2022-11-19T16:01:08,103 Created temporary directory: /tmp/pip-ephem-wheel-cache-srotvnmo
2022-11-19T16:01:08,108 Created temporary directory: /tmp/pip-build-tracker-subuo74c
2022-11-19T16:01:08,109 Initialized build tracking at /tmp/pip-build-tracker-subuo74c
2022-11-19T16:01:08,109 Created build tracker: /tmp/pip-build-tracker-subuo74c
2022-11-19T16:01:08,109 Entered build tracker: /tmp/pip-build-tracker-subuo74c
2022-11-19T16:01:08,111 Created temporary directory: /tmp/pip-wheel-_zazg1hy
2022-11-19T16:01:08,118 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-19T16:01:08,124 Created temporary directory: /tmp/pip-ephem-wheel-cache-j0lbott_
2022-11-19T16:01:08,182 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-19T16:01:08,190 2 location(s) to search for versions of bionumpy:
2022-11-19T16:01:08,190 * https://pypi.org/simple/bionumpy/
2022-11-19T16:01:08,190 * https://www.piwheels.org/simple/bionumpy/
2022-11-19T16:01:08,191 Fetching project page and analyzing links: https://pypi.org/simple/bionumpy/
2022-11-19T16:01:08,192 Getting page https://pypi.org/simple/bionumpy/
2022-11-19T16:01:08,195 Found index url https://pypi.org/simple
2022-11-19T16:01:08,424 Fetched page https://pypi.org/simple/bionumpy/ as application/vnd.pypi.simple.v1+json
2022-11-19T16:01:08,435   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/f6/b0/34fecc4074b519bd71db9fc7df5873dacca1894613b387ccafd2234ac30f/bionumpy-0.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,436   Found link https://files.pythonhosted.org/packages/08/ff/e52bac27f634e00005bee3844156e30c6b3919deac9dfe30b3e677770ea9/bionumpy-0.1.0.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.1.0
2022-11-19T16:01:08,437   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/9d/b2/85910ea6aa64ebde40405421a61b972d3fa33b55fa7720a80d911797b2fe/bionumpy-0.1.1-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,438   Found link https://files.pythonhosted.org/packages/ec/dd/77807e5c4115fe32ca164f6a8a747626cd18a09aa89f49eaae6f007e90bf/bionumpy-0.1.1.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.1.1
2022-11-19T16:01:08,440   Found link https://files.pythonhosted.org/packages/2f/f4/3ada36e30da33417990cd738c679159e0119762652ad455500fb52645959/bionumpy-0.2.0.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.0
2022-11-19T16:01:08,441   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/e9/fa/3d255ef4b755214c13a844c54aae09192bcd46a54790758424561a694358/bionumpy-0.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,442   Found link https://files.pythonhosted.org/packages/25/fd/d09ea6ab356e27595184119023258c3e510b94977d8a8e6a1e0071fc6ca8/bionumpy-0.2.1.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.1
2022-11-19T16:01:08,443   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/fd/28/b368c940af81bedfb7cd31124b1924dd1779d479b7ff2114bcffadb19c91/bionumpy-0.2.2-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,444   Found link https://files.pythonhosted.org/packages/8f/ba/51966a3a22834bd921274986d7d0374c77ca6315ce81e3883b4743ddd1f7/bionumpy-0.2.2.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.2
2022-11-19T16:01:08,445   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/7d/5d/5e6e843a961934e92a036f6ef550167b24cc4e4afbdadf4f937294e1eca3/bionumpy-0.2.3-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,446   Found link https://files.pythonhosted.org/packages/b3/5f/a53a416a94469808d710437852c9e9f89ecbfab2ba8e54169cb3f704f8cd/bionumpy-0.2.3.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.3
2022-11-19T16:01:08,447   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/8d/0e/0fa38e2ae684ba39ef34308fa9883bc983e52cad86697230f63e3a88194e/bionumpy-0.2.4-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,448   Found link https://files.pythonhosted.org/packages/90/3d/36495b7e948214a56caecbf4d46636ce7384dfa23814aeb5f068a6a20d4b/bionumpy-0.2.4.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.4
2022-11-19T16:01:08,449   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/01/8b/1c8dfc2a1cda85233b4dfe34531ff01eb853674f12146b918d1e531c8672/bionumpy-0.2.5-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,450   Found link https://files.pythonhosted.org/packages/d2/0a/03a0bc040c344dca1736882ef1f060a52b949e65b2f6922e40bd7da457d1/bionumpy-0.2.5.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.5
2022-11-19T16:01:08,451   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/54/ec/de6adc2a1d517031081872b53ae6a36aaac94d2c068a1e78397c9eb2357e/bionumpy-0.2.6-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,452   Found link https://files.pythonhosted.org/packages/b9/04/43336406ff2102a222a31f3aa4c3d527e24f861ed17e0c72525a2af1da84/bionumpy-0.2.6.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.6
2022-11-19T16:01:08,453   Skipping link: No binaries permitted for bionumpy: https://files.pythonhosted.org/packages/a4/a3/467c8c2a240fa81df6098bb711b4fa6a05b0a019e2ecaa9673b2b836df0f/bionumpy-0.2.7-py2.py3-none-any.whl (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,454   Found link https://files.pythonhosted.org/packages/c0/a6/32c91e89875e3f229e52e5d0c0bbbb61c0bb6e9e79c394bf00bfcc835786/bionumpy-0.2.7.tar.gz (from https://pypi.org/simple/bionumpy/) (requires-python:>=3.6), version: 0.2.7
2022-11-19T16:01:08,455 Fetching project page and analyzing links: https://www.piwheels.org/simple/bionumpy/
2022-11-19T16:01:08,456 Getting page https://www.piwheels.org/simple/bionumpy/
2022-11-19T16:01:08,458 Found index url https://www.piwheels.org/simple
2022-11-19T16:01:08,681 Fetched page https://www.piwheels.org/simple/bionumpy/ as text/html
2022-11-19T16:01:08,690   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.6-py2.py3-none-any.whl#sha256=9e8513a0342345ea8c82375124bdf1fe280a4613876c9fe9976e13ba8201773b (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,691   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.5-py2.py3-none-any.whl#sha256=c71e325d68dbc27cd156fd0face876d3842b3c87c1ac9adf8fb01f20df8f15e4 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,691   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.4-py2.py3-none-any.whl#sha256=3d2bd4bf3dd32fe8a99df0372a0d499d45d7667b0d34cca36c35db1d504d91ce (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,692   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.3-py2.py3-none-any.whl#sha256=0220fbd8ff204d678d94d9312d74d21738edd8fd99881df03978a5e0790c62ac (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,692   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.2-py2.py3-none-any.whl#sha256=a92fc3d5b789a7d48a24f0f185d7b424d00ab970abb88c326ec691335433e457 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,693   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.1-py2.py3-none-any.whl#sha256=b266b5151792b6d3032aae7ed95cd2437390284464d505f2ab8e7e6952967a17 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,694   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.2.0-py2.py3-none-any.whl#sha256=24d21ba4e26f0d483cd35c15ddb53a6b52710946036aa11f34ac5d53e9428745 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,694   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.1.1-py2.py3-none-any.whl#sha256=9fbaf28cac2c4d88d121ab872f5b4255cd6ecd3090f69cd9aa116c2ef09e8f69 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,695   Skipping link: No binaries permitted for bionumpy: https://www.piwheels.org/simple/bionumpy/bionumpy-0.1.0-py2.py3-none-any.whl#sha256=85812340992efe8325cbab60243208831cb5a7b934d10fa01beb60bb2000f886 (from https://www.piwheels.org/simple/bionumpy/) (requires-python:>=3.6)
2022-11-19T16:01:08,695 Skipping link: not a file: https://www.piwheels.org/simple/bionumpy/
2022-11-19T16:01:08,696 Skipping link: not a file: https://pypi.org/simple/bionumpy/
2022-11-19T16:01:08,735 Given no hashes to check 1 links for project 'bionumpy': discarding no candidates
2022-11-19T16:01:08,765 Collecting bionumpy==0.2.7
2022-11-19T16:01:08,770   Created temporary directory: /tmp/pip-unpack-37uuqaiq
2022-11-19T16:01:09,020   Downloading bionumpy-0.2.7.tar.gz (71 kB)
2022-11-19T16:01:09,524   Added bionumpy==0.2.7 from https://files.pythonhosted.org/packages/c0/a6/32c91e89875e3f229e52e5d0c0bbbb61c0bb6e9e79c394bf00bfcc835786/bionumpy-0.2.7.tar.gz to build tracker '/tmp/pip-build-tracker-subuo74c'
2022-11-19T16:01:09,527   Running setup.py (path:/tmp/pip-wheel-_zazg1hy/bionumpy_143aefeaae0445dead657f65ca7e28c1/setup.py) egg_info for package bionumpy
2022-11-19T16:01:09,529   Created temporary directory: /tmp/pip-pip-egg-info-xnprxgje
2022-11-19T16:01:09,529   Preparing metadata (setup.py): started
2022-11-19T16:01:09,531   Running command python setup.py egg_info
2022-11-19T16:01:12,061   running egg_info
2022-11-19T16:01:12,066   creating /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info
2022-11-19T16:01:12,126   writing /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/PKG-INFO
2022-11-19T16:01:12,131   writing dependency_links to /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/dependency_links.txt
2022-11-19T16:01:12,135   writing entry points to /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/entry_points.txt
2022-11-19T16:01:12,137   writing requirements to /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/requires.txt
2022-11-19T16:01:12,139   writing top-level names to /tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/top_level.txt
2022-11-19T16:01:12,141   writing manifest file '/tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/SOURCES.txt'
2022-11-19T16:01:12,346   reading manifest file '/tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/SOURCES.txt'
2022-11-19T16:01:12,349   reading manifest template 'MANIFEST.in'
2022-11-19T16:01:12,351   warning: no files found matching 'CONTRIBUTING.rst'
2022-11-19T16:01:12,386   warning: no previously-included files matching '__pycache__' found under directory '*'
2022-11-19T16:01:12,388   warning: no previously-included files matching '*.py[co]' found under directory '*'
2022-11-19T16:01:12,389   warning: no files found matching '*.rst' under directory 'docs'
2022-11-19T16:01:12,389   warning: no files found matching 'conf.py' under directory 'docs'
2022-11-19T16:01:12,390   warning: no files found matching 'Makefile' under directory 'docs'
2022-11-19T16:01:12,390   warning: no files found matching 'make.bat' under directory 'docs'
2022-11-19T16:01:12,390   warning: no files found matching '*.jpg' under directory 'docs'
2022-11-19T16:01:12,391   warning: no files found matching '*.png' under directory 'docs'
2022-11-19T16:01:12,391   warning: no files found matching '*.gif' under directory 'docs'
2022-11-19T16:01:12,391   adding license file 'LICENSE'
2022-11-19T16:01:12,404   writing manifest file '/tmp/pip-pip-egg-info-xnprxgje/bionumpy.egg-info/SOURCES.txt'
2022-11-19T16:01:12,609   Preparing metadata (setup.py): finished with status 'done'
2022-11-19T16:01:12,622   Source in /tmp/pip-wheel-_zazg1hy/bionumpy_143aefeaae0445dead657f65ca7e28c1 has version 0.2.7, which satisfies requirement bionumpy==0.2.7 from https://files.pythonhosted.org/packages/c0/a6/32c91e89875e3f229e52e5d0c0bbbb61c0bb6e9e79c394bf00bfcc835786/bionumpy-0.2.7.tar.gz
2022-11-19T16:01:12,624   Removed bionumpy==0.2.7 from https://files.pythonhosted.org/packages/c0/a6/32c91e89875e3f229e52e5d0c0bbbb61c0bb6e9e79c394bf00bfcc835786/bionumpy-0.2.7.tar.gz from build tracker '/tmp/pip-build-tracker-subuo74c'
2022-11-19T16:01:12,639 Created temporary directory: /tmp/pip-unpack-vx5ti90n
2022-11-19T16:01:12,640 Building wheels for collected packages: bionumpy
2022-11-19T16:01:12,650   Created temporary directory: /tmp/pip-wheel-k2u_5xd3
2022-11-19T16:01:12,650   Building wheel for bionumpy (setup.py): started
2022-11-19T16:01:12,652   Destination directory: /tmp/pip-wheel-k2u_5xd3
2022-11-19T16:01:12,653   Running command python setup.py bdist_wheel
2022-11-19T16:01:15,165   running bdist_wheel
2022-11-19T16:01:15,955   running build
2022-11-19T16:01:15,955   running build_py
2022-11-19T16:01:16,026   creating build
2022-11-19T16:01:16,027   creating build/lib
2022-11-19T16:01:16,028   creating build/lib/bionumpy
2022-11-19T16:01:16,030   copying bionumpy/kmer_index.py -> build/lib/bionumpy
2022-11-19T16:01:16,034   copying bionumpy/alignments.py -> build/lib/bionumpy
2022-11-19T16:01:16,037   copying bionumpy/__init__.py -> build/lib/bionumpy
2022-11-19T16:01:16,041   copying bionumpy/intervals.py -> build/lib/bionumpy
2022-11-19T16:01:16,045   copying bionumpy/gtf.py -> build/lib/bionumpy
2022-11-19T16:01:16,049   copying bionumpy/counter.py -> build/lib/bionumpy
2022-11-19T16:01:16,053   copying bionumpy/cigar.py -> build/lib/bionumpy
2022-11-19T16:01:16,056   copying bionumpy/cli.py -> build/lib/bionumpy
2022-11-19T16:01:16,059   copying bionumpy/variants.py -> build/lib/bionumpy
2022-11-19T16:01:16,063   copying bionumpy/wildcard_index.py -> build/lib/bionumpy
2022-11-19T16:01:16,066   copying bionumpy/util.py -> build/lib/bionumpy
2022-11-19T16:01:16,069   copying bionumpy/lookup.py -> build/lib/bionumpy
2022-11-19T16:01:16,072   copying bionumpy/bedgraph.py -> build/lib/bionumpy
2022-11-19T16:01:16,076   copying bionumpy/bnpdataclass.py -> build/lib/bionumpy
2022-11-19T16:01:16,080   copying bionumpy/rollable.py -> build/lib/bionumpy
2022-11-19T16:01:16,083   copying bionumpy/encoded_array.py -> build/lib/bionumpy
2022-11-19T16:01:16,087   copying bionumpy/datatypes.py -> build/lib/bionumpy
2022-11-19T16:01:16,091   copying bionumpy/dna.py -> build/lib/bionumpy
2022-11-19T16:01:16,095   copying bionumpy/mutation_signature.py -> build/lib/bionumpy
2022-11-19T16:01:16,100   copying bionumpy/testing.py -> build/lib/bionumpy
2022-11-19T16:01:16,104   copying bionumpy/code_nodes.py -> build/lib/bionumpy
2022-11-19T16:01:16,108   copying bionumpy/bionumpy.py -> build/lib/bionumpy
2022-11-19T16:01:16,112   copying bionumpy/vcf.py -> build/lib/bionumpy
2022-11-19T16:01:16,117   creating build/lib/bionumpy/encodings
2022-11-19T16:01:16,119   copying bionumpy/encodings/__init__.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,124   copying bionumpy/encodings/base_encoding.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,128   copying bionumpy/encodings/_legacy_encodings.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,132   copying bionumpy/encodings/alphabet_encoding.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,136   copying bionumpy/encodings/vcf_encoding.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,141   copying bionumpy/encodings/kmer_encodings.py -> build/lib/bionumpy/encodings
2022-11-19T16:01:16,146   creating build/lib/bionumpy/sequence
2022-11-19T16:01:16,149   copying bionumpy/sequence/translate.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,153   copying bionumpy/sequence/__init__.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,157   copying bionumpy/sequence/kmers.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,161   copying bionumpy/sequence/string_matcher.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,166   copying bionumpy/sequence/position_weight_matrix.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,170   copying bionumpy/sequence/minimizers.py -> build/lib/bionumpy/sequence
2022-11-19T16:01:16,175   creating build/lib/bionumpy/cupy_compatible
2022-11-19T16:01:16,177   copying bionumpy/cupy_compatible/parser.py -> build/lib/bionumpy/cupy_compatible
2022-11-19T16:01:16,181   copying bionumpy/cupy_compatible/__init__.py -> build/lib/bionumpy/cupy_compatible
2022-11-19T16:01:16,186   creating build/lib/bionumpy/streams
2022-11-19T16:01:16,189   copying bionumpy/streams/decorators.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,193   copying bionumpy/streams/stream.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,197   copying bionumpy/streams/__init__.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,201   copying bionumpy/streams/multistream.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,206   copying bionumpy/streams/reductions.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,210   copying bionumpy/streams/groupby_func.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,214   copying bionumpy/streams/grouped.py -> build/lib/bionumpy/streams
2022-11-19T16:01:16,220   creating build/lib/bionumpy/simulate
2022-11-19T16:01:16,222   copying bionumpy/simulate/chipseq.py -> build/lib/bionumpy/simulate
2022-11-19T16:01:16,227   copying bionumpy/simulate/__init__.py -> build/lib/bionumpy/simulate
2022-11-19T16:01:16,232   creating build/lib/bionumpy/io
2022-11-19T16:01:16,234   copying bionumpy/io/parser.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,239   copying bionumpy/io/__init__.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,243   copying bionumpy/io/indexed_files.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,247   copying bionumpy/io/matrix_dump.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,251   copying bionumpy/io/motifs.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,255   copying bionumpy/io/strops.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,260   copying bionumpy/io/files.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,265   copying bionumpy/io/multiline_buffer.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,269   copying bionumpy/io/file_buffers.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,274   copying bionumpy/io/bam.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,279   copying bionumpy/io/jaspar.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,283   copying bionumpy/io/gfa.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,286   copying bionumpy/io/indexed_fasta.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,290   copying bionumpy/io/delimited_buffers.py -> build/lib/bionumpy/io
2022-11-19T16:01:16,294   running egg_info
2022-11-19T16:01:16,457   writing bionumpy.egg-info/PKG-INFO
2022-11-19T16:01:16,461   writing dependency_links to bionumpy.egg-info/dependency_links.txt
2022-11-19T16:01:16,464   writing entry points to bionumpy.egg-info/entry_points.txt
2022-11-19T16:01:16,467   writing requirements to bionumpy.egg-info/requires.txt
2022-11-19T16:01:16,469   writing top-level names to bionumpy.egg-info/top_level.txt
2022-11-19T16:01:16,547   reading manifest file 'bionumpy.egg-info/SOURCES.txt'
2022-11-19T16:01:16,567   reading manifest template 'MANIFEST.in'
2022-11-19T16:01:16,568   warning: no files found matching 'CONTRIBUTING.rst'
2022-11-19T16:01:16,603   warning: no previously-included files matching '__pycache__' found under directory '*'
2022-11-19T16:01:16,605   warning: no previously-included files matching '*.py[co]' found under directory '*'
2022-11-19T16:01:16,605   warning: no files found matching '*.rst' under directory 'docs'
2022-11-19T16:01:16,606   warning: no files found matching 'conf.py' under directory 'docs'
2022-11-19T16:01:16,606   warning: no files found matching 'Makefile' under directory 'docs'
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2022-11-19T16:01:16,608   adding license file 'LICENSE'
2022-11-19T16:01:16,624   writing manifest file 'bionumpy.egg-info/SOURCES.txt'
2022-11-19T16:01:16,715   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-19T16:01:16,716     setuptools.SetuptoolsDeprecationWarning,
2022-11-19T16:01:16,778   installing to build/bdist.linux-armv7l/wheel
2022-11-19T16:01:16,778   running install
2022-11-19T16:01:16,840   running install_lib
2022-11-19T16:01:16,906   creating build/bdist.linux-armv7l
2022-11-19T16:01:16,907   creating build/bdist.linux-armv7l/wheel
2022-11-19T16:01:16,910   creating build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,912   copying build/lib/bionumpy/kmer_index.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,916   copying build/lib/bionumpy/alignments.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,920   copying build/lib/bionumpy/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,924   creating build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,926   copying build/lib/bionumpy/encodings/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,929   copying build/lib/bionumpy/encodings/base_encoding.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,932   copying build/lib/bionumpy/encodings/_legacy_encodings.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,936   copying build/lib/bionumpy/encodings/alphabet_encoding.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,939   copying build/lib/bionumpy/encodings/vcf_encoding.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,942   copying build/lib/bionumpy/encodings/kmer_encodings.py -> build/bdist.linux-armv7l/wheel/bionumpy/encodings
2022-11-19T16:01:16,946   copying build/lib/bionumpy/intervals.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,949   copying build/lib/bionumpy/gtf.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,952   copying build/lib/bionumpy/counter.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,956   copying build/lib/bionumpy/cigar.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,959   copying build/lib/bionumpy/cli.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,962   copying build/lib/bionumpy/variants.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,965   copying build/lib/bionumpy/wildcard_index.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,968   copying build/lib/bionumpy/util.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,971   copying build/lib/bionumpy/lookup.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,974   copying build/lib/bionumpy/bedgraph.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:16,978   creating build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,980   copying build/lib/bionumpy/sequence/translate.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,983   copying build/lib/bionumpy/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,987   copying build/lib/bionumpy/sequence/kmers.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,990   copying build/lib/bionumpy/sequence/string_matcher.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,993   copying build/lib/bionumpy/sequence/position_weight_matrix.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:16,997   copying build/lib/bionumpy/sequence/minimizers.py -> build/bdist.linux-armv7l/wheel/bionumpy/sequence
2022-11-19T16:01:17,000   copying build/lib/bionumpy/bnpdataclass.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,003   copying build/lib/bionumpy/rollable.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,006   copying build/lib/bionumpy/encoded_array.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,010   copying build/lib/bionumpy/datatypes.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,014   copying build/lib/bionumpy/dna.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,018   creating build/bdist.linux-armv7l/wheel/bionumpy/cupy_compatible
2022-11-19T16:01:17,019   copying build/lib/bionumpy/cupy_compatible/parser.py -> build/bdist.linux-armv7l/wheel/bionumpy/cupy_compatible
2022-11-19T16:01:17,023   copying build/lib/bionumpy/cupy_compatible/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/cupy_compatible
2022-11-19T16:01:17,026   copying build/lib/bionumpy/mutation_signature.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,030   creating build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,032   copying build/lib/bionumpy/streams/decorators.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,035   copying build/lib/bionumpy/streams/stream.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,038   copying build/lib/bionumpy/streams/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,041   copying build/lib/bionumpy/streams/multistream.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,045   copying build/lib/bionumpy/streams/reductions.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,048   copying build/lib/bionumpy/streams/groupby_func.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,052   copying build/lib/bionumpy/streams/grouped.py -> build/bdist.linux-armv7l/wheel/bionumpy/streams
2022-11-19T16:01:17,057   creating build/bdist.linux-armv7l/wheel/bionumpy/simulate
2022-11-19T16:01:17,058   copying build/lib/bionumpy/simulate/chipseq.py -> build/bdist.linux-armv7l/wheel/bionumpy/simulate
2022-11-19T16:01:17,062   copying build/lib/bionumpy/simulate/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/simulate
2022-11-19T16:01:17,064   copying build/lib/bionumpy/testing.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,067   copying build/lib/bionumpy/code_nodes.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,071   copying build/lib/bionumpy/bionumpy.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,074   copying build/lib/bionumpy/vcf.py -> build/bdist.linux-armv7l/wheel/bionumpy
2022-11-19T16:01:17,078   creating build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,080   copying build/lib/bionumpy/io/parser.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,084   copying build/lib/bionumpy/io/__init__.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,086   copying build/lib/bionumpy/io/indexed_files.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,090   copying build/lib/bionumpy/io/matrix_dump.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,093   copying build/lib/bionumpy/io/motifs.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,096   copying build/lib/bionumpy/io/strops.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,100   copying build/lib/bionumpy/io/files.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,104   copying build/lib/bionumpy/io/multiline_buffer.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,108   copying build/lib/bionumpy/io/file_buffers.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,112   copying build/lib/bionumpy/io/bam.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,116   copying build/lib/bionumpy/io/jaspar.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,119   copying build/lib/bionumpy/io/gfa.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,122   copying build/lib/bionumpy/io/indexed_fasta.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,126   copying build/lib/bionumpy/io/delimited_buffers.py -> build/bdist.linux-armv7l/wheel/bionumpy/io
2022-11-19T16:01:17,130   running install_egg_info
2022-11-19T16:01:17,204   Copying bionumpy.egg-info to build/bdist.linux-armv7l/wheel/bionumpy-0.2.7-py3.7.egg-info
2022-11-19T16:01:17,230   running install_scripts
2022-11-19T16:01:17,428   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-11-19T16:01:17,437   creating build/bdist.linux-armv7l/wheel/bionumpy-0.2.7.dist-info/WHEEL
2022-11-19T16:01:17,442   creating '/tmp/pip-wheel-k2u_5xd3/bionumpy-0.2.7-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-19T16:01:17,458   adding 'bionumpy/__init__.py'
2022-11-19T16:01:17,461   adding 'bionumpy/alignments.py'
2022-11-19T16:01:17,464   adding 'bionumpy/bedgraph.py'
2022-11-19T16:01:17,466   adding 'bionumpy/bionumpy.py'
2022-11-19T16:01:17,469   adding 'bionumpy/bnpdataclass.py'
2022-11-19T16:01:17,471   adding 'bionumpy/cigar.py'
2022-11-19T16:01:17,473   adding 'bionumpy/cli.py'
2022-11-19T16:01:17,476   adding 'bionumpy/code_nodes.py'
2022-11-19T16:01:17,478   adding 'bionumpy/counter.py'
2022-11-19T16:01:17,481   adding 'bionumpy/datatypes.py'
2022-11-19T16:01:17,483   adding 'bionumpy/dna.py'
2022-11-19T16:01:17,487   adding 'bionumpy/encoded_array.py'
2022-11-19T16:01:17,490   adding 'bionumpy/gtf.py'
2022-11-19T16:01:17,494   adding 'bionumpy/intervals.py'
2022-11-19T16:01:17,496   adding 'bionumpy/kmer_index.py'
2022-11-19T16:01:17,499   adding 'bionumpy/lookup.py'
2022-11-19T16:01:17,501   adding 'bionumpy/mutation_signature.py'
2022-11-19T16:01:17,504   adding 'bionumpy/rollable.py'
2022-11-19T16:01:17,507   adding 'bionumpy/testing.py'
2022-11-19T16:01:17,509   adding 'bionumpy/util.py'
2022-11-19T16:01:17,511   adding 'bionumpy/variants.py'
2022-11-19T16:01:17,514   adding 'bionumpy/vcf.py'
2022-11-19T16:01:17,516   adding 'bionumpy/wildcard_index.py'
2022-11-19T16:01:17,519   adding 'bionumpy/cupy_compatible/__init__.py'
2022-11-19T16:01:17,522   adding 'bionumpy/cupy_compatible/parser.py'
2022-11-19T16:01:17,525   adding 'bionumpy/encodings/__init__.py'
2022-11-19T16:01:17,528   adding 'bionumpy/encodings/_legacy_encodings.py'
2022-11-19T16:01:17,531   adding 'bionumpy/encodings/alphabet_encoding.py'
2022-11-19T16:01:17,534   adding 'bionumpy/encodings/base_encoding.py'
2022-11-19T16:01:17,536   adding 'bionumpy/encodings/kmer_encodings.py'
2022-11-19T16:01:17,539   adding 'bionumpy/encodings/vcf_encoding.py'
2022-11-19T16:01:17,542   adding 'bionumpy/io/__init__.py'
2022-11-19T16:01:17,545   adding 'bionumpy/io/bam.py'
2022-11-19T16:01:17,551   adding 'bionumpy/io/delimited_buffers.py'
2022-11-19T16:01:17,555   adding 'bionumpy/io/file_buffers.py'
2022-11-19T16:01:17,559   adding 'bionumpy/io/files.py'
2022-11-19T16:01:17,562   adding 'bionumpy/io/gfa.py'
2022-11-19T16:01:17,564   adding 'bionumpy/io/indexed_fasta.py'
2022-11-19T16:01:17,567   adding 'bionumpy/io/indexed_files.py'
2022-11-19T16:01:17,569   adding 'bionumpy/io/jaspar.py'
2022-11-19T16:01:17,571   adding 'bionumpy/io/matrix_dump.py'
2022-11-19T16:01:17,585   adding 'bionumpy/io/motifs.py'
2022-11-19T16:01:17,588   adding 'bionumpy/io/multiline_buffer.py'
2022-11-19T16:01:17,591   adding 'bionumpy/io/parser.py'
2022-11-19T16:01:17,595   adding 'bionumpy/io/strops.py'
2022-11-19T16:01:17,598   adding 'bionumpy/sequence/__init__.py'
2022-11-19T16:01:17,601   adding 'bionumpy/sequence/kmers.py'
2022-11-19T16:01:17,603   adding 'bionumpy/sequence/minimizers.py'
2022-11-19T16:01:17,606   adding 'bionumpy/sequence/position_weight_matrix.py'
2022-11-19T16:01:17,609   adding 'bionumpy/sequence/string_matcher.py'
2022-11-19T16:01:17,611   adding 'bionumpy/sequence/translate.py'
2022-11-19T16:01:17,614   adding 'bionumpy/simulate/__init__.py'
2022-11-19T16:01:17,617   adding 'bionumpy/simulate/chipseq.py'
2022-11-19T16:01:17,620   adding 'bionumpy/streams/__init__.py'
2022-11-19T16:01:17,623   adding 'bionumpy/streams/decorators.py'
2022-11-19T16:01:17,625   adding 'bionumpy/streams/groupby_func.py'
2022-11-19T16:01:17,628   adding 'bionumpy/streams/grouped.py'
2022-11-19T16:01:17,632   adding 'bionumpy/streams/multistream.py'
2022-11-19T16:01:17,634   adding 'bionumpy/streams/reductions.py'
2022-11-19T16:01:17,636   adding 'bionumpy/streams/stream.py'
2022-11-19T16:01:17,641   adding 'bionumpy-0.2.7.dist-info/LICENSE'
2022-11-19T16:01:17,643   adding 'bionumpy-0.2.7.dist-info/METADATA'
2022-11-19T16:01:17,645   adding 'bionumpy-0.2.7.dist-info/WHEEL'
2022-11-19T16:01:17,646   adding 'bionumpy-0.2.7.dist-info/entry_points.txt'
2022-11-19T16:01:17,648   adding 'bionumpy-0.2.7.dist-info/top_level.txt'
2022-11-19T16:01:17,651   adding 'bionumpy-0.2.7.dist-info/RECORD'
2022-11-19T16:01:17,657   removing build/bdist.linux-armv7l/wheel
2022-11-19T16:01:17,934   Building wheel for bionumpy (setup.py): finished with status 'done'
2022-11-19T16:01:17,943   Created wheel for bionumpy: filename=bionumpy-0.2.7-py2.py3-none-any.whl size=69556 sha256=d06f04cffbe65b3f14d9d3bc2b545b14c8959b03671d0ca75f5b0920d8f8d019
2022-11-19T16:01:17,945   Stored in directory: /tmp/pip-ephem-wheel-cache-j0lbott_/wheels/9a/ee/e8/cb6bc35286c5a5d13f9c89843a5863912e31c9e854404cc3aa
2022-11-19T16:01:17,976 Successfully built bionumpy
2022-11-19T16:01:17,990 Removed build tracker: '/tmp/pip-build-tracker-subuo74c'