2022-11-08T10:54:55,729 Created temporary directory: /tmp/pip-ephem-wheel-cache-r24dmq95 2022-11-08T10:54:55,733 Created temporary directory: /tmp/pip-build-tracker-eor1n0z2 2022-11-08T10:54:55,734 Initialized build tracking at /tmp/pip-build-tracker-eor1n0z2 2022-11-08T10:54:55,734 Created build tracker: /tmp/pip-build-tracker-eor1n0z2 2022-11-08T10:54:55,735 Entered build tracker: /tmp/pip-build-tracker-eor1n0z2 2022-11-08T10:54:55,736 Created temporary directory: /tmp/pip-wheel-_j6zocw8 2022-11-08T10:54:55,744 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-08T10:54:55,749 Created temporary directory: /tmp/pip-ephem-wheel-cache-yf3sgwxs 2022-11-08T10:54:55,804 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-08T10:54:55,812 2 location(s) to search for versions of mqhandler: 2022-11-08T10:54:55,812 * https://pypi.org/simple/mqhandler/ 2022-11-08T10:54:55,812 * https://www.piwheels.org/simple/mqhandler/ 2022-11-08T10:54:55,813 Fetching project page and analyzing links: https://pypi.org/simple/mqhandler/ 2022-11-08T10:54:55,814 Getting page https://pypi.org/simple/mqhandler/ 2022-11-08T10:54:55,817 Found index url https://pypi.org/simple 2022-11-08T10:54:56,046 Fetched page https://pypi.org/simple/mqhandler/ as application/vnd.pypi.simple.v1+json 2022-11-08T10:54:56,052 Found link https://files.pythonhosted.org/packages/22/6e/7c17adfbba634afc3ed7f8a07d5890afc12090f1744d31e4cc4a419a5594/mqhandler-0.0.10.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.10 2022-11-08T10:54:56,053 Found link https://files.pythonhosted.org/packages/ec/02/4d78bf30e679c490f41e508283ed8f139d3fd69be30d757e4a4dcfaa9eed/mqhandler-0.0.11.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.11 2022-11-08T10:54:56,055 Found link https://files.pythonhosted.org/packages/46/4a/d7102ca4f9d2649b4c1df481ed0a9bc62ce7f33500bc7140ef18d8ffa0c2/mqhandler-0.0.12.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.12 2022-11-08T10:54:56,056 Found link https://files.pythonhosted.org/packages/33/26/68016c0e44f8a4b2138238cff4f2edf5ab4ea17cdf1058a178b6a539f878/mqhandler-0.0.14.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.14 2022-11-08T10:54:56,057 Found link https://files.pythonhosted.org/packages/1e/00/98dc7db584ca99c3e55ef33ca71fd989ae7ff28bf0289d3ecf954fc793cc/mqhandler-0.0.15.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.15 2022-11-08T10:54:56,059 Found link https://files.pythonhosted.org/packages/46/ea/cfe010d486d2690f606c5d40060d163c896d424cfce084f44ba754867de2/mqhandler-0.0.19.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.19 2022-11-08T10:54:56,060 Fetching project page and analyzing links: https://www.piwheels.org/simple/mqhandler/ 2022-11-08T10:54:56,060 Getting page https://www.piwheels.org/simple/mqhandler/ 2022-11-08T10:54:56,062 Found index url https://www.piwheels.org/simple 2022-11-08T10:54:56,314 Fetched page https://www.piwheels.org/simple/mqhandler/ as text/html 2022-11-08T10:54:56,321 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.15-py3-none-any.whl#sha256=0dae40a095fffc50f28ada70a33e4f61b3d38db0551f5e6492194eac9551fde8 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-08T10:54:56,321 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.14-py3-none-any.whl#sha256=ed12db566b2cdb978f2cf94ca51913ba359b3c7155e212fd87c28cc89d43c2e2 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-08T10:54:56,322 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.12-py3-none-any.whl#sha256=3d209172edee390b69fb8a8c6668f521ead2761bc4a783d17e20b9bd4cc802c0 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-08T10:54:56,322 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.11-py3-none-any.whl#sha256=86c8e476f1432b680945f0110dc2731139e65d9414ec09f340c08950bfb1acfa (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-08T10:54:56,323 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.10-py3-none-any.whl#sha256=70ae5dad74736e7d907692c7ccb8b40036f75c9a391034e8938b8f3dfd9f865c (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-08T10:54:56,323 Skipping link: not a file: https://www.piwheels.org/simple/mqhandler/ 2022-11-08T10:54:56,324 Skipping link: not a file: https://pypi.org/simple/mqhandler/ 2022-11-08T10:54:56,362 Given no hashes to check 1 links for project 'mqhandler': discarding no candidates 2022-11-08T10:54:56,391 Collecting mqhandler==0.0.19 2022-11-08T10:54:56,396 Created temporary directory: /tmp/pip-unpack-yj2_h672 2022-11-08T10:54:56,941 Downloading mqhandler-0.0.19.tar.gz (374 kB) 2022-11-08T10:54:57,375 Added mqhandler==0.0.19 from https://files.pythonhosted.org/packages/46/ea/cfe010d486d2690f606c5d40060d163c896d424cfce084f44ba754867de2/mqhandler-0.0.19.tar.gz to build tracker '/tmp/pip-build-tracker-eor1n0z2' 2022-11-08T10:54:57,378 Running setup.py (path:/tmp/pip-wheel-_j6zocw8/mqhandler_23313f021c63463ba02e796f471607bb/setup.py) egg_info for package mqhandler 2022-11-08T10:54:57,379 Created temporary directory: /tmp/pip-pip-egg-info-4kcnsb_e 2022-11-08T10:54:57,380 Preparing metadata (setup.py): started 2022-11-08T10:54:57,382 Running command python setup.py egg_info 2022-11-08T10:54:59,891 running egg_info 2022-11-08T10:54:59,895 creating /tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info 2022-11-08T10:54:59,955 writing /tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/PKG-INFO 2022-11-08T10:54:59,959 writing dependency_links to /tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/dependency_links.txt 2022-11-08T10:54:59,963 writing requirements to /tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/requires.txt 2022-11-08T10:54:59,965 writing top-level names to /tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/top_level.txt 2022-11-08T10:54:59,967 writing manifest file '/tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/SOURCES.txt' 2022-11-08T10:55:00,156 reading manifest file '/tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/SOURCES.txt' 2022-11-08T10:55:00,159 reading manifest template 'MANIFEST.in' 2022-11-08T10:55:00,165 adding license file 'LICENSE' 2022-11-08T10:55:00,170 writing manifest file '/tmp/pip-pip-egg-info-4kcnsb_e/mqhandler.egg-info/SOURCES.txt' 2022-11-08T10:55:00,374 Preparing metadata (setup.py): finished with status 'done' 2022-11-08T10:55:00,388 Source in /tmp/pip-wheel-_j6zocw8/mqhandler_23313f021c63463ba02e796f471607bb has version 0.0.19, which satisfies requirement mqhandler==0.0.19 from https://files.pythonhosted.org/packages/46/ea/cfe010d486d2690f606c5d40060d163c896d424cfce084f44ba754867de2/mqhandler-0.0.19.tar.gz 2022-11-08T10:55:00,390 Removed mqhandler==0.0.19 from https://files.pythonhosted.org/packages/46/ea/cfe010d486d2690f606c5d40060d163c896d424cfce084f44ba754867de2/mqhandler-0.0.19.tar.gz from build tracker '/tmp/pip-build-tracker-eor1n0z2' 2022-11-08T10:55:00,405 Created temporary directory: /tmp/pip-unpack-a_wiy_l7 2022-11-08T10:55:00,406 Building wheels for collected packages: mqhandler 2022-11-08T10:55:00,415 Created temporary directory: /tmp/pip-wheel-0p6d_jdu 2022-11-08T10:55:00,416 Building wheel for mqhandler (setup.py): started 2022-11-08T10:55:00,418 Destination directory: /tmp/pip-wheel-0p6d_jdu 2022-11-08T10:55:00,418 Running command python setup.py bdist_wheel 2022-11-08T10:55:02,871 running bdist_wheel 2022-11-08T10:55:03,613 running build 2022-11-08T10:55:03,613 running build_py 2022-11-08T10:55:03,681 creating build 2022-11-08T10:55:03,681 creating build/lib 2022-11-08T10:55:03,682 creating build/lib/mqhandler 2022-11-08T10:55:03,684 copying mqhandler/fasta_grepper.py -> build/lib/mqhandler 2022-11-08T10:55:03,688 copying mqhandler/map_orthologs.py -> build/lib/mqhandler 2022-11-08T10:55:03,692 copying mqhandler/test_file_reduce_genenames.py -> build/lib/mqhandler 2022-11-08T10:55:03,695 copying mqhandler/filter_ids.py -> build/lib/mqhandler 2022-11-08T10:55:03,699 copying mqhandler/remap_genenames.py -> build/lib/mqhandler 2022-11-08T10:55:03,702 copying mqhandler/__init__.py -> build/lib/mqhandler 2022-11-08T10:55:03,705 copying mqhandler/reduce_genenames.py -> build/lib/mqhandler 2022-11-08T10:55:03,709 copying mqhandler/test_file_filter_ids.py -> build/lib/mqhandler 2022-11-08T10:55:03,713 creating build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,715 copying mqhandler/mq_utils/HGNC_mapping.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,719 copying mqhandler/mq_utils/mapping_handler.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,723 copying mqhandler/mq_utils/plotting.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,726 copying mqhandler/mq_utils/logger.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,730 copying mqhandler/mq_utils/__init__.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,733 copying mqhandler/mq_utils/runner_utils.py -> build/lib/mqhandler/mq_utils 2022-11-08T10:55:03,736 running egg_info 2022-11-08T10:55:03,878 writing mqhandler.egg-info/PKG-INFO 2022-11-08T10:55:03,882 writing dependency_links to mqhandler.egg-info/dependency_links.txt 2022-11-08T10:55:03,886 writing requirements to mqhandler.egg-info/requires.txt 2022-11-08T10:55:03,888 writing top-level names to mqhandler.egg-info/top_level.txt 2022-11-08T10:55:03,954 reading manifest file 'mqhandler.egg-info/SOURCES.txt' 2022-11-08T10:55:03,959 reading manifest template 'MANIFEST.in' 2022-11-08T10:55:03,964 adding license file 'LICENSE' 2022-11-08T10:55:03,971 writing manifest file 'mqhandler.egg-info/SOURCES.txt' 2022-11-08T10:55:03,976 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'mqhandler.mappings' as data is deprecated, please list it in `packages`. 2022-11-08T10:55:03,976 !! 2022-11-08T10:55:03,977 ############################ 2022-11-08T10:55:03,977 # Package would be ignored # 2022-11-08T10:55:03,978 ############################ 2022-11-08T10:55:03,978 Python recognizes 'mqhandler.mappings' as an importable package, 2022-11-08T10:55:03,978 but it is not listed in the `packages` configuration of setuptools. 2022-11-08T10:55:03,979 'mqhandler.mappings' has been automatically added to the distribution only 2022-11-08T10:55:03,979 because it may contain data files, but this behavior is likely to change 2022-11-08T10:55:03,980 in future versions of setuptools (and therefore is considered deprecated). 2022-11-08T10:55:03,980 Please make sure that 'mqhandler.mappings' is included as a package by using 2022-11-08T10:55:03,981 the `packages` configuration field or the proper discovery methods 2022-11-08T10:55:03,981 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-08T10:55:03,981 instead of `find_packages(...)`/`find:`). 2022-11-08T10:55:03,982 You can read more about "package discovery" and "data files" on setuptools 2022-11-08T10:55:03,982 documentation page. 2022-11-08T10:55:03,983 !! 2022-11-08T10:55:03,984 check.warn(importable) 2022-11-08T10:55:03,984 creating build/lib/mqhandler/mappings 2022-11-08T10:55:03,984 copying mqhandler/mappings/genenames_to_orthologs.csv -> build/lib/mqhandler/mappings 2022-11-08T10:55:04,012 copying mqhandler/mappings/genenames_to_protein.csv -> build/lib/mqhandler/mappings 2022-11-08T10:55:04,015 copying mqhandler/mappings/genenames_to_reduced_genenames.csv -> build/lib/mqhandler/mappings 2022-11-08T10:55:04,030 copying mqhandler/mappings/protein_to_genenames.csv -> build/lib/mqhandler/mappings 2022-11-08T10:55:04,148 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-08T10:55:04,148 setuptools.SetuptoolsDeprecationWarning, 2022-11-08T10:55:04,210 installing to build/bdist.linux-armv7l/wheel 2022-11-08T10:55:04,211 running install 2022-11-08T10:55:04,274 running install_lib 2022-11-08T10:55:04,339 creating build/bdist.linux-armv7l 2022-11-08T10:55:04,340 creating build/bdist.linux-armv7l/wheel 2022-11-08T10:55:04,343 creating build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,345 copying build/lib/mqhandler/fasta_grepper.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,349 copying build/lib/mqhandler/map_orthologs.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,353 copying build/lib/mqhandler/test_file_reduce_genenames.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,356 copying build/lib/mqhandler/filter_ids.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,359 copying build/lib/mqhandler/remap_genenames.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,364 copying build/lib/mqhandler/__init__.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,367 copying build/lib/mqhandler/reduce_genenames.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,371 copying build/lib/mqhandler/test_file_filter_ids.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-08T10:55:04,375 creating build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,377 copying build/lib/mqhandler/mq_utils/HGNC_mapping.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,380 copying build/lib/mqhandler/mq_utils/mapping_handler.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,385 copying build/lib/mqhandler/mq_utils/plotting.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,389 copying build/lib/mqhandler/mq_utils/logger.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,392 copying build/lib/mqhandler/mq_utils/__init__.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,396 copying build/lib/mqhandler/mq_utils/runner_utils.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-08T10:55:04,401 creating build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-08T10:55:04,402 copying build/lib/mqhandler/mappings/protein_to_genenames.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-08T10:55:04,443 copying build/lib/mqhandler/mappings/genenames_to_orthologs.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-08T10:55:04,472 copying build/lib/mqhandler/mappings/genenames_to_reduced_genenames.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-08T10:55:04,486 copying build/lib/mqhandler/mappings/genenames_to_protein.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-08T10:55:04,490 running install_egg_info 2022-11-08T10:55:04,564 Copying mqhandler.egg-info to build/bdist.linux-armv7l/wheel/mqhandler-0.0.19-py3.7.egg-info 2022-11-08T10:55:04,584 running install_scripts 2022-11-08T10:55:04,786 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-08T10:55:04,796 creating build/bdist.linux-armv7l/wheel/mqhandler-0.0.19.dist-info/WHEEL 2022-11-08T10:55:04,800 creating '/tmp/pip-wheel-0p6d_jdu/mqhandler-0.0.19-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-08T10:55:04,804 adding 'mqhandler/__init__.py' 2022-11-08T10:55:04,807 adding 'mqhandler/fasta_grepper.py' 2022-11-08T10:55:04,810 adding 'mqhandler/filter_ids.py' 2022-11-08T10:55:04,813 adding 'mqhandler/map_orthologs.py' 2022-11-08T10:55:04,815 adding 'mqhandler/reduce_genenames.py' 2022-11-08T10:55:04,819 adding 'mqhandler/remap_genenames.py' 2022-11-08T10:55:04,821 adding 'mqhandler/test_file_filter_ids.py' 2022-11-08T10:55:04,823 adding 'mqhandler/test_file_reduce_genenames.py' 2022-11-08T10:55:04,962 adding 'mqhandler/mappings/genenames_to_orthologs.csv' 2022-11-08T10:55:04,975 adding 'mqhandler/mappings/genenames_to_protein.csv' 2022-11-08T10:55:05,031 adding 'mqhandler/mappings/genenames_to_reduced_genenames.csv' 2022-11-08T10:55:05,188 adding 'mqhandler/mappings/protein_to_genenames.csv' 2022-11-08T10:55:05,209 adding 'mqhandler/mq_utils/HGNC_mapping.py' 2022-11-08T10:55:05,211 adding 'mqhandler/mq_utils/__init__.py' 2022-11-08T10:55:05,214 adding 'mqhandler/mq_utils/logger.py' 2022-11-08T10:55:05,218 adding 'mqhandler/mq_utils/mapping_handler.py' 2022-11-08T10:55:05,221 adding 'mqhandler/mq_utils/plotting.py' 2022-11-08T10:55:05,224 adding 'mqhandler/mq_utils/runner_utils.py' 2022-11-08T10:55:05,241 adding 'mqhandler-0.0.19.dist-info/LICENSE' 2022-11-08T10:55:05,244 adding 'mqhandler-0.0.19.dist-info/METADATA' 2022-11-08T10:55:05,246 adding 'mqhandler-0.0.19.dist-info/WHEEL' 2022-11-08T10:55:05,247 adding 'mqhandler-0.0.19.dist-info/top_level.txt' 2022-11-08T10:55:05,249 adding 'mqhandler-0.0.19.dist-info/RECORD' 2022-11-08T10:55:05,265 removing build/bdist.linux-armv7l/wheel 2022-11-08T10:55:05,528 Building wheel for mqhandler (setup.py): finished with status 'done' 2022-11-08T10:55:05,547 Created wheel for mqhandler: filename=mqhandler-0.0.19-py3-none-any.whl size=386258 sha256=d3ee2aed68e6b1a187c4aae7ac6466ab8d0ce6f533d8a2008977aae7464bb17f 2022-11-08T10:55:05,549 Stored in directory: /tmp/pip-ephem-wheel-cache-yf3sgwxs/wheels/76/57/b4/337efdedd98e123542cc8df6db35e89e29ba0b0a618bf5078e 2022-11-08T10:55:05,580 Successfully built mqhandler 2022-11-08T10:55:05,615 Removed build tracker: '/tmp/pip-build-tracker-eor1n0z2'