2022-11-20T13:03:45,812 Created temporary directory: /tmp/pip-ephem-wheel-cache-2rmn15xz 2022-11-20T13:03:45,814 Created temporary directory: /tmp/pip-build-tracker-zhv5s12j 2022-11-20T13:03:45,814 Initialized build tracking at /tmp/pip-build-tracker-zhv5s12j 2022-11-20T13:03:45,814 Created build tracker: /tmp/pip-build-tracker-zhv5s12j 2022-11-20T13:03:45,814 Entered build tracker: /tmp/pip-build-tracker-zhv5s12j 2022-11-20T13:03:45,815 Created temporary directory: /tmp/pip-wheel-psecer6g 2022-11-20T13:03:45,818 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-20T13:03:45,820 Created temporary directory: /tmp/pip-ephem-wheel-cache-3vv8uvwa 2022-11-20T13:03:45,847 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-20T13:03:45,850 2 location(s) to search for versions of scirpy: 2022-11-20T13:03:45,850 * https://pypi.org/simple/scirpy/ 2022-11-20T13:03:45,850 * https://www.piwheels.org/simple/scirpy/ 2022-11-20T13:03:45,851 Fetching project page and analyzing links: https://pypi.org/simple/scirpy/ 2022-11-20T13:03:45,851 Getting page https://pypi.org/simple/scirpy/ 2022-11-20T13:03:45,852 Found index url https://pypi.org/simple 2022-11-20T13:03:45,906 Fetched page https://pypi.org/simple/scirpy/ as application/vnd.pypi.simple.v1+json 2022-11-20T13:03:45,914 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/2b/87/294b2db5a86fc0420d8472a732e49c53edfea03eea6f7244c0d8178c2eef/scirpy-0.0.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) 2022-11-20T13:03:45,915 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/c1/0d/55deb716b55bf3fdba97a13b414a6435504b58c2783541e3a648b4ce524b/scirpy-0.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,915 Found link https://files.pythonhosted.org/packages/e4/e7/968694b1e6bef7fabd4f3d51ba8107e8c2531b3269659cd9efb330485006/scirpy-0.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1 2022-11-20T13:03:45,916 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/5d/14/f453797774d231cf8d873cc4017b57202ef6b9e63d88336baadd2cfbef2a/scirpy-0.1.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,916 Found link https://files.pythonhosted.org/packages/6f/98/93df2761c6f2f9db818972b716671e18fb53a54229d2bd4f9ee0093cb1a2/scirpy-0.1.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1.1 2022-11-20T13:03:45,917 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/4e/d3/154dc4b761af9cb84c2847f6845ec5804cdd560fc46ac9dba7d3062fbc70/scirpy-0.1.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,917 Found link https://files.pythonhosted.org/packages/b5/66/35b338b503b03f4402cef50d194df7a2f5dfbf9a6b594f1d64b1382ba1f3/scirpy-0.1.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.1.2 2022-11-20T13:03:45,917 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/e4/35/e475df47b99a610357483f8d375dab86ef81b91ae94f5d822360cf843a81/scirpy-0.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,918 Found link https://files.pythonhosted.org/packages/18/75/627553f60af1b1b636e6cbf038cf6ee60575ece206a5e737bcf829f78682/scirpy-0.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.2 2022-11-20T13:03:45,918 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/8e/af/49fd3d1bcc40ba97c5dc3be27e88899101a1f7e368fdcb3c6170a2e0b45e/scirpy-0.3-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,919 Found link https://files.pythonhosted.org/packages/db/07/9027996c75a175c8db97bfc5353eead9d44f50d6f9af62520cb513ba7076/scirpy-0.3.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.3 2022-11-20T13:03:45,919 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/9f/99/2b8a921ef3b793407d56b60651d164a2c1a3560e46cc31362552680c87de/scirpy-0.4-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,920 Found link https://files.pythonhosted.org/packages/b7/5b/94a919bbc3ee1e8a62beb95c79f8c6183113f5946b9e1baa6d5ef5ecb772/scirpy-0.4.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4 2022-11-20T13:03:45,920 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/de/19/df4d8de48fbab8a927bbcff075c4ce209cf59e985b314acb2e0c91c9a76a/scirpy-0.4.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,920 Found link https://files.pythonhosted.org/packages/76/3c/413d60aaf3b1b7e0b6d27c2f9a7edab73bcde8d411848998b4670c7557d8/scirpy-0.4.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4.1 2022-11-20T13:03:45,921 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/8e/2b/37bcb68bb8979f0a0b1748d237d13a93f6d78bf757af31c46321fe7dffec/scirpy-0.4.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,921 Found link https://files.pythonhosted.org/packages/f1/1c/69702260034189b09de8eee0ba214a498f0b253e059140543ca3ca348e7e/scirpy-0.4.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.4.2 2022-11-20T13:03:45,921 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/1e/d1/51afe3f1c0dfeaca34e4596dd717df2bc3eca6246c7ec9ccfe8b9213111d/scirpy-0.5.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,922 Found link https://files.pythonhosted.org/packages/9d/73/a8cf8bc4105958641eed539a6c81fe51723c339955ec9fc5ec2242afe4c6/scirpy-0.5.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.5.0 2022-11-20T13:03:45,922 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/84/bb/03425371ced2bb07b125e8d69a86ff92a822d188b37844cec822d290fa5e/scirpy-0.6.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,923 Found link https://files.pythonhosted.org/packages/6b/02/4c9e1ce0b94c678c76913102a3cfd58e238104fd574b4585be8e6c00ba0e/scirpy-0.6.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.6.0 2022-11-20T13:03:45,923 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/83/6c/ca2da9be5c2466530f27f02c6303f679f34acab2231c630c3f040d840ef5/scirpy-0.6.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:45,924 Found link https://files.pythonhosted.org/packages/84/9e/8b43cdf19c65935c68cc88dda9e16b25dd4876791f179918097f1d24a6e4/scirpy-0.6.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.6), version: 0.6.1 2022-11-20T13:03:45,924 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/49/58/f738f345da5ba61baaaeee50030c1a7e054c49d83a348d440e770ba8765f/scirpy-0.7.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,924 Found link https://files.pythonhosted.org/packages/7d/9c/696fa2e8b375102c01438f48bfba391e781b5deac62cafedfed662d974ca/scirpy-0.7.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.7.0 2022-11-20T13:03:45,925 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/bd/6f/cd4ce286c928a4febe63532c2ca1b0ed570f018f9545eb0274dd2a588504/scirpy-0.7.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,925 Found link https://files.pythonhosted.org/packages/23/a7/8d747c84137a1e531297ec6214a266a8e4fcc612fdc733941bed32d817a0/scirpy-0.7.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.7.1 2022-11-20T13:03:45,925 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/22/4b/100ce2a068b154236e9680826ccf88bb044f3ab88abab2d679e6a7d891ca/scirpy-0.8.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,926 Found link https://files.pythonhosted.org/packages/23/0c/a6fea62e0108d0d6da6a95fc66d6294c442adab16e826cfc86c098a94516/scirpy-0.8.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.8.0 2022-11-20T13:03:45,926 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/1b/5f/74307d956743fb0a8b2df31e097c566b41e51e2f5a199d497e59cdc68b1d/scirpy-0.9.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,927 Found link https://files.pythonhosted.org/packages/d9/6e/fe4eb190bc89f54014dd60ff6ea0154bce51a6b57417fd6fe6229a1fefc9/scirpy-0.9.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.9.0 2022-11-20T13:03:45,927 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/05/95/feeb11b123bf186801911ad7a9c6ee4004f6e21c288bf8c032a332ac85c1/scirpy-0.9.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,927 Found link https://files.pythonhosted.org/packages/e2/b8/d088a38f5f3db0901415ede0c2a202e885eaceea78eff8ee68701fa0c1dc/scirpy-0.9.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.9.1 2022-11-20T13:03:45,928 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/80/cb/393c2849475c3a1b49ff533130f18e1d8382ba74591abf0bc27806519c81/scirpy-0.10.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,928 Found link https://files.pythonhosted.org/packages/c9/7f/5df1ca820d517fcf8cce6ec3ca1a569e57ce17e225446b606cab9cb38b8c/scirpy-0.10.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.10.0 2022-11-20T13:03:45,928 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/e0/09/eae7acbff3a8e82722378549ea5fddd07c2711d0aa8b2bf9056bae31c176/scirpy-0.10.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,929 Found link https://files.pythonhosted.org/packages/12/9b/171147b32e198a14c5842216ed08b8eaea20472057366abab2cfe83c3ff1/scirpy-0.10.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.10.1 2022-11-20T13:03:45,929 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/df/99/f9d8a66d824151d3ee0e7bcba9ac87fb40c411506e8e5f5391762e90b8ab/scirpy-0.11.0-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,930 Found link https://files.pythonhosted.org/packages/c8/57/775aab2598fdce44dc61b229caebaa27c947248e7ba8e94a0efa23864915/scirpy-0.11.0.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.11.0 2022-11-20T13:03:45,930 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/6f/80/075a295e0b6c6532da10e46b367a85a56d5d70d85de8b90979dcd6632960/scirpy-0.11.1-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,931 Found link https://files.pythonhosted.org/packages/a3/b4/2d2703afc91286704d7b9d0f6aea416a2c61ab8ba60521e1bdafc7b19a42/scirpy-0.11.1.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.11.1 2022-11-20T13:03:45,931 Skipping link: No binaries permitted for scirpy: https://files.pythonhosted.org/packages/7e/b5/8b50aa1c023dd8fda3662903f521df1ef0121a5f1ed9edad327841190804/scirpy-0.11.2-py3-none-any.whl (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:45,932 Found link https://files.pythonhosted.org/packages/29/4f/586959086f4cbed10ccfd853e7d67feb0b2fb498ea2caad548747fa7146a/scirpy-0.11.2.tar.gz (from https://pypi.org/simple/scirpy/) (requires-python:>= 3.7), version: 0.11.2 2022-11-20T13:03:45,932 Fetching project page and analyzing links: https://www.piwheels.org/simple/scirpy/ 2022-11-20T13:03:45,932 Getting page https://www.piwheels.org/simple/scirpy/ 2022-11-20T13:03:45,933 Found index url https://www.piwheels.org/simple 2022-11-20T13:03:46,108 Fetched page https://www.piwheels.org/simple/scirpy/ as text/html 2022-11-20T13:03:46,113 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.7.1-py3-none-any.whl#sha256=69e8dc9dae84cc51d9cb9477f01204b2b1a4c59c77603b5d61c6783377c1ef04 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:46,113 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.7.0-py3-none-any.whl#sha256=02472c885a3b34de4c2b9efc2c5245c89f0797c5bd1e290e4a13d248b6e48c48 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.7) 2022-11-20T13:03:46,114 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.6.1-py3-none-any.whl#sha256=cbbcc5359458e7356a028fd1df93b29a2ad70b144aaa1e60d0b8c987b838d09a (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,114 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.6.0-py3-none-any.whl#sha256=4159c1d1d2276b4117f1480988e0ed6c0274423f2eb90025b3b57f00a9ba52cb (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,114 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.5.0-py3-none-any.whl#sha256=64fe5acd51fdfc526c91120194c62a550442213d24e211a65413d5248bd59210 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,114 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4.2-py3-none-any.whl#sha256=94b375a1b22af39bb3521f68a7356de4e8a802f2332df1da934a5278bffa1517 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,115 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4.1-py3-none-any.whl#sha256=94277a3c51aaaa08bfab88b21fd94cf17e90dd64b7dfbbf9aba75797086281b1 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,115 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.4-py3-none-any.whl#sha256=5f29f02aeffe7e2b896f510b5d10b3acba723fe6737ee8848e4b2437d7299a74 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,115 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.3-py3-none-any.whl#sha256=0dd0b007ff097c3c5dda11f41ed6d6ec5ce58c888e6087660af54baac30da09a (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,115 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.2-py3-none-any.whl#sha256=2e8f0e0c05a18e8de13fe274c1ed0cae0cbdeb36c750990292fc7df6a84d99b2 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,115 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1.2-py3-none-any.whl#sha256=178a9a8d5541e5c985f13182b1efe798a6a23a13698564085b98adc23a44b48b (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,116 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1.1-py3-none-any.whl#sha256=ffb0ff81dc70197eb475e6b10036b2138a63947eb27a654a2669506c75667d27 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,116 Skipping link: No binaries permitted for scirpy: https://www.piwheels.org/simple/scirpy/scirpy-0.1-py3-none-any.whl#sha256=e6dcea649c4445ca4da678562bacdf2a747a684ace877dc68d9d64710e70e137 (from https://www.piwheels.org/simple/scirpy/) (requires-python:>= 3.6) 2022-11-20T13:03:46,116 Skipping link: not a file: https://www.piwheels.org/simple/scirpy/ 2022-11-20T13:03:46,116 Skipping link: not a file: https://pypi.org/simple/scirpy/ 2022-11-20T13:03:46,137 Given no hashes to check 1 links for project 'scirpy': discarding no candidates 2022-11-20T13:03:46,154 Collecting scirpy==0.11.2 2022-11-20T13:03:46,156 Created temporary directory: /tmp/pip-unpack-tnkesque 2022-11-20T13:03:46,206 Downloading scirpy-0.11.2.tar.gz (25.6 MB) 2022-11-20T13:03:49,524 Added scirpy==0.11.2 from https://files.pythonhosted.org/packages/29/4f/586959086f4cbed10ccfd853e7d67feb0b2fb498ea2caad548747fa7146a/scirpy-0.11.2.tar.gz to build tracker '/tmp/pip-build-tracker-zhv5s12j' 2022-11-20T13:03:49,536 Created temporary directory: /tmp/pip-build-env-bqicltjx 2022-11-20T13:03:49,543 Installing build dependencies: started 2022-11-20T13:03:49,544 Running command pip subprocess to install build dependencies 2022-11-20T13:03:50,730 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-11-20T13:03:51,115 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-20T13:03:51,139 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-20T13:03:51,141 Ignoring importlib_metadata: markers 'python_version < "3.8"' don't match your environment 2022-11-20T13:03:51,500 Collecting flit_core<4,>=2 2022-11-20T13:03:51,519 Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.8.0-py3-none-any.whl (62 kB) 2022-11-20T13:03:51,868 Collecting setuptools_scm 2022-11-20T13:03:51,904 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-11-20T13:03:52,380 Collecting pytoml 2022-11-20T13:03:52,424 Using cached https://www.piwheels.org/simple/pytoml/pytoml-0.1.21-py2.py3-none-any.whl (8.5 kB) 2022-11-20T13:03:52,652 Collecting wheel 2022-11-20T13:03:52,676 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-11-20T13:03:52,837 Collecting typing-extensions 2022-11-20T13:03:52,854 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-11-20T13:03:52,991 Collecting tomli>=1.0.0 2022-11-20T13:03:53,007 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-11-20T13:03:54,470 Collecting setuptools 2022-11-20T13:03:54,623 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-20T13:03:54,890 Collecting packaging>=20.0 2022-11-20T13:03:54,908 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-20T13:03:55,220 Collecting pyparsing!=3.0.5,>=2.0.2 2022-11-20T13:03:55,239 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-11-20T13:03:57,286 Installing collected packages: pytoml, wheel, typing-extensions, tomli, setuptools, pyparsing, flit_core, packaging, setuptools_scm 2022-11-20T13:03:57,493 Creating /tmp/pip-build-env-bqicltjx/overlay/bin 2022-11-20T13:03:57,495 changing mode of /tmp/pip-build-env-bqicltjx/overlay/bin/wheel to 755 2022-11-20T13:04:01,045 Successfully installed flit_core-3.8.0 packaging-21.3 pyparsing-3.0.9 pytoml-0.1.21 setuptools-65.6.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 2022-11-20T13:04:01,060 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-20T13:04:01,060 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-20T13:04:01,352 Installing build dependencies: finished with status 'done' 2022-11-20T13:04:01,357 Getting requirements to build wheel: started 2022-11-20T13:04:01,358 Running command Getting requirements to build wheel 2022-11-20T13:04:01,677 Getting requirements to build wheel: finished with status 'done' 2022-11-20T13:04:01,883 Installing backend dependencies: started 2022-11-20T13:04:01,884 Running command pip subprocess to install backend dependencies 2022-11-20T13:04:03,083 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-11-20T13:04:03,476 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-20T13:04:03,500 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-20T13:04:03,954 Collecting parasail!=1.2.1 2022-11-20T13:04:03,990 Downloading https://www.piwheels.org/simple/parasail/parasail-1.3.3-py2.py3-none-linux_armv7l.whl (7.2 MB) 2022-11-20T13:04:04,692 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 7.2/7.2 MB 10.3 MB/s eta 0:00:00 2022-11-20T13:04:04,992 Collecting python-levenshtein 2022-11-20T13:04:05,011 Downloading https://www.piwheels.org/simple/python-levenshtein/python_Levenshtein-0.20.8-py3-none-any.whl (9.4 kB) 2022-11-20T13:04:05,541 Collecting tqdm>=4.44.1 2022-11-20T13:04:05,618 Using cached https://www.piwheels.org/simple/tqdm/tqdm-4.64.1-py2.py3-none-any.whl (78 kB) 2022-11-20T13:04:06,417 Collecting scikit-learn 2022-11-20T13:04:08,752 Using cached https://www.piwheels.org/simple/scikit-learn/scikit_learn-1.1.3-cp39-cp39-linux_armv7l.whl (26.0 MB) 2022-11-20T13:04:10,291 Collecting scipy 2022-11-20T13:04:16,965 Using cached https://www.piwheels.org/simple/scipy/SciPy-1.8.1-cp39-cp39-linux_armv7l.whl (72.2 MB) 2022-11-20T13:04:19,407 Link requires a different Python (3.9.2 not in: '>=3.6,<3.9'): https://files.pythonhosted.org/packages/d1/68/d872f91bcb57c00c54835beb950a9d9ceb99e497f167fa333e8eba968ecc/numba-0.52.0rc3.tar.gz (from https://pypi.org/simple/numba/) (requires-python:>=3.6,<3.9) 2022-11-20T13:04:19,413 Link requires a different Python (3.9.2 not in: '>=3.6,<3.9'): https://files.pythonhosted.org/packages/46/e1/cbbc7c7967d9b10e54c852bf5bece0222a63bfb809d3354014c957ef1bda/numba-0.52.0.tar.gz (from https://pypi.org/simple/numba/) (requires-python:>=3.6,<3.9) 2022-11-20T13:04:20,052 Collecting numba>=0.41.0 2022-11-20T13:04:20,075 Downloading https://www.piwheels.org/simple/numba/numba-0.56.4-cp39-cp39-linux_armv7l.whl (3.1 MB) 2022-11-20T13:04:20,373 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.1/3.1 MB 10.8 MB/s eta 0:00:00 2022-11-20T13:04:20,736 Collecting networkx>=2.5 2022-11-20T13:04:20,945 Using cached https://www.piwheels.org/simple/networkx/networkx-2.8.8-py3-none-any.whl (2.0 MB) 2022-11-20T13:04:22,437 Collecting numpy>=1.17.0 2022-11-20T13:04:23,533 Using cached https://www.piwheels.org/simple/numpy/numpy-1.23.5-cp39-cp39-linux_armv7l.whl (12.4 MB) 2022-11-20T13:04:24,029 Collecting airr>=1.2 2022-11-20T13:04:24,043 Downloading https://www.piwheels.org/simple/airr/airr-1.4.1-py3-none-any.whl (46 kB) 2022-11-20T13:04:24,061 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 46.4/46.4 kB 3.9 MB/s eta 0:00:00 2022-11-20T13:04:24,223 Collecting adjustText>=0.7 2022-11-20T13:04:24,245 Using cached https://www.piwheels.org/simple/adjusttext/adjustText-0.7.3-py3-none-any.whl (7.8 kB) 2022-11-20T13:04:25,130 Collecting pandas>=1.0 2022-11-20T13:04:28,779 Using cached https://www.piwheels.org/simple/pandas/pandas-1.5.1-cp39-cp39-linux_armv7l.whl (37.5 MB) 2022-11-20T13:04:30,198 Collecting python-igraph!=0.10.0,!=0.10.1 2022-11-20T13:04:30,242 Downloading https://www.piwheels.org/simple/python-igraph/python_igraph-0.10.2-py3-none-any.whl (9.1 kB) 2022-11-20T13:04:30,464 Collecting anndata>=0.7.6 2022-11-20T13:04:30,487 Using cached https://www.piwheels.org/simple/anndata/anndata-0.8.0-py3-none-any.whl (96 kB) 2022-11-20T13:04:30,672 Collecting squarify 2022-11-20T13:04:30,693 Downloading https://www.piwheels.org/simple/squarify/squarify-0.4.3-py3-none-any.whl (4.3 kB) 2022-11-20T13:04:30,975 Collecting scanpy>=1.6.0 2022-11-20T13:04:31,042 Downloading scanpy-1.9.1-py3-none-any.whl (2.0 MB) 2022-11-20T13:04:31,252 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.0/2.0 MB 10.0 MB/s eta 0:00:00 2022-11-20T13:04:32,146 Collecting Levenshtein==0.20.8 2022-11-20T13:04:32,160 Downloading Levenshtein-0.20.8.tar.gz (122 kB) 2022-11-20T13:04:32,185 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 122.9/122.9 kB 7.2 MB/s eta 0:00:00 2022-11-20T13:04:32,367 Installing build dependencies: started 2022-11-20T13:04:32,368 Running command pip subprocess to install build dependencies 2022-11-20T13:04:33,942 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-20T13:04:33,966 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-20T13:04:35,573 Collecting setuptools 2022-11-20T13:04:35,706 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-20T13:04:36,001 Collecting scikit-build>=0.13.0 2022-11-20T13:04:36,189 Using cached https://www.piwheels.org/simple/scikit-build/scikit_build-0.16.2-py3-none-any.whl (78 kB) 2022-11-20T13:04:36,755 Collecting distro 2022-11-20T13:04:36,773 Using cached https://www.piwheels.org/simple/distro/distro-1.8.0-py3-none-any.whl (20 kB) 2022-11-20T13:04:36,999 Collecting wheel>=0.32.0 2022-11-20T13:04:37,017 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-11-20T13:04:37,184 Collecting packaging 2022-11-20T13:04:37,202 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-20T13:04:37,469 Collecting pyparsing!=3.0.5,>=2.0.2 2022-11-20T13:04:37,491 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-11-20T13:04:39,552 Installing collected packages: wheel, setuptools, pyparsing, distro, packaging, scikit-build 2022-11-20T13:04:42,982 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2022-11-20T13:04:42,982 conan 1.53.0 requires distro<=1.7.0,>=1.0.2; sys_platform == "linux" or sys_platform == "linux2", but you have distro 1.8.0 which is incompatible. 2022-11-20T13:04:42,982 Successfully installed distro-1.8.0 packaging-21.3 pyparsing-3.0.9 scikit-build-0.16.2 setuptools-65.6.0 wheel-0.38.4 2022-11-20T13:04:42,996 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-20T13:04:42,997 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-20T13:04:43,270 Installing build dependencies: finished with status 'done' 2022-11-20T13:04:43,275 Getting requirements to build wheel: started 2022-11-20T13:04:43,277 Running command Getting requirements to build wheel 2022-11-20T13:04:44,535 Using System version of cmake 2022-11-20T13:04:44,537 Using System version of ninja 2022-11-20T13:04:44,538 running egg_info 2022-11-20T13:04:44,542 writing src/Levenshtein.egg-info/PKG-INFO 2022-11-20T13:04:44,544 writing dependency_links to src/Levenshtein.egg-info/dependency_links.txt 2022-11-20T13:04:44,547 writing requirements to src/Levenshtein.egg-info/requires.txt 2022-11-20T13:04:44,549 writing top-level names to src/Levenshtein.egg-info/top_level.txt 2022-11-20T13:04:44,560 reading manifest file 'src/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:04:44,570 reading manifest template 'MANIFEST.in' 2022-11-20T13:04:44,584 warning: no files found matching '*.h' under directory 'src/Levenshtein' 2022-11-20T13:04:44,599 warning: no files found matching '*.pxd' under directory 'src/Levenshtein' 2022-11-20T13:04:44,638 adding license file 'COPYING' 2022-11-20T13:04:44,643 writing manifest file 'src/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:04:44,805 Getting requirements to build wheel: finished with status 'done' 2022-11-20T13:04:44,820 Preparing metadata (pyproject.toml): started 2022-11-20T13:04:44,821 Running command Preparing metadata (pyproject.toml) 2022-11-20T13:04:45,881 running dist_info 2022-11-20T13:04:45,883 creating /tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info 2022-11-20T13:04:45,888 writing /tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/PKG-INFO 2022-11-20T13:04:45,891 writing dependency_links to /tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/dependency_links.txt 2022-11-20T13:04:45,893 writing requirements to /tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/requires.txt 2022-11-20T13:04:45,894 writing top-level names to /tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/top_level.txt 2022-11-20T13:04:45,896 writing manifest file '/tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:04:45,905 reading manifest file '/tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:04:45,909 reading manifest template 'MANIFEST.in' 2022-11-20T13:04:45,922 warning: no files found matching '*.h' under directory 'src/Levenshtein' 2022-11-20T13:04:45,936 warning: no files found matching '*.pxd' under directory 'src/Levenshtein' 2022-11-20T13:04:45,973 adding license file 'COPYING' 2022-11-20T13:04:45,977 writing manifest file '/tmp/pip-modern-metadata-m22b3o8e/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:04:45,978 creating '/tmp/pip-modern-metadata-m22b3o8e/Levenshtein-0.20.8.dist-info' 2022-11-20T13:04:46,158 Preparing metadata (pyproject.toml): finished with status 'done' 2022-11-20T13:04:49,403 Collecting rapidfuzz<3.0.0,>=2.3.0 2022-11-20T13:04:49,443 Downloading https://www.piwheels.org/simple/rapidfuzz/rapidfuzz-2.13.2-cp39-cp39-linux_armv7l.whl (1.7 MB) 2022-11-20T13:04:49,619 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.7/1.7 MB 10.1 MB/s eta 0:00:00 2022-11-20T13:04:49,956 Collecting threadpoolctl>=2.0.0 2022-11-20T13:04:50,025 Using cached https://www.piwheels.org/simple/threadpoolctl/threadpoolctl-3.1.0-py3-none-any.whl (14 kB) 2022-11-20T13:04:50,311 Collecting joblib>=1.0.0 2022-11-20T13:04:50,378 Using cached https://www.piwheels.org/simple/joblib/joblib-1.2.0-py3-none-any.whl (297 kB) 2022-11-20T13:04:51,018 Collecting llvmlite<0.40,>=0.39.0dev0 2022-11-20T13:04:51,036 Using cached llvmlite-0.39.1.tar.gz (132 kB) 2022-11-20T13:04:51,234 Preparing metadata (setup.py): started 2022-11-20T13:04:51,235 Running command python setup.py egg_info 2022-11-20T13:04:52,318 running egg_info 2022-11-20T13:04:52,319 creating /tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info 2022-11-20T13:04:52,343 writing /tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/PKG-INFO 2022-11-20T13:04:52,346 writing dependency_links to /tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/dependency_links.txt 2022-11-20T13:04:52,348 writing top-level names to /tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/top_level.txt 2022-11-20T13:04:52,350 writing manifest file '/tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/SOURCES.txt' 2022-11-20T13:04:52,409 reading manifest file '/tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/SOURCES.txt' 2022-11-20T13:04:52,410 adding license file 'LICENSE' 2022-11-20T13:04:52,414 writing manifest file '/tmp/pip-pip-egg-info-046tt11y/llvmlite.egg-info/SOURCES.txt' 2022-11-20T13:04:52,539 Preparing metadata (setup.py): finished with status 'done' 2022-11-20T13:04:54,007 Collecting setuptools 2022-11-20T13:04:54,118 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-20T13:04:54,392 Collecting yamlordereddictloader>=0.4.0 2022-11-20T13:04:54,413 Downloading https://www.piwheels.org/simple/yamlordereddictloader/yamlordereddictloader-0.4.0-py3-none-any.whl (5.1 kB) 2022-11-20T13:04:54,733 Collecting pyyaml>=3.12 2022-11-20T13:04:54,751 Using cached https://www.piwheels.org/simple/pyyaml/PyYAML-6.0-cp39-cp39-linux_armv7l.whl (45 kB) 2022-11-20T13:04:56,042 Collecting matplotlib 2022-11-20T13:04:57,135 Using cached https://www.piwheels.org/simple/matplotlib/matplotlib-3.6.2-cp39-cp39-linux_armv7l.whl (10.7 MB) 2022-11-20T13:04:57,611 Collecting python-dateutil>=2.8.1 2022-11-20T13:04:57,638 Using cached https://www.piwheels.org/simple/python-dateutil/python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) 2022-11-20T13:04:58,074 Collecting pytz>=2020.1 2022-11-20T13:04:58,127 Using cached pytz-2022.6-py2.py3-none-any.whl (498 kB) 2022-11-20T13:04:58,446 Collecting igraph==0.10.2 2022-11-20T13:04:58,516 Downloading https://www.piwheels.org/simple/igraph/igraph-0.10.2-cp39-abi3-linux_armv7l.whl (2.2 MB) 2022-11-20T13:04:58,713 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.2/2.2 MB 11.5 MB/s eta 0:00:00 2022-11-20T13:04:58,975 Collecting texttable>=1.6.2 2022-11-20T13:04:58,986 Downloading https://www.piwheels.org/simple/texttable/texttable-1.6.4-py2.py3-none-any.whl (10 kB) 2022-11-20T13:04:59,339 Collecting natsort 2022-11-20T13:04:59,359 Using cached https://www.piwheels.org/simple/natsort/natsort-8.2.0-py3-none-any.whl (37 kB) 2022-11-20T13:04:59,528 Collecting packaging>=20 2022-11-20T13:04:59,547 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-20T13:05:00,082 Collecting h5py>=3 2022-11-20T13:05:00,685 Using cached https://www.piwheels.org/simple/h5py/h5py-3.7.0-cp39-cp39-linux_armv7l.whl (5.7 MB) 2022-11-20T13:05:01,269 Collecting seaborn 2022-11-20T13:05:01,319 Using cached https://www.piwheels.org/simple/seaborn/seaborn-0.12.1-py3-none-any.whl (288 kB) 2022-11-20T13:05:01,755 Collecting statsmodels>=0.10.0rc2 2022-11-20T13:05:01,823 Downloading https://www.piwheels.org/simple/statsmodels/statsmodels-0.13.5-cp39-cp39-linux_armv7l.whl (19.9 MB) 2022-11-20T13:05:03,622 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 19.9/19.9 MB 7.9 MB/s eta 0:00:00 2022-11-20T13:05:04,662 Collecting patsy 2022-11-20T13:05:04,742 Using cached 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2022-11-20T13:05:10,424 Using cached https://www.piwheels.org/simple/stdlib-list/stdlib_list-0.8.0-py3-none-any.whl (63 kB) 2022-11-20T13:05:11,256 Building wheels for collected packages: Levenshtein, llvmlite 2022-11-20T13:05:11,263 Building wheel for Levenshtein (pyproject.toml): started 2022-11-20T13:05:11,263 Running command Building wheel for Levenshtein (pyproject.toml) 2022-11-20T13:05:12,355 -------------------------------------------------------------------------------- 2022-11-20T13:05:12,355 -- Trying "Ninja" generator 2022-11-20T13:05:12,356 -------------------------------- 2022-11-20T13:05:12,357 --------------------------- 2022-11-20T13:05:12,358 ---------------------- 2022-11-20T13:05:12,359 ----------------- 2022-11-20T13:05:12,360 ------------ 2022-11-20T13:05:12,361 ------- 2022-11-20T13:05:12,363 -- 2022-11-20T13:05:12,402 Not searching for unused variables given on the command line. 2022-11-20T13:05:12,771 -- The C compiler identification is GNU 10.2.1 2022-11-20T13:05:12,867 -- Detecting C compiler ABI info 2022-11-20T13:05:13,219 -- Detecting C compiler ABI info - done 2022-11-20T13:05:13,271 -- Check for working C compiler: /usr/bin/cc - skipped 2022-11-20T13:05:13,273 -- Detecting C compile features 2022-11-20T13:05:13,275 -- Detecting C compile features - done 2022-11-20T13:05:13,601 -- The CXX compiler identification is GNU 10.2.1 2022-11-20T13:05:13,642 -- Detecting CXX compiler ABI info 2022-11-20T13:05:13,992 -- Detecting CXX compiler ABI info - done 2022-11-20T13:05:14,058 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2022-11-20T13:05:14,059 -- Detecting CXX compile features 2022-11-20T13:05:14,062 -- Detecting CXX compile features - done 2022-11-20T13:05:14,071 -- Configuring done 2022-11-20T13:05:14,081 -- Generating done 2022-11-20T13:05:14,123 -- Build files have been written to: /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/_cmake_test_compile/build 2022-11-20T13:05:14,132 -- 2022-11-20T13:05:14,133 ------- 2022-11-20T13:05:14,135 ------------ 2022-11-20T13:05:14,136 ----------------- 2022-11-20T13:05:14,138 ---------------------- 2022-11-20T13:05:14,139 --------------------------- 2022-11-20T13:05:14,141 -------------------------------- 2022-11-20T13:05:14,142 -- Trying "Ninja" generator - success 2022-11-20T13:05:14,143 -------------------------------------------------------------------------------- 2022-11-20T13:05:14,152 Configuring Project 2022-11-20T13:05:14,153 Working directory: 2022-11-20T13:05:14,155 /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/_skbuild/linux-armv7l-3.9/cmake-build 2022-11-20T13:05:14,156 Command: 2022-11-20T13:05:14,158 cmake /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5 -G Ninja -DCMAKE_INSTALL_PREFIX:PATH=/tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/_skbuild/linux-armv7l-3.9/cmake-install -DPYTHON_VERSION_STRING:STRING=3.9.2 -DSKBUILD:INTERNAL=TRUE -DCMAKE_MODULE_PATH:PATH=/tmp/pip-build-env-vm3dn6up/overlay/lib/python3.9/site-packages/skbuild/resources/cmake -DPYTHON_EXECUTABLE:PATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.9 -DPYTHON_LIBRARY:PATH=/usr/lib/arm-linux-gnueabihf/libpython3.9.so -DPython_EXECUTABLE:PATH=/usr/bin/python3 -DPython_ROOT_DIR:PATH=/usr -DPython_INCLUDE_DIR:PATH=/usr/include/python3.9 -DPython_FIND_REGISTRY:STRING=NEVER -DPython3_EXECUTABLE:PATH=/usr/bin/python3 -DPython3_ROOT_DIR:PATH=/usr -DPython3_INCLUDE_DIR:PATH=/usr/include/python3.9 -DPython3_FIND_REGISTRY:STRING=NEVER -DCMAKE_BUILD_TYPE:STRING=Release 2022-11-20T13:05:14,477 -- The C compiler identification is GNU 10.2.1 2022-11-20T13:05:14,806 -- The CXX compiler identification is GNU 10.2.1 2022-11-20T13:05:14,855 -- Detecting C compiler ABI info 2022-11-20T13:05:15,130 -- Detecting C compiler ABI info - done 2022-11-20T13:05:15,176 -- Check for working C compiler: /usr/bin/cc - skipped 2022-11-20T13:05:15,177 -- Detecting C compile features 2022-11-20T13:05:15,179 -- Detecting C compile features - done 2022-11-20T13:05:15,200 -- Detecting CXX compiler ABI info 2022-11-20T13:05:15,527 -- Detecting CXX compiler ABI info - done 2022-11-20T13:05:15,593 -- Check for working CXX compiler: /usr/bin/c++ - skipped 2022-11-20T13:05:15,595 -- Detecting CXX compile features 2022-11-20T13:05:15,599 -- Detecting CXX compile features - done 2022-11-20T13:05:17,399 -- Found Python: /usr/bin/python3 (found version "3.9.2") found components: Interpreter Development.Module 2022-11-20T13:05:17,835 -- Using packaged version of rapidfuzz-cpp 2022-11-20T13:05:17,879 -- Configuring done 2022-11-20T13:05:17,920 -- Generating done 2022-11-20T13:05:17,970 CMake Warning: 2022-11-20T13:05:17,971 Manually-specified variables were not used by the project: 2022-11-20T13:05:17,974 PYTHON_EXECUTABLE 2022-11-20T13:05:17,975 PYTHON_INCLUDE_DIR 2022-11-20T13:05:17,976 PYTHON_LIBRARY 2022-11-20T13:05:17,978 PYTHON_VERSION_STRING 2022-11-20T13:05:17,979 Python3_EXECUTABLE 2022-11-20T13:05:17,981 Python3_FIND_REGISTRY 2022-11-20T13:05:17,982 Python3_INCLUDE_DIR 2022-11-20T13:05:17,983 Python3_ROOT_DIR 2022-11-20T13:05:17,984 SKBUILD 2022-11-20T13:05:17,988 -- Build files have been written to: /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/_skbuild/linux-armv7l-3.9/cmake-build 2022-11-20T13:05:24,766 [1/4] Building CXX object src/Levenshtein/CMakeFiles/levenshtein_cpp.dir/Levenshtein-c/_levenshtein.cpp.o 2022-11-20T13:05:33,134 [2/4] Building CXX object src/Levenshtein/CMakeFiles/levenshtein_cpp.dir/levenshtein_cpp.cxx.o 2022-11-20T13:06:15,605 [3/4] Linking CXX shared module src/Levenshtein/levenshtein_cpp.cpython-39-arm-linux-gnueabihf.so 2022-11-20T13:06:15,606 [3/4] Install the project... 2022-11-20T13:06:15,653 -- Install configuration: "Release" 2022-11-20T13:06:15,661 -- Installing: /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/_skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/levenshtein_cpp.cpython-39-arm-linux-gnueabihf.so 2022-11-20T13:06:15,694 copying src/Levenshtein/StringMatcher.py -> _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/StringMatcher.py 2022-11-20T13:06:15,697 copying src/Levenshtein/__init__.py -> _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/__init__.py 2022-11-20T13:06:15,701 copying /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/src/Levenshtein/__init__.pyi -> _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/__init__.pyi 2022-11-20T13:06:15,705 copying /tmp/pip-install-k9do70bc/levenshtein_834e89ecb9bf414e9b9de19feca5a5e5/src/Levenshtein/py.typed -> _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/py.typed 2022-11-20T13:06:15,742 running bdist_wheel 2022-11-20T13:06:15,751 running build 2022-11-20T13:06:15,752 running build_py 2022-11-20T13:06:15,755 creating _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39 2022-11-20T13:06:15,757 creating _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,759 copying _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/StringMatcher.py -> _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,763 copying _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/__init__.py -> _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,768 copying _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/__init__.pyi -> _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,771 copying _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/py.typed -> _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,775 copying _skbuild/linux-armv7l-3.9/cmake-install/src/Levenshtein/levenshtein_cpp.cpython-39-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein 2022-11-20T13:06:15,788 copied 2 files 2022-11-20T13:06:15,788 running build_ext 2022-11-20T13:06:15,789 installing to _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel 2022-11-20T13:06:15,790 running install 2022-11-20T13:06:15,819 running install_lib 2022-11-20T13:06:15,821 creating _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l 2022-11-20T13:06:15,822 creating _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel 2022-11-20T13:06:15,825 creating _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,826 copying _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein/levenshtein_cpp.cpython-39-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,840 copying _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein/StringMatcher.py -> _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,843 copying _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein/__init__.pyi -> _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,845 copying _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein/__init__.py -> _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,848 copying _skbuild/linux-armv7l-3.9/setuptools/lib.linux-armv7l-cpython-39/Levenshtein/py.typed -> _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein 2022-11-20T13:06:15,850 copied 5 files 2022-11-20T13:06:15,851 running install_egg_info 2022-11-20T13:06:15,864 running egg_info 2022-11-20T13:06:15,870 writing src/Levenshtein.egg-info/PKG-INFO 2022-11-20T13:06:15,873 writing dependency_links to src/Levenshtein.egg-info/dependency_links.txt 2022-11-20T13:06:15,874 writing requirements to src/Levenshtein.egg-info/requires.txt 2022-11-20T13:06:15,876 writing top-level names to src/Levenshtein.egg-info/top_level.txt 2022-11-20T13:06:15,886 reading manifest file 'src/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:06:15,895 reading manifest template 'MANIFEST.in' 2022-11-20T13:06:15,909 warning: no files found matching '*.h' under directory 'src/Levenshtein' 2022-11-20T13:06:15,924 warning: no files found matching '*.pxd' under directory 'src/Levenshtein' 2022-11-20T13:06:15,962 adding license file 'COPYING' 2022-11-20T13:06:15,968 writing manifest file 'src/Levenshtein.egg-info/SOURCES.txt' 2022-11-20T13:06:15,970 Copying src/Levenshtein.egg-info to _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein-0.20.8-py3.9.egg-info 2022-11-20T13:06:15,983 running install_scripts 2022-11-20T13:06:16,073 copied 0 files 2022-11-20T13:06:16,125 creating _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel/Levenshtein-0.20.8.dist-info/WHEEL 2022-11-20T13:06:16,128 creating '/tmp/pip-wheel-ft07l9t6/tmp06cclx25/Levenshtein-0.20.8-cp39-cp39-linux_armv7l.whl' and adding '_skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel' to it 2022-11-20T13:06:16,131 adding 'Levenshtein/StringMatcher.py' 2022-11-20T13:06:16,134 adding 'Levenshtein/__init__.py' 2022-11-20T13:06:16,136 adding 'Levenshtein/__init__.pyi' 2022-11-20T13:06:16,219 adding 'Levenshtein/levenshtein_cpp.cpython-39-arm-linux-gnueabihf.so' 2022-11-20T13:06:16,223 adding 'Levenshtein/py.typed' 2022-11-20T13:06:16,228 adding 'Levenshtein-0.20.8.dist-info/COPYING' 2022-11-20T13:06:16,229 adding 'Levenshtein-0.20.8.dist-info/METADATA' 2022-11-20T13:06:16,231 adding 'Levenshtein-0.20.8.dist-info/WHEEL' 2022-11-20T13:06:16,235 adding 'Levenshtein-0.20.8.dist-info/top_level.txt' 2022-11-20T13:06:16,236 adding 'Levenshtein-0.20.8.dist-info/RECORD' 2022-11-20T13:06:16,237 removing _skbuild/linux-armv7l-3.9/setuptools/bdist.linux-armv7l/wheel 2022-11-20T13:06:16,418 Building wheel for Levenshtein (pyproject.toml): finished with status 'done' 2022-11-20T13:06:16,436 Created wheel for Levenshtein: filename=Levenshtein-0.20.8-cp39-cp39-linux_armv7l.whl size=168259 sha256=28c9c079d2bd8fd65534fc9e0750f219541d8af2e1a24e6ff2d1b03190418523 2022-11-20T13:06:16,437 Stored in directory: /home/piwheels/.cache/pip/wheels/c8/83/be/35cbbe48e1c2bc94c92d0aa8d7658234dc7802c4bf7cc7fd14 2022-11-20T13:06:16,450 Building wheel for llvmlite (setup.py): started 2022-11-20T13:06:16,451 Running command python setup.py bdist_wheel 2022-11-20T13:06:17,551 running bdist_wheel 2022-11-20T13:06:17,583 /usr/bin/python3 /tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py 2022-11-20T13:06:17,800 LLVM version... Traceback (most recent call last): 2022-11-20T13:06:17,801 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 226, in 2022-11-20T13:06:17,802 main() 2022-11-20T13:06:17,803 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 216, in main 2022-11-20T13:06:17,803 main_posix('linux', '.so') 2022-11-20T13:06:17,804 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 135, in main_posix 2022-11-20T13:06:17,805 raise RuntimeError(msg) from None 2022-11-20T13:06:17,807 RuntimeError: Could not find a `llvm-config` binary. There are a number of reasons this could occur, please see: https://llvmlite.readthedocs.io/en/latest/admin-guide/install.html#using-pip for help. 2022-11-20T13:06:17,826 error: command '/usr/bin/python3' failed with exit code 1 2022-11-20T13:06:17,974 error: subprocess-exited-with-error 2022-11-20T13:06:17,974 × python setup.py bdist_wheel did not run successfully. 2022-11-20T13:06:17,974 │ exit code: 1 2022-11-20T13:06:17,975 ╰─> See above for output. 2022-11-20T13:06:17,975 note: This error originates from a subprocess, and is likely not a problem with pip. 2022-11-20T13:06:17,979 full command: /usr/bin/python3 -u -c ' 2022-11-20T13:06:17,979 exec(compile('"'"''"'"''"'"' 2022-11-20T13:06:17,979 # This is -- a caller that pip uses to run setup.py 2022-11-20T13:06:17,979 # 2022-11-20T13:06:17,980 # - It imports setuptools before invoking setup.py, to enable projects that directly 2022-11-20T13:06:17,980 # import from `distutils.core` to work with newer packaging standards. 2022-11-20T13:06:17,980 # - It provides a clear error message when setuptools is not installed. 2022-11-20T13:06:17,980 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2022-11-20T13:06:17,980 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2022-11-20T13:06:17,980 # manifest_maker: standard file '"'"'-c'"'"' not found". 2022-11-20T13:06:17,980 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2022-11-20T13:06:17,980 import os, sys, tokenize 2022-11-20T13:06:17,981 try: 2022-11-20T13:06:17,981 import setuptools 2022-11-20T13:06:17,981 except ImportError as error: 2022-11-20T13:06:17,981 print( 2022-11-20T13:06:17,981 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2022-11-20T13:06:17,981 "the build environment.", 2022-11-20T13:06:17,981 file=sys.stderr, 2022-11-20T13:06:17,982 ) 2022-11-20T13:06:17,982 sys.exit(1) 2022-11-20T13:06:17,982 __file__ = %r 2022-11-20T13:06:17,982 sys.argv[0] = __file__ 2022-11-20T13:06:17,982 if os.path.exists(__file__): 2022-11-20T13:06:17,982 filename = __file__ 2022-11-20T13:06:17,983 with tokenize.open(__file__) as f: 2022-11-20T13:06:17,983 setup_py_code = f.read() 2022-11-20T13:06:17,983 else: 2022-11-20T13:06:17,983 filename = "" 2022-11-20T13:06:17,983 setup_py_code = "from setuptools import setup; setup()" 2022-11-20T13:06:17,983 exec(compile(setup_py_code, filename, "exec")) 2022-11-20T13:06:17,983 '"'"''"'"''"'"' % ('"'"'/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-e0q6riur 2022-11-20T13:06:17,984 cwd: /tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ 2022-11-20T13:06:17,984 Building wheel for llvmlite (setup.py): finished with status 'error' 2022-11-20T13:06:17,984 ERROR: Failed building wheel for llvmlite 2022-11-20T13:06:17,984 Running setup.py clean for llvmlite 2022-11-20T13:06:17,984 Running command python setup.py clean 2022-11-20T13:06:19,000 running clean 2022-11-20T13:06:19,022 'build/lib.linux-armv7l-cpython-39' does not exist -- can't clean it 2022-11-20T13:06:19,023 'build/bdist.linux-armv7l' does not exist -- can't clean it 2022-11-20T13:06:19,024 'build/scripts-3.9' does not exist -- can't clean it 2022-11-20T13:06:19,026 removing '/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/llvmlite/__pycache__' (and everything under it) 2022-11-20T13:06:19,029 removing '/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/__pycache__' (and everything under it) 2022-11-20T13:06:19,150 Successfully built Levenshtein 2022-11-20T13:06:19,151 Failed to build llvmlite 2022-11-20T13:06:22,542 Installing collected packages: texttable, stdlib-list, squarify, pytz, tqdm, threadpoolctl, six, setuptools, session-info, rapidfuzz, pyyaml, pyparsing, pillow, numpy, networkx, natsort, llvmlite, kiwisolver, joblib, igraph, fonttools, cycler, yamlordereddictloader, scipy, python-igraph, python-dateutil, patsy, parasail, packaging, numba, Levenshtein, h5py, contourpy, scikit-learn, python-levenshtein, pandas, matplotlib, statsmodels, seaborn, pynndescent, anndata, airr, adjustText, umap-learn, scanpy 2022-11-20T13:06:24,090 Creating /tmp/pip-build-env-bqicltjx/normal/bin 2022-11-20T13:06:24,092 changing mode of /tmp/pip-build-env-bqicltjx/normal/bin/tqdm to 755 2022-11-20T13:06:37,784 changing mode of /tmp/pip-build-env-bqicltjx/normal/bin/f2py to 755 2022-11-20T13:06:37,786 changing mode of /tmp/pip-build-env-bqicltjx/normal/bin/f2py3 to 755 2022-11-20T13:06:37,788 changing mode of /tmp/pip-build-env-bqicltjx/normal/bin/f2py3.9 to 755 2022-11-20T13:06:43,704 changing mode of /tmp/pip-build-env-bqicltjx/normal/bin/natsort to 755 2022-11-20T13:06:43,713 Running setup.py install for llvmlite: started 2022-11-20T13:06:43,714 Running command Running setup.py install for llvmlite 2022-11-20T13:06:44,740 running install 2022-11-20T13:06:44,741 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-20T13:06:44,742 warnings.warn( 2022-11-20T13:06:44,773 running build 2022-11-20T13:06:44,774 got version from file /tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/llvmlite/_version.py {'version': '0.39.1', 'full': '31f808fa7a5796bb8d4b14e8a9e27c6dd15f2b6c'} 2022-11-20T13:06:44,775 running build_ext 2022-11-20T13:06:44,777 /usr/bin/python3 /tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py 2022-11-20T13:06:44,931 LLVM version... Traceback (most recent call last): 2022-11-20T13:06:44,931 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 226, in 2022-11-20T13:06:44,932 main() 2022-11-20T13:06:44,932 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 216, in main 2022-11-20T13:06:44,932 main_posix('linux', '.so') 2022-11-20T13:06:44,932 File "/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ffi/build.py", line 135, in main_posix 2022-11-20T13:06:44,932 raise RuntimeError(msg) from None 2022-11-20T13:06:44,933 RuntimeError: Could not find a `llvm-config` binary. There are a number of reasons this could occur, please see: https://llvmlite.readthedocs.io/en/latest/admin-guide/install.html#using-pip for help. 2022-11-20T13:06:44,948 error: command '/usr/bin/python3' failed with exit code 1 2022-11-20T13:06:45,084 error: subprocess-exited-with-error 2022-11-20T13:06:45,085 × Running setup.py install for llvmlite did not run successfully. 2022-11-20T13:06:45,085 │ exit code: 1 2022-11-20T13:06:45,085 ╰─> See above for output. 2022-11-20T13:06:45,085 note: This error originates from a subprocess, and is likely not a problem with pip. 2022-11-20T13:06:45,090 full command: /usr/bin/python3 -u -c ' 2022-11-20T13:06:45,091 exec(compile('"'"''"'"''"'"' 2022-11-20T13:06:45,091 # This is -- a caller that pip uses to run setup.py 2022-11-20T13:06:45,091 # 2022-11-20T13:06:45,091 # - It imports setuptools before invoking setup.py, to enable projects that directly 2022-11-20T13:06:45,091 # import from `distutils.core` to work with newer packaging standards. 2022-11-20T13:06:45,091 # - It provides a clear error message when setuptools is not installed. 2022-11-20T13:06:45,091 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2022-11-20T13:06:45,091 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2022-11-20T13:06:45,091 # manifest_maker: standard file '"'"'-c'"'"' not found". 2022-11-20T13:06:45,092 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2022-11-20T13:06:45,092 import os, sys, tokenize 2022-11-20T13:06:45,092 try: 2022-11-20T13:06:45,092 import setuptools 2022-11-20T13:06:45,092 except ImportError as error: 2022-11-20T13:06:45,092 print( 2022-11-20T13:06:45,092 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2022-11-20T13:06:45,092 "the build environment.", 2022-11-20T13:06:45,093 file=sys.stderr, 2022-11-20T13:06:45,093 ) 2022-11-20T13:06:45,093 sys.exit(1) 2022-11-20T13:06:45,093 __file__ = %r 2022-11-20T13:06:45,093 sys.argv[0] = __file__ 2022-11-20T13:06:45,093 if os.path.exists(__file__): 2022-11-20T13:06:45,093 filename = __file__ 2022-11-20T13:06:45,094 with tokenize.open(__file__) as f: 2022-11-20T13:06:45,094 setup_py_code = f.read() 2022-11-20T13:06:45,094 else: 2022-11-20T13:06:45,094 filename = "" 2022-11-20T13:06:45,094 setup_py_code = "from setuptools import setup; setup()" 2022-11-20T13:06:45,094 exec(compile(setup_py_code, filename, "exec")) 2022-11-20T13:06:45,094 '"'"''"'"''"'"' % ('"'"'/tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/setup.py'"'"',), "", "exec"))' install --record /tmp/pip-record-35hs7fi6/install-record.txt --single-version-externally-managed --prefix /tmp/pip-build-env-bqicltjx/normal --compile --install-headers /tmp/pip-build-env-bqicltjx/normal/include/python3.9/llvmlite 2022-11-20T13:06:45,096 cwd: /tmp/pip-install-k9do70bc/llvmlite_f2fe2042b1af44fb8a062a331e3b4248/ 2022-11-20T13:06:45,097 Running setup.py install for llvmlite: finished with status 'error' 2022-11-20T13:06:45,106 error: legacy-install-failure 2022-11-20T13:06:45,106 × Encountered error while trying to install package. 2022-11-20T13:06:45,106 ╰─> llvmlite 2022-11-20T13:06:45,106 note: This is an issue with the package mentioned above, not pip. 2022-11-20T13:06:45,106 hint: See above for output from the failure. 2022-11-20T13:06:45,125 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-20T13:06:45,125 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-20T13:06:46,643 ERROR: [present-rich] pip subprocess to install backend dependencies exited with 1 2022-11-20T13:06:46,661 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/__pip-runner__.py install --ignore-installed --no-user --prefix /tmp/pip-build-env-bqicltjx/normal --no-warn-script-location -v --no-binary scirpy --only-binary :none: -i https://pypi.org/simple --extra-index-url https://www.piwheels.org/simple --prefer-binary -- 'parasail != 1.2.1' python-levenshtein 'tqdm>=4.44.1' scikit-learn scipy 'numba>=0.41.0' 'networkx>=2.5' 'numpy>=1.17.0' 'airr>=1.2' 'adjustText>=0.7' 'pandas>=1.0' 'python-igraph != 0.10.0,!=0.10.1' 'anndata>=0.7.6' squarify 'scanpy>=1.6.0'[/] 2022-11-20T13:06:46,661 [bold magenta]cwd[/]: \[inherit] 2022-11-20T13:06:46,662 Installing backend dependencies: finished with status 'error' 2022-11-20T13:06:46,663 ERROR: [present-rich] pip subprocess to install backend dependencies exited with 1 2022-11-20T13:06:46,668 Exception information: 2022-11-20T13:06:46,668 Traceback (most recent call last): 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 160, in exc_logging_wrapper 2022-11-20T13:06:46,668 status = run_func(*args) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 247, in wrapper 2022-11-20T13:06:46,668 return func(self, options, args) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 170, in run 2022-11-20T13:06:46,668 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2022-11-20T13:06:46,668 result = self._result = resolver.resolve( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2022-11-20T13:06:46,668 state = resolution.resolve(requirements, max_rounds=max_rounds) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2022-11-20T13:06:46,668 self._add_to_criteria(self.state.criteria, r, parent=None) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria 2022-11-20T13:06:46,668 if not criterion.candidates: 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__ 2022-11-20T13:06:46,668 return bool(self._sequence) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2022-11-20T13:06:46,668 return any(self) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2022-11-20T13:06:46,668 return (c for c in iterator if id(c) not in self._incompatible_ids) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2022-11-20T13:06:46,668 candidate = func() 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2022-11-20T13:06:46,668 self._link_candidate_cache[link] = LinkCandidate( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 297, in __init__ 2022-11-20T13:06:46,668 super().__init__( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 162, in __init__ 2022-11-20T13:06:46,668 self.dist = self._prepare() 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 231, in _prepare 2022-11-20T13:06:46,668 dist = self._prepare_distribution() 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 308, in _prepare_distribution 2022-11-20T13:06:46,668 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 491, in prepare_linked_requirement 2022-11-20T13:06:46,668 return self._prepare_linked_requirement(req, parallel_builds) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 577, in _prepare_linked_requirement 2022-11-20T13:06:46,668 dist = _get_prepared_distribution( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2022-11-20T13:06:46,668 abstract_dist.prepare_distribution_metadata( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 48, in prepare_distribution_metadata 2022-11-20T13:06:46,668 self._install_build_reqs(finder) 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 122, in _install_build_reqs 2022-11-20T13:06:46,668 self.req.build_env.install_requirements( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/build_env.py", line 216, in install_requirements 2022-11-20T13:06:46,668 self._install_requirements( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/build_env.py", line 274, in _install_requirements 2022-11-20T13:06:46,668 call_subprocess( 2022-11-20T13:06:46,668 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2022-11-20T13:06:46,668 raise error 2022-11-20T13:06:46,668 pip._internal.exceptions.InstallationSubprocessError: pip subprocess to install backend dependencies exited with 1 2022-11-20T13:06:46,682 Removed scirpy==0.11.2 from https://files.pythonhosted.org/packages/29/4f/586959086f4cbed10ccfd853e7d67feb0b2fb498ea2caad548747fa7146a/scirpy-0.11.2.tar.gz from build tracker '/tmp/pip-build-tracker-zhv5s12j' 2022-11-20T13:06:46,683 Removed build tracker: '/tmp/pip-build-tracker-zhv5s12j'