2022-11-25T05:40:56,936 Created temporary directory: /tmp/pip-ephem-wheel-cache-8coh4l9i 2022-11-25T05:40:56,940 Created temporary directory: /tmp/pip-build-tracker-jtzf6teg 2022-11-25T05:40:56,941 Initialized build tracking at /tmp/pip-build-tracker-jtzf6teg 2022-11-25T05:40:56,941 Created build tracker: /tmp/pip-build-tracker-jtzf6teg 2022-11-25T05:40:56,941 Entered build tracker: /tmp/pip-build-tracker-jtzf6teg 2022-11-25T05:40:56,943 Created temporary directory: /tmp/pip-wheel-ihwl3pn7 2022-11-25T05:40:56,950 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-25T05:40:56,956 Created temporary directory: /tmp/pip-ephem-wheel-cache-b1gstt_q 2022-11-25T05:40:57,007 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-25T05:40:57,013 2 location(s) to search for versions of metacoag: 2022-11-25T05:40:57,013 * https://pypi.org/simple/metacoag/ 2022-11-25T05:40:57,013 * https://www.piwheels.org/simple/metacoag/ 2022-11-25T05:40:57,014 Fetching project page and analyzing links: https://pypi.org/simple/metacoag/ 2022-11-25T05:40:57,016 Getting page https://pypi.org/simple/metacoag/ 2022-11-25T05:40:57,019 Found index url https://pypi.org/simple 2022-11-25T05:40:57,201 Fetched page https://pypi.org/simple/metacoag/ as application/vnd.pypi.simple.v1+json 2022-11-25T05:40:57,204 Found link https://files.pythonhosted.org/packages/53/61/499797173de25b20da47625a6a422e11a90f0a0799994d4bae1caaaab63e/metacoag-1.1.0.tar.gz (from https://pypi.org/simple/metacoag/) (requires-python:>=3.7), version: 1.1.0 2022-11-25T05:40:57,205 Fetching project page and analyzing links: https://www.piwheels.org/simple/metacoag/ 2022-11-25T05:40:57,206 Getting page https://www.piwheels.org/simple/metacoag/ 2022-11-25T05:40:57,208 Found index url https://www.piwheels.org/simple 2022-11-25T05:40:57,439 Fetched page https://www.piwheels.org/simple/metacoag/ as text/html 2022-11-25T05:40:57,441 Skipping link: not a file: https://www.piwheels.org/simple/metacoag/ 2022-11-25T05:40:57,442 Skipping link: not a file: https://pypi.org/simple/metacoag/ 2022-11-25T05:40:57,473 Given no hashes to check 1 links for project 'metacoag': discarding no candidates 2022-11-25T05:40:57,503 Collecting metacoag==1.1.0 2022-11-25T05:40:57,508 Created temporary directory: /tmp/pip-unpack-m9dggpmm 2022-11-25T05:40:58,405 Downloading metacoag-1.1.0.tar.gz (2.9 MB) 2022-11-25T05:41:00,710 Added metacoag==1.1.0 from https://files.pythonhosted.org/packages/53/61/499797173de25b20da47625a6a422e11a90f0a0799994d4bae1caaaab63e/metacoag-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-jtzf6teg' 2022-11-25T05:41:00,714 Running setup.py (path:/tmp/pip-wheel-ihwl3pn7/metacoag_f856aa8758c14a9aa30c72074a3ba82d/setup.py) egg_info for package metacoag 2022-11-25T05:41:00,715 Created temporary directory: /tmp/pip-pip-egg-info-al6a_ej3 2022-11-25T05:41:00,716 Preparing metadata (setup.py): started 2022-11-25T05:41:00,718 Running command python setup.py egg_info 2022-11-25T05:41:03,504 running egg_info 2022-11-25T05:41:03,511 creating /tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info 2022-11-25T05:41:03,596 writing /tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/PKG-INFO 2022-11-25T05:41:03,603 writing dependency_links to /tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/dependency_links.txt 2022-11-25T05:41:03,607 writing requirements to /tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/requires.txt 2022-11-25T05:41:03,609 writing top-level names to /tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/top_level.txt 2022-11-25T05:41:03,611 writing manifest file '/tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/SOURCES.txt' 2022-11-25T05:41:03,963 reading manifest file '/tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/SOURCES.txt' 2022-11-25T05:41:03,967 reading manifest template 'MANIFEST.in' 2022-11-25T05:41:03,982 warning: no previously-included files matching 'metacoag_utils/' found anywhere in distribution 2022-11-25T05:41:03,983 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-11-25T05:41:03,985 warning: no previously-included files matching 'metacoag_utils/__pycache__' found anywhere in distribution 2022-11-25T05:41:03,985 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-11-25T05:41:03,986 adding license file 'LICENSE' 2022-11-25T05:41:03,991 writing manifest file '/tmp/pip-pip-egg-info-al6a_ej3/metacoag.egg-info/SOURCES.txt' 2022-11-25T05:41:04,197 Preparing metadata (setup.py): finished with status 'done' 2022-11-25T05:41:04,211 Source in /tmp/pip-wheel-ihwl3pn7/metacoag_f856aa8758c14a9aa30c72074a3ba82d has version 1.1.0, which satisfies requirement metacoag==1.1.0 from https://files.pythonhosted.org/packages/53/61/499797173de25b20da47625a6a422e11a90f0a0799994d4bae1caaaab63e/metacoag-1.1.0.tar.gz 2022-11-25T05:41:04,213 Removed metacoag==1.1.0 from https://files.pythonhosted.org/packages/53/61/499797173de25b20da47625a6a422e11a90f0a0799994d4bae1caaaab63e/metacoag-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-jtzf6teg' 2022-11-25T05:41:04,229 Created temporary directory: /tmp/pip-unpack-kpr3nhvs 2022-11-25T05:41:04,230 Building wheels for collected packages: metacoag 2022-11-25T05:41:04,239 Created temporary directory: /tmp/pip-wheel-uw0bdy83 2022-11-25T05:41:04,240 Building wheel for metacoag (setup.py): started 2022-11-25T05:41:04,242 Destination directory: /tmp/pip-wheel-uw0bdy83 2022-11-25T05:41:04,242 Running command python setup.py bdist_wheel 2022-11-25T05:41:07,084 running bdist_wheel 2022-11-25T05:41:07,921 running build 2022-11-25T05:41:07,921 running build_py 2022-11-25T05:41:08,016 creating build 2022-11-25T05:41:08,017 creating build/lib 2022-11-25T05:41:08,018 creating build/lib/metacoag_utils 2022-11-25T05:41:08,021 copying metacoag_utils/label_prop_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,026 copying metacoag_utils/matching_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,031 copying metacoag_utils/bidirectionalmap.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,035 copying metacoag_utils/file_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,040 copying metacoag_utils/__init__.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,042 copying metacoag_utils/graph_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,047 copying metacoag_utils/feature_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,051 copying metacoag_utils/marker_gene_utils.py -> build/lib/metacoag_utils 2022-11-25T05:41:08,055 running egg_info 2022-11-25T05:41:08,296 writing metacoag.egg-info/PKG-INFO 2022-11-25T05:41:08,301 writing dependency_links to metacoag.egg-info/dependency_links.txt 2022-11-25T05:41:08,305 writing requirements to metacoag.egg-info/requires.txt 2022-11-25T05:41:08,307 writing top-level names to metacoag.egg-info/top_level.txt 2022-11-25T05:41:08,398 reading manifest file 'metacoag.egg-info/SOURCES.txt' 2022-11-25T05:41:08,402 reading manifest template 'MANIFEST.in' 2022-11-25T05:41:08,418 warning: no previously-included files matching 'metacoag_utils/' found anywhere in distribution 2022-11-25T05:41:08,419 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-11-25T05:41:08,420 warning: no previously-included files matching 'metacoag_utils/__pycache__' found anywhere in distribution 2022-11-25T05:41:08,421 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-11-25T05:41:08,421 adding license file 'LICENSE' 2022-11-25T05:41:08,427 writing manifest file 'metacoag.egg-info/SOURCES.txt' 2022-11-25T05:41:08,432 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'metacoag_utils.auxiliary' as data is deprecated, please list it in `packages`. 2022-11-25T05:41:08,433 !! 2022-11-25T05:41:08,434 ############################ 2022-11-25T05:41:08,434 # Package would be ignored # 2022-11-25T05:41:08,435 ############################ 2022-11-25T05:41:08,435 Python recognizes 'metacoag_utils.auxiliary' as an importable package, 2022-11-25T05:41:08,436 but it is not listed in the `packages` configuration of setuptools. 2022-11-25T05:41:08,437 'metacoag_utils.auxiliary' has been automatically added to the distribution only 2022-11-25T05:41:08,437 because it may contain data files, but this behavior is likely to change 2022-11-25T05:41:08,437 in future versions of setuptools (and therefore is considered deprecated). 2022-11-25T05:41:08,438 Please make sure that 'metacoag_utils.auxiliary' is included as a package by using 2022-11-25T05:41:08,438 the `packages` configuration field or the proper discovery methods 2022-11-25T05:41:08,438 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-11-25T05:41:08,439 instead of `find_packages(...)`/`find:`). 2022-11-25T05:41:08,439 You can read more about "package discovery" and "data files" on setuptools 2022-11-25T05:41:08,440 documentation page. 2022-11-25T05:41:08,441 !! 2022-11-25T05:41:08,441 check.warn(importable) 2022-11-25T05:41:08,441 creating build/lib/metacoag_utils/auxiliary 2022-11-25T05:41:08,442 copying metacoag_utils/auxiliary/marker.hmm -> build/lib/metacoag_utils/auxiliary 2022-11-25T05:41:09,019 running build_scripts 2022-11-25T05:41:09,020 creating build/scripts-3.7 2022-11-25T05:41:09,022 copying and adjusting metacoag -> build/scripts-3.7 2022-11-25T05:41:09,029 changing mode of build/scripts-3.7/metacoag from 644 to 755 2022-11-25T05:41:09,122 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-25T05:41:09,122 setuptools.SetuptoolsDeprecationWarning, 2022-11-25T05:41:09,208 installing to build/bdist.linux-armv7l/wheel 2022-11-25T05:41:09,209 running install 2022-11-25T05:41:09,270 running install_lib 2022-11-25T05:41:09,360 creating build/bdist.linux-armv7l 2022-11-25T05:41:09,360 creating build/bdist.linux-armv7l/wheel 2022-11-25T05:41:09,364 creating build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:09,367 creating build/bdist.linux-armv7l/wheel/metacoag_utils/auxiliary 2022-11-25T05:41:09,369 copying build/lib/metacoag_utils/auxiliary/marker.hmm -> build/bdist.linux-armv7l/wheel/metacoag_utils/auxiliary 2022-11-25T05:41:09,981 copying build/lib/metacoag_utils/label_prop_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:09,986 copying build/lib/metacoag_utils/matching_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:09,990 copying build/lib/metacoag_utils/bidirectionalmap.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:09,993 copying build/lib/metacoag_utils/file_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:09,997 copying build/lib/metacoag_utils/__init__.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:10,000 copying build/lib/metacoag_utils/graph_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:10,003 copying build/lib/metacoag_utils/feature_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:10,007 copying build/lib/metacoag_utils/marker_gene_utils.py -> build/bdist.linux-armv7l/wheel/metacoag_utils 2022-11-25T05:41:10,011 running install_data 2022-11-25T05:41:10,094 creating build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data 2022-11-25T05:41:10,095 creating build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/data 2022-11-25T05:41:10,097 copying LICENSE -> build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/data/. 2022-11-25T05:41:10,103 copying README.md -> build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/data/. 2022-11-25T05:41:10,106 running install_egg_info 2022-11-25T05:41:10,201 Copying metacoag.egg-info to build/bdist.linux-armv7l/wheel/metacoag-1.1.0-py3.7.egg-info 2022-11-25T05:41:10,224 running install_scripts 2022-11-25T05:41:10,337 creating build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/scripts 2022-11-25T05:41:10,339 copying build/scripts-3.7/metacoag -> build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/scripts 2022-11-25T05:41:10,344 changing mode of build/bdist.linux-armv7l/wheel/metacoag-1.1.0.data/scripts/metacoag to 755 2022-11-25T05:41:10,397 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-25T05:41:10,408 creating build/bdist.linux-armv7l/wheel/metacoag-1.1.0.dist-info/WHEEL 2022-11-25T05:41:10,412 creating '/tmp/pip-wheel-uw0bdy83/metacoag-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-25T05:41:10,430 adding 'metacoag-1.1.0.data/data/LICENSE' 2022-11-25T05:41:10,434 adding 'metacoag-1.1.0.data/data/README.md' 2022-11-25T05:41:10,444 adding 'metacoag-1.1.0.data/scripts/metacoag' 2022-11-25T05:41:10,451 adding 'metacoag_utils/__init__.py' 2022-11-25T05:41:10,453 adding 'metacoag_utils/bidirectionalmap.py' 2022-11-25T05:41:10,456 adding 'metacoag_utils/feature_utils.py' 2022-11-25T05:41:10,460 adding 'metacoag_utils/file_utils.py' 2022-11-25T05:41:10,463 adding 'metacoag_utils/graph_utils.py' 2022-11-25T05:41:10,467 adding 'metacoag_utils/label_prop_utils.py' 2022-11-25T05:41:10,471 adding 'metacoag_utils/marker_gene_utils.py' 2022-11-25T05:41:10,475 adding 'metacoag_utils/matching_utils.py' 2022-11-25T05:41:16,784 adding 'metacoag_utils/auxiliary/marker.hmm' 2022-11-25T05:41:17,116 adding 'metacoag-1.1.0.dist-info/LICENSE' 2022-11-25T05:41:17,120 adding 'metacoag-1.1.0.dist-info/METADATA' 2022-11-25T05:41:17,122 adding 'metacoag-1.1.0.dist-info/WHEEL' 2022-11-25T05:41:17,124 adding 'metacoag-1.1.0.dist-info/top_level.txt' 2022-11-25T05:41:17,125 adding 'metacoag-1.1.0.dist-info/zip-safe' 2022-11-25T05:41:17,127 adding 'metacoag-1.1.0.dist-info/RECORD' 2022-11-25T05:41:17,244 removing build/bdist.linux-armv7l/wheel 2022-11-25T05:41:17,519 Building wheel for metacoag (setup.py): finished with status 'done' 2022-11-25T05:41:17,613 Created wheel for metacoag: filename=metacoag-1.1.0-py3-none-any.whl size=2958214 sha256=c782e94b7e63de3bd31f4715a4eb6d1c108cbaba659876fcf16c844e3c71b216 2022-11-25T05:41:17,615 Stored in directory: /tmp/pip-ephem-wheel-cache-b1gstt_q/wheels/95/c8/ce/15d31a7898d42ed1d986e6a595b87515790c3c8748ee80bd82 2022-11-25T05:41:17,649 Successfully built metacoag 2022-11-25T05:41:17,875 Removed build tracker: '/tmp/pip-build-tracker-jtzf6teg'