2022-11-22T19:05:01,661 Created temporary directory: /tmp/pip-ephem-wheel-cache-whhpjazm 2022-11-22T19:05:01,663 Created temporary directory: /tmp/pip-build-tracker-o98ago50 2022-11-22T19:05:01,663 Initialized build tracking at /tmp/pip-build-tracker-o98ago50 2022-11-22T19:05:01,664 Created build tracker: /tmp/pip-build-tracker-o98ago50 2022-11-22T19:05:01,664 Entered build tracker: /tmp/pip-build-tracker-o98ago50 2022-11-22T19:05:01,664 Created temporary directory: /tmp/pip-wheel-e96vxuu1 2022-11-22T19:05:01,668 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-22T19:05:01,670 Created temporary directory: /tmp/pip-ephem-wheel-cache-4hpcw76d 2022-11-22T19:05:01,696 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-22T19:05:01,699 2 location(s) to search for versions of topopy: 2022-11-22T19:05:01,699 * https://pypi.org/simple/topopy/ 2022-11-22T19:05:01,699 * https://www.piwheels.org/simple/topopy/ 2022-11-22T19:05:01,700 Fetching project page and analyzing links: https://pypi.org/simple/topopy/ 2022-11-22T19:05:01,700 Getting page https://pypi.org/simple/topopy/ 2022-11-22T19:05:01,702 Found index url https://pypi.org/simple 2022-11-22T19:05:01,791 Fetched page https://pypi.org/simple/topopy/ as application/vnd.pypi.simple.v1+json 2022-11-22T19:05:01,816 Found link https://files.pythonhosted.org/packages/34/a5/ed5bc6d6e56350d7caf0e48706ddc668e0645968d9631ae2bd0a1965a6ac/topopy-0.0.1.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.1 2022-11-22T19:05:01,817 Found link https://files.pythonhosted.org/packages/f1/6a/027730be08c9913a9babd8d7c8853fed6f2be0c6fb52de6e21fee5a73018/topopy-0.0.2.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.2 2022-11-22T19:05:01,818 Found link https://files.pythonhosted.org/packages/ad/e9/b11e375eaf5fa63cf9c3bc634355f36d85aeaea5b0e94ff2f42da91c429f/topopy-0.0.3.tar.gz (from https://pypi.org/simple/topopy/), version: 0.0.3 2022-11-22T19:05:01,818 Found link https://files.pythonhosted.org/packages/37/89/0e5eadb0dba1b9db78904035de2d49739e49a107ea0be5a1a938ee6b9954/topopy-0.0.4.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.4 2022-11-22T19:05:01,819 Found link https://files.pythonhosted.org/packages/17/ed/7df44851ef043d8ef348ea55f036a8a944e03caee6bebfd2ed5f4d4dd8b9/topopy-0.0.5.0.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.5.0 2022-11-22T19:05:01,820 Found link https://files.pythonhosted.org/packages/94/fb/69a27d2a821bb4f5d005bac36b2aef5ca2678c7062ffec71117e25977c05/topopy-0.0.6.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.6 2022-11-22T19:05:01,820 Found link https://files.pythonhosted.org/packages/06/ec/214ff072d809d43e5ea23006491dafc46c3d39a170f64767f3d6c9349136/topopy-0.1.0.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.0 2022-11-22T19:05:01,821 Found link https://files.pythonhosted.org/packages/78/7d/9691d6c2b3313d7a1321a76df3954243685a076c7d78b32f1d6ca123472f/topopy-0.1.1.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.1 2022-11-22T19:05:01,822 Found link https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 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https://files.pythonhosted.org/packages/24/e5/50e0058c0b60f714aed3c73785371a84cd7eaa055382bacd505d46afaee6/topopy-1.0.4-pp39-pypy39_pp73-manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:01,850 Skipping link: No binaries permitted for topopy: https://files.pythonhosted.org/packages/c4/21/37f9a4649cf4bfce7af32edf2d4c7c29a4abd915a3fbd9dc63b48c6e6736/topopy-1.0.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:01,850 Skipping link: No binaries permitted for topopy: https://files.pythonhosted.org/packages/9d/c4/c9f89bbd6ba51c54ae3d6727850df562d93ecbbf23f79d6001ceafbe6535/topopy-1.0.4-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:01,851 Found link 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https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=18cef024bfe4c5bb79db60797861bae0dda4d77923e81e86cca0b9173e35f58d (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,167 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=18cef024bfe4c5bb79db60797861bae0dda4d77923e81e86cca0b9173e35f58d (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,167 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp34-cp34m-linux_armv7l.whl#sha256=5173bf2dc1492b10d861fb770a6d2c794a4855ae010b5b2a5c71b6e42ec5cdd6 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,168 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp34-cp34m-linux_armv6l.whl#sha256=5173bf2dc1492b10d861fb770a6d2c794a4855ae010b5b2a5c71b6e42ec5cdd6 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,168 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=e89b623c92c8ee28a7a9c275bebcdd7ac403caa4a060cf85f0bb881843f54fcd (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,168 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=e89b623c92c8ee28a7a9c275bebcdd7ac403caa4a060cf85f0bb881843f54fcd (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,168 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp39-cp39-linux_armv7l.whl#sha256=5e7d2ed04cecdf595f5dfe86b6cdc0339ac57935a6f97e0f87896cbe485e9475 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,168 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp39-cp39-linux_armv6l.whl#sha256=5e7d2ed04cecdf595f5dfe86b6cdc0339ac57935a6f97e0f87896cbe485e9475 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,169 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=065bd048f48d08ee2df0b01088bac987a5c5c61c84ed09a684aae37a662ca051 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,169 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=065bd048f48d08ee2df0b01088bac987a5c5c61c84ed09a684aae37a662ca051 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,169 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp34-cp34m-linux_armv6l.whl#sha256=a09b69fa2ef7d6e936d716a466c7aa963d5d39929a4bdb5135259caa6ff0a680 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,169 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp34-cp34m-linux_armv7l.whl#sha256=a09b69fa2ef7d6e936d716a466c7aa963d5d39929a4bdb5135259caa6ff0a680 (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,169 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp35-cp35m-linux_armv7l.whl#sha256=0e9cb910f0c782ef2398f807f0ab9f91228b254ed0765de82b2fb6411514af3c (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,170 Skipping link: No binaries permitted for topopy: https://www.piwheels.org/simple/topopy/topopy-0.0.1-cp35-cp35m-linux_armv6l.whl#sha256=0e9cb910f0c782ef2398f807f0ab9f91228b254ed0765de82b2fb6411514af3c (from https://www.piwheels.org/simple/topopy/) (requires-python:>=2.7, <4) 2022-11-22T19:05:02,170 Skipping link: not a file: https://www.piwheels.org/simple/topopy/ 2022-11-22T19:05:02,170 Skipping link: not a file: https://pypi.org/simple/topopy/ 2022-11-22T19:05:02,190 Given no hashes to check 1 links for project 'topopy': discarding no candidates 2022-11-22T19:05:02,206 Collecting topopy==1.0.4 2022-11-22T19:05:02,209 Created temporary directory: /tmp/pip-unpack-lol6twts 2022-11-22T19:05:02,254 Downloading topopy-1.0.4.tar.gz (399 kB) 2022-11-22T19:05:02,484 Added topopy==1.0.4 from https://files.pythonhosted.org/packages/40/7c/c62b38cbf211e59183491cb5b417b97a6e366c3b0ca594166b1e39ab2d00/topopy-1.0.4.tar.gz to build tracker '/tmp/pip-build-tracker-o98ago50' 2022-11-22T19:05:02,491 Created temporary directory: /tmp/pip-build-env-ddzpiasl 2022-11-22T19:05:02,499 Installing build dependencies: started 2022-11-22T19:05:02,500 Running command pip subprocess to install build dependencies 2022-11-22T19:05:03,749 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-11-22T19:05:04,156 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-22T19:05:04,181 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-22T19:05:05,771 Collecting setuptools>=45 2022-11-22T19:05:05,890 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.0-py3-none-any.whl (1.2 MB) 2022-11-22T19:05:06,330 Collecting setuptools_scm[toml]>=6.2 2022-11-22T19:05:06,367 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-11-22T19:05:06,596 Collecting wheel 2022-11-22T19:05:06,617 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-11-22T19:05:06,765 Collecting tomli>=1.0.0 2022-11-22T19:05:06,782 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-11-22T19:05:06,945 Collecting packaging>=20.0 2022-11-22T19:05:06,977 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-11-22T19:05:07,077 Collecting typing-extensions 2022-11-22T19:05:07,094 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-11-22T19:05:07,700 Collecting pyparsing!=3.0.5,>=2.0.2 2022-11-22T19:05:07,721 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-11-22T19:05:10,109 Installing collected packages: wheel, typing-extensions, tomli, setuptools, pyparsing, packaging, setuptools_scm 2022-11-22T19:05:10,254 Creating /tmp/pip-build-env-ddzpiasl/overlay/bin 2022-11-22T19:05:10,256 changing mode of /tmp/pip-build-env-ddzpiasl/overlay/bin/wheel to 755 2022-11-22T19:05:13,484 Successfully installed packaging-21.3 pyparsing-3.0.9 setuptools-65.6.0 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 2022-11-22T19:05:13,499 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-11-22T19:05:13,500 [notice] To update, run: python3 -m pip install --upgrade pip 2022-11-22T19:05:13,808 Installing build dependencies: finished with status 'done' 2022-11-22T19:05:13,814 Getting requirements to build wheel: started 2022-11-22T19:05:13,815 Running command Getting requirements to build wheel 2022-11-22T19:05:14,575 /tmp/pip-build-env-ddzpiasl/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T19:05:14,576 warnings.warn( 2022-11-22T19:05:15,079 running egg_info 2022-11-22T19:05:15,087 writing topopy.egg-info/PKG-INFO 2022-11-22T19:05:15,090 writing dependency_links to topopy.egg-info/dependency_links.txt 2022-11-22T19:05:15,092 writing requirements to topopy.egg-info/requires.txt 2022-11-22T19:05:15,093 writing top-level names to topopy.egg-info/top_level.txt 2022-11-22T19:05:15,139 listing git files failed - pretending there aren't any 2022-11-22T19:05:15,149 reading manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:15,156 reading manifest template 'MANIFEST.in' 2022-11-22T19:05:15,160 adding license file 'LICENSE' 2022-11-22T19:05:15,164 writing manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:15,349 Getting requirements to build wheel: finished with status 'done' 2022-11-22T19:05:15,362 Created temporary directory: /tmp/pip-modern-metadata-t_s5wyyc 2022-11-22T19:05:15,365 Preparing metadata (pyproject.toml): started 2022-11-22T19:05:15,366 Running command Preparing metadata (pyproject.toml) 2022-11-22T19:05:16,166 /tmp/pip-build-env-ddzpiasl/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T19:05:16,167 warnings.warn( 2022-11-22T19:05:16,559 running dist_info 2022-11-22T19:05:16,568 creating /tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info 2022-11-22T19:05:16,574 writing /tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/PKG-INFO 2022-11-22T19:05:16,576 writing dependency_links to /tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/dependency_links.txt 2022-11-22T19:05:16,578 writing requirements to /tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/requires.txt 2022-11-22T19:05:16,580 writing top-level names to /tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/top_level.txt 2022-11-22T19:05:16,581 writing manifest file '/tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:16,623 listing git files failed - pretending there aren't any 2022-11-22T19:05:16,633 reading manifest file '/tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:16,638 reading manifest template 'MANIFEST.in' 2022-11-22T19:05:16,643 adding license file 'LICENSE' 2022-11-22T19:05:16,645 writing manifest file '/tmp/pip-modern-metadata-t_s5wyyc/topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:16,646 creating '/tmp/pip-modern-metadata-t_s5wyyc/topopy-1.0.4.dist-info' 2022-11-22T19:05:16,876 Preparing metadata (pyproject.toml): finished with status 'done' 2022-11-22T19:05:16,883 Source in /tmp/pip-wheel-e96vxuu1/topopy_08c836abf7384d908031ca797754c0cb has version 1.0.4, which satisfies requirement topopy==1.0.4 from https://files.pythonhosted.org/packages/40/7c/c62b38cbf211e59183491cb5b417b97a6e366c3b0ca594166b1e39ab2d00/topopy-1.0.4.tar.gz 2022-11-22T19:05:16,884 Removed topopy==1.0.4 from https://files.pythonhosted.org/packages/40/7c/c62b38cbf211e59183491cb5b417b97a6e366c3b0ca594166b1e39ab2d00/topopy-1.0.4.tar.gz from build tracker '/tmp/pip-build-tracker-o98ago50' 2022-11-22T19:05:16,894 Created temporary directory: /tmp/pip-unpack-n0g7llrk 2022-11-22T19:05:16,895 Building wheels for collected packages: topopy 2022-11-22T19:05:16,899 Created temporary directory: /tmp/pip-wheel-wjo8_6lx 2022-11-22T19:05:16,899 Destination directory: /tmp/pip-wheel-wjo8_6lx 2022-11-22T19:05:16,902 Building wheel for topopy (pyproject.toml): started 2022-11-22T19:05:16,903 Running command Building wheel for topopy (pyproject.toml) 2022-11-22T19:05:17,685 /tmp/pip-build-env-ddzpiasl/overlay/lib/python3.9/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead 2022-11-22T19:05:17,686 warnings.warn( 2022-11-22T19:05:18,071 running bdist_wheel 2022-11-22T19:05:18,092 running build 2022-11-22T19:05:18,092 running build_py 2022-11-22T19:05:18,099 creating build 2022-11-22T19:05:18,100 creating build/lib.linux-armv7l-cpython-39 2022-11-22T19:05:18,101 creating build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,102 copying topopy/topology.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,105 copying topopy/ContourTree.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,108 copying topopy/MergeTree.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,110 copying topopy/MorseSmaleComplex.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,113 copying topopy/MorseComplex.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,115 copying topopy/__init__.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,117 copying topopy/TopologicalObject.py -> build/lib.linux-armv7l-cpython-39/topopy 2022-11-22T19:05:18,119 running egg_info 2022-11-22T19:05:18,131 writing topopy.egg-info/PKG-INFO 2022-11-22T19:05:18,133 writing dependency_links to topopy.egg-info/dependency_links.txt 2022-11-22T19:05:18,135 writing requirements to topopy.egg-info/requires.txt 2022-11-22T19:05:18,136 writing top-level names to topopy.egg-info/top_level.txt 2022-11-22T19:05:18,164 listing git files failed - pretending there aren't any 2022-11-22T19:05:18,173 reading manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:18,176 reading manifest template 'MANIFEST.in' 2022-11-22T19:05:18,181 adding license file 'LICENSE' 2022-11-22T19:05:18,185 writing manifest file 'topopy.egg-info/SOURCES.txt' 2022-11-22T19:05:18,188 /tmp/pip-build-env-ddzpiasl/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'topopy.tests' as data is deprecated, please list it in `packages`. 2022-11-22T19:05:18,188 !! 2022-11-22T19:05:18,189 ############################ 2022-11-22T19:05:18,189 # Package would be ignored # 2022-11-22T19:05:18,189 ############################ 2022-11-22T19:05:18,189 Python recognizes 'topopy.tests' as an importable package, 2022-11-22T19:05:18,189 but it is not listed in the `packages` configuration of setuptools. 2022-11-22T19:05:18,189 'topopy.tests' has been automatically added to the distribution only 2022-11-22T19:05:18,190 because it may contain data files, but this behavior is likely to change 2022-11-22T19:05:18,190 in future versions of setuptools (and therefore is considered deprecated). 2022-11-22T19:05:18,190 Please make sure that 'topopy.tests' is included as a package by using 2022-11-22T19:05:18,190 the `packages` configuration field or the proper discovery methods 2022-11-22T19:05:18,190 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-22T19:05:18,190 instead of `find_packages(...)`/`find:`). 2022-11-22T19:05:18,191 You can read more about "package discovery" and "data files" on setuptools 2022-11-22T19:05:18,191 documentation page. 2022-11-22T19:05:18,191 !! 2022-11-22T19:05:18,191 check.warn(importable) 2022-11-22T19:05:18,192 creating build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,192 copying topopy/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,193 copying topopy/tests/mc_gold.json -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,196 copying topopy/tests/msc_gold.json -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,200 copying topopy/tests/test_ct.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,203 copying topopy/tests/test_functions.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,206 copying topopy/tests/test_mc.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,209 copying topopy/tests/test_msc.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,212 copying topopy/tests/test_mt.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,214 copying topopy/tests/test_to.py -> build/lib.linux-armv7l-cpython-39/topopy/tests 2022-11-22T19:05:18,218 running build_ext 2022-11-22T19:05:18,224 building 'topopy._topology' extension 2022-11-22T19:05:18,225 creating build/temp.linux-armv7l-cpython-39 2022-11-22T19:05:18,226 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c MergeTree.cpp -o build/temp.linux-armv7l-cpython-39/MergeTree.o -O3 2022-11-22T19:05:30,273 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c MorseComplex.cpp -o build/temp.linux-armv7l-cpython-39/MorseComplex.o -O3 2022-11-22T19:05:35,866 In file included from /usr/include/c++/10/bits/stl_algo.h:61, 2022-11-22T19:05:35,867 from /usr/include/c++/10/algorithm:62, 2022-11-22T19:05:35,867 from MorseComplex.cpp:5: 2022-11-22T19:05:35,867 /usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T19:05:35,867 /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:35,867 223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2022-11-22T19:05:35,867 | ^~~~~~~~~~~~~ 2022-11-22T19:05:35,902 In file included from /usr/include/c++/10/algorithm:62, 2022-11-22T19:05:35,903 from MorseComplex.cpp:5: 2022-11-22T19:05:35,903 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T19:05:35,903 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:35,903 1839 | __insertion_sort(_RandomAccessIterator __first, 2022-11-22T19:05:35,903 | ^~~~~~~~~~~~~~~~ 2022-11-22T19:05:35,903 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:35,904 /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:36,102 /usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2022-11-22T19:05:36,103 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:36,103 1945 | __introsort_loop(_RandomAccessIterator __first, 2022-11-22T19:05:36,103 | ^~~~~~~~~~~~~~~~ 2022-11-22T19:05:36,103 /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:36,104 /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:36,104 1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2022-11-22T19:05:36,104 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:37,207 In file included from /usr/include/c++/10/map:60, 2022-11-22T19:05:37,207 from MorseComplex.h:4, 2022-11-22T19:05:37,207 from MorseComplex.cpp:1: 2022-11-22T19:05:37,208 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]’: 2022-11-22T19:05:37,208 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:37,208 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-11-22T19:05:37,208 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,474 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2022-11-22T19:05:38,474 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:38,717 In file included from /usr/include/c++/10/map:61, 2022-11-22T19:05:38,717 from MorseComplex.h:4, 2022-11-22T19:05:38,717 from MorseComplex.cpp:1: 2022-11-22T19:05:38,717 /usr/include/c++/10/bits/stl_map.h: In member function ‘int MorseComplex::MaxLabel(int, T) [with T = double]’: 2022-11-22T19:05:38,717 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:38,718 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:38,718 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,718 502 | std::tuple(__k), 2022-11-22T19:05:38,718 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,718 503 | std::tuple<>()); 2022-11-22T19:05:38,718 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,719 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:38,719 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:38,719 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,719 502 | std::tuple(__k), 2022-11-22T19:05:38,720 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,720 503 | std::tuple<>()); 2022-11-22T19:05:38,720 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,824 In file included from /usr/include/c++/10/algorithm:62, 2022-11-22T19:05:38,824 from MorseComplex.cpp:5: 2022-11-22T19:05:38,824 /usr/include/c++/10/bits/stl_algo.h: In member function ‘std::vector MorseComplex::SortedPersistences() [with T = double]’: 2022-11-22T19:05:38,825 /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:38,825 1974 | std::__introsort_loop(__first, __last, 2022-11-22T19:05:38,825 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,825 1975 | std::__lg(__last - __first) * 2, 2022-11-22T19:05:38,825 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,825 1976 | __comp); 2022-11-22T19:05:38,825 | ~~~~~~~ 2022-11-22T19:05:38,826 /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:38,826 1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2022-11-22T19:05:38,826 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:38,826 /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:05:38,826 1891 | std::__insertion_sort(__first, __last, __comp); 2022-11-22T19:05:38,826 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,225 In file included from /usr/include/c++/10/map:61, 2022-11-22T19:05:39,225 from MorseComplex.h:4, 2022-11-22T19:05:39,225 from MorseComplex.cpp:1: 2022-11-22T19:05:39,225 /usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = Merge; _Compare = std::less; _Alloc = std::allocator > >]’: 2022-11-22T19:05:39,225 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:39,225 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:39,225 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,226 502 | std::tuple(__k), 2022-11-22T19:05:39,226 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,226 503 | std::tuple<>()); 2022-11-22T19:05:39,226 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,679 /usr/include/c++/10/bits/stl_map.h: In member function ‘std::map > MorseComplex::GetPartitions(T) [with T = double]’: 2022-11-22T19:05:39,679 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:39,680 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:39,680 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,680 502 | std::tuple(__k), 2022-11-22T19:05:39,680 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,680 503 | std::tuple<>()); 2022-11-22T19:05:39,680 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,681 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:39,681 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:39,681 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,681 502 | std::tuple(__k), 2022-11-22T19:05:39,681 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,681 503 | std::tuple<>()); 2022-11-22T19:05:39,681 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,682 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:39,682 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:39,682 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,682 502 | std::tuple(__k), 2022-11-22T19:05:39,682 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:39,682 503 | std::tuple<>()); 2022-11-22T19:05:39,682 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,756 /usr/include/c++/10/bits/stl_map.h: In member function ‘void MorseComplex::SteepestEdge() [with T = double]’: 2022-11-22T19:05:40,756 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:40,757 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:40,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,757 502 | std::tuple(__k), 2022-11-22T19:05:40,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,757 503 | std::tuple<>()); 2022-11-22T19:05:40,757 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,758 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:40,758 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:40,758 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,758 502 | std::tuple(__k), 2022-11-22T19:05:40,758 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,758 503 | std::tuple<>()); 2022-11-22T19:05:40,758 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,759 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:40,759 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:40,759 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,759 502 | std::tuple(__k), 2022-11-22T19:05:40,759 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:40,759 503 | std::tuple<>()); 2022-11-22T19:05:40,759 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,422 In file included from /usr/include/c++/10/map:60, 2022-11-22T19:05:43,423 from MorseComplex.h:4, 2022-11-22T19:05:43,423 from MorseComplex.cpp:1: 2022-11-22T19:05:43,423 /usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2022-11-22T19:05:43,423 /usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,423 2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-11-22T19:05:43,423 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,987 In file included from /usr/include/c++/10/map:61, 2022-11-22T19:05:43,987 from MorseComplex.h:4, 2022-11-22T19:05:43,987 from MorseComplex.cpp:1: 2022-11-22T19:05:43,988 /usr/include/c++/10/bits/stl_map.h: In member function ‘void MorseComplex::ComputeMaximaPersistence() [with T = double]’: 2022-11-22T19:05:43,988 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,988 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,988 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,988 502 | std::tuple(__k), 2022-11-22T19:05:43,988 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,988 503 | std::tuple<>()); 2022-11-22T19:05:43,989 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,989 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,989 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,989 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,989 502 | std::tuple(__k), 2022-11-22T19:05:43,989 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,990 503 | std::tuple<>()); 2022-11-22T19:05:43,990 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,990 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,990 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,990 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,990 502 | std::tuple(__k), 2022-11-22T19:05:43,990 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,991 503 | std::tuple<>()); 2022-11-22T19:05:43,991 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,991 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,991 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,991 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,991 502 | std::tuple(__k), 2022-11-22T19:05:43,991 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,992 503 | std::tuple<>()); 2022-11-22T19:05:43,992 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,992 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,992 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,992 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,992 502 | std::tuple(__k), 2022-11-22T19:05:43,992 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,993 503 | std::tuple<>()); 2022-11-22T19:05:43,993 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,993 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,994 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,994 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,994 502 | std::tuple(__k), 2022-11-22T19:05:43,994 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,994 503 | std::tuple<>()); 2022-11-22T19:05:43,994 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,994 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,995 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,995 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,995 502 | std::tuple(__k), 2022-11-22T19:05:43,995 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,995 503 | std::tuple<>()); 2022-11-22T19:05:43,995 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,995 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,996 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,996 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,996 502 | std::tuple(__k), 2022-11-22T19:05:43,996 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,996 503 | std::tuple<>()); 2022-11-22T19:05:43,996 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,996 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,997 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,997 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,997 502 | std::tuple(__k), 2022-11-22T19:05:43,997 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,997 503 | std::tuple<>()); 2022-11-22T19:05:43,997 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,998 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:43,998 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:43,998 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,999 502 | std::tuple(__k), 2022-11-22T19:05:43,999 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:43,999 503 | std::tuple<>()); 2022-11-22T19:05:43,999 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:44,000 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ changed in GCC 7.1 2022-11-22T19:05:44,000 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-11-22T19:05:44,000 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:44,000 502 | std::tuple(__k), 2022-11-22T19:05:44,000 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:05:44,000 503 | std::tuple<>()); 2022-11-22T19:05:44,001 | ~~~~~~~~~~~~~~~ 2022-11-22T19:05:48,130 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c UnionFind.cpp -o build/temp.linux-armv7l-cpython-39/UnionFind.o -O3 2022-11-22T19:05:50,829 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c topology_wrap.cpp -o build/temp.linux-armv7l-cpython-39/topology_wrap.o -O3 2022-11-22T19:06:31,346 In file included from /usr/include/c++/10/vector:72, 2022-11-22T19:06:31,346 from topology_wrap.cpp:3321: 2022-11-22T19:06:31,346 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-11-22T19:06:31,347 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-11-22T19:06:31,347 426 | vector<_Tp, _Alloc>:: 2022-11-22T19:06:31,347 | ^~~~~~~~~~~~~~~~~~~ 2022-11-22T19:06:31,388 In file included from /usr/include/c++/10/vector:67, 2022-11-22T19:06:31,388 from topology_wrap.cpp:3321: 2022-11-22T19:06:31,388 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_push_back(PyObject*, PyObject*)’: 2022-11-22T19:06:31,388 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:31,388 1198 | _M_realloc_insert(end(), __x); 2022-11-22T19:06:31,388 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T19:06:31,465 /usr/include/c++/10/bits/stl_vector.h: In function ‘Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]’: 2022-11-22T19:06:31,465 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:31,465 1198 | _M_realloc_insert(end(), __x); 2022-11-22T19:06:31,465 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T19:06:31,465 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:31,466 1198 | _M_realloc_insert(end(), __x); 2022-11-22T19:06:31,466 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T19:06:31,466 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:31,550 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_append(PyObject*, PyObject*)’: 2022-11-22T19:06:31,550 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:31,550 1198 | _M_realloc_insert(end(), __x); 2022-11-22T19:06:31,550 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-11-22T19:06:31,624 In file included from /usr/include/c++/10/vector:72, 2022-11-22T19:06:31,625 from topology_wrap.cpp:3321: 2022-11-22T19:06:31,625 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2022-11-22T19:06:31,625 /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-11-22T19:06:31,625 509 | vector<_Tp, _Alloc>:: 2022-11-22T19:06:31,625 | ^~~~~~~~~~~~~~~~~~~ 2022-11-22T19:06:38,254 /usr/include/c++/10/bits/vector.tcc: In function ‘PyObject* _wrap_vectorDouble_insert(PyObject*, PyObject*)’: 2022-11-22T19:06:38,254 /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:38,255 161 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2022-11-22T19:06:38,255 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:06:38,255 In file included from /usr/include/c++/10/vector:67, 2022-11-22T19:06:38,256 from topology_wrap.cpp:3321: 2022-11-22T19:06:38,256 /usr/include/c++/10/bits/stl_vector.h:1338:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:38,256 1338 | _M_fill_insert(begin() + __offset, __n, __x); 2022-11-22T19:06:38,256 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:06:38,412 /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_resize(PyObject*, PyObject*)’: 2022-11-22T19:06:38,413 /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2022-11-22T19:06:38,413 960 | _M_fill_insert(end(), __new_size - size(), __x); 2022-11-22T19:06:38,413 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-11-22T19:07:00,819 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c utils.cpp -o build/temp.linux-armv7l-cpython-39/utils.o -O3 2022-11-22T19:07:02,112 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/MergeTree.o build/temp.linux-armv7l-cpython-39/MorseComplex.o build/temp.linux-armv7l-cpython-39/UnionFind.o build/temp.linux-armv7l-cpython-39/topology_wrap.o build/temp.linux-armv7l-cpython-39/utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/topopy/_topology.cpython-39-arm-linux-gnueabihf.so 2022-11-22T19:07:03,276 installing to build/bdist.linux-armv7l/wheel 2022-11-22T19:07:03,276 running install 2022-11-22T19:07:03,302 running install_lib 2022-11-22T19:07:03,308 creating build/bdist.linux-armv7l 2022-11-22T19:07:03,309 creating build/bdist.linux-armv7l/wheel 2022-11-22T19:07:03,311 creating build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,312 copying build/lib.linux-armv7l-cpython-39/topopy/_topology.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,530 copying build/lib.linux-armv7l-cpython-39/topopy/topology.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,533 copying build/lib.linux-armv7l-cpython-39/topopy/ContourTree.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,536 copying build/lib.linux-armv7l-cpython-39/topopy/MergeTree.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,539 creating build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,540 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_mc.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,543 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_ct.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,545 copying build/lib.linux-armv7l-cpython-39/topopy/tests/msc_gold.json -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,549 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_msc.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,552 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_to.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,554 copying build/lib.linux-armv7l-cpython-39/topopy/tests/__init__.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,556 copying build/lib.linux-armv7l-cpython-39/topopy/tests/mc_gold.json -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,558 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_functions.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,561 copying build/lib.linux-armv7l-cpython-39/topopy/tests/test_mt.py -> build/bdist.linux-armv7l/wheel/topopy/tests 2022-11-22T19:07:03,563 copying build/lib.linux-armv7l-cpython-39/topopy/MorseSmaleComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,565 copying build/lib.linux-armv7l-cpython-39/topopy/MorseComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,568 copying build/lib.linux-armv7l-cpython-39/topopy/__init__.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,570 copying build/lib.linux-armv7l-cpython-39/topopy/TopologicalObject.py -> build/bdist.linux-armv7l/wheel/topopy 2022-11-22T19:07:03,572 running install_egg_info 2022-11-22T19:07:03,578 Copying topopy.egg-info to build/bdist.linux-armv7l/wheel/topopy-1.0.4-py3.9.egg-info 2022-11-22T19:07:03,590 running install_scripts 2022-11-22T19:07:03,644 creating build/bdist.linux-armv7l/wheel/topopy-1.0.4.dist-info/WHEEL 2022-11-22T19:07:03,647 creating '/tmp/pip-wheel-wjo8_6lx/tmp7u7hepqg/topopy-1.0.4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-22T19:07:03,651 adding 'topopy/ContourTree.py' 2022-11-22T19:07:03,653 adding 'topopy/MergeTree.py' 2022-11-22T19:07:03,655 adding 'topopy/MorseComplex.py' 2022-11-22T19:07:03,658 adding 'topopy/MorseSmaleComplex.py' 2022-11-22T19:07:03,660 adding 'topopy/TopologicalObject.py' 2022-11-22T19:07:03,662 adding 'topopy/__init__.py' 2022-11-22T19:07:05,148 adding 'topopy/_topology.cpython-39-arm-linux-gnueabihf.so' 2022-11-22T19:07:05,212 adding 'topopy/topology.py' 2022-11-22T19:07:05,215 adding 'topopy/tests/__init__.py' 2022-11-22T19:07:05,216 adding 'topopy/tests/mc_gold.json' 2022-11-22T19:07:05,219 adding 'topopy/tests/msc_gold.json' 2022-11-22T19:07:05,221 adding 'topopy/tests/test_ct.py' 2022-11-22T19:07:05,223 adding 'topopy/tests/test_functions.py' 2022-11-22T19:07:05,225 adding 'topopy/tests/test_mc.py' 2022-11-22T19:07:05,228 adding 'topopy/tests/test_msc.py' 2022-11-22T19:07:05,229 adding 'topopy/tests/test_mt.py' 2022-11-22T19:07:05,231 adding 'topopy/tests/test_to.py' 2022-11-22T19:07:05,234 adding 'topopy-1.0.4.dist-info/LICENSE' 2022-11-22T19:07:05,235 adding 'topopy-1.0.4.dist-info/METADATA' 2022-11-22T19:07:05,236 adding 'topopy-1.0.4.dist-info/WHEEL' 2022-11-22T19:07:05,237 adding 'topopy-1.0.4.dist-info/top_level.txt' 2022-11-22T19:07:05,238 adding 'topopy-1.0.4.dist-info/RECORD' 2022-11-22T19:07:05,281 removing build/bdist.linux-armv7l/wheel 2022-11-22T19:07:05,479 Building wheel for topopy (pyproject.toml): finished with status 'done' 2022-11-22T19:07:05,552 Created wheel for topopy: filename=topopy-1.0.4-cp39-cp39-linux_armv7l.whl size=3049258 sha256=1079ae2d7cea8eb571946dfce06fe743b02b0d8ce57f0c45cba811961b765a72 2022-11-22T19:07:05,553 Stored in directory: /tmp/pip-ephem-wheel-cache-4hpcw76d/wheels/41/9b/ca/d145ad0002c406947d16f0426be41f13396d407c102e56c680 2022-11-22T19:07:05,567 Successfully built topopy 2022-11-22T19:07:05,656 Removed build tracker: '/tmp/pip-build-tracker-o98ago50'