2022-11-21T18:18:09,383 Created temporary directory: /tmp/pip-ephem-wheel-cache-c_594o31
2022-11-21T18:18:09,387 Created temporary directory: /tmp/pip-build-tracker-tghg7ljh
2022-11-21T18:18:09,388 Initialized build tracking at /tmp/pip-build-tracker-tghg7ljh
2022-11-21T18:18:09,388 Created build tracker: /tmp/pip-build-tracker-tghg7ljh
2022-11-21T18:18:09,388 Entered build tracker: /tmp/pip-build-tracker-tghg7ljh
2022-11-21T18:18:09,389 Created temporary directory: /tmp/pip-wheel-x7wu5_lf
2022-11-21T18:18:09,397 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-21T18:18:09,403 Created temporary directory: /tmp/pip-ephem-wheel-cache-qm01k07n
2022-11-21T18:18:09,453 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-21T18:18:09,460 2 location(s) to search for versions of pyreference:
2022-11-21T18:18:09,460 * https://pypi.org/simple/pyreference/
2022-11-21T18:18:09,460 * https://www.piwheels.org/simple/pyreference/
2022-11-21T18:18:09,462 Fetching project page and analyzing links: https://pypi.org/simple/pyreference/
2022-11-21T18:18:09,462 Getting page https://pypi.org/simple/pyreference/
2022-11-21T18:18:09,466 Found index url https://pypi.org/simple
2022-11-21T18:18:09,693 Fetched page https://pypi.org/simple/pyreference/ as application/vnd.pypi.simple.v1+json
2022-11-21T18:18:09,702   Found link https://files.pythonhosted.org/packages/5b/07/0aece74fb17241220b180b0f0c2b81311ccb4c4a8595b0f1cec258573365/pyreference-0.1.tar.gz (from https://pypi.org/simple/pyreference/), version: 0.1
2022-11-21T18:18:09,703   Found link https://files.pythonhosted.org/packages/ad/d1/ee3c548d96b8e9268897a98962ce4f41c61593c48a8c5ce5574fdd043ac7/pyreference-0.2.tar.gz (from https://pypi.org/simple/pyreference/), version: 0.2
2022-11-21T18:18:09,706   Found link https://files.pythonhosted.org/packages/8a/80/bc4588a7aa8d5d9e3341794147616aa5cbaf2cd837dd6d33c86b5105b91c/pyreference-0.3.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*), version: 0.3
2022-11-21T18:18:09,709   Found link https://files.pythonhosted.org/packages/e7/2a/bfa2d401fb7110ef307ca4b645fdbd8bb6fa30fa7f1a1b1cf46063492a96/pyreference-0.4.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*), version: 0.4
2022-11-21T18:18:09,709   Skipping link: No binaries permitted for pyreference: https://files.pythonhosted.org/packages/46/f0/22d0496ba5d5f102a17f9c01855f1af93ae3befd7e4427e6fa3b6cf42015/pyreference-0.5-py3-none-any.whl (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,711   Found link https://files.pythonhosted.org/packages/95/ae/6a13ab553f4e603f3a1fdc065c18ed7578256afa02cc0d420dbdd731cd01/pyreference-0.5.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5), version: 0.5
2022-11-21T18:18:09,712   Skipping link: No binaries permitted for pyreference: https://files.pythonhosted.org/packages/9a/de/4c54dc6a54bf0fdf958c2103053d8975bfa851f5abbc8a686ecccdb7eb75/pyreference-0.6-py3-none-any.whl (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,714   Found link https://files.pythonhosted.org/packages/da/89/dee8af2c8316b05c241741b58a2e0048d9614c594bcfab6106567e4ca9ca/pyreference-0.6.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5), version: 0.6
2022-11-21T18:18:09,714   Skipping link: No binaries permitted for pyreference: https://files.pythonhosted.org/packages/29/4c/07f27226f6f943bf8cc6fc0bbb78b8919364ad1bfc40c84c60c5052d3e11/pyreference-0.6.2-py3-none-any.whl (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,716   Found link https://files.pythonhosted.org/packages/90/77/7b9ac70138c7beb9d723240dc86b204f0f1aec798ba270909ec1d0194cd2/pyreference-0.6.2.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5), version: 0.6.2
2022-11-21T18:18:09,717   Skipping link: No binaries permitted for pyreference: https://files.pythonhosted.org/packages/fa/ba/da6e73b299b502c7a6aff99044aaf7247ab81dda77293edd6ad2d57c8cbb/pyreference-0.6.3-py3-none-any.whl (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,719   Found link https://files.pythonhosted.org/packages/c3/77/3931d8ed1e7d2a88563c22273c83a16ed2f2ce957c079715cf80f316b302/pyreference-0.6.3.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5), version: 0.6.3
2022-11-21T18:18:09,719   Skipping link: No binaries permitted for pyreference: https://files.pythonhosted.org/packages/b1/69/be05d0a25227d9e2da0d427fadb537589e4be9adea7100228c823153c959/pyreference-0.7.2-py3-none-any.whl (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,721   Found link https://files.pythonhosted.org/packages/1c/08/c06cd2fd7794434e72c3fca420e91d0c05927f3180ebe482850b12ca443a/pyreference-0.7.2.tar.gz (from https://pypi.org/simple/pyreference/) (requires-python:>=2.7, >=3.5), version: 0.7.2
2022-11-21T18:18:09,722 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyreference/
2022-11-21T18:18:09,723 Getting page https://www.piwheels.org/simple/pyreference/
2022-11-21T18:18:09,725 Found index url https://www.piwheels.org/simple
2022-11-21T18:18:09,953 Fetched page https://www.piwheels.org/simple/pyreference/ as text/html
2022-11-21T18:18:09,961   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.6.3-py3-none-any.whl#sha256=a94e05ded2b052f0717d218feec06c68dda220d288c045923cbfbcf1b95c1527 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,961   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.6.2-py3-none-any.whl#sha256=ed75dc76fc8526ae55d0b81edf3892f00ba47a75beac148436d89c0e17371d9d (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,962   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.6-py3-none-any.whl#sha256=9fdca54a7cfc6b5977be5004371a48cce5c30da90bb82294d67b10701ea61f62 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,963   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.5-py3-none-any.whl#sha256=d8c82f319aa4b54ea9e7d1c31dda085e59c589470492b9a88d3aa002d2edd690 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, >=3.5)
2022-11-21T18:18:09,963   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.4-py3-none-any.whl#sha256=a1747242708533f9620ba4248eb5b66bcef3c8312087bae2e7d1f6c6bc0e9319 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2022-11-21T18:18:09,964   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.3-py3-none-any.whl#sha256=3c830232db5b110a7940edf2f4e081d50da6b7e705a35c6412beefe9cb532755 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2022-11-21T18:18:09,964   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.2-py3-none-any.whl#sha256=d4bfa45c1222e865fbbf2875460da50b40b63d00b9b1a12503d31c4f54ff54b4 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2022-11-21T18:18:09,964   Skipping link: No binaries permitted for pyreference: https://www.piwheels.org/simple/pyreference/pyreference-0.1-py3-none-any.whl#sha256=9a206eb6abd17c782b0d0899d7d559fee6c2d859bc6b52b7a34d9011dca643b5 (from https://www.piwheels.org/simple/pyreference/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2022-11-21T18:18:09,965 Skipping link: not a file: https://www.piwheels.org/simple/pyreference/
2022-11-21T18:18:09,966 Skipping link: not a file: https://pypi.org/simple/pyreference/
2022-11-21T18:18:10,004 Given no hashes to check 1 links for project 'pyreference': discarding no candidates
2022-11-21T18:18:10,034 Collecting pyreference==0.7.2
2022-11-21T18:18:10,038   Created temporary directory: /tmp/pip-unpack-iqkavotd
2022-11-21T18:18:10,275   Downloading pyreference-0.7.2.tar.gz (22 kB)
2022-11-21T18:18:10,411   Added pyreference==0.7.2 from https://files.pythonhosted.org/packages/1c/08/c06cd2fd7794434e72c3fca420e91d0c05927f3180ebe482850b12ca443a/pyreference-0.7.2.tar.gz to build tracker '/tmp/pip-build-tracker-tghg7ljh'
2022-11-21T18:18:10,414   Running setup.py (path:/tmp/pip-wheel-x7wu5_lf/pyreference_860962ca355849dba8a3907763ca8c4b/setup.py) egg_info for package pyreference
2022-11-21T18:18:10,415   Created temporary directory: /tmp/pip-pip-egg-info-l1lp4i0v
2022-11-21T18:18:10,416   Preparing metadata (setup.py): started
2022-11-21T18:18:10,418   Running command python setup.py egg_info
2022-11-21T18:18:12,757   running egg_info
2022-11-21T18:18:12,762   creating /tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info
2022-11-21T18:18:12,817   writing /tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/PKG-INFO
2022-11-21T18:18:12,821   writing dependency_links to /tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/dependency_links.txt
2022-11-21T18:18:12,825   writing requirements to /tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/requires.txt
2022-11-21T18:18:12,827   writing top-level names to /tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/top_level.txt
2022-11-21T18:18:12,830   writing manifest file '/tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/SOURCES.txt'
2022-11-21T18:18:13,069   reading manifest file '/tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/SOURCES.txt'
2022-11-21T18:18:13,072   adding license file 'LICENSE.txt'
2022-11-21T18:18:13,077   writing manifest file '/tmp/pip-pip-egg-info-l1lp4i0v/pyreference.egg-info/SOURCES.txt'
2022-11-21T18:18:13,235   Preparing metadata (setup.py): finished with status 'done'
2022-11-21T18:18:13,249   Source in /tmp/pip-wheel-x7wu5_lf/pyreference_860962ca355849dba8a3907763ca8c4b has version 0.7.2, which satisfies requirement pyreference==0.7.2 from https://files.pythonhosted.org/packages/1c/08/c06cd2fd7794434e72c3fca420e91d0c05927f3180ebe482850b12ca443a/pyreference-0.7.2.tar.gz
2022-11-21T18:18:13,251   Removed pyreference==0.7.2 from https://files.pythonhosted.org/packages/1c/08/c06cd2fd7794434e72c3fca420e91d0c05927f3180ebe482850b12ca443a/pyreference-0.7.2.tar.gz from build tracker '/tmp/pip-build-tracker-tghg7ljh'
2022-11-21T18:18:13,268 Created temporary directory: /tmp/pip-unpack-r5ce7yp0
2022-11-21T18:18:13,269 Building wheels for collected packages: pyreference
2022-11-21T18:18:13,278   Created temporary directory: /tmp/pip-wheel-7am3j0ii
2022-11-21T18:18:13,279   Building wheel for pyreference (setup.py): started
2022-11-21T18:18:13,282   Destination directory: /tmp/pip-wheel-7am3j0ii
2022-11-21T18:18:13,282   Running command python setup.py bdist_wheel
2022-11-21T18:18:15,631   running bdist_wheel
2022-11-21T18:18:16,333   running build
2022-11-21T18:18:16,334   running build_py
2022-11-21T18:18:16,447   creating build
2022-11-21T18:18:16,448   creating build/lib
2022-11-21T18:18:16,449   creating build/lib/tests
2022-11-21T18:18:16,451   copying tests/__init__.py -> build/lib/tests
2022-11-21T18:18:16,455   copying tests/test_reference.py -> build/lib/tests
2022-11-21T18:18:16,461   creating build/lib/pyreference
2022-11-21T18:18:16,462   copying pyreference/__init__.py -> build/lib/pyreference
2022-11-21T18:18:16,465   copying pyreference/mirna.py -> build/lib/pyreference
2022-11-21T18:18:16,469   copying pyreference/reference.py -> build/lib/pyreference
2022-11-21T18:18:16,473   copying pyreference/referenceargparse.py -> build/lib/pyreference
2022-11-21T18:18:16,477   copying pyreference/genomic_region.py -> build/lib/pyreference
2022-11-21T18:18:16,480   copying pyreference/transcript.py -> build/lib/pyreference
2022-11-21T18:18:16,485   copying pyreference/settings.py -> build/lib/pyreference
2022-11-21T18:18:16,488   copying pyreference/gene.py -> build/lib/pyreference
2022-11-21T18:18:16,491   copying pyreference/pyreference_config.py -> build/lib/pyreference
2022-11-21T18:18:16,496   creating build/lib/pyreference/utils
2022-11-21T18:18:16,498   copying pyreference/utils/genomics_utils.py -> build/lib/pyreference/utils
2022-11-21T18:18:16,501   copying pyreference/utils/__init__.py -> build/lib/pyreference/utils
2022-11-21T18:18:16,504   copying pyreference/utils/iv_iterators.py -> build/lib/pyreference/utils
2022-11-21T18:18:16,507   copying pyreference/utils/file_utils.py -> build/lib/pyreference/utils
2022-11-21T18:18:16,515   running build_scripts
2022-11-21T18:18:16,515   creating build/scripts-3.7
2022-11-21T18:18:16,517   copying and adjusting bin/pyreference_biotype.py -> build/scripts-3.7
2022-11-21T18:18:16,521   changing mode of build/scripts-3.7/pyreference_biotype.py from 644 to 755
2022-11-21T18:18:16,585   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-21T18:18:16,585     setuptools.SetuptoolsDeprecationWarning,
2022-11-21T18:18:16,641   installing to build/bdist.linux-armv7l/wheel
2022-11-21T18:18:16,642   running install
2022-11-21T18:18:16,704   running install_lib
2022-11-21T18:18:16,764   creating build/bdist.linux-armv7l
2022-11-21T18:18:16,764   creating build/bdist.linux-armv7l/wheel
2022-11-21T18:18:16,768   creating build/bdist.linux-armv7l/wheel/tests
2022-11-21T18:18:16,770   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests
2022-11-21T18:18:16,773   copying build/lib/tests/test_reference.py -> build/bdist.linux-armv7l/wheel/tests
2022-11-21T18:18:16,779   creating build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,781   copying build/lib/pyreference/__init__.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,785   copying build/lib/pyreference/mirna.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,788   copying build/lib/pyreference/reference.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,795   creating build/bdist.linux-armv7l/wheel/pyreference/utils
2022-11-21T18:18:16,796   copying build/lib/pyreference/utils/genomics_utils.py -> build/bdist.linux-armv7l/wheel/pyreference/utils
2022-11-21T18:18:16,800   copying build/lib/pyreference/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyreference/utils
2022-11-21T18:18:16,803   copying build/lib/pyreference/utils/iv_iterators.py -> build/bdist.linux-armv7l/wheel/pyreference/utils
2022-11-21T18:18:16,807   copying build/lib/pyreference/utils/file_utils.py -> build/bdist.linux-armv7l/wheel/pyreference/utils
2022-11-21T18:18:16,811   copying build/lib/pyreference/referenceargparse.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,814   copying build/lib/pyreference/genomic_region.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,818   copying build/lib/pyreference/transcript.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,822   copying build/lib/pyreference/settings.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,826   copying build/lib/pyreference/gene.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,829   copying build/lib/pyreference/pyreference_config.py -> build/bdist.linux-armv7l/wheel/pyreference
2022-11-21T18:18:16,832   running install_egg_info
2022-11-21T18:18:17,022   running egg_info
2022-11-21T18:18:17,077   writing pyreference.egg-info/PKG-INFO
2022-11-21T18:18:17,081   writing dependency_links to pyreference.egg-info/dependency_links.txt
2022-11-21T18:18:17,085   writing requirements to pyreference.egg-info/requires.txt
2022-11-21T18:18:17,088   writing top-level names to pyreference.egg-info/top_level.txt
2022-11-21T18:18:17,152   reading manifest file 'pyreference.egg-info/SOURCES.txt'
2022-11-21T18:18:17,156   adding license file 'LICENSE.txt'
2022-11-21T18:18:17,163   writing manifest file 'pyreference.egg-info/SOURCES.txt'
2022-11-21T18:18:17,165   Copying pyreference.egg-info to build/bdist.linux-armv7l/wheel/pyreference-0.7.2-py3.7.egg-info
2022-11-21T18:18:17,186   running install_scripts
2022-11-21T18:18:17,294   creating build/bdist.linux-armv7l/wheel/pyreference-0.7.2.data
2022-11-21T18:18:17,295   creating build/bdist.linux-armv7l/wheel/pyreference-0.7.2.data/scripts
2022-11-21T18:18:17,297   copying build/scripts-3.7/pyreference_biotype.py -> build/bdist.linux-armv7l/wheel/pyreference-0.7.2.data/scripts
2022-11-21T18:18:17,301   changing mode of build/bdist.linux-armv7l/wheel/pyreference-0.7.2.data/scripts/pyreference_biotype.py to 755
2022-11-21T18:18:17,355   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2022-11-21T18:18:17,363   creating build/bdist.linux-armv7l/wheel/pyreference-0.7.2.dist-info/WHEEL
2022-11-21T18:18:17,367   creating '/tmp/pip-wheel-7am3j0ii/pyreference-0.7.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-21T18:18:17,371   adding 'pyreference/__init__.py'
2022-11-21T18:18:17,374   adding 'pyreference/gene.py'
2022-11-21T18:18:17,377   adding 'pyreference/genomic_region.py'
2022-11-21T18:18:17,379   adding 'pyreference/mirna.py'
2022-11-21T18:18:17,381   adding 'pyreference/pyreference_config.py'
2022-11-21T18:18:17,387   adding 'pyreference/reference.py'
2022-11-21T18:18:17,390   adding 'pyreference/referenceargparse.py'
2022-11-21T18:18:17,392   adding 'pyreference/settings.py'
2022-11-21T18:18:17,396   adding 'pyreference/transcript.py'
2022-11-21T18:18:17,399   adding 'pyreference/utils/__init__.py'
2022-11-21T18:18:17,401   adding 'pyreference/utils/file_utils.py'
2022-11-21T18:18:17,404   adding 'pyreference/utils/genomics_utils.py'
2022-11-21T18:18:17,406   adding 'pyreference/utils/iv_iterators.py'
2022-11-21T18:18:17,434   adding 'pyreference-0.7.2.data/scripts/pyreference_biotype.py'
2022-11-21T18:18:17,440   adding 'tests/__init__.py'
2022-11-21T18:18:17,443   adding 'tests/test_reference.py'
2022-11-21T18:18:17,446   adding 'pyreference-0.7.2.dist-info/LICENSE.txt'
2022-11-21T18:18:17,448   adding 'pyreference-0.7.2.dist-info/METADATA'
2022-11-21T18:18:17,450   adding 'pyreference-0.7.2.dist-info/WHEEL'
2022-11-21T18:18:17,451   adding 'pyreference-0.7.2.dist-info/top_level.txt'
2022-11-21T18:18:17,453   adding 'pyreference-0.7.2.dist-info/RECORD'
2022-11-21T18:18:17,456   removing build/bdist.linux-armv7l/wheel
2022-11-21T18:18:17,663   Building wheel for pyreference (setup.py): finished with status 'done'
2022-11-21T18:18:17,671   Created wheel for pyreference: filename=pyreference-0.7.2-py3-none-any.whl size=25001 sha256=63944ee66450fd0d3d1d2425b2271d3112be0b686171ce4bc6c1a6b9ab1bad30
2022-11-21T18:18:17,673   Stored in directory: /tmp/pip-ephem-wheel-cache-qm01k07n/wheels/ad/ab/a9/ac2491f39cbd88526d53e905e31f29833b7dc401db433887b7
2022-11-21T18:18:17,700 Successfully built pyreference
2022-11-21T18:18:17,710 Removed build tracker: '/tmp/pip-build-tracker-tghg7ljh'