2022-11-05T06:53:46,457 Created temporary directory: /tmp/pip-ephem-wheel-cache-hd_bdgwg 2022-11-05T06:53:46,461 Created temporary directory: /tmp/pip-build-tracker-wc6w_ues 2022-11-05T06:53:46,462 Initialized build tracking at /tmp/pip-build-tracker-wc6w_ues 2022-11-05T06:53:46,462 Created build tracker: /tmp/pip-build-tracker-wc6w_ues 2022-11-05T06:53:46,463 Entered build tracker: /tmp/pip-build-tracker-wc6w_ues 2022-11-05T06:53:46,464 Created temporary directory: /tmp/pip-wheel-jnzyoa6s 2022-11-05T06:53:46,472 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-05T06:53:46,477 Created temporary directory: /tmp/pip-ephem-wheel-cache-q5ao3w7m 2022-11-05T06:53:46,535 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-05T06:53:46,542 2 location(s) to search for versions of massiveqc: 2022-11-05T06:53:46,542 * https://pypi.org/simple/massiveqc/ 2022-11-05T06:53:46,542 * https://www.piwheels.org/simple/massiveqc/ 2022-11-05T06:53:46,543 Fetching project page and analyzing links: https://pypi.org/simple/massiveqc/ 2022-11-05T06:53:46,544 Getting page https://pypi.org/simple/massiveqc/ 2022-11-05T06:53:46,548 Found index url https://pypi.org/simple 2022-11-05T06:53:46,772 Fetched page https://pypi.org/simple/massiveqc/ as application/vnd.pypi.simple.v1+json 2022-11-05T06:53:46,777 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/76/3c/44c7cf6cf95b19df52a7c769e58bca39fd19205202a60cae5a1b1dd98d9c/MassiveQC-0.0.4-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2022-11-05T06:53:46,779 Found link https://files.pythonhosted.org/packages/98/dd/74dca986376c146b84c89d05e4e4633be6b94b164322be57bdd3e7b6a679/MassiveQC-0.0.4.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.4 2022-11-05T06:53:46,779 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/5b/1f/67b5c1bb14c65cde80cc1d6ef4139346c08a31d6dd8cda8ee7ed966de825/MassiveQC-0.0.5-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2022-11-05T06:53:46,780 Found link https://files.pythonhosted.org/packages/e7/45/82b298beba981c7641d114814d5cccb76a403442cfe9e898ca136e5990ba/MassiveQC-0.0.5.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.5 2022-11-05T06:53:46,781 Skipping link: No binaries permitted for massiveqc: https://files.pythonhosted.org/packages/41/29/5dc459a0b9f4649cadeff72f4d0b87baa9c467539ab7f18be15c5deb8452/MassiveQC-0.0.6-py3-none-any.whl (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7) 2022-11-05T06:53:46,782 Found link https://files.pythonhosted.org/packages/1a/df/f44e8ada6aea50dccd18080805ff38a7a9a7a10f717c5cf87192933a5d4f/MassiveQC-0.0.6.tar.gz (from https://pypi.org/simple/massiveqc/) (requires-python:>=3.7), version: 0.0.6 2022-11-05T06:53:46,783 Fetching project page and analyzing links: https://www.piwheels.org/simple/massiveqc/ 2022-11-05T06:53:46,784 Getting page https://www.piwheels.org/simple/massiveqc/ 2022-11-05T06:53:46,786 Found index url https://www.piwheels.org/simple 2022-11-05T06:53:47,010 Fetched page https://www.piwheels.org/simple/massiveqc/ as text/html 2022-11-05T06:53:47,014 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.5-py3-none-any.whl#sha256=57e2523789434692ae5c37137b8a662c36ef63f9a72cdf5e502218d539ae582f (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2022-11-05T06:53:47,015 Skipping link: No binaries permitted for massiveqc: https://www.piwheels.org/simple/massiveqc/MassiveQC-0.0.4-py3-none-any.whl#sha256=384118cbc59ca7fb070ebb2efc5f572908fc6c0a99b1ec43937024d607e80ae5 (from https://www.piwheels.org/simple/massiveqc/) (requires-python:>=3.7) 2022-11-05T06:53:47,015 Skipping link: not a file: https://www.piwheels.org/simple/massiveqc/ 2022-11-05T06:53:47,016 Skipping link: not a file: https://pypi.org/simple/massiveqc/ 2022-11-05T06:53:47,049 Given no hashes to check 1 links for project 'massiveqc': discarding no candidates 2022-11-05T06:53:47,082 Collecting massiveqc==0.0.6 2022-11-05T06:53:47,087 Created temporary directory: /tmp/pip-unpack-dzbvu5ah 2022-11-05T06:53:47,334 Downloading MassiveQC-0.0.6.tar.gz (29 kB) 2022-11-05T06:53:47,498 Added massiveqc==0.0.6 from https://files.pythonhosted.org/packages/1a/df/f44e8ada6aea50dccd18080805ff38a7a9a7a10f717c5cf87192933a5d4f/MassiveQC-0.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-wc6w_ues' 2022-11-05T06:53:47,501 Running setup.py (path:/tmp/pip-wheel-jnzyoa6s/massiveqc_59efda554b0f4d998e45764f21437212/setup.py) egg_info for package massiveqc 2022-11-05T06:53:47,502 Created temporary directory: /tmp/pip-pip-egg-info-nn9ghia3 2022-11-05T06:53:47,503 Preparing metadata (setup.py): started 2022-11-05T06:53:47,505 Running command python setup.py egg_info 2022-11-05T06:53:49,997 running egg_info 2022-11-05T06:53:50,001 creating /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info 2022-11-05T06:53:50,061 writing /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/PKG-INFO 2022-11-05T06:53:50,066 writing dependency_links to /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/dependency_links.txt 2022-11-05T06:53:50,070 writing entry points to /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/entry_points.txt 2022-11-05T06:53:50,072 writing requirements to /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/requires.txt 2022-11-05T06:53:50,074 writing top-level names to /tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/top_level.txt 2022-11-05T06:53:50,077 writing manifest file '/tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/SOURCES.txt' 2022-11-05T06:53:50,266 reading manifest file '/tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/SOURCES.txt' 2022-11-05T06:53:50,275 writing manifest file '/tmp/pip-pip-egg-info-nn9ghia3/MassiveQC.egg-info/SOURCES.txt' 2022-11-05T06:53:50,480 Preparing metadata (setup.py): finished with status 'done' 2022-11-05T06:53:50,495 Source in /tmp/pip-wheel-jnzyoa6s/massiveqc_59efda554b0f4d998e45764f21437212 has version 0.0.6, which satisfies requirement massiveqc==0.0.6 from https://files.pythonhosted.org/packages/1a/df/f44e8ada6aea50dccd18080805ff38a7a9a7a10f717c5cf87192933a5d4f/MassiveQC-0.0.6.tar.gz 2022-11-05T06:53:50,497 Removed massiveqc==0.0.6 from https://files.pythonhosted.org/packages/1a/df/f44e8ada6aea50dccd18080805ff38a7a9a7a10f717c5cf87192933a5d4f/MassiveQC-0.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-wc6w_ues' 2022-11-05T06:53:50,513 Created temporary directory: /tmp/pip-unpack-r5xjr4t9 2022-11-05T06:53:50,515 Building wheels for collected packages: massiveqc 2022-11-05T06:53:50,524 Created temporary directory: /tmp/pip-wheel-v67qryvd 2022-11-05T06:53:50,525 Building wheel for massiveqc (setup.py): started 2022-11-05T06:53:50,527 Destination directory: /tmp/pip-wheel-v67qryvd 2022-11-05T06:53:50,527 Running command python setup.py bdist_wheel 2022-11-05T06:53:53,019 running bdist_wheel 2022-11-05T06:53:53,819 running build 2022-11-05T06:53:53,820 running build_py 2022-11-05T06:53:53,894 creating build 2022-11-05T06:53:53,895 creating build/lib 2022-11-05T06:53:53,896 creating build/lib/MassiveQC 2022-11-05T06:53:53,898 copying MassiveQC/parser.py -> build/lib/MassiveQC 2022-11-05T06:53:53,903 copying MassiveQC/atropos.py -> build/lib/MassiveQC 2022-11-05T06:53:53,907 copying MassiveQC/__init__.py -> build/lib/MassiveQC 2022-11-05T06:53:53,909 copying MassiveQC/plot.py -> build/lib/MassiveQC 2022-11-05T06:53:53,913 copying MassiveQC/get_sra.py -> build/lib/MassiveQC 2022-11-05T06:53:53,916 copying MassiveQC/MultiProcess.py -> build/lib/MassiveQC 2022-11-05T06:53:53,920 copying MassiveQC/SingleProcess.py -> build/lib/MassiveQC 2022-11-05T06:53:53,925 copying MassiveQC/build_features.py -> build/lib/MassiveQC 2022-11-05T06:53:53,928 copying MassiveQC/command.py -> build/lib/MassiveQC 2022-11-05T06:53:53,932 copying MassiveQC/markduplicates.py -> build/lib/MassiveQC 2022-11-05T06:53:53,936 copying MassiveQC/collectrnaseqmetrics.py -> build/lib/MassiveQC 2022-11-05T06:53:53,939 copying MassiveQC/check_fq.py -> build/lib/MassiveQC 2022-11-05T06:53:53,944 copying MassiveQC/fastq_screen.py -> build/lib/MassiveQC 2022-11-05T06:53:53,947 copying MassiveQC/feature_store.py -> build/lib/MassiveQC 2022-11-05T06:53:53,951 copying MassiveQC/FeatureCounts.py -> build/lib/MassiveQC 2022-11-05T06:53:53,954 copying MassiveQC/hisat2.py -> build/lib/MassiveQC 2022-11-05T06:53:53,959 copying MassiveQC/fastq.py -> build/lib/MassiveQC 2022-11-05T06:53:53,963 copying MassiveQC/iforest.py -> build/lib/MassiveQC 2022-11-05T06:53:53,967 copying MassiveQC/IsoDetect.py -> build/lib/MassiveQC 2022-11-05T06:53:53,970 copying MassiveQC/detection.py -> build/lib/MassiveQC 2022-11-05T06:53:54,047 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-05T06:53:54,048 setuptools.SetuptoolsDeprecationWarning, 2022-11-05T06:53:54,111 installing to build/bdist.linux-armv7l/wheel 2022-11-05T06:53:54,112 running install 2022-11-05T06:53:54,173 running install_lib 2022-11-05T06:53:54,239 creating build/bdist.linux-armv7l 2022-11-05T06:53:54,240 creating build/bdist.linux-armv7l/wheel 2022-11-05T06:53:54,243 creating build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,245 copying build/lib/MassiveQC/parser.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,250 copying build/lib/MassiveQC/atropos.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,254 copying build/lib/MassiveQC/__init__.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,256 copying build/lib/MassiveQC/plot.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,260 copying build/lib/MassiveQC/get_sra.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,264 copying build/lib/MassiveQC/MultiProcess.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,268 copying build/lib/MassiveQC/SingleProcess.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,272 copying build/lib/MassiveQC/build_features.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,276 copying build/lib/MassiveQC/command.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,280 copying build/lib/MassiveQC/markduplicates.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,283 copying build/lib/MassiveQC/collectrnaseqmetrics.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,287 copying build/lib/MassiveQC/check_fq.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,291 copying build/lib/MassiveQC/fastq_screen.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,295 copying build/lib/MassiveQC/feature_store.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,298 copying build/lib/MassiveQC/FeatureCounts.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,302 copying build/lib/MassiveQC/hisat2.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,306 copying build/lib/MassiveQC/fastq.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,310 copying build/lib/MassiveQC/iforest.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,315 copying build/lib/MassiveQC/IsoDetect.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,318 copying build/lib/MassiveQC/detection.py -> build/bdist.linux-armv7l/wheel/MassiveQC 2022-11-05T06:53:54,320 running install_egg_info 2022-11-05T06:53:54,554 running egg_info 2022-11-05T06:53:54,614 writing MassiveQC.egg-info/PKG-INFO 2022-11-05T06:53:54,618 writing dependency_links to MassiveQC.egg-info/dependency_links.txt 2022-11-05T06:53:54,622 writing entry points to MassiveQC.egg-info/entry_points.txt 2022-11-05T06:53:54,625 writing requirements to MassiveQC.egg-info/requires.txt 2022-11-05T06:53:54,627 writing top-level names to MassiveQC.egg-info/top_level.txt 2022-11-05T06:53:54,695 reading manifest file 'MassiveQC.egg-info/SOURCES.txt' 2022-11-05T06:53:54,706 writing manifest file 'MassiveQC.egg-info/SOURCES.txt' 2022-11-05T06:53:54,709 Copying MassiveQC.egg-info to build/bdist.linux-armv7l/wheel/MassiveQC-0.0.6-py3.7.egg-info 2022-11-05T06:53:54,732 running install_scripts 2022-11-05T06:53:54,903 creating build/bdist.linux-armv7l/wheel/MassiveQC-0.0.6.dist-info/WHEEL 2022-11-05T06:53:54,908 creating '/tmp/pip-wheel-v67qryvd/MassiveQC-0.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-05T06:53:54,913 adding 'MassiveQC/FeatureCounts.py' 2022-11-05T06:53:54,916 adding 'MassiveQC/IsoDetect.py' 2022-11-05T06:53:54,920 adding 'MassiveQC/MultiProcess.py' 2022-11-05T06:53:54,923 adding 'MassiveQC/SingleProcess.py' 2022-11-05T06:53:54,925 adding 'MassiveQC/__init__.py' 2022-11-05T06:53:54,928 adding 'MassiveQC/atropos.py' 2022-11-05T06:53:54,931 adding 'MassiveQC/build_features.py' 2022-11-05T06:53:54,935 adding 'MassiveQC/check_fq.py' 2022-11-05T06:53:54,937 adding 'MassiveQC/collectrnaseqmetrics.py' 2022-11-05T06:53:54,940 adding 'MassiveQC/command.py' 2022-11-05T06:53:54,942 adding 'MassiveQC/detection.py' 2022-11-05T06:53:54,946 adding 'MassiveQC/fastq.py' 2022-11-05T06:53:54,949 adding 'MassiveQC/fastq_screen.py' 2022-11-05T06:53:54,952 adding 'MassiveQC/feature_store.py' 2022-11-05T06:53:54,955 adding 'MassiveQC/get_sra.py' 2022-11-05T06:53:54,959 adding 'MassiveQC/hisat2.py' 2022-11-05T06:53:54,962 adding 'MassiveQC/iforest.py' 2022-11-05T06:53:54,965 adding 'MassiveQC/markduplicates.py' 2022-11-05T06:53:54,968 adding 'MassiveQC/parser.py' 2022-11-05T06:53:54,971 adding 'MassiveQC/plot.py' 2022-11-05T06:53:54,977 adding 'MassiveQC-0.0.6.dist-info/METADATA' 2022-11-05T06:53:54,979 adding 'MassiveQC-0.0.6.dist-info/WHEEL' 2022-11-05T06:53:54,980 adding 'MassiveQC-0.0.6.dist-info/entry_points.txt' 2022-11-05T06:53:54,982 adding 'MassiveQC-0.0.6.dist-info/top_level.txt' 2022-11-05T06:53:54,984 adding 'MassiveQC-0.0.6.dist-info/RECORD' 2022-11-05T06:53:54,988 removing build/bdist.linux-armv7l/wheel 2022-11-05T06:53:55,243 Building wheel for massiveqc (setup.py): finished with status 'done' 2022-11-05T06:53:55,251 Created wheel for massiveqc: filename=MassiveQC-0.0.6-py3-none-any.whl size=37395 sha256=d88d6fcaf7fd2918a7d2fad1a72a2c2dabc1d61119bcc592f8738b72c47e35d5 2022-11-05T06:53:55,253 Stored in directory: /tmp/pip-ephem-wheel-cache-q5ao3w7m/wheels/d6/7c/e4/6340b806b461fcfb7c3f45091f12f0ff2ebeb66883d0250a50 2022-11-05T06:53:55,283 Successfully built massiveqc 2022-11-05T06:53:55,294 Removed build tracker: '/tmp/pip-build-tracker-wc6w_ues'