2022-11-21T19:47:03,736 Created temporary directory: /tmp/pip-ephem-wheel-cache-wdfmestz 2022-11-21T19:47:03,738 Created temporary directory: /tmp/pip-build-tracker-s00_db7b 2022-11-21T19:47:03,738 Initialized build tracking at /tmp/pip-build-tracker-s00_db7b 2022-11-21T19:47:03,738 Created build tracker: /tmp/pip-build-tracker-s00_db7b 2022-11-21T19:47:03,738 Entered build tracker: /tmp/pip-build-tracker-s00_db7b 2022-11-21T19:47:03,739 Created temporary directory: /tmp/pip-wheel-fb_p33j8 2022-11-21T19:47:03,742 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-21T19:47:03,745 Created temporary directory: /tmp/pip-ephem-wheel-cache-u2g1q699 2022-11-21T19:47:03,768 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-21T19:47:03,771 2 location(s) to search for versions of ukat: 2022-11-21T19:47:03,771 * https://pypi.org/simple/ukat/ 2022-11-21T19:47:03,771 * https://www.piwheels.org/simple/ukat/ 2022-11-21T19:47:03,772 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2022-11-21T19:47:03,772 Getting page https://pypi.org/simple/ukat/ 2022-11-21T19:47:03,774 Found index url https://pypi.org/simple 2022-11-21T19:47:03,826 Fetched page https://pypi.org/simple/ukat/ as application/vnd.pypi.simple.v1+json 2022-11-21T19:47:03,830 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:03,831 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2022-11-21T19:47:03,831 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:03,832 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2022-11-21T19:47:03,832 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:03,833 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2022-11-21T19:47:03,833 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:03,834 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2022-11-21T19:47:03,834 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:03,835 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2022-11-21T19:47:03,835 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-11-21T19:47:03,836 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2022-11-21T19:47:03,836 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-11-21T19:47:03,837 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2022-11-21T19:47:03,837 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:03,838 Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1 2022-11-21T19:47:03,838 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/be/62/a915276e1511bc65a0dc4180ef170962967e6f972c58a57a64e3ad0474e0/ukat-0.6.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:03,839 Found link https://files.pythonhosted.org/packages/ff/2a/19315dfeeebb202d6761e86e70a87752435eefd0b5d642b690629b64f704/ukat-0.6.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.2 2022-11-21T19:47:03,839 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/9c/71/e782f90624fa37a2d6c14a03f8fa69bac8e724c7b0e34b547a4969bc98fb/ukat-0.6.3-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:03,840 Found link https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.3 2022-11-21T19:47:03,840 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/32/1a/f0534c14ceec33bfd8193b3f6b012db9c342757766e8890adf1970f2fd1b/ukat-0.6.4-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:03,841 Found link https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.4 2022-11-21T19:47:03,841 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2022-11-21T19:47:03,841 Getting page https://www.piwheels.org/simple/ukat/ 2022-11-21T19:47:03,842 Found index url https://www.piwheels.org/simple 2022-11-21T19:47:04,006 Fetched page https://www.piwheels.org/simple/ukat/ as text/html 2022-11-21T19:47:04,010 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.3-py3-none-any.whl#sha256=5ddc013291e2d74f3f64a22c888c300cdabbc893b6cf514d4c7bf97df8be14a6 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:04,010 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.2-py3-none-any.whl#sha256=a831cd11993de2b4c1c722e0294a13bb3e6d1da09b5ebe3c300307759d10cf02 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:04,010 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.1-py3-none-any.whl#sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2022-11-21T19:47:04,011 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-11-21T19:47:04,011 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2022-11-21T19:47:04,011 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:04,011 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:04,011 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:04,012 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:04,012 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2022-11-21T19:47:04,012 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2022-11-21T19:47:04,012 Skipping link: not a file: https://pypi.org/simple/ukat/ 2022-11-21T19:47:04,031 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2022-11-21T19:47:04,048 Collecting ukat==0.6.4 2022-11-21T19:47:04,051 Created temporary directory: /tmp/pip-unpack-15mge945 2022-11-21T19:47:04,243 Downloading ukat-0.6.4.tar.gz (71 kB) 2022-11-21T19:47:04,418 Added ukat==0.6.4 from https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz to build tracker '/tmp/pip-build-tracker-s00_db7b' 2022-11-21T19:47:04,420 Running setup.py (path:/tmp/pip-wheel-fb_p33j8/ukat_1fc867f8f1e84a15958e97e00b0f2ed1/setup.py) egg_info for package ukat 2022-11-21T19:47:04,421 Created temporary directory: /tmp/pip-pip-egg-info-o20zgyhe 2022-11-21T19:47:04,421 Preparing metadata (setup.py): started 2022-11-21T19:47:04,422 Running command python setup.py egg_info 2022-11-21T19:47:05,536 running egg_info 2022-11-21T19:47:05,538 creating /tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info 2022-11-21T19:47:05,561 writing /tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/PKG-INFO 2022-11-21T19:47:05,563 writing dependency_links to /tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/dependency_links.txt 2022-11-21T19:47:05,566 writing requirements to /tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/requires.txt 2022-11-21T19:47:05,567 writing top-level names to /tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/top_level.txt 2022-11-21T19:47:05,568 writing manifest file '/tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/SOURCES.txt' 2022-11-21T19:47:05,647 reading manifest file '/tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/SOURCES.txt' 2022-11-21T19:47:05,648 reading manifest template 'MANIFEST.in' 2022-11-21T19:47:05,661 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-11-21T19:47:05,662 no previously-included directories found matching 'doc' 2022-11-21T19:47:05,662 no previously-included directories found matching 'experiments' 2022-11-21T19:47:05,662 adding license file 'LICENSE' 2022-11-21T19:47:05,665 writing manifest file '/tmp/pip-pip-egg-info-o20zgyhe/ukat.egg-info/SOURCES.txt' 2022-11-21T19:47:05,782 Preparing metadata (setup.py): finished with status 'done' 2022-11-21T19:47:05,788 Source in /tmp/pip-wheel-fb_p33j8/ukat_1fc867f8f1e84a15958e97e00b0f2ed1 has version 0.6.4, which satisfies requirement ukat==0.6.4 from https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz 2022-11-21T19:47:05,789 Removed ukat==0.6.4 from https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz from build tracker '/tmp/pip-build-tracker-s00_db7b' 2022-11-21T19:47:05,797 Created temporary directory: /tmp/pip-unpack-ci5res9w 2022-11-21T19:47:05,797 Building wheels for collected packages: ukat 2022-11-21T19:47:05,802 Created temporary directory: /tmp/pip-wheel-zxfatbs0 2022-11-21T19:47:05,803 Building wheel for ukat (setup.py): started 2022-11-21T19:47:05,804 Destination directory: /tmp/pip-wheel-zxfatbs0 2022-11-21T19:47:05,804 Running command python setup.py bdist_wheel 2022-11-21T19:47:07,094 running bdist_wheel 2022-11-21T19:47:07,379 running build 2022-11-21T19:47:07,379 running build_py 2022-11-21T19:47:07,414 creating build 2022-11-21T19:47:07,414 creating build/lib 2022-11-21T19:47:07,416 creating build/lib/ukat 2022-11-21T19:47:07,418 copying ukat/__init__.py -> build/lib/ukat 2022-11-21T19:47:07,420 creating build/lib/ukat/utils 2022-11-21T19:47:07,421 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2022-11-21T19:47:07,423 copying ukat/utils/tools.py -> build/lib/ukat/utils 2022-11-21T19:47:07,645 copying ukat/utils/ge.py -> build/lib/ukat/utils 2022-11-21T19:47:07,647 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2022-11-21T19:47:07,649 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2022-11-21T19:47:07,652 creating build/lib/ukat/segmentation 2022-11-21T19:47:07,652 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2022-11-21T19:47:07,655 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2022-11-21T19:47:07,657 creating build/lib/ukat/qa 2022-11-21T19:47:07,658 copying ukat/qa/snr.py -> build/lib/ukat/qa 2022-11-21T19:47:07,660 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2022-11-21T19:47:07,662 creating build/lib/ukat/vessels 2022-11-21T19:47:07,663 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2022-11-21T19:47:07,665 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2022-11-21T19:47:07,668 creating build/lib/ukat/data 2022-11-21T19:47:07,669 copying ukat/data/fetch.py -> build/lib/ukat/data 2022-11-21T19:47:07,672 copying ukat/data/__init__.py -> build/lib/ukat/data 2022-11-21T19:47:07,674 creating build/lib/ukat/mapping 2022-11-21T19:47:07,675 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,678 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,680 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,682 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,685 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,686 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,688 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2022-11-21T19:47:07,691 creating build/lib/ukat/utils/tests 2022-11-21T19:47:07,692 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2022-11-21T19:47:07,694 copying ukat/utils/tests/test_ge.py -> build/lib/ukat/utils/tests 2022-11-21T19:47:07,696 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2022-11-21T19:47:07,699 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2022-11-21T19:47:07,700 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2022-11-21T19:47:07,703 creating build/lib/ukat/segmentation/tests 2022-11-21T19:47:07,703 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2022-11-21T19:47:07,705 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2022-11-21T19:47:07,708 creating build/lib/ukat/qa/tests 2022-11-21T19:47:07,709 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2022-11-21T19:47:07,711 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2022-11-21T19:47:07,713 creating build/lib/ukat/vessels/tests 2022-11-21T19:47:07,714 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2022-11-21T19:47:07,717 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2022-11-21T19:47:07,719 creating build/lib/ukat/data/tests 2022-11-21T19:47:07,720 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2022-11-21T19:47:07,721 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2022-11-21T19:47:07,725 creating build/lib/ukat/mapping/tests 2022-11-21T19:47:07,725 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,728 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,731 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,733 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,735 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,737 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,739 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2022-11-21T19:47:07,742 running egg_info 2022-11-21T19:47:07,797 writing ukat.egg-info/PKG-INFO 2022-11-21T19:47:07,799 writing dependency_links to ukat.egg-info/dependency_links.txt 2022-11-21T19:47:07,801 writing requirements to ukat.egg-info/requires.txt 2022-11-21T19:47:07,802 writing top-level names to ukat.egg-info/top_level.txt 2022-11-21T19:47:07,833 reading manifest file 'ukat.egg-info/SOURCES.txt' 2022-11-21T19:47:07,836 reading manifest template 'MANIFEST.in' 2022-11-21T19:47:07,860 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2022-11-21T19:47:07,860 no previously-included directories found matching 'doc' 2022-11-21T19:47:07,861 no previously-included directories found matching 'experiments' 2022-11-21T19:47:07,861 adding license file 'LICENSE' 2022-11-21T19:47:07,865 writing manifest file 'ukat.egg-info/SOURCES.txt' 2022-11-21T19:47:07,868 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'ukat.utils.tests.test_data' as data is deprecated, please list it in `packages`. 2022-11-21T19:47:07,868 !! 2022-11-21T19:47:07,868 ############################ 2022-11-21T19:47:07,869 # Package would be ignored # 2022-11-21T19:47:07,869 ############################ 2022-11-21T19:47:07,869 Python recognizes 'ukat.utils.tests.test_data' as an importable package, 2022-11-21T19:47:07,869 but it is not listed in the `packages` configuration of setuptools. 2022-11-21T19:47:07,869 'ukat.utils.tests.test_data' has been automatically added to the distribution only 2022-11-21T19:47:07,869 because it may contain data files, but this behavior is likely to change 2022-11-21T19:47:07,870 in future versions of setuptools (and therefore is considered deprecated). 2022-11-21T19:47:07,870 Please make sure that 'ukat.utils.tests.test_data' is included as a package by using 2022-11-21T19:47:07,870 the `packages` configuration field or the proper discovery methods 2022-11-21T19:47:07,870 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-21T19:47:07,870 instead of `find_packages(...)`/`find:`). 2022-11-21T19:47:07,871 You can read more about "package discovery" and "data files" on setuptools 2022-11-21T19:47:07,871 documentation page. 2022-11-21T19:47:07,871 !! 2022-11-21T19:47:07,872 check.warn(importable) 2022-11-21T19:47:07,872 creating build/lib/ukat/utils/tests/test_data 2022-11-21T19:47:07,872 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2022-11-21T19:47:07,873 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2022-11-21T19:47:07,875 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2022-11-21T19:47:07,909 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-21T19:47:07,910 warnings.warn( 2022-11-21T19:47:07,934 installing to build/bdist.linux-armv7l/wheel 2022-11-21T19:47:07,934 running install 2022-11-21T19:47:07,959 running install_lib 2022-11-21T19:47:07,987 creating build/bdist.linux-armv7l 2022-11-21T19:47:07,988 creating build/bdist.linux-armv7l/wheel 2022-11-21T19:47:07,989 creating build/bdist.linux-armv7l/wheel/ukat 2022-11-21T19:47:07,990 creating build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:07,991 copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:07,994 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:07,995 copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:07,998 copying build/lib/ukat/utils/tests/test_ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:07,999 copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:08,002 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-11-21T19:47:08,003 copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-11-21T19:47:08,005 copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-11-21T19:47:08,007 copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2022-11-21T19:47:08,009 copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:08,011 copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2022-11-21T19:47:08,013 copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:08,015 copying build/lib/ukat/utils/ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:08,017 copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:08,019 copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2022-11-21T19:47:08,022 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-11-21T19:47:08,023 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-11-21T19:47:08,024 copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-11-21T19:47:08,026 copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2022-11-21T19:47:08,028 copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-11-21T19:47:08,030 copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2022-11-21T19:47:08,032 creating build/bdist.linux-armv7l/wheel/ukat/qa 2022-11-21T19:47:08,034 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-11-21T19:47:08,034 copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-11-21T19:47:08,037 copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2022-11-21T19:47:08,039 copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-11-21T19:47:08,042 copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2022-11-21T19:47:08,044 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2022-11-21T19:47:08,045 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-11-21T19:47:08,046 copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-11-21T19:47:08,048 copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2022-11-21T19:47:08,050 copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-11-21T19:47:08,052 copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2022-11-21T19:47:08,055 copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat 2022-11-21T19:47:08,057 creating build/bdist.linux-armv7l/wheel/ukat/data 2022-11-21T19:47:08,058 copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-11-21T19:47:08,061 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-11-21T19:47:08,062 copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-11-21T19:47:08,064 copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2022-11-21T19:47:08,067 copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data 2022-11-21T19:47:08,069 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,069 copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,072 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,073 copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,076 copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,079 copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,081 copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,083 copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,086 copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,088 copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2022-11-21T19:47:08,090 copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,093 copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,095 copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,098 copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,099 copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,102 copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2022-11-21T19:47:08,104 running install_egg_info 2022-11-21T19:47:08,132 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.6.4-py3.9.egg-info 2022-11-21T19:47:08,143 running install_scripts 2022-11-21T19:47:08,229 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-21T19:47:08,234 creating build/bdist.linux-armv7l/wheel/ukat-0.6.4.dist-info/WHEEL 2022-11-21T19:47:08,236 creating '/tmp/pip-wheel-zxfatbs0/ukat-0.6.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-21T19:47:08,239 adding 'ukat/__init__.py' 2022-11-21T19:47:08,240 adding 'ukat/data/__init__.py' 2022-11-21T19:47:08,244 adding 'ukat/data/fetch.py' 2022-11-21T19:47:08,246 adding 'ukat/data/tests/__init__.py' 2022-11-21T19:47:08,247 adding 'ukat/data/tests/test_fetch.py' 2022-11-21T19:47:08,249 adding 'ukat/mapping/__init__.py' 2022-11-21T19:47:08,251 adding 'ukat/mapping/b0.py' 2022-11-21T19:47:08,253 adding 'ukat/mapping/diffusion.py' 2022-11-21T19:47:08,254 adding 'ukat/mapping/mtr.py' 2022-11-21T19:47:08,257 adding 'ukat/mapping/t1.py' 2022-11-21T19:47:08,259 adding 'ukat/mapping/t2.py' 2022-11-21T19:47:08,261 adding 'ukat/mapping/t2star.py' 2022-11-21T19:47:08,263 adding 'ukat/mapping/tests/__init__.py' 2022-11-21T19:47:08,265 adding 'ukat/mapping/tests/test_b0.py' 2022-11-21T19:47:08,266 adding 'ukat/mapping/tests/test_diffusion.py' 2022-11-21T19:47:08,268 adding 'ukat/mapping/tests/test_mtr.py' 2022-11-21T19:47:08,270 adding 'ukat/mapping/tests/test_t1.py' 2022-11-21T19:47:08,272 adding 'ukat/mapping/tests/test_t2.py' 2022-11-21T19:47:08,273 adding 'ukat/mapping/tests/test_t2star.py' 2022-11-21T19:47:08,275 adding 'ukat/qa/__init__.py' 2022-11-21T19:47:08,277 adding 'ukat/qa/snr.py' 2022-11-21T19:47:08,279 adding 'ukat/qa/tests/__init__.py' 2022-11-21T19:47:08,281 adding 'ukat/qa/tests/test_snr.py' 2022-11-21T19:47:08,282 adding 'ukat/segmentation/__init__.py' 2022-11-21T19:47:08,284 adding 'ukat/segmentation/whole_kidney.py' 2022-11-21T19:47:08,286 adding 'ukat/segmentation/tests/__init__.py' 2022-11-21T19:47:08,287 adding 'ukat/segmentation/tests/test_whole_kidney.py' 2022-11-21T19:47:08,289 adding 'ukat/utils/__init__.py' 2022-11-21T19:47:08,291 adding 'ukat/utils/arraystats.py' 2022-11-21T19:47:08,292 adding 'ukat/utils/ge.py' 2022-11-21T19:47:08,293 adding 'ukat/utils/siemens.py' 2022-11-21T19:47:08,295 adding 'ukat/utils/tools.py' 2022-11-21T19:47:08,296 adding 'ukat/utils/tests/__init__.py' 2022-11-21T19:47:08,298 adding 'ukat/utils/tests/test_arraystats.py' 2022-11-21T19:47:08,300 adding 'ukat/utils/tests/test_ge.py' 2022-11-21T19:47:08,301 adding 'ukat/utils/tests/test_siemens.py' 2022-11-21T19:47:08,303 adding 'ukat/utils/tests/test_tools.py' 2022-11-21T19:47:08,305 adding 'ukat/utils/tests/test_data/diffusion_scheme.txt' 2022-11-21T19:47:08,306 adding 'ukat/utils/tests/test_data/expected_from_str.dvs' 2022-11-21T19:47:08,307 adding 'ukat/utils/tests/test_data/expected_from_txt.dvs' 2022-11-21T19:47:08,309 adding 'ukat/vessels/__init__.py' 2022-11-21T19:47:08,310 adding 'ukat/vessels/phase_contrast.py' 2022-11-21T19:47:08,312 adding 'ukat/vessels/tests/__init__.py' 2022-11-21T19:47:08,314 adding 'ukat/vessels/tests/test_phase_contrast.py' 2022-11-21T19:47:08,321 adding 'ukat-0.6.4.dist-info/LICENSE' 2022-11-21T19:47:08,323 adding 'ukat-0.6.4.dist-info/METADATA' 2022-11-21T19:47:08,324 adding 'ukat-0.6.4.dist-info/WHEEL' 2022-11-21T19:47:08,325 adding 'ukat-0.6.4.dist-info/top_level.txt' 2022-11-21T19:47:08,326 adding 'ukat-0.6.4.dist-info/RECORD' 2022-11-21T19:47:08,329 removing build/bdist.linux-armv7l/wheel 2022-11-21T19:47:08,492 Building wheel for ukat (setup.py): finished with status 'done' 2022-11-21T19:47:08,496 Created wheel for ukat: filename=ukat-0.6.4-py3-none-any.whl size=89004 sha256=5009f9a41fa9e635b2b381e49387fbc0ebee0d9222ac9cb78f9e6ebeff8fc226 2022-11-21T19:47:08,497 Stored in directory: /tmp/pip-ephem-wheel-cache-u2g1q699/wheels/8f/27/bf/9431d4debc87f0e128cc01b177437ac1312ea3e27f5388dcc2 2022-11-21T19:47:08,512 Successfully built ukat 2022-11-21T19:47:08,518 Removed build tracker: '/tmp/pip-build-tracker-s00_db7b'