c8189d7ef87496c0044fecc
2022-11-04T00:19:07,054   Stored in directory: /tmp/pip-ephem-wheel-cache-9vpx285_/wheels/2d/49/f6/bcadfc460122671704b8842f3c1780f3219a4aeda5804bf100
2022-11-04T00:19:07,080 Successfully built aaftf
2022-11-04T00:19:07,091 Removed build tracker: '/tmp/pip-build-tracker-0xaxx6sa'