2022-11-10T18:02:02,239 Created temporary directory: /tmp/pip-ephem-wheel-cache-0z54_si3 2022-11-10T18:02:02,243 Created temporary directory: /tmp/pip-build-tracker-11mbjsld 2022-11-10T18:02:02,244 Initialized build tracking at /tmp/pip-build-tracker-11mbjsld 2022-11-10T18:02:02,244 Created build tracker: /tmp/pip-build-tracker-11mbjsld 2022-11-10T18:02:02,245 Entered build tracker: /tmp/pip-build-tracker-11mbjsld 2022-11-10T18:02:02,246 Created temporary directory: /tmp/pip-wheel-1he5lun6 2022-11-10T18:02:02,254 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-10T18:02:02,259 Created temporary directory: /tmp/pip-ephem-wheel-cache-85_2jgkr 2022-11-10T18:02:02,309 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-10T18:02:02,315 2 location(s) to search for versions of mqhandler: 2022-11-10T18:02:02,315 * https://pypi.org/simple/mqhandler/ 2022-11-10T18:02:02,315 * https://www.piwheels.org/simple/mqhandler/ 2022-11-10T18:02:02,317 Fetching project page and analyzing links: https://pypi.org/simple/mqhandler/ 2022-11-10T18:02:02,317 Getting page https://pypi.org/simple/mqhandler/ 2022-11-10T18:02:02,321 Found index url https://pypi.org/simple 2022-11-10T18:02:02,530 Fetched page https://pypi.org/simple/mqhandler/ as application/vnd.pypi.simple.v1+json 2022-11-10T18:02:02,536 Found link https://files.pythonhosted.org/packages/22/6e/7c17adfbba634afc3ed7f8a07d5890afc12090f1744d31e4cc4a419a5594/mqhandler-0.0.10.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.10 2022-11-10T18:02:02,537 Found link https://files.pythonhosted.org/packages/ec/02/4d78bf30e679c490f41e508283ed8f139d3fd69be30d757e4a4dcfaa9eed/mqhandler-0.0.11.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.11 2022-11-10T18:02:02,539 Found link https://files.pythonhosted.org/packages/46/4a/d7102ca4f9d2649b4c1df481ed0a9bc62ce7f33500bc7140ef18d8ffa0c2/mqhandler-0.0.12.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.12 2022-11-10T18:02:02,540 Found link https://files.pythonhosted.org/packages/33/26/68016c0e44f8a4b2138238cff4f2edf5ab4ea17cdf1058a178b6a539f878/mqhandler-0.0.14.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.14 2022-11-10T18:02:02,542 Found link https://files.pythonhosted.org/packages/1e/00/98dc7db584ca99c3e55ef33ca71fd989ae7ff28bf0289d3ecf954fc793cc/mqhandler-0.0.15.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.15 2022-11-10T18:02:02,543 Found link https://files.pythonhosted.org/packages/46/ea/cfe010d486d2690f606c5d40060d163c896d424cfce084f44ba754867de2/mqhandler-0.0.19.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.19 2022-11-10T18:02:02,545 Found link https://files.pythonhosted.org/packages/fe/20/065d774abdf41558f35c1ffe712c928e0ad6bcee69d501fc5789a74cdf36/mqhandler-0.0.20.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.20 2022-11-10T18:02:02,546 Found link https://files.pythonhosted.org/packages/84/e0/023d925dfc98468f08260893d6d5ad3568228da38310a272e77abcd84a10/mqhandler-0.0.21.tar.gz (from https://pypi.org/simple/mqhandler/) (requires-python:>=3.7), version: 0.0.21 2022-11-10T18:02:02,547 Fetching project page and analyzing links: https://www.piwheels.org/simple/mqhandler/ 2022-11-10T18:02:02,547 Getting page https://www.piwheels.org/simple/mqhandler/ 2022-11-10T18:02:02,550 Found index url https://www.piwheels.org/simple 2022-11-10T18:02:02,765 Fetched page https://www.piwheels.org/simple/mqhandler/ as text/html 2022-11-10T18:02:02,772 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.20-py3-none-any.whl#sha256=db8f34fadd821374119e6f01b5db8b90c94fc8a7e77b2bff6d3f802e55b1fb75 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,773 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.19-py3-none-any.whl#sha256=d3ee2aed68e6b1a187c4aae7ac6466ab8d0ce6f533d8a2008977aae7464bb17f (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,773 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.15-py3-none-any.whl#sha256=0dae40a095fffc50f28ada70a33e4f61b3d38db0551f5e6492194eac9551fde8 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,774 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.14-py3-none-any.whl#sha256=ed12db566b2cdb978f2cf94ca51913ba359b3c7155e212fd87c28cc89d43c2e2 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,774 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.12-py3-none-any.whl#sha256=3d209172edee390b69fb8a8c6668f521ead2761bc4a783d17e20b9bd4cc802c0 (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,775 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.11-py3-none-any.whl#sha256=86c8e476f1432b680945f0110dc2731139e65d9414ec09f340c08950bfb1acfa (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,775 Skipping link: No binaries permitted for mqhandler: https://www.piwheels.org/simple/mqhandler/mqhandler-0.0.10-py3-none-any.whl#sha256=70ae5dad74736e7d907692c7ccb8b40036f75c9a391034e8938b8f3dfd9f865c (from https://www.piwheels.org/simple/mqhandler/) (requires-python:>=3.7) 2022-11-10T18:02:02,776 Skipping link: not a file: https://www.piwheels.org/simple/mqhandler/ 2022-11-10T18:02:02,776 Skipping link: not a file: https://pypi.org/simple/mqhandler/ 2022-11-10T18:02:02,811 Given no hashes to check 1 links for project 'mqhandler': discarding no candidates 2022-11-10T18:02:02,841 Collecting mqhandler==0.0.21 2022-11-10T18:02:02,846 Created temporary directory: /tmp/pip-unpack-nffcjm17 2022-11-10T18:02:03,247 Downloading mqhandler-0.0.21.tar.gz (758 kB) 2022-11-10T18:02:03,913 Added mqhandler==0.0.21 from https://files.pythonhosted.org/packages/84/e0/023d925dfc98468f08260893d6d5ad3568228da38310a272e77abcd84a10/mqhandler-0.0.21.tar.gz to build tracker '/tmp/pip-build-tracker-11mbjsld' 2022-11-10T18:02:03,916 Running setup.py (path:/tmp/pip-wheel-1he5lun6/mqhandler_bbe6b8ef2fcf4a2b8492d82739dacc65/setup.py) egg_info for package mqhandler 2022-11-10T18:02:03,917 Created temporary directory: /tmp/pip-pip-egg-info-bapjprti 2022-11-10T18:02:03,918 Preparing metadata (setup.py): started 2022-11-10T18:02:03,920 Running command python setup.py egg_info 2022-11-10T18:02:06,776 running egg_info 2022-11-10T18:02:06,781 creating /tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info 2022-11-10T18:02:06,871 writing /tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/PKG-INFO 2022-11-10T18:02:06,875 writing dependency_links to /tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/dependency_links.txt 2022-11-10T18:02:06,880 writing requirements to /tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/requires.txt 2022-11-10T18:02:06,882 writing top-level names to /tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/top_level.txt 2022-11-10T18:02:06,884 writing manifest file '/tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/SOURCES.txt' 2022-11-10T18:02:07,161 reading manifest file '/tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/SOURCES.txt' 2022-11-10T18:02:07,165 reading manifest template 'MANIFEST.in' 2022-11-10T18:02:07,171 adding license file 'LICENSE' 2022-11-10T18:02:07,177 writing manifest file '/tmp/pip-pip-egg-info-bapjprti/mqhandler.egg-info/SOURCES.txt' 2022-11-10T18:02:07,382 Preparing metadata (setup.py): finished with status 'done' 2022-11-10T18:02:07,396 Source in /tmp/pip-wheel-1he5lun6/mqhandler_bbe6b8ef2fcf4a2b8492d82739dacc65 has version 0.0.21, which satisfies requirement mqhandler==0.0.21 from https://files.pythonhosted.org/packages/84/e0/023d925dfc98468f08260893d6d5ad3568228da38310a272e77abcd84a10/mqhandler-0.0.21.tar.gz 2022-11-10T18:02:07,398 Removed mqhandler==0.0.21 from https://files.pythonhosted.org/packages/84/e0/023d925dfc98468f08260893d6d5ad3568228da38310a272e77abcd84a10/mqhandler-0.0.21.tar.gz from build tracker '/tmp/pip-build-tracker-11mbjsld' 2022-11-10T18:02:07,414 Created temporary directory: /tmp/pip-unpack-3exrxw23 2022-11-10T18:02:07,415 Building wheels for collected packages: mqhandler 2022-11-10T18:02:07,425 Created temporary directory: /tmp/pip-wheel-wouraz7n 2022-11-10T18:02:07,425 Building wheel for mqhandler (setup.py): started 2022-11-10T18:02:07,427 Destination directory: /tmp/pip-wheel-wouraz7n 2022-11-10T18:02:07,428 Running command python setup.py bdist_wheel 2022-11-10T18:02:10,314 running bdist_wheel 2022-11-10T18:02:11,174 running build 2022-11-10T18:02:11,174 running build_py 2022-11-10T18:02:11,273 creating build 2022-11-10T18:02:11,274 creating build/lib 2022-11-10T18:02:11,275 creating build/lib/mqhandler 2022-11-10T18:02:11,277 copying mqhandler/fasta_grepper.py -> build/lib/mqhandler 2022-11-10T18:02:11,282 copying mqhandler/map_orthologs.py -> build/lib/mqhandler 2022-11-10T18:02:11,285 copying mqhandler/filter_ids.py -> build/lib/mqhandler 2022-11-10T18:02:11,290 copying mqhandler/remap_genenames.py -> build/lib/mqhandler 2022-11-10T18:02:11,294 copying mqhandler/__init__.py -> build/lib/mqhandler 2022-11-10T18:02:11,297 copying mqhandler/reduce_genenames.py -> build/lib/mqhandler 2022-11-10T18:02:11,302 creating build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,304 copying mqhandler/mq_utils/HGNC_mapping.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,308 copying mqhandler/mq_utils/mapping_handler.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,313 copying mqhandler/mq_utils/plotting.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,317 copying mqhandler/mq_utils/logger.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,322 copying mqhandler/mq_utils/__init__.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,325 copying mqhandler/mq_utils/runner_utils.py -> build/lib/mqhandler/mq_utils 2022-11-10T18:02:11,329 running egg_info 2022-11-10T18:02:11,583 writing mqhandler.egg-info/PKG-INFO 2022-11-10T18:02:11,590 writing dependency_links to mqhandler.egg-info/dependency_links.txt 2022-11-10T18:02:11,594 writing requirements to mqhandler.egg-info/requires.txt 2022-11-10T18:02:11,596 writing top-level names to mqhandler.egg-info/top_level.txt 2022-11-10T18:02:11,694 reading manifest file 'mqhandler.egg-info/SOURCES.txt' 2022-11-10T18:02:11,699 reading manifest template 'MANIFEST.in' 2022-11-10T18:02:11,704 adding license file 'LICENSE' 2022-11-10T18:02:11,711 writing manifest file 'mqhandler.egg-info/SOURCES.txt' 2022-11-10T18:02:11,715 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'mqhandler.mappings' as data is deprecated, please list it in `packages`. 2022-11-10T18:02:11,716 !! 2022-11-10T18:02:11,717 ############################ 2022-11-10T18:02:11,717 # Package would be ignored # 2022-11-10T18:02:11,717 ############################ 2022-11-10T18:02:11,718 Python recognizes 'mqhandler.mappings' as an importable package, 2022-11-10T18:02:11,718 but it is not listed in the `packages` configuration of setuptools. 2022-11-10T18:02:11,719 'mqhandler.mappings' has been automatically added to the distribution only 2022-11-10T18:02:11,719 because it may contain data files, but this behavior is likely to change 2022-11-10T18:02:11,720 in future versions of setuptools (and therefore is considered deprecated). 2022-11-10T18:02:11,721 Please make sure that 'mqhandler.mappings' is included as a package by using 2022-11-10T18:02:11,722 the `packages` configuration field or the proper discovery methods 2022-11-10T18:02:11,722 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-10T18:02:11,722 instead of `find_packages(...)`/`find:`). 2022-11-10T18:02:11,723 You can read more about "package discovery" and "data files" on setuptools 2022-11-10T18:02:11,723 documentation page. 2022-11-10T18:02:11,724 !! 2022-11-10T18:02:11,725 check.warn(importable) 2022-11-10T18:02:11,725 creating build/lib/mqhandler/mappings 2022-11-10T18:02:11,725 copying mqhandler/mappings/genenames_to_orthologs.csv -> build/lib/mqhandler/mappings 2022-11-10T18:02:11,785 copying mqhandler/mappings/genenames_to_protein.csv -> build/lib/mqhandler/mappings 2022-11-10T18:02:11,788 copying mqhandler/mappings/genenames_to_reduced_genenames.csv -> build/lib/mqhandler/mappings 2022-11-10T18:02:11,807 copying mqhandler/mappings/protein_to_genenames.csv -> build/lib/mqhandler/mappings 2022-11-10T18:02:11,994 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-10T18:02:11,995 setuptools.SetuptoolsDeprecationWarning, 2022-11-10T18:02:12,089 installing to build/bdist.linux-armv7l/wheel 2022-11-10T18:02:12,090 running install 2022-11-10T18:02:12,154 running install_lib 2022-11-10T18:02:12,252 creating build/bdist.linux-armv7l 2022-11-10T18:02:12,254 creating build/bdist.linux-armv7l/wheel 2022-11-10T18:02:12,258 creating build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,260 copying build/lib/mqhandler/fasta_grepper.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,265 copying build/lib/mqhandler/map_orthologs.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,269 copying build/lib/mqhandler/filter_ids.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,274 copying build/lib/mqhandler/remap_genenames.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,279 copying build/lib/mqhandler/__init__.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,283 copying build/lib/mqhandler/reduce_genenames.py -> build/bdist.linux-armv7l/wheel/mqhandler 2022-11-10T18:02:12,289 creating build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,292 copying build/lib/mqhandler/mq_utils/HGNC_mapping.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,296 copying build/lib/mqhandler/mq_utils/mapping_handler.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,302 copying build/lib/mqhandler/mq_utils/plotting.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,307 copying build/lib/mqhandler/mq_utils/logger.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,312 copying build/lib/mqhandler/mq_utils/__init__.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,316 copying build/lib/mqhandler/mq_utils/runner_utils.py -> build/bdist.linux-armv7l/wheel/mqhandler/mq_utils 2022-11-10T18:02:12,322 creating build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-10T18:02:12,324 copying build/lib/mqhandler/mappings/protein_to_genenames.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-10T18:02:12,417 copying build/lib/mqhandler/mappings/genenames_to_orthologs.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-10T18:02:12,479 copying build/lib/mqhandler/mappings/genenames_to_reduced_genenames.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-10T18:02:12,505 copying build/lib/mqhandler/mappings/genenames_to_protein.csv -> build/bdist.linux-armv7l/wheel/mqhandler/mappings 2022-11-10T18:02:12,508 running install_egg_info 2022-11-10T18:02:12,623 Copying mqhandler.egg-info to build/bdist.linux-armv7l/wheel/mqhandler-0.0.21-py3.7.egg-info 2022-11-10T18:02:12,643 running install_scripts 2022-11-10T18:02:12,809 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-10T18:02:12,819 creating build/bdist.linux-armv7l/wheel/mqhandler-0.0.21.dist-info/WHEEL 2022-11-10T18:02:12,823 creating '/tmp/pip-wheel-wouraz7n/mqhandler-0.0.21-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-10T18:02:12,828 adding 'mqhandler/__init__.py' 2022-11-10T18:02:12,831 adding 'mqhandler/fasta_grepper.py' 2022-11-10T18:02:12,834 adding 'mqhandler/filter_ids.py' 2022-11-10T18:02:12,837 adding 'mqhandler/map_orthologs.py' 2022-11-10T18:02:12,840 adding 'mqhandler/reduce_genenames.py' 2022-11-10T18:02:12,843 adding 'mqhandler/remap_genenames.py' 2022-11-10T18:02:13,145 adding 'mqhandler/mappings/genenames_to_orthologs.csv' 2022-11-10T18:02:13,171 adding 'mqhandler/mappings/genenames_to_protein.csv' 2022-11-10T18:02:13,247 adding 'mqhandler/mappings/genenames_to_reduced_genenames.csv' 2022-11-10T18:02:13,602 adding 'mqhandler/mappings/protein_to_genenames.csv' 2022-11-10T18:02:13,640 adding 'mqhandler/mq_utils/HGNC_mapping.py' 2022-11-10T18:02:13,642 adding 'mqhandler/mq_utils/__init__.py' 2022-11-10T18:02:13,645 adding 'mqhandler/mq_utils/logger.py' 2022-11-10T18:02:13,650 adding 'mqhandler/mq_utils/mapping_handler.py' 2022-11-10T18:02:13,653 adding 'mqhandler/mq_utils/plotting.py' 2022-11-10T18:02:13,656 adding 'mqhandler/mq_utils/runner_utils.py' 2022-11-10T18:02:13,673 adding 'mqhandler-0.0.21.dist-info/LICENSE' 2022-11-10T18:02:13,676 adding 'mqhandler-0.0.21.dist-info/METADATA' 2022-11-10T18:02:13,678 adding 'mqhandler-0.0.21.dist-info/WHEEL' 2022-11-10T18:02:13,679 adding 'mqhandler-0.0.21.dist-info/top_level.txt' 2022-11-10T18:02:13,681 adding 'mqhandler-0.0.21.dist-info/RECORD' 2022-11-10T18:02:13,715 removing build/bdist.linux-armv7l/wheel 2022-11-10T18:02:13,980 Building wheel for mqhandler (setup.py): finished with status 'done' 2022-11-10T18:02:14,010 Created wheel for mqhandler: filename=mqhandler-0.0.21-py3-none-any.whl size=777415 sha256=c79eaa2a7690f606618199be8b43837f6a6c8674c6048d0ed36a1376111d25ac 2022-11-10T18:02:14,012 Stored in directory: /tmp/pip-ephem-wheel-cache-85_2jgkr/wheels/96/c5/e5/777262940b95cff421d3ea0cb26281d9c01de648fe340ef3ba 2022-11-10T18:02:14,043 Successfully built mqhandler 2022-11-10T18:02:14,124 Removed build tracker: '/tmp/pip-build-tracker-11mbjsld'