2022-11-21T20:58:56,514 Created temporary directory: /tmp/pip-ephem-wheel-cache-xsr6hfww 2022-11-21T20:58:56,519 Created temporary directory: /tmp/pip-build-tracker-as0nflq7 2022-11-21T20:58:56,519 Initialized build tracking at /tmp/pip-build-tracker-as0nflq7 2022-11-21T20:58:56,520 Created build tracker: /tmp/pip-build-tracker-as0nflq7 2022-11-21T20:58:56,520 Entered build tracker: /tmp/pip-build-tracker-as0nflq7 2022-11-21T20:58:56,521 Created temporary directory: /tmp/pip-wheel-3um1a38w 2022-11-21T20:58:56,529 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-21T20:58:56,534 Created temporary directory: /tmp/pip-ephem-wheel-cache-0ok2y8ab 2022-11-21T20:58:56,586 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-21T20:58:56,593 2 location(s) to search for versions of hgvs: 2022-11-21T20:58:56,593 * https://pypi.org/simple/hgvs/ 2022-11-21T20:58:56,593 * https://www.piwheels.org/simple/hgvs/ 2022-11-21T20:58:56,594 Fetching project page and analyzing links: https://pypi.org/simple/hgvs/ 2022-11-21T20:58:56,595 Getting page https://pypi.org/simple/hgvs/ 2022-11-21T20:58:56,599 Found index url https://pypi.org/simple 2022-11-21T20:58:56,714 Fetched page https://pypi.org/simple/hgvs/ as application/vnd.pypi.simple.v1+json 2022-11-21T20:58:56,807 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/23/c7/8f5bd2208bf3f7d48310cfec4489bf54a3b11d04b67221b7abafcf6b2424/hgvs-0.1.1-py2.7.egg (from 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2022-11-21T20:58:56,922 Skipping link: No binaries permitted for hgvs: https://files.pythonhosted.org/packages/c8/b7/8950a1ce90093f2f1342cb745d50028553a587f6d0973e1e7a97e364b348/hgvs-1.5.4-py2.py3-none-any.whl (from https://pypi.org/simple/hgvs/) (requires-python:>=3.6) 2022-11-21T20:58:56,923 Found link https://files.pythonhosted.org/packages/f9/35/15d86f2e862a697626fdfc7c91d6ccf862bdbb7a7c595b428bf9dddb6c3c/hgvs-1.5.4.tar.gz (from https://pypi.org/simple/hgvs/) (requires-python:>=3.6), version: 1.5.4 2022-11-21T20:58:56,924 Fetching project page and analyzing links: https://www.piwheels.org/simple/hgvs/ 2022-11-21T20:58:56,924 Getting page https://www.piwheels.org/simple/hgvs/ 2022-11-21T20:58:56,927 Found index url https://www.piwheels.org/simple 2022-11-21T20:58:57,167 Fetched page https://www.piwheels.org/simple/hgvs/ as text/html 2022-11-21T20:58:57,216 Skipping link: No binaries permitted for hgvs: 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https://www.piwheels.org/simple/hgvs/hgvs-0.3.2-py3-none-any.whl#sha256=a3569a368b852c93421023e928e7e22e7c55980af51ff41511e29937531240e0 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,246 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.3.1-py3-none-any.whl#sha256=44f24070e3b69372411fa74e0bb8269666a6cbbcd5bbd65c3f3cee3b0374b977 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,247 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.3-py3-none-any.whl#sha256=dbf16c9c2c4b57c89167960d72049146c753ef8fcf67cfd8e591ee14d5f623d5 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,247 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.2.2-py3-none-any.whl#sha256=2ab91fda0a12b7933bbb52b2539b5123b1709a6c307442f664a9d5eece24f6e0 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,248 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.2.1-py3-none-any.whl#sha256=8b39ac767ff608182f0a7ed292d432d67e5c9dfd8bf0f9c08c0b4648672c5021 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,248 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.2-py3-none-any.whl#sha256=11ecb9ab4a0fb1a67f48d53c46fbaf8d1a4a729c04d28b32aec18ebdb9a80882 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,249 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.11-py3-none-any.whl#sha256=9dbb1965ef4df885e5922c70a92eac5bd06efb16f8c898edff536a7eeed783fd (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,249 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.10-py3-none-any.whl#sha256=5573bb5b4dcc15b22a5c83a34ef64b5077a4a068c8c930c07ce6a75c1eae4ad0 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,250 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.9-py3-none-any.whl#sha256=141bd0f0e2e968e7693c4af02027644a97ecdbbf5fe9338e21dc1a13345ab39d (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,250 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.7-py3-none-any.whl#sha256=f5dfe89853412d0698c206e28d439335416246f13fb6a12ad2bf20d9fbf756e7 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,251 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.6-py3-none-any.whl#sha256=ebdd2fc91be94fe6e198bacabb86b17faee3b197f5fb6b7e92bf2dde25ff8a37 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,251 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.5-py3-none-any.whl#sha256=a60a2084ee7a4b3380b5cb31bd65d2c1383eac801899d68a77c566f0faf73de3 (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,252 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.2-py3-none-any.whl#sha256=0b15923c2c866a4ecec700301ac346f67f978fc49732bc54700375ae50054c4c (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,252 Skipping link: No binaries permitted for hgvs: https://www.piwheels.org/simple/hgvs/hgvs-0.1.1-py3-none-any.whl#sha256=6dd6f6a4e7ee4b506b33102830a9aeb7fb7576a1fbd104b059074d804af885ed (from https://www.piwheels.org/simple/hgvs/) 2022-11-21T20:58:57,253 Skipping link: not a file: https://www.piwheels.org/simple/hgvs/ 2022-11-21T20:58:57,254 Skipping link: not a file: https://pypi.org/simple/hgvs/ 2022-11-21T20:58:57,309 Given no hashes to check 1 links for project 'hgvs': discarding no candidates 2022-11-21T20:58:57,340 Collecting hgvs==1.5.4 2022-11-21T20:58:57,345 Created temporary directory: /tmp/pip-unpack-gr1zq2qq 2022-11-21T20:58:57,781 Downloading hgvs-1.5.4.tar.gz (2.2 MB) 2022-11-21T20:59:00,654 Added hgvs==1.5.4 from https://files.pythonhosted.org/packages/f9/35/15d86f2e862a697626fdfc7c91d6ccf862bdbb7a7c595b428bf9dddb6c3c/hgvs-1.5.4.tar.gz to build tracker '/tmp/pip-build-tracker-as0nflq7' 2022-11-21T20:59:00,670 Created temporary directory: /tmp/pip-build-env-q6yo4sgr 2022-11-21T20:59:00,682 Installing build dependencies: started 2022-11-21T20:59:00,684 Running command pip subprocess to install build dependencies 2022-11-21T20:59:03,334 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-11-21T20:59:04,089 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-21T20:59:04,143 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-21T20:59:07,819 Collecting setuptools>=65.3 2022-11-21T20:59:08,091 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-21T20:59:09,036 Collecting setuptools_scm[toml]~=7.0 2022-11-21T20:59:09,072 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-11-21T20:59:09,375 Collecting typing-extensions 2022-11-21T20:59:09,408 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-11-21T20:59:09,798 Collecting packaging>=20.0 2022-11-21T20:59:09,831 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-21T20:59:10,739 Collecting importlib-metadata 2022-11-21T20:59:10,772 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-5.0.0-py3-none-any.whl (21 kB) 2022-11-21T20:59:11,030 Collecting tomli>=1.0.0 2022-11-21T20:59:11,063 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-11-21T20:59:12,494 Collecting pyparsing!=3.0.5,>=2.0.2 2022-11-21T20:59:12,542 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-11-21T20:59:13,180 Collecting zipp>=0.5 2022-11-21T20:59:13,212 Using cached https://www.piwheels.org/simple/zipp/zipp-3.10.0-py3-none-any.whl (6.2 kB) 2022-11-21T20:59:18,797 Installing collected packages: zipp, typing-extensions, tomli, setuptools, pyparsing, packaging, importlib-metadata, setuptools_scm 2022-11-21T20:59:25,109 Successfully installed importlib-metadata-5.0.0 packaging-21.3 pyparsing-3.0.9 setuptools-65.6.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 zipp-3.10.0 2022-11-21T20:59:25,141 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-21T20:59:25,142 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-21T20:59:25,635 Installing build dependencies: finished with status 'done' 2022-11-21T20:59:25,646 Getting requirements to build wheel: started 2022-11-21T20:59:25,648 Running command Getting requirements to build wheel 2022-11-21T20:59:28,724 running egg_info 2022-11-21T20:59:28,740 writing src/hgvs.egg-info/PKG-INFO 2022-11-21T20:59:28,746 writing dependency_links to src/hgvs.egg-info/dependency_links.txt 2022-11-21T20:59:28,750 writing entry points to src/hgvs.egg-info/entry_points.txt 2022-11-21T20:59:28,754 writing requirements to src/hgvs.egg-info/requires.txt 2022-11-21T20:59:28,756 writing top-level names to src/hgvs.egg-info/top_level.txt 2022-11-21T20:59:28,856 listing git files failed - pretending there aren't any 2022-11-21T20:59:28,877 reading manifest file 'src/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:29,007 adding license file 'LICENSE.txt' 2022-11-21T20:59:29,008 adding license file 'AUTHORS' 2022-11-21T20:59:29,055 writing manifest file 'src/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:29,362 Getting requirements to build wheel: finished with status 'done' 2022-11-21T20:59:29,406 Installing backend dependencies: started 2022-11-21T20:59:29,409 Running command pip subprocess to install backend dependencies 2022-11-21T20:59:32,234 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-11-21T20:59:33,006 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-21T20:59:33,065 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-21T20:59:33,912 Collecting wheel 2022-11-21T20:59:33,949 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-11-21T20:59:38,103 Installing collected packages: wheel 2022-11-21T20:59:38,390 Creating /tmp/pip-build-env-q6yo4sgr/normal/bin 2022-11-21T20:59:38,396 changing mode of /tmp/pip-build-env-q6yo4sgr/normal/bin/wheel to 755 2022-11-21T20:59:38,423 Successfully installed wheel-0.38.4 2022-11-21T20:59:38,453 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-21T20:59:38,453 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-21T20:59:38,809 Installing backend dependencies: finished with status 'done' 2022-11-21T20:59:38,814 Created temporary directory: /tmp/pip-modern-metadata-dxekavf5 2022-11-21T20:59:38,821 Preparing metadata (pyproject.toml): started 2022-11-21T20:59:38,823 Running command Preparing metadata (pyproject.toml) 2022-11-21T20:59:41,816 running dist_info 2022-11-21T20:59:41,835 creating /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info 2022-11-21T20:59:41,848 writing /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/PKG-INFO 2022-11-21T20:59:41,856 writing dependency_links to /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/dependency_links.txt 2022-11-21T20:59:41,861 writing entry points to /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/entry_points.txt 2022-11-21T20:59:41,864 writing requirements to /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/requires.txt 2022-11-21T20:59:41,867 writing top-level names to /tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/top_level.txt 2022-11-21T20:59:41,870 writing manifest file '/tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:41,984 listing git files failed - pretending there aren't any 2022-11-21T20:59:42,005 reading manifest file '/tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:42,016 adding license file 'LICENSE.txt' 2022-11-21T20:59:42,016 adding license file 'AUTHORS' 2022-11-21T20:59:42,025 writing manifest file '/tmp/pip-modern-metadata-dxekavf5/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:42,028 creating '/tmp/pip-modern-metadata-dxekavf5/hgvs-1.5.4.dist-info' 2022-11-21T20:59:42,509 Preparing metadata (pyproject.toml): finished with status 'done' 2022-11-21T20:59:42,530 Source in /tmp/pip-wheel-3um1a38w/hgvs_3e5012219fa840d88e966a61d3871129 has version 1.5.4, which satisfies requirement hgvs==1.5.4 from https://files.pythonhosted.org/packages/f9/35/15d86f2e862a697626fdfc7c91d6ccf862bdbb7a7c595b428bf9dddb6c3c/hgvs-1.5.4.tar.gz 2022-11-21T20:59:42,532 Removed hgvs==1.5.4 from https://files.pythonhosted.org/packages/f9/35/15d86f2e862a697626fdfc7c91d6ccf862bdbb7a7c595b428bf9dddb6c3c/hgvs-1.5.4.tar.gz from build tracker '/tmp/pip-build-tracker-as0nflq7' 2022-11-21T20:59:42,552 Created temporary directory: /tmp/pip-unpack-e4rhu7i_ 2022-11-21T20:59:42,554 Building wheels for collected packages: hgvs 2022-11-21T20:59:42,563 Created temporary directory: /tmp/pip-wheel-sc5ex2r4 2022-11-21T20:59:42,564 Destination directory: /tmp/pip-wheel-sc5ex2r4 2022-11-21T20:59:42,569 Building wheel for hgvs (pyproject.toml): started 2022-11-21T20:59:42,571 Running command Building wheel for hgvs (pyproject.toml) 2022-11-21T20:59:45,394 running bdist_wheel 2022-11-21T20:59:45,443 running build 2022-11-21T20:59:45,443 running build_py 2022-11-21T20:59:45,460 creating build 2022-11-21T20:59:45,461 creating build/lib 2022-11-21T20:59:45,463 creating build/lib/hgvs 2022-11-21T20:59:45,465 copying src/hgvs/__init__.py -> build/lib/hgvs 2022-11-21T20:59:45,470 copying src/hgvs/edit.py -> build/lib/hgvs 2022-11-21T20:59:45,475 copying src/hgvs/alignmentmapper.py -> build/lib/hgvs 2022-11-21T20:59:45,479 copying src/hgvs/projector.py -> build/lib/hgvs 2022-11-21T20:59:45,483 copying src/hgvs/assemblymapper.py -> build/lib/hgvs 2022-11-21T20:59:45,488 copying src/hgvs/shell.py -> build/lib/hgvs 2022-11-21T20:59:45,492 copying src/hgvs/validator.py -> build/lib/hgvs 2022-11-21T20:59:45,496 copying src/hgvs/easy.py -> build/lib/hgvs 2022-11-21T20:59:45,500 copying src/hgvs/intervalmapper.py -> build/lib/hgvs 2022-11-21T20:59:45,505 copying src/hgvs/enums.py -> build/lib/hgvs 2022-11-21T20:59:45,508 copying src/hgvs/location.py -> build/lib/hgvs 2022-11-21T20:59:45,513 copying src/hgvs/parser.py -> build/lib/hgvs 2022-11-21T20:59:45,518 copying src/hgvs/posedit.py -> build/lib/hgvs 2022-11-21T20:59:45,522 copying src/hgvs/exceptions.py -> build/lib/hgvs 2022-11-21T20:59:45,526 copying src/hgvs/variantmapper.py -> build/lib/hgvs 2022-11-21T20:59:45,532 copying src/hgvs/config.py -> build/lib/hgvs 2022-11-21T20:59:45,536 copying src/hgvs/hgvsposition.py -> build/lib/hgvs 2022-11-21T20:59:45,539 copying src/hgvs/transcriptmapper.py -> build/lib/hgvs 2022-11-21T20:59:45,545 copying src/hgvs/sequencevariant.py -> build/lib/hgvs 2022-11-21T20:59:45,548 copying src/hgvs/normalizer.py -> build/lib/hgvs 2022-11-21T20:59:45,556 creating build/lib/hgvs/dataproviders 2022-11-21T20:59:45,558 copying src/hgvs/dataproviders/__init__.py -> build/lib/hgvs/dataproviders 2022-11-21T20:59:45,561 copying src/hgvs/dataproviders/seqfetcher.py -> build/lib/hgvs/dataproviders 2022-11-21T20:59:45,564 copying src/hgvs/dataproviders/ncbi.py -> build/lib/hgvs/dataproviders 2022-11-21T20:59:45,569 copying src/hgvs/dataproviders/uta.py -> build/lib/hgvs/dataproviders 2022-11-21T20:59:45,574 copying src/hgvs/dataproviders/interface.py -> build/lib/hgvs/dataproviders 2022-11-21T20:59:45,579 creating build/lib/hgvs/extras 2022-11-21T20:59:45,581 copying src/hgvs/extras/__init__.py -> build/lib/hgvs/extras 2022-11-21T20:59:45,584 copying src/hgvs/extras/babelfish.py -> build/lib/hgvs/extras 2022-11-21T20:59:45,590 creating build/lib/hgvs/utils 2022-11-21T20:59:45,592 copying src/hgvs/utils/__init__.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,595 copying src/hgvs/utils/reftranscriptdata.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,599 copying src/hgvs/utils/validation.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,602 copying src/hgvs/utils/cigarmapper.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,606 copying src/hgvs/utils/altseqbuilder.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,611 copying src/hgvs/utils/orderedenum.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,614 copying src/hgvs/utils/context.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,618 copying src/hgvs/utils/norm.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,623 copying src/hgvs/utils/PersistentDict.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,626 copying src/hgvs/utils/altseq_to_hgvsp.py -> build/lib/hgvs/utils 2022-11-21T20:59:45,632 creating build/lib/hgvs/decorators 2022-11-21T20:59:45,634 copying src/hgvs/decorators/__init__.py -> build/lib/hgvs/decorators 2022-11-21T20:59:45,637 copying src/hgvs/decorators/lru_cache.py -> build/lib/hgvs/decorators 2022-11-21T20:59:45,642 copying src/hgvs/decorators/deprecated.py -> build/lib/hgvs/decorators 2022-11-21T20:59:45,645 running egg_info 2022-11-21T20:59:45,674 writing src/hgvs.egg-info/PKG-INFO 2022-11-21T20:59:45,680 writing dependency_links to src/hgvs.egg-info/dependency_links.txt 2022-11-21T20:59:45,684 writing entry points to src/hgvs.egg-info/entry_points.txt 2022-11-21T20:59:45,687 writing requirements to src/hgvs.egg-info/requires.txt 2022-11-21T20:59:45,689 writing top-level names to src/hgvs.egg-info/top_level.txt 2022-11-21T20:59:45,761 listing git files failed - pretending there aren't any 2022-11-21T20:59:45,782 reading manifest file 'src/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:45,922 adding license file 'LICENSE.txt' 2022-11-21T20:59:45,922 adding license file 'AUTHORS' 2022-11-21T20:59:45,966 writing manifest file 'src/hgvs.egg-info/SOURCES.txt' 2022-11-21T20:59:46,012 creating build/lib/hgvs/_data 2022-11-21T20:59:46,014 copying src/hgvs/_data/defaults.ini -> build/lib/hgvs/_data 2022-11-21T20:59:46,019 copying src/hgvs/_data/invitae.pymeta -> build/lib/hgvs/_data 2022-11-21T20:59:46,023 copying src/hgvs/_data/hgvs.pymeta -> build/lib/hgvs/_data 2022-11-21T20:59:46,067 installing to build/bdist.linux-armv7l/wheel 2022-11-21T20:59:46,067 running install 2022-11-21T20:59:46,129 running install_lib 2022-11-21T20:59:46,144 creating build/bdist.linux-armv7l 2022-11-21T20:59:46,145 creating build/bdist.linux-armv7l/wheel 2022-11-21T20:59:46,149 creating build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,152 creating build/bdist.linux-armv7l/wheel/hgvs/_data 2022-11-21T20:59:46,154 copying build/lib/hgvs/_data/defaults.ini -> build/bdist.linux-armv7l/wheel/hgvs/_data 2022-11-21T20:59:46,158 copying build/lib/hgvs/_data/invitae.pymeta -> build/bdist.linux-armv7l/wheel/hgvs/_data 2022-11-21T20:59:46,162 copying build/lib/hgvs/_data/hgvs.pymeta -> build/bdist.linux-armv7l/wheel/hgvs/_data 2022-11-21T20:59:46,167 copying build/lib/hgvs/__init__.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,171 copying build/lib/hgvs/edit.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,177 copying build/lib/hgvs/alignmentmapper.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,181 copying build/lib/hgvs/projector.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,186 creating build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,188 copying build/lib/hgvs/dataproviders/__init__.py -> build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,192 copying build/lib/hgvs/dataproviders/seqfetcher.py -> build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,196 copying build/lib/hgvs/dataproviders/ncbi.py -> build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,201 copying build/lib/hgvs/dataproviders/uta.py -> build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,206 copying build/lib/hgvs/dataproviders/interface.py -> build/bdist.linux-armv7l/wheel/hgvs/dataproviders 2022-11-21T20:59:46,211 copying build/lib/hgvs/assemblymapper.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,215 copying build/lib/hgvs/shell.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,221 copying build/lib/hgvs/validator.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,226 copying build/lib/hgvs/easy.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,230 copying build/lib/hgvs/intervalmapper.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,235 copying build/lib/hgvs/enums.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,239 creating build/bdist.linux-armv7l/wheel/hgvs/extras 2022-11-21T20:59:46,241 copying build/lib/hgvs/extras/__init__.py -> build/bdist.linux-armv7l/wheel/hgvs/extras 2022-11-21T20:59:46,244 copying build/lib/hgvs/extras/babelfish.py -> build/bdist.linux-armv7l/wheel/hgvs/extras 2022-11-21T20:59:46,248 copying build/lib/hgvs/location.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,253 copying build/lib/hgvs/parser.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,257 copying build/lib/hgvs/posedit.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,263 creating build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,265 copying build/lib/hgvs/utils/__init__.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,269 copying build/lib/hgvs/utils/reftranscriptdata.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,272 copying build/lib/hgvs/utils/validation.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,276 copying build/lib/hgvs/utils/cigarmapper.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,280 copying build/lib/hgvs/utils/altseqbuilder.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,285 copying build/lib/hgvs/utils/orderedenum.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,289 copying build/lib/hgvs/utils/context.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,293 copying build/lib/hgvs/utils/norm.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,297 copying build/lib/hgvs/utils/PersistentDict.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,301 copying build/lib/hgvs/utils/altseq_to_hgvsp.py -> build/bdist.linux-armv7l/wheel/hgvs/utils 2022-11-21T20:59:46,306 copying build/lib/hgvs/exceptions.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,309 copying build/lib/hgvs/variantmapper.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,315 copying build/lib/hgvs/config.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,319 copying build/lib/hgvs/hgvsposition.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,324 creating build/bdist.linux-armv7l/wheel/hgvs/decorators 2022-11-21T20:59:46,326 copying build/lib/hgvs/decorators/__init__.py -> build/bdist.linux-armv7l/wheel/hgvs/decorators 2022-11-21T20:59:46,330 copying build/lib/hgvs/decorators/lru_cache.py -> build/bdist.linux-armv7l/wheel/hgvs/decorators 2022-11-21T20:59:46,334 copying build/lib/hgvs/decorators/deprecated.py -> build/bdist.linux-armv7l/wheel/hgvs/decorators 2022-11-21T20:59:46,338 copying build/lib/hgvs/transcriptmapper.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,343 copying build/lib/hgvs/sequencevariant.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,346 copying build/lib/hgvs/normalizer.py -> build/bdist.linux-armv7l/wheel/hgvs 2022-11-21T20:59:46,351 running install_egg_info 2022-11-21T20:59:46,370 Copying src/hgvs.egg-info to build/bdist.linux-armv7l/wheel/hgvs-1.5.4-py3.7.egg-info 2022-11-21T20:59:46,400 running install_scripts 2022-11-21T20:59:46,522 creating build/bdist.linux-armv7l/wheel/hgvs-1.5.4.dist-info/WHEEL 2022-11-21T20:59:46,529 creating '/tmp/pip-wheel-sc5ex2r4/tmptflkryxe/hgvs-1.5.4-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-21T20:59:46,536 adding 'hgvs/__init__.py' 2022-11-21T20:59:46,543 adding 'hgvs/alignmentmapper.py' 2022-11-21T20:59:46,547 adding 'hgvs/assemblymapper.py' 2022-11-21T20:59:46,550 adding 'hgvs/config.py' 2022-11-21T20:59:46,553 adding 'hgvs/easy.py' 2022-11-21T20:59:46,558 adding 'hgvs/edit.py' 2022-11-21T20:59:46,561 adding 'hgvs/enums.py' 2022-11-21T20:59:46,564 adding 'hgvs/exceptions.py' 2022-11-21T20:59:46,567 adding 'hgvs/hgvsposition.py' 2022-11-21T20:59:46,571 adding 'hgvs/intervalmapper.py' 2022-11-21T20:59:46,576 adding 'hgvs/location.py' 2022-11-21T20:59:46,582 adding 'hgvs/normalizer.py' 2022-11-21T20:59:46,586 adding 'hgvs/parser.py' 2022-11-21T20:59:46,589 adding 'hgvs/posedit.py' 2022-11-21T20:59:46,593 adding 'hgvs/projector.py' 2022-11-21T20:59:46,596 adding 'hgvs/sequencevariant.py' 2022-11-21T20:59:46,599 adding 'hgvs/shell.py' 2022-11-21T20:59:46,604 adding 'hgvs/transcriptmapper.py' 2022-11-21T20:59:46,608 adding 'hgvs/validator.py' 2022-11-21T20:59:46,615 adding 'hgvs/variantmapper.py' 2022-11-21T20:59:46,619 adding 'hgvs/_data/defaults.ini' 2022-11-21T20:59:46,623 adding 'hgvs/_data/hgvs.pymeta' 2022-11-21T20:59:46,626 adding 'hgvs/_data/invitae.pymeta' 2022-11-21T20:59:46,630 adding 'hgvs/dataproviders/__init__.py' 2022-11-21T20:59:46,633 adding 'hgvs/dataproviders/interface.py' 2022-11-21T20:59:46,638 adding 'hgvs/dataproviders/ncbi.py' 2022-11-21T20:59:46,641 adding 'hgvs/dataproviders/seqfetcher.py' 2022-11-21T20:59:46,648 adding 'hgvs/dataproviders/uta.py' 2022-11-21T20:59:46,652 adding 'hgvs/decorators/__init__.py' 2022-11-21T20:59:46,655 adding 'hgvs/decorators/deprecated.py' 2022-11-21T20:59:46,659 adding 'hgvs/decorators/lru_cache.py' 2022-11-21T20:59:46,663 adding 'hgvs/extras/__init__.py' 2022-11-21T20:59:46,665 adding 'hgvs/extras/babelfish.py' 2022-11-21T20:59:46,670 adding 'hgvs/utils/PersistentDict.py' 2022-11-21T20:59:46,672 adding 'hgvs/utils/__init__.py' 2022-11-21T20:59:46,677 adding 'hgvs/utils/altseq_to_hgvsp.py' 2022-11-21T20:59:46,682 adding 'hgvs/utils/altseqbuilder.py' 2022-11-21T20:59:46,686 adding 'hgvs/utils/cigarmapper.py' 2022-11-21T20:59:46,690 adding 'hgvs/utils/context.py' 2022-11-21T20:59:46,693 adding 'hgvs/utils/norm.py' 2022-11-21T20:59:46,696 adding 'hgvs/utils/orderedenum.py' 2022-11-21T20:59:46,698 adding 'hgvs/utils/reftranscriptdata.py' 2022-11-21T20:59:46,701 adding 'hgvs/utils/validation.py' 2022-11-21T20:59:46,707 adding 'hgvs-1.5.4.dist-info/AUTHORS' 2022-11-21T20:59:46,711 adding 'hgvs-1.5.4.dist-info/LICENSE.txt' 2022-11-21T20:59:46,720 adding 'hgvs-1.5.4.dist-info/METADATA' 2022-11-21T20:59:46,723 adding 'hgvs-1.5.4.dist-info/WHEEL' 2022-11-21T20:59:46,725 adding 'hgvs-1.5.4.dist-info/entry_points.txt' 2022-11-21T20:59:46,726 adding 'hgvs-1.5.4.dist-info/top_level.txt' 2022-11-21T20:59:46,728 adding 'hgvs-1.5.4.dist-info/zip-safe' 2022-11-21T20:59:46,731 adding 'hgvs-1.5.4.dist-info/RECORD' 2022-11-21T20:59:46,740 removing build/bdist.linux-armv7l/wheel 2022-11-21T20:59:47,078 Building wheel for hgvs (pyproject.toml): finished with status 'done' 2022-11-21T20:59:47,097 Created wheel for hgvs: filename=hgvs-1.5.4-py2.py3-none-any.whl size=107263 sha256=670676b5507e21ecb9e871584970f54e0a5885dacfe05bca484aef1687d06d7e 2022-11-21T20:59:47,099 Stored in directory: /tmp/pip-ephem-wheel-cache-0ok2y8ab/wheels/91/26/77/770ea46b44121d2147f982608f230841bf632ef4cf8c4f4a7f 2022-11-21T20:59:47,139 Successfully built hgvs 2022-11-21T20:59:47,154 Removed build tracker: '/tmp/pip-build-tracker-as0nflq7'