2022-11-14T05:05:56,114 Created temporary directory: /tmp/pip-ephem-wheel-cache-omaq22wk 2022-11-14T05:05:56,118 Created temporary directory: /tmp/pip-build-tracker-g6e98_zv 2022-11-14T05:05:56,119 Initialized build tracking at /tmp/pip-build-tracker-g6e98_zv 2022-11-14T05:05:56,119 Created build tracker: /tmp/pip-build-tracker-g6e98_zv 2022-11-14T05:05:56,119 Entered build tracker: /tmp/pip-build-tracker-g6e98_zv 2022-11-14T05:05:56,121 Created temporary directory: /tmp/pip-wheel-zm_rwnl2 2022-11-14T05:05:56,129 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-14T05:05:56,134 Created temporary directory: /tmp/pip-ephem-wheel-cache-mj_vkcqy 2022-11-14T05:05:56,189 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-14T05:05:56,197 2 location(s) to search for versions of modisco-lite: 2022-11-14T05:05:56,197 * https://pypi.org/simple/modisco-lite/ 2022-11-14T05:05:56,197 * https://www.piwheels.org/simple/modisco-lite/ 2022-11-14T05:05:56,198 Fetching project page and analyzing links: https://pypi.org/simple/modisco-lite/ 2022-11-14T05:05:56,199 Getting page https://pypi.org/simple/modisco-lite/ 2022-11-14T05:05:56,202 Found index url https://pypi.org/simple 2022-11-14T05:05:56,440 Fetched page https://pypi.org/simple/modisco-lite/ as application/vnd.pypi.simple.v1+json 2022-11-14T05:05:56,450 Found link https://files.pythonhosted.org/packages/fe/3a/2c06281b3d3847486ef027833709ffd0e7f1ba44caf762613e42eeb8ba53/modisco-lite-0.0.6.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 0.0.6 2022-11-14T05:05:56,451 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/ad/f9/4d55d46a9a979c2500b2937bbf86ce58f11164f1a7c42f40d7f12539074d/modisco_lite-0.0.6-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,452 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/30/13/733efddc8a88ad7f0f50187d8b3651048ba1e9fb7b6be2cdaa0c1368869e/modisco_lite-0.0.6-py3.8.egg (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,452 Found link https://files.pythonhosted.org/packages/7a/3d/257d5418af62423f10a5e2505bedbf370fdd4d1f33fcae2d008192014f94/modisco-lite-0.0.8.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 0.0.8 2022-11-14T05:05:56,453 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/ae/e2/e54180faa3d604ef8ff3698a7a66a5382262b51ec8bcec2037e3f145acc2/modisco_lite-0.0.8-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,454 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/17/c9/ec6bbb0922c4aee2a52a388e6d75927c7c2cf73fbe5563cd9611ac54f044/modisco_lite-0.0.8-py3.8.egg (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,454 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/1b/72/283b5491eaa21416c4dd32a353e083be634336bd6375454c9a0f87eed3d5/modisco_lite-0.0.9-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,455 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/dd/74/208df6100d4a6b58182c814e1f1e434d495f7ac7f3a44382329bb8598307/modisco_lite-1.0.0-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,455 Found link https://files.pythonhosted.org/packages/a7/22/33cea033bd1cf4b549b1daccfbddd431935d35e55082b9b5ce6d42f00403/modisco-lite-2.0.0.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 2.0.0 2022-11-14T05:05:56,456 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/94/b4/c7fe662099aacc0b7c26656a6b2b6409c9519ef868516e1e49e8942fe362/modisco_lite-2.0.0-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,457 Found link https://files.pythonhosted.org/packages/d3/c4/021158d48c58910bc63dd4c53729259a398d27b8d12409b480d162b70478/modisco-lite-2.0.1.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 2.0.1 2022-11-14T05:05:56,457 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/16/74/8571b51313cf2440200a19211a7575d5b778689191a37960f007af17c322/modisco_lite-2.0.1-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,458 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/1e/14/d3e82299157eb8686b2a14b5e4ba3d01718f860a61029251994d0121e366/modisco_lite-2.0.1-py3.8.egg (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,458 Found link https://files.pythonhosted.org/packages/ba/82/c51646fd50362364835aa5b241ffcf52a441237abf8da5aaf811ffbacc8a/modisco-lite-2.0.2.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 2.0.2 2022-11-14T05:05:56,459 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/c4/76/a45ed392ebcf2a7de3a525ee3fb98d3299471099d389e03f3eb3b5753b10/modisco_lite-2.0.2-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,460 Found link https://files.pythonhosted.org/packages/ec/f9/03cf514026ad350efc63537e69de0bb54840912ad77675d0142b35b56704/modisco-lite-2.0.3.tar.gz (from https://pypi.org/simple/modisco-lite/), version: 2.0.3 2022-11-14T05:05:56,460 Skipping link: No binaries permitted for modisco-lite: https://files.pythonhosted.org/packages/d5/08/0448f46c4f10182036241bc59537b8ae3221efd466f378b6bbd1c68f2e49/modisco_lite-2.0.3-py3-none-any.whl (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,461 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/29/fd/e749b1a0855a69c8cadcb1134d10c67f12041a221ccbeb983c8fcc55b946/modisco_lite-2.0.3-py3.8.egg (from https://pypi.org/simple/modisco-lite/) 2022-11-14T05:05:56,462 Fetching project page and analyzing links: https://www.piwheels.org/simple/modisco-lite/ 2022-11-14T05:05:56,462 Getting page https://www.piwheels.org/simple/modisco-lite/ 2022-11-14T05:05:56,464 Found index url https://www.piwheels.org/simple 2022-11-14T05:05:57,033 Fetched page https://www.piwheels.org/simple/modisco-lite/ as text/html 2022-11-14T05:05:57,038 Skipping link: No binaries permitted for modisco-lite: https://www.piwheels.org/simple/modisco-lite/modisco_lite-2.0.2-py3-none-any.whl#sha256=73eb7f3baa420d253257c52bd29e0b0e88820c86c067562751d357772f805bc0 (from https://www.piwheels.org/simple/modisco-lite/) 2022-11-14T05:05:57,039 Skipping link: No binaries permitted for modisco-lite: https://www.piwheels.org/simple/modisco-lite/modisco_lite-2.0.1-py3-none-any.whl#sha256=75baa58526feb9795dba3375331adc6d5df4c333440d18a114ca9d6c598c9fbc (from https://www.piwheels.org/simple/modisco-lite/) 2022-11-14T05:05:57,039 Skipping link: No binaries permitted for modisco-lite: https://www.piwheels.org/simple/modisco-lite/modisco_lite-2.0.0-py3-none-any.whl#sha256=092309d62b0f24209e354f42a6725fd5a072bd235d3d98e0e3a6f327edf92e91 (from https://www.piwheels.org/simple/modisco-lite/) 2022-11-14T05:05:57,040 Skipping link: No binaries permitted for modisco-lite: https://www.piwheels.org/simple/modisco-lite/modisco_lite-0.0.8-py3-none-any.whl#sha256=6b2860560eef29fbc472b2beadebe28ea6c148c042d826f256846bed29285f6b (from https://www.piwheels.org/simple/modisco-lite/) 2022-11-14T05:05:57,040 Skipping link: No binaries permitted for modisco-lite: https://www.piwheels.org/simple/modisco-lite/modisco_lite-0.0.6-py3-none-any.whl#sha256=0c26a8fc6d8d22ec2fd3bba23581c035158d0e4bdba8d325d3483ad1db60f259 (from https://www.piwheels.org/simple/modisco-lite/) 2022-11-14T05:05:57,041 Skipping link: not a file: https://www.piwheels.org/simple/modisco-lite/ 2022-11-14T05:05:57,041 Skipping link: not a file: https://pypi.org/simple/modisco-lite/ 2022-11-14T05:05:57,079 Given no hashes to check 1 links for project 'modisco-lite': discarding no candidates 2022-11-14T05:05:57,109 Collecting modisco-lite==2.0.3 2022-11-14T05:05:57,113 Created temporary directory: /tmp/pip-unpack-smt7qzyj 2022-11-14T05:05:57,350 Downloading modisco-lite-2.0.3.tar.gz (29 kB) 2022-11-14T05:05:57,478 Added modisco-lite==2.0.3 from https://files.pythonhosted.org/packages/ec/f9/03cf514026ad350efc63537e69de0bb54840912ad77675d0142b35b56704/modisco-lite-2.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-g6e98_zv' 2022-11-14T05:05:57,481 Running setup.py (path:/tmp/pip-wheel-zm_rwnl2/modisco-lite_2425b8a2f6df492d837072afc0345d23/setup.py) egg_info for package modisco-lite 2022-11-14T05:05:57,483 Created temporary directory: /tmp/pip-pip-egg-info-1tksuu5h 2022-11-14T05:05:57,483 Preparing metadata (setup.py): started 2022-11-14T05:05:57,485 Running command python setup.py egg_info 2022-11-14T05:06:00,754 running egg_info 2022-11-14T05:06:00,759 creating /tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info 2022-11-14T05:06:00,814 writing /tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/PKG-INFO 2022-11-14T05:06:00,817 writing dependency_links to /tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/dependency_links.txt 2022-11-14T05:06:00,822 writing requirements to /tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/requires.txt 2022-11-14T05:06:00,824 writing top-level names to /tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/top_level.txt 2022-11-14T05:06:00,826 writing manifest file '/tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/SOURCES.txt' 2022-11-14T05:06:01,065 reading manifest file '/tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/SOURCES.txt' 2022-11-14T05:06:01,068 reading manifest template 'MANIFEST.in' 2022-11-14T05:06:01,070 warning: no files found matching 'modisco/cluster/phenograph/louvain/*convert*' 2022-11-14T05:06:01,071 warning: no files found matching 'modisco/cluster/phenograph/louvain/*community*' 2022-11-14T05:06:01,071 warning: no files found matching 'modisco/cluster/phenograph/louvain/*hierarchy*' 2022-11-14T05:06:01,071 adding license file 'LICENSE' 2022-11-14T05:06:01,077 writing manifest file '/tmp/pip-pip-egg-info-1tksuu5h/modisco_lite.egg-info/SOURCES.txt' 2022-11-14T05:06:01,282 Preparing metadata (setup.py): finished with status 'done' 2022-11-14T05:06:01,294 Source in /tmp/pip-wheel-zm_rwnl2/modisco-lite_2425b8a2f6df492d837072afc0345d23 has version 2.0.3, which satisfies requirement modisco-lite==2.0.3 from https://files.pythonhosted.org/packages/ec/f9/03cf514026ad350efc63537e69de0bb54840912ad77675d0142b35b56704/modisco-lite-2.0.3.tar.gz 2022-11-14T05:06:01,296 Removed modisco-lite==2.0.3 from https://files.pythonhosted.org/packages/ec/f9/03cf514026ad350efc63537e69de0bb54840912ad77675d0142b35b56704/modisco-lite-2.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-g6e98_zv' 2022-11-14T05:06:01,306 Created temporary directory: /tmp/pip-unpack-z19jt8qv 2022-11-14T05:06:01,307 Building wheels for collected packages: modisco-lite 2022-11-14T05:06:01,316 Created temporary directory: /tmp/pip-wheel-kltfllsz 2022-11-14T05:06:01,317 Building wheel for modisco-lite (setup.py): started 2022-11-14T05:06:01,319 Destination directory: /tmp/pip-wheel-kltfllsz 2022-11-14T05:06:01,319 Running command python setup.py bdist_wheel 2022-11-14T05:06:03,949 running bdist_wheel 2022-11-14T05:06:04,664 running build 2022-11-14T05:06:04,665 running build_py 2022-11-14T05:06:04,725 creating build 2022-11-14T05:06:04,725 creating build/lib 2022-11-14T05:06:04,726 creating build/lib/modiscolite 2022-11-14T05:06:04,728 copying modiscolite/__init__.py -> build/lib/modiscolite 2022-11-14T05:06:04,732 copying modiscolite/old_large_modisco.py -> build/lib/modiscolite 2022-11-14T05:06:04,735 copying modiscolite/core.py -> build/lib/modiscolite 2022-11-14T05:06:04,739 copying modiscolite/gapped_kmer.py -> build/lib/modiscolite 2022-11-14T05:06:04,742 copying modiscolite/aggregator.py -> build/lib/modiscolite 2022-11-14T05:06:04,749 copying modiscolite/report.py -> build/lib/modiscolite 2022-11-14T05:06:04,753 copying modiscolite/cluster.py -> build/lib/modiscolite 2022-11-14T05:06:04,756 copying modiscolite/tfmodisco.py -> build/lib/modiscolite 2022-11-14T05:06:04,760 copying modiscolite/extract_seqlets.py -> build/lib/modiscolite 2022-11-14T05:06:04,763 copying modiscolite/io.py -> build/lib/modiscolite 2022-11-14T05:06:04,767 copying modiscolite/affinitymat.py -> build/lib/modiscolite 2022-11-14T05:06:04,770 copying modiscolite/util.py -> build/lib/modiscolite 2022-11-14T05:06:04,775 running build_scripts 2022-11-14T05:06:04,776 creating build/scripts-3.7 2022-11-14T05:06:04,778 copying and adjusting modisco -> build/scripts-3.7 2022-11-14T05:06:04,781 changing mode of build/scripts-3.7/modisco from 644 to 755 2022-11-14T05:06:04,845 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-14T05:06:04,846 setuptools.SetuptoolsDeprecationWarning, 2022-11-14T05:06:04,902 installing to build/bdist.linux-armv7l/wheel 2022-11-14T05:06:04,903 running install 2022-11-14T05:06:04,965 running install_lib 2022-11-14T05:06:05,024 creating build/bdist.linux-armv7l 2022-11-14T05:06:05,024 creating build/bdist.linux-armv7l/wheel 2022-11-14T05:06:05,027 creating build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,029 copying build/lib/modiscolite/__init__.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,033 copying build/lib/modiscolite/old_large_modisco.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,037 copying build/lib/modiscolite/core.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,041 copying build/lib/modiscolite/gapped_kmer.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,044 copying build/lib/modiscolite/aggregator.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,049 copying build/lib/modiscolite/report.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,053 copying build/lib/modiscolite/cluster.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,056 copying build/lib/modiscolite/tfmodisco.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,060 copying build/lib/modiscolite/extract_seqlets.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,064 copying build/lib/modiscolite/io.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,068 copying build/lib/modiscolite/affinitymat.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,071 copying build/lib/modiscolite/util.py -> build/bdist.linux-armv7l/wheel/modiscolite 2022-11-14T05:06:05,074 running install_egg_info 2022-11-14T05:06:05,264 running egg_info 2022-11-14T05:06:05,318 writing modisco_lite.egg-info/PKG-INFO 2022-11-14T05:06:05,322 writing dependency_links to modisco_lite.egg-info/dependency_links.txt 2022-11-14T05:06:05,326 writing requirements to modisco_lite.egg-info/requires.txt 2022-11-14T05:06:05,328 writing top-level names to modisco_lite.egg-info/top_level.txt 2022-11-14T05:06:05,389 reading manifest file 'modisco_lite.egg-info/SOURCES.txt' 2022-11-14T05:06:05,393 reading manifest template 'MANIFEST.in' 2022-11-14T05:06:05,395 warning: no files found matching 'modisco/cluster/phenograph/louvain/*convert*' 2022-11-14T05:06:05,395 warning: no files found matching 'modisco/cluster/phenograph/louvain/*community*' 2022-11-14T05:06:05,396 warning: no files found matching 'modisco/cluster/phenograph/louvain/*hierarchy*' 2022-11-14T05:06:05,396 adding license file 'LICENSE' 2022-11-14T05:06:05,402 writing manifest file 'modisco_lite.egg-info/SOURCES.txt' 2022-11-14T05:06:05,404 Copying modisco_lite.egg-info to build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3-py3.7.egg-info 2022-11-14T05:06:05,424 running install_scripts 2022-11-14T05:06:05,534 creating build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3.data 2022-11-14T05:06:05,534 creating build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3.data/scripts 2022-11-14T05:06:05,536 copying build/scripts-3.7/modisco -> build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3.data/scripts 2022-11-14T05:06:05,540 changing mode of build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3.data/scripts/modisco to 755 2022-11-14T05:06:05,606 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-14T05:06:05,614 creating build/bdist.linux-armv7l/wheel/modisco_lite-2.0.3.dist-info/WHEEL 2022-11-14T05:06:05,618 creating '/tmp/pip-wheel-kltfllsz/modisco_lite-2.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-14T05:06:05,624 adding 'modisco_lite-2.0.3.data/scripts/modisco' 2022-11-14T05:06:05,630 adding 'modiscolite/__init__.py' 2022-11-14T05:06:05,634 adding 'modiscolite/affinitymat.py' 2022-11-14T05:06:05,639 adding 'modiscolite/aggregator.py' 2022-11-14T05:06:05,642 adding 'modiscolite/cluster.py' 2022-11-14T05:06:05,645 adding 'modiscolite/core.py' 2022-11-14T05:06:05,648 adding 'modiscolite/extract_seqlets.py' 2022-11-14T05:06:05,651 adding 'modiscolite/gapped_kmer.py' 2022-11-14T05:06:05,654 adding 'modiscolite/io.py' 2022-11-14T05:06:05,658 adding 'modiscolite/old_large_modisco.py' 2022-11-14T05:06:05,662 adding 'modiscolite/report.py' 2022-11-14T05:06:05,666 adding 'modiscolite/tfmodisco.py' 2022-11-14T05:06:05,669 adding 'modiscolite/util.py' 2022-11-14T05:06:05,671 adding 'modisco_lite-2.0.3.dist-info/LICENSE' 2022-11-14T05:06:05,673 adding 'modisco_lite-2.0.3.dist-info/METADATA' 2022-11-14T05:06:05,675 adding 'modisco_lite-2.0.3.dist-info/WHEEL' 2022-11-14T05:06:05,676 adding 'modisco_lite-2.0.3.dist-info/top_level.txt' 2022-11-14T05:06:05,678 adding 'modisco_lite-2.0.3.dist-info/RECORD' 2022-11-14T05:06:05,681 removing build/bdist.linux-armv7l/wheel 2022-11-14T05:06:05,939 Building wheel for modisco-lite (setup.py): finished with status 'done' 2022-11-14T05:06:05,946 Created wheel for modisco-lite: filename=modisco_lite-2.0.3-py3-none-any.whl size=31720 sha256=6e2187a2ce09cd950b7fb4e07ee9ba4923cde1d2729ff715b549ef27d56aff3e 2022-11-14T05:06:05,948 Stored in directory: /tmp/pip-ephem-wheel-cache-mj_vkcqy/wheels/53/e3/01/dc94eac880019506e42e711f7d2bf469dde3f837f28f7e9473 2022-11-14T05:06:05,974 Successfully built modisco-lite 2022-11-14T05:06:05,983 Removed build tracker: '/tmp/pip-build-tracker-g6e98_zv'