2022-11-22T17:02:19,134 Created temporary directory: /tmp/pip-ephem-wheel-cache-r_c8eu4w 2022-11-22T17:02:19,136 Created temporary directory: /tmp/pip-build-tracker-vxmpv4y5 2022-11-22T17:02:19,136 Initialized build tracking at /tmp/pip-build-tracker-vxmpv4y5 2022-11-22T17:02:19,137 Created build tracker: /tmp/pip-build-tracker-vxmpv4y5 2022-11-22T17:02:19,137 Entered build tracker: /tmp/pip-build-tracker-vxmpv4y5 2022-11-22T17:02:19,137 Created temporary directory: /tmp/pip-wheel-ftrg_mi3 2022-11-22T17:02:19,140 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-22T17:02:19,143 Created temporary directory: /tmp/pip-ephem-wheel-cache-jc6q3gzv 2022-11-22T17:02:19,170 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-22T17:02:19,173 2 location(s) to search for versions of topopy: 2022-11-22T17:02:19,173 * https://pypi.org/simple/topopy/ 2022-11-22T17:02:19,173 * https://www.piwheels.org/simple/topopy/ 2022-11-22T17:02:19,173 Fetching project page and analyzing links: https://pypi.org/simple/topopy/ 2022-11-22T17:02:19,174 Getting page https://pypi.org/simple/topopy/ 2022-11-22T17:02:19,175 Found index url https://pypi.org/simple 2022-11-22T17:02:19,227 Fetched page https://pypi.org/simple/topopy/ as application/vnd.pypi.simple.v1+json 2022-11-22T17:02:19,237 Found link https://files.pythonhosted.org/packages/34/a5/ed5bc6d6e56350d7caf0e48706ddc668e0645968d9631ae2bd0a1965a6ac/topopy-0.0.1.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.1 2022-11-22T17:02:19,238 Found link https://files.pythonhosted.org/packages/f1/6a/027730be08c9913a9babd8d7c8853fed6f2be0c6fb52de6e21fee5a73018/topopy-0.0.2.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.2 2022-11-22T17:02:19,238 Found link https://files.pythonhosted.org/packages/ad/e9/b11e375eaf5fa63cf9c3bc634355f36d85aeaea5b0e94ff2f42da91c429f/topopy-0.0.3.tar.gz (from https://pypi.org/simple/topopy/), version: 0.0.3 2022-11-22T17:02:19,239 Found link https://files.pythonhosted.org/packages/37/89/0e5eadb0dba1b9db78904035de2d49739e49a107ea0be5a1a938ee6b9954/topopy-0.0.4.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.4 2022-11-22T17:02:19,239 Found link https://files.pythonhosted.org/packages/17/ed/7df44851ef043d8ef348ea55f036a8a944e03caee6bebfd2ed5f4d4dd8b9/topopy-0.0.5.0.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.5.0 2022-11-22T17:02:19,240 Found link https://files.pythonhosted.org/packages/94/fb/69a27d2a821bb4f5d005bac36b2aef5ca2678c7062ffec71117e25977c05/topopy-0.0.6.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.6 2022-11-22T17:02:19,241 Found link https://files.pythonhosted.org/packages/06/ec/214ff072d809d43e5ea23006491dafc46c3d39a170f64767f3d6c9349136/topopy-0.1.0.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.0 2022-11-22T17:02:19,241 Found link https://files.pythonhosted.org/packages/78/7d/9691d6c2b3313d7a1321a76df3954243685a076c7d78b32f1d6ca123472f/topopy-0.1.1.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.1 2022-11-22T17:02:19,242 Found link https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 1.0.0.dev4639326 2022-11-22T17:02:19,243 Found link https://files.pythonhosted.org/packages/63/de/d8d110f9e32e56498c5a6a14029b9db9fe6188b9cd5a20c6e35b75935c8c/topopy-1.0.0.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 1.0.0 2022-11-22T17:02:19,244 Found link https://files.pythonhosted.org/packages/6b/28/521f2cf7cc3bd23a75489859403847875855f62a4a3891a6eef348928136/topopy-1.0.1.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 1.0.1 2022-11-22T17:02:19,244 Skipping link: No binaries permitted for topopy: https://files.pythonhosted.org/packages/c4/ef/d2ed36c5dac429d673700668924727c76ead43d46f0fd345538e91350594/topopy-1.0.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,244 Skipping link: No binaries permitted for topopy: 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https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp34-cp34m-linux_armv7l.whl#sha256=5173bf2dc1492b10d861fb770a6d2c794a4855ae010b5b2a5c71b6e42ec5cdd6 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,473 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp34-cp34m-linux_armv6l.whl#sha256=5173bf2dc1492b10d861fb770a6d2c794a4855ae010b5b2a5c71b6e42ec5cdd6 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,474 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=e89b623c92c8ee28a7a9c275bebcdd7ac403caa4a060cf85f0bb881843f54fcd (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,474 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=e89b623c92c8ee28a7a9c275bebcdd7ac403caa4a060cf85f0bb881843f54fcd (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,474 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp39-cp39-linux_armv7l.whl#sha256=5e7d2ed04cecdf595f5dfe86b6cdc0339ac57935a6f97e0f87896cbe485e9475 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,474 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp39-cp39-linux_armv6l.whl#sha256=5e7d2ed04cecdf595f5dfe86b6cdc0339ac57935a6f97e0f87896cbe485e9475 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,474 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=065bd048f48d08ee2df0b01088bac987a5c5c61c84ed09a684aae37a662ca051 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,475 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=065bd048f48d08ee2df0b01088bac987a5c5c61c84ed09a684aae37a662ca051 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,475 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp34-cp34m-linux_armv6l.whl#sha256=a09b69fa2ef7d6e936d716a466c7aa963d5d39929a4bdb5135259caa6ff0a680 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,475 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp34-cp34m-linux_armv7l.whl#sha256=a09b69fa2ef7d6e936d716a466c7aa963d5d39929a4bdb5135259caa6ff0a680 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,475 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp35-cp35m-linux_armv7l.whl#sha256=0e9cb910f0c782ef2398f807f0ab9f91228b254ed0765de82b2fb6411514af3c (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,475 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp35-cp35m-linux_armv6l.whl#sha256=0e9cb910f0c782ef2398f807f0ab9f91228b254ed0765de82b2fb6411514af3c (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T17:02:19,476 Skipping link: not a file: https://www.piwheels.org/simple/topopy/ 2022-11-22T17:02:19,476 Skipping link: not a file: https://pypi.org/simple/topopy/ 2022-11-22T17:02:19,495 Given no hashes to check 1 links for project 'topopy': discarding no candidates 2022-11-22T17:02:19,512 Collecting topopy==1.0.2 2022-11-22T17:02:19,514 Created temporary directory: /tmp/pip-unpack-kgdkx6bn 2022-11-22T17:02:19,566 Downloading topopy-1.0.2.tar.gz (399 kB) 2022-11-22T17:02:19,813 Added topopy==1.0.2 from https://files.pythonhosted.org/packages/d1/50/fdf388816e7a2c6950af8c8fad90165abe518533fd6aa01bb0ce6846da38/topopy-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-vxmpv4y5' 2022-11-22T17:02:19,821 Created temporary directory: /tmp/pip-build-env-ryggp20n 2022-11-22T17:02:19,828 Installing build dependencies: started 2022-11-22T17:02:19,829 Running command pip subprocess to install build dependencies 2022-11-22T17:02:21,031 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-11-22T17:02:21,430 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-22T17:02:21,456 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-22T17:02:23,088 Collecting setuptools>=45 2022-11-22T17:02:23,283 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-22T17:02:23,689 Collecting setuptools_scm[toml]>=6.2 2022-11-22T17:02:23,728 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-11-22T17:02:23,979 Collecting wheel 2022-11-22T17:02:23,997 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-11-22T17:02:24,174 Collecting tomli>=1.0.0 2022-11-22T17:02:24,195 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-11-22T17:02:24,305 Collecting typing-extensions 2022-11-22T17:02:24,323 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-11-22T17:02:24,492 Collecting packaging>=20.0 2022-11-22T17:02:24,511 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-22T17:02:25,127 Collecting pyparsing!=3.0.5,>=2.0.2 2022-11-22T17:02:25,147 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-11-22T17:02:27,175 Installing collected packages: wheel, typing-extensions, tomli, setuptools, pyparsing, packaging, setuptools_scm 2022-11-22T17:02:27,333 Creating /tmp/pip-build-env-ryggp20n/overlay/bin 2022-11-22T17:02:27,336 changing mode of /tmp/pip-build-env-ryggp20n/overlay/bin/wheel to 755 2022-11-22T17:02:30,539 Successfully installed packaging-21.3 pyparsing-3.0.9 setuptools-65.6.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 2022-11-22T17:02:30,554 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-22T17:02:30,554 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-22T17:02:30,846 Installing build dependencies: finished with status 'done' 2022-11-22T17:02:30,851 Getting requirements to build wheel: started 2022-11-22T17:02:30,852 Running command Getting requirements to build wheel 2022-11-22T17:02:31,645 /tmp/pip-build-env-ryggp20n/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T17:02:31,645 warnings.warn( 2022-11-22T17:02:32,150 running egg_info 2022-11-22T17:02:32,158 writing topopy.egg-info/PKG-INFO 2022-11-22T17:02:32,161 writing dependency_links to topopy.egg-info/dependency_links.txt 2022-11-22T17:02:32,164 writing requirements to topopy.egg-info/requires.txt 2022-11-22T17:02:32,165 writing top-level names to topopy.egg-info/top_level.txt 2022-11-22T17:02:32,210 listing git files failed - pretending there aren't any 2022-11-22T17:02:32,221 reading manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:32,227 reading manifest template 'MANIFEST.in' 2022-11-22T17:02:32,232 adding license file 'LICENSE' 2022-11-22T17:02:32,236 writing manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:32,426 Getting requirements to build wheel: finished with status 'done' 2022-11-22T17:02:32,439 Created temporary directory: /tmp/pip-modern-metadata-mqozl7cj 2022-11-22T17:02:32,441 Preparing metadata (pyproject.toml): started 2022-11-22T17:02:32,442 Running command Preparing metadata (pyproject.toml) 2022-11-22T17:02:33,251 /tmp/pip-build-env-ryggp20n/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T17:02:33,252 warnings.warn( 2022-11-22T17:02:33,669 running dist_info 2022-11-22T17:02:33,677 creating /tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info 2022-11-22T17:02:33,683 writing /tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/PKG-INFO 2022-11-22T17:02:33,685 writing dependency_links to /tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/dependency_links.txt 2022-11-22T17:02:33,688 writing requirements to /tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/requires.txt 2022-11-22T17:02:33,689 writing top-level names to /tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/top_level.txt 2022-11-22T17:02:33,690 writing manifest file '/tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:33,733 listing git files failed - pretending there aren't any 2022-11-22T17:02:33,743 reading manifest file '/tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:33,748 reading manifest template 'MANIFEST.in' 2022-11-22T17:02:33,753 adding license file 'LICENSE' 2022-11-22T17:02:33,756 writing manifest file '/tmp/pip-modern-metadata-mqozl7cj/topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:33,757 creating '/tmp/pip-modern-metadata-mqozl7cj/topopy-1.0.2.dist-info' 2022-11-22T17:02:33,991 Preparing metadata (pyproject.toml): finished with status 'done' 2022-11-22T17:02:33,998 Source in /tmp/pip-wheel-ftrg_mi3/topopy_c1b4a32172e346d189912f7e6c08ea26 has version 1.0.2, which satisfies requirement topopy==1.0.2 from https://files.pythonhosted.org/packages/d1/50/fdf388816e7a2c6950af8c8fad90165abe518533fd6aa01bb0ce6846da38/topopy-1.0.2.tar.gz 2022-11-22T17:02:33,999 Removed topopy==1.0.2 from https://files.pythonhosted.org/packages/d1/50/fdf388816e7a2c6950af8c8fad90165abe518533fd6aa01bb0ce6846da38/topopy-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-vxmpv4y5' 2022-11-22T17:02:34,006 Created temporary directory: /tmp/pip-unpack-8ch2bwds 2022-11-22T17:02:34,006 Building wheels for collected packages: topopy 2022-11-22T17:02:34,011 Created temporary directory: /tmp/pip-wheel-rnmm_m4i 2022-11-22T17:02:34,012 Destination directory: /tmp/pip-wheel-rnmm_m4i 2022-11-22T17:02:34,014 Building wheel for topopy (pyproject.toml): started 2022-11-22T17:02:34,015 Running command Building wheel for topopy (pyproject.toml) 2022-11-22T17:02:34,811 /tmp/pip-build-env-ryggp20n/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T17:02:34,812 warnings.warn( 2022-11-22T17:02:35,217 running bdist_wheel 2022-11-22T17:02:35,237 running build 2022-11-22T17:02:35,238 running build_py 2022-11-22T17:02:35,245 creating build 2022-11-22T17:02:35,245 creating build/lib.linux-armv7l-cpython-39 2022-11-22T17:02:35,246 creating build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,247 copying topopy/MorseComplex.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,250 copying topopy/TopologicalObject.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,253 copying topopy/__init__.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,254 copying topopy/topology.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,258 copying topopy/ContourTree.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,260 copying topopy/MergeTree.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,263 copying topopy/MorseSmaleComplex.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T17:02:35,265 running egg_info 2022-11-22T17:02:35,277 writing topopy.egg-info/PKG-INFO 2022-11-22T17:02:35,279 writing dependency_links to topopy.egg-info/dependency_links.txt 2022-11-22T17:02:35,281 writing requirements to topopy.egg-info/requires.txt 2022-11-22T17:02:35,282 writing top-level names to topopy.egg-info/top_level.txt 2022-11-22T17:02:35,311 listing git files failed - pretending there aren't any 2022-11-22T17:02:35,321 reading manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:35,325 reading manifest template 'MANIFEST.in' 2022-11-22T17:02:35,329 adding license file 'LICENSE' 2022-11-22T17:02:35,333 writing manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T17:02:35,337 /tmp/pip-build-env-ryggp20n/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'topopy.tests' as data is deprecated, please list it in `packages`. 2022-11-22T17:02:35,337 !! 2022-11-22T17:02:35,338 ############################ 2022-11-22T17:02:35,338 # Package would be ignored # 2022-11-22T17:02:35,338 ############################ 2022-11-22T17:02:35,338 Python recognizes 'topopy.tests' as an importable package, 2022-11-22T17:02:35,338 but it is not listed in the `packages` configuration of setuptools. 2022-11-22T17:02:35,338 'topopy.tests' has been automatically added to the distribution only 2022-11-22T17:02:35,338 because it may contain data files, but this behavior is likely to change 2022-11-22T17:02:35,339 in future versions of setuptools (and therefore is considered deprecated). 2022-11-22T17:02:35,339 Please make sure that 'topopy.tests' is included as a package by using 2022-11-22T17:02:35,339 the `packages` configuration field or the proper discovery methods 2022-11-22T17:02:35,339 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-22T17:02:35,339 instead of `find_packages(...)`/`find:`). 2022-11-22T17:02:35,340 You can read more about "package discovery" and "data files" on setuptools 2022-11-22T17:02:35,340 documentation page. 2022-11-22T17:02:35,340 !! 2022-11-22T17:02:35,341 check.warn(importable) 2022-11-22T17:02:35,341 creating build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,341 copying topopy/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,343 copying topopy/tests/mc_gold.json -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,347 copying topopy/tests/msc_gold.json -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,352 copying topopy/tests/test_ct.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,355 copying topopy/tests/test_functions.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,359 copying topopy/tests/test_mc.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,363 copying topopy/tests/test_msc.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,366 copying topopy/tests/test_mt.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,369 copying topopy/tests/test_to.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T17:02:35,373 running build_ext 2022-11-22T17:02:35,380 building 'topopy._topology' extension 2022-11-22T17:02:35,381 creating build/temp.linux-armv7l-cpython-39 2022-11-22T17:02:35,382 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c MergeTree.cpp -o build/temp.linux-armv7l-cpython-39/MergeTree.o -O3 2022-11-22T17:02:49,248 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c MorseComplex.cpp -o build/temp.linux-armv7l-cpython-39/MorseComplex.o -O3 2022-11-22T17:02:54,879 In file included from /usr/include/c++/10/bits/stl_algo.h:61, 2022-11-22T17:02:54,880 from /usr/include/c++/10/algorithm:62, 2022-11-22T17:02:54,880 from MorseComplex.cpp:5: 2022-11-22T17:02:54,880 /usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T17:02:54,880 /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:54,880 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2022-11-22T17:02:54,880 | ^~~~~~~~~~~~~ 2022-11-22T17:02:54,914 In file included from /usr/include/c++/10/algorithm:62, 2022-11-22T17:02:54,914 from MorseComplex.cpp:5: 2022-11-22T17:02:54,915 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T17:02:54,915 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:54,915 1839 | __insertion_sort(_RandomAccessIterator __first, 2022-11-22T17:02:54,915 | ^~~~~~~~~~~~~~~~ 2022-11-22T17:02:54,915 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:54,915 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:55,113 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T17:02:55,114 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:55,114 1945 | __introsort_loop(_RandomAccessIterator __first, 2022-11-22T17:02:55,114 | ^~~~~~~~~~~~~~~~ 2022-11-22T17:02:55,114 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:55,115 /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:55,115 1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2022-11-22T17:02:55,115 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:56,223 In file included from /usr/include/c++/10/map:60, 2022-11-22T17:02:56,223 from MorseComplex.h:4, 2022-11-22T17:02:56,223 from MorseComplex.cpp:1: 2022-11-22T17:02:56,224 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]’: 2022-11-22T17:02:56,224 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:56,224 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-11-22T17:02:56,224 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,494 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2022-11-22T17:02:57,494 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:57,737 In file included from /usr/include/c++/10/map:61, 2022-11-22T17:02:57,738 from MorseComplex.h:4, 2022-11-22T17:02:57,738 from MorseComplex.cpp:1: 2022-11-22T17:02:57,738 /usr/include/c++/10/bits/stl_map.h: In member function ‘int MorseComplex::MaxLabel(int, T) [with T = double]’: 2022-11-22T17:02:57,738 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:57,738 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:57,738 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,739 502 | std::tuple(__k), 2022-11-22T17:02:57,739 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,739 503 | std::tuple<>()); 2022-11-22T17:02:57,739 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,739 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:57,739 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:57,739 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,740 502 | std::tuple(__k), 2022-11-22T17:02:57,740 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,740 503 | std::tuple<>()); 2022-11-22T17:02:57,740 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,842 In file included from /usr/include/c++/10/algorithm:62, 2022-11-22T17:02:57,843 from MorseComplex.cpp:5: 2022-11-22T17:02:57,843 /usr/include/c++/10/bits/stl_algo.h: In member function ‘std::vector MorseComplex::SortedPersistences() [with T = double]’: 2022-11-22T17:02:57,843 /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:57,843 1974 | std::__introsort_loop(__first, __last, 2022-11-22T17:02:57,843 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,844 1975 | std::__lg(__last - __first) * 2, 2022-11-22T17:02:57,844 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,844 1976 | __comp); 2022-11-22T17:02:57,844 | ~~~~~~~ 2022-11-22T17:02:57,844 /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:57,844 1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2022-11-22T17:02:57,844 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:57,845 /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:02:57,845 1891 | std::__insertion_sort(__first, __last, __comp); 2022-11-22T17:02:57,845 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,246 In file included from /usr/include/c++/10/map:61, 2022-11-22T17:02:58,246 from MorseComplex.h:4, 2022-11-22T17:02:58,247 from MorseComplex.cpp:1: 2022-11-22T17:02:58,247 /usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = Merge; _Compare = std::less; _Alloc = std::allocator > >]’: 2022-11-22T17:02:58,247 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:58,247 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:58,247 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,247 502 | std::tuple(__k), 2022-11-22T17:02:58,247 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,248 503 | std::tuple<>()); 2022-11-22T17:02:58,248 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,704 /usr/include/c++/10/bits/stl_map.h: In member function ‘std::map > MorseComplex::GetPartitions(T) [with T = double]’: 2022-11-22T17:02:58,704 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:58,704 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:58,704 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,704 502 | std::tuple(__k), 2022-11-22T17:02:58,705 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,705 503 | std::tuple<>()); 2022-11-22T17:02:58,705 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,705 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:58,705 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:58,705 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,705 502 | std::tuple(__k), 2022-11-22T17:02:58,706 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,706 503 | std::tuple<>()); 2022-11-22T17:02:58,706 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,706 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:58,706 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:58,706 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,706 502 | std::tuple(__k), 2022-11-22T17:02:58,707 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:58,707 503 | std::tuple<>()); 2022-11-22T17:02:58,707 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,788 /usr/include/c++/10/bits/stl_map.h: In member function ‘void MorseComplex::SteepestEdge() [with T = double]’: 2022-11-22T17:02:59,788 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:59,788 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:59,789 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,789 502 | std::tuple(__k), 2022-11-22T17:02:59,789 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,789 503 | std::tuple<>()); 2022-11-22T17:02:59,789 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,789 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:59,789 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:59,790 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,790 502 | std::tuple(__k), 2022-11-22T17:02:59,790 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,790 503 | std::tuple<>()); 2022-11-22T17:02:59,790 | ~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,790 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:02:59,790 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:02:59,791 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,791 502 | std::tuple(__k), 2022-11-22T17:02:59,791 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:02:59,791 503 | std::tuple<>()); 2022-11-22T17:02:59,791 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:02,471 In file included from /usr/include/c++/10/map:60, 2022-11-22T17:03:02,471 from MorseComplex.h:4, 2022-11-22T17:03:02,472 from MorseComplex.cpp:1: 2022-11-22T17:03:02,472 /usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2022-11-22T17:03:02,472 /usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:02,472 2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-11-22T17:03:02,472 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,034 In file included from /usr/include/c++/10/map:61, 2022-11-22T17:03:03,034 from MorseComplex.h:4, 2022-11-22T17:03:03,034 from MorseComplex.cpp:1: 2022-11-22T17:03:03,034 /usr/include/c++/10/bits/stl_map.h: In member function ‘void MorseComplex::ComputeMaximaPersistence() [with T = double]’: 2022-11-22T17:03:03,035 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,035 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,035 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,035 502 | std::tuple(__k), 2022-11-22T17:03:03,035 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,035 503 | std::tuple<>()); 2022-11-22T17:03:03,036 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,036 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,036 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,036 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,036 502 | std::tuple(__k), 2022-11-22T17:03:03,036 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,037 503 | std::tuple<>()); 2022-11-22T17:03:03,037 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,037 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,037 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,037 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,037 502 | std::tuple(__k), 2022-11-22T17:03:03,037 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,038 503 | std::tuple<>()); 2022-11-22T17:03:03,038 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,038 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,038 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,038 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,038 502 | std::tuple(__k), 2022-11-22T17:03:03,038 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,039 503 | std::tuple<>()); 2022-11-22T17:03:03,039 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,039 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,039 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,039 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,039 502 | std::tuple(__k), 2022-11-22T17:03:03,039 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,039 503 | std::tuple<>()); 2022-11-22T17:03:03,040 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,040 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,040 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,041 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,041 502 | std::tuple(__k), 2022-11-22T17:03:03,041 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,041 503 | std::tuple<>()); 2022-11-22T17:03:03,041 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,041 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,042 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,042 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,042 502 | std::tuple(__k), 2022-11-22T17:03:03,042 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,042 503 | std::tuple<>()); 2022-11-22T17:03:03,042 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,042 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,043 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,043 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,043 502 | std::tuple(__k), 2022-11-22T17:03:03,043 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,043 503 | std::tuple<>()); 2022-11-22T17:03:03,043 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,043 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,044 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,044 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,044 502 | std::tuple(__k), 2022-11-22T17:03:03,044 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,044 503 | std::tuple<>()); 2022-11-22T17:03:03,044 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,045 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,045 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,045 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,046 502 | std::tuple(__k), 2022-11-22T17:03:03,046 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,046 503 | std::tuple<>()); 2022-11-22T17:03:03,046 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,047 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T17:03:03,047 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T17:03:03,047 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,047 502 | std::tuple(__k), 2022-11-22T17:03:03,047 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:03,047 503 | std::tuple<>()); 2022-11-22T17:03:03,048 | ~~~~~~~~~~~~~~~ 2022-11-22T17:03:07,196 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c UnionFind.cpp -o build/temp.linux-armv7l-cpython-39/UnionFind.o -O3 2022-11-22T17:03:09,918 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c topology_wrap.cpp -o build/temp.linux-armv7l-cpython-39/topology_wrap.o -O3 2022-11-22T17:03:50,795 In file included from /usr/include/c++/10/vector:72, 2022-11-22T17:03:50,795 from topology_wrap.cpp:3321: 2022-11-22T17:03:50,795 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-11-22T17:03:50,795 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-11-22T17:03:50,795 426 | vector<_Tp, _Alloc>:: 2022-11-22T17:03:50,796 | ^~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:50,837 In file included from /usr/include/c++/10/vector:67, 2022-11-22T17:03:50,838 from topology_wrap.cpp:3321: 2022-11-22T17:03:50,838 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_push_back(PyObject*, PyObject*)’: 2022-11-22T17:03:50,838 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:50,838 1198 | _M_realloc_insert(end(), __x); 2022-11-22T17:03:50,838 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T17:03:50,915 /usr/include/c++/10/bits/stl_vector.h: In function ‘Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]’: 2022-11-22T17:03:50,915 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:50,916 1198 | _M_realloc_insert(end(), __x); 2022-11-22T17:03:50,916 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T17:03:50,916 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:50,917 1198 | _M_realloc_insert(end(), __x); 2022-11-22T17:03:50,917 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T17:03:50,917 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:51,002 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_append(PyObject*, PyObject*)’: 2022-11-22T17:03:51,003 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:51,003 1198 | _M_realloc_insert(end(), __x); 2022-11-22T17:03:51,003 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T17:03:51,078 In file included from /usr/include/c++/10/vector:72, 2022-11-22T17:03:51,078 from topology_wrap.cpp:3321: 2022-11-22T17:03:51,078 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2022-11-22T17:03:51,078 /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-11-22T17:03:51,078 509 | vector<_Tp, _Alloc>:: 2022-11-22T17:03:51,079 | ^~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:57,685 /usr/include/c++/10/bits/vector.tcc: In function ‘PyObject* _wrap_vectorDouble_insert(PyObject*, PyObject*)’: 2022-11-22T17:03:57,685 /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:57,685 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2022-11-22T17:03:57,686 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:57,687 In file included from /usr/include/c++/10/vector:67, 2022-11-22T17:03:57,687 from topology_wrap.cpp:3321: 2022-11-22T17:03:57,687 /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:57,688 1338 | _M_fill_insert(begin() + __offset, __n, __x); 2022-11-22T17:03:57,688 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:03:57,846 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_resize(PyObject*, PyObject*)’: 2022-11-22T17:03:57,846 /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T17:03:57,846 960 | _M_fill_insert(end(), __new_size - size(), __x); 2022-11-22T17:03:57,846 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T17:04:20,428 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c utils.cpp -o build/temp.linux-armv7l-cpython-39/utils.o -O3 2022-11-22T17:04:21,761 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/MergeTree.o build/temp.linux-armv7l-cpython-39/MorseComplex.o build/temp.linux-armv7l-cpython-39/UnionFind.o build/temp.linux-armv7l-cpython-39/topology_wrap.o build/temp.linux-armv7l-cpython-39/utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/topopy/_topology.cpython-39-arm-linux-gnueabihf.so 2022-11-22T17:04:22,994 installing to build/bdist.linux-armv7l/wheel 2022-11-22T17:04:22,995 running install 2022-11-22T17:04:23,022 running install_lib 2022-11-22T17:04:23,028 creating build/bdist.linux-armv7l 2022-11-22T17:04:23,029 creating build/bdist.linux-armv7l/wheel 2022-11-22T17:04:23,032 creating build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,033 copying build/lib.linux-armv7l-cpython-39/topopy/MorseComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,037 copying build/lib.linux-armv7l-cpython-39/topopy/_topology.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,244 creating build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,245 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_mc.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,248 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_functions.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,251 copying build/lib.linux-armv7l-cpython-39/topopy/tests/__init__.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,252 copying build/lib.linux-armv7l-cpython-39/topopy/tests/mc_gold.json -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,255 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_to.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,258 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_mt.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,260 copying build/lib.linux-armv7l-cpython-39/topopy/tests/msc_gold.json -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,264 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_msc.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,267 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_ct.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T17:04:23,269 copying build/lib.linux-armv7l-cpython-39/topopy/TopologicalObject.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,272 copying build/lib.linux-armv7l-cpython-39/topopy/__init__.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,274 copying build/lib.linux-armv7l-cpython-39/topopy/topology.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,278 copying build/lib.linux-armv7l-cpython-39/topopy/ContourTree.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,281 copying build/lib.linux-armv7l-cpython-39/topopy/MergeTree.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,283 copying build/lib.linux-armv7l-cpython-39/topopy/MorseSmaleComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T17:04:23,286 running install_egg_info 2022-11-22T17:04:23,292 Copying topopy.egg-info to build/bdist.linux-armv7l/wheel/topopy-1.0.2-py3.9.egg-info 2022-11-22T17:04:23,305 running install_scripts 2022-11-22T17:04:23,362 creating build/bdist.linux-armv7l/wheel/topopy-1.0.2.dist-info/WHEEL 2022-11-22T17:04:23,365 creating '/tmp/pip-wheel-rnmm_m4i/tmpo1lrzqhj/topopy-1.0.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-22T17:04:23,369 adding 'topopy/ContourTree.py' 2022-11-22T17:04:23,371 adding 'topopy/MergeTree.py' 2022-11-22T17:04:23,373 adding 'topopy/MorseComplex.py' 2022-11-22T17:04:23,376 adding 'topopy/MorseSmaleComplex.py' 2022-11-22T17:04:23,378 adding 'topopy/TopologicalObject.py' 2022-11-22T17:04:23,380 adding 'topopy/__init__.py' 2022-11-22T17:04:24,872 adding 'topopy/_topology.cpython-39-arm-linux-gnueabihf.so' 2022-11-22T17:04:24,936 adding 'topopy/topology.py' 2022-11-22T17:04:24,938 adding 'topopy/tests/__init__.py' 2022-11-22T17:04:24,940 adding 'topopy/tests/mc_gold.json' 2022-11-22T17:04:24,942 adding 'topopy/tests/msc_gold.json' 2022-11-22T17:04:24,944 adding 'topopy/tests/test_ct.py' 2022-11-22T17:04:24,946 adding 'topopy/tests/test_functions.py' 2022-11-22T17:04:24,949 adding 'topopy/tests/test_mc.py' 2022-11-22T17:04:24,951 adding 'topopy/tests/test_msc.py' 2022-11-22T17:04:24,952 adding 'topopy/tests/test_mt.py' 2022-11-22T17:04:24,954 adding 'topopy/tests/test_to.py' 2022-11-22T17:04:24,957 adding 'topopy-1.0.2.dist-info/LICENSE' 2022-11-22T17:04:24,958 adding 'topopy-1.0.2.dist-info/METADATA' 2022-11-22T17:04:24,959 adding 'topopy-1.0.2.dist-info/WHEEL' 2022-11-22T17:04:24,960 adding 'topopy-1.0.2.dist-info/top_level.txt' 2022-11-22T17:04:24,961 adding 'topopy-1.0.2.dist-info/RECORD' 2022-11-22T17:04:25,007 removing build/bdist.linux-armv7l/wheel 2022-11-22T17:04:25,206 Building wheel for topopy (pyproject.toml): finished with status 'done' 2022-11-22T17:04:25,279 Created wheel for topopy: filename=topopy-1.0.2-cp39-cp39-linux_armv7l.whl size=3049117 sha256=f7f40df8a5a076a2f75262b0411e75d8d08ddf04f87901b1303cdc10746568bf 2022-11-22T17:04:25,280 Stored in directory: /tmp/pip-ephem-wheel-cache-jc6q3gzv/wheels/04/c3/fa/5b256033501e337ef738be1f09304e5962c8c034165335c30f 2022-11-22T17:04:25,294 Successfully built topopy 2022-11-22T17:04:25,391 Removed build tracker: '/tmp/pip-build-tracker-vxmpv4y5'