2022-11-29T18:36:00,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-uiskwdl0
2022-11-29T18:36:00,988 Created temporary directory: /tmp/pip-build-tracker-hsoxmzd2
2022-11-29T18:36:00,989 Initialized build tracking at /tmp/pip-build-tracker-hsoxmzd2
2022-11-29T18:36:00,989 Created build tracker: /tmp/pip-build-tracker-hsoxmzd2
2022-11-29T18:36:00,989 Entered build tracker: /tmp/pip-build-tracker-hsoxmzd2
2022-11-29T18:36:00,991 Created temporary directory: /tmp/pip-wheel-vdygjl0q
2022-11-29T18:36:00,998 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-29T18:36:01,003 Created temporary directory: /tmp/pip-ephem-wheel-cache-3r73qt48
2022-11-29T18:36:01,058 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-29T18:36:01,065 2 location(s) to search for versions of ingenannot:
2022-11-29T18:36:01,065 * https://pypi.org/simple/ingenannot/
2022-11-29T18:36:01,065 * https://www.piwheels.org/simple/ingenannot/
2022-11-29T18:36:01,066 Fetching project page and analyzing links: https://pypi.org/simple/ingenannot/
2022-11-29T18:36:01,067 Getting page https://pypi.org/simple/ingenannot/
2022-11-29T18:36:01,071 Found index url https://pypi.org/simple
2022-11-29T18:36:01,299 Fetched page https://pypi.org/simple/ingenannot/ as application/vnd.pypi.simple.v1+json
2022-11-29T18:36:01,304   Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/e5/5a/a63723108529ebf74f973a9b88c544dc1b2f5ba185f6a2c36960b2247c3c/ingenannot-0.0-py3-none-any.whl (from https://pypi.org/simple/ingenannot/)
2022-11-29T18:36:01,305   Found link https://files.pythonhosted.org/packages/6c/f0/23e4b467f41f86c6b579bfda21c20bd48070821bae4482870894065d28e6/ingenannot-0.0.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0
2022-11-29T18:36:01,306   Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/eb/c6/38e555c4aaec4eb3b20d5c5f16920f7bcaa8440cfc045bc9f78adfc20813/ingenannot-0.0.3-py3-none-any.whl (from https://pypi.org/simple/ingenannot/)
2022-11-29T18:36:01,307   Found link https://files.pythonhosted.org/packages/9d/3d/0932d95ca9e2fdfd1c48b35e7c0f1f44440d13004c6eb14a6db65bf9ce74/ingenannot-0.0.3.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.3
2022-11-29T18:36:01,307   Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/18/94/b7c407407ca97bb20891e1ff05138c0fe849a125521616412499bc56d494/ingenannot-0.0.4-py3-none-any.whl (from https://pypi.org/simple/ingenannot/)
2022-11-29T18:36:01,308   Found link https://files.pythonhosted.org/packages/b9/fe/ff67846ef01a8a3972c2e6ff90f2846108d578a8115e4889aadd24e1b64d/ingenannot-0.0.4.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.4
2022-11-29T18:36:01,309   Skipping link: No binaries permitted for ingenannot: https://files.pythonhosted.org/packages/77/2b/44c2fa6e5007c01fb78b6912b7f2cd713f2ae04e061fc933a7769b73300f/ingenannot-0.0.5-py3-none-any.whl (from https://pypi.org/simple/ingenannot/)
2022-11-29T18:36:01,309   Found link https://files.pythonhosted.org/packages/86/59/a3523a25ba366cb0be9b7fe9bc8423e558a4ee41284a4635b115fc9ec2a5/ingenannot-0.0.5.tar.gz (from https://pypi.org/simple/ingenannot/), version: 0.0.5
2022-11-29T18:36:01,310 Fetching project page and analyzing links: https://www.piwheels.org/simple/ingenannot/
2022-11-29T18:36:01,311 Getting page https://www.piwheels.org/simple/ingenannot/
2022-11-29T18:36:01,313 Found index url https://www.piwheels.org/simple
2022-11-29T18:36:06,905 Fetched page https://www.piwheels.org/simple/ingenannot/ as text/html
2022-11-29T18:36:06,909   Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.4-py3-none-any.whl#sha256=b06dc4cffc745860f8bba87cf14f1dd80094e6975842c5c6d49215d85a5b4176 (from https://www.piwheels.org/simple/ingenannot/)
2022-11-29T18:36:06,910   Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0.3-py3-none-any.whl#sha256=317988df109d148ad2e15fcb6cc87d4f986546ec1fa5da337be4c34f3e1097f2 (from https://www.piwheels.org/simple/ingenannot/)
2022-11-29T18:36:06,910   Skipping link: No binaries permitted for ingenannot: https://www.piwheels.org/simple/ingenannot/ingenannot-0.0-py3-none-any.whl#sha256=a8ebdf5bd0735d68320569b0c02c4430d2a8179e94444468a3340fe836c19db6 (from https://www.piwheels.org/simple/ingenannot/)
2022-11-29T18:36:06,911 Skipping link: not a file: https://www.piwheels.org/simple/ingenannot/
2022-11-29T18:36:06,911 Skipping link: not a file: https://pypi.org/simple/ingenannot/
2022-11-29T18:36:06,944 Given no hashes to check 1 links for project 'ingenannot': discarding no candidates
2022-11-29T18:36:06,978 Collecting ingenannot==0.0.5
2022-11-29T18:36:06,983   Created temporary directory: /tmp/pip-unpack-3dfw9sun
2022-11-29T18:36:07,351   Downloading ingenannot-0.0.5.tar.gz (83 kB)
2022-11-29T18:36:07,674   Added ingenannot==0.0.5 from https://files.pythonhosted.org/packages/86/59/a3523a25ba366cb0be9b7fe9bc8423e558a4ee41284a4635b115fc9ec2a5/ingenannot-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-hsoxmzd2'
2022-11-29T18:36:07,678   Running setup.py (path:/tmp/pip-wheel-vdygjl0q/ingenannot_081f7082142b412a863bd85cbe40bdef/setup.py) egg_info for package ingenannot
2022-11-29T18:36:07,680   Created temporary directory: /tmp/pip-pip-egg-info-90klqhz9
2022-11-29T18:36:07,681   Preparing metadata (setup.py): started
2022-11-29T18:36:07,683   Running command python setup.py egg_info
2022-11-29T18:36:10,142   running egg_info
2022-11-29T18:36:10,150   creating /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info
2022-11-29T18:36:10,212   writing /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/PKG-INFO
2022-11-29T18:36:10,218   writing dependency_links to /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/dependency_links.txt
2022-11-29T18:36:10,222   writing entry points to /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/entry_points.txt
2022-11-29T18:36:10,224   writing requirements to /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/requires.txt
2022-11-29T18:36:10,226   writing top-level names to /tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/top_level.txt
2022-11-29T18:36:10,229   writing manifest file '/tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/SOURCES.txt'
2022-11-29T18:36:10,434   reading manifest file '/tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/SOURCES.txt'
2022-11-29T18:36:10,437   adding license file 'LICENSE'
2022-11-29T18:36:10,445   writing manifest file '/tmp/pip-pip-egg-info-90klqhz9/ingenannot.egg-info/SOURCES.txt'
2022-11-29T18:36:10,608   Preparing metadata (setup.py): finished with status 'done'
2022-11-29T18:36:10,622   Source in /tmp/pip-wheel-vdygjl0q/ingenannot_081f7082142b412a863bd85cbe40bdef has version 0.0.5, which satisfies requirement ingenannot==0.0.5 from https://files.pythonhosted.org/packages/86/59/a3523a25ba366cb0be9b7fe9bc8423e558a4ee41284a4635b115fc9ec2a5/ingenannot-0.0.5.tar.gz
2022-11-29T18:36:10,624   Removed ingenannot==0.0.5 from https://files.pythonhosted.org/packages/86/59/a3523a25ba366cb0be9b7fe9bc8423e558a4ee41284a4635b115fc9ec2a5/ingenannot-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-hsoxmzd2'
2022-11-29T18:36:10,635 Created temporary directory: /tmp/pip-unpack-idxr_cnn
2022-11-29T18:36:10,636 Building wheels for collected packages: ingenannot
2022-11-29T18:36:10,645   Created temporary directory: /tmp/pip-wheel-j2su6d3g
2022-11-29T18:36:10,646   Building wheel for ingenannot (setup.py): started
2022-11-29T18:36:10,648   Destination directory: /tmp/pip-wheel-j2su6d3g
2022-11-29T18:36:10,648   Running command python setup.py bdist_wheel
2022-11-29T18:36:13,092   running bdist_wheel
2022-11-29T18:36:13,849   running build
2022-11-29T18:36:13,849   running build_py
2022-11-29T18:36:13,919   creating build
2022-11-29T18:36:13,919   creating build/lib
2022-11-29T18:36:13,920   creating build/lib/ingenannot
2022-11-29T18:36:13,922   copying ingenannot/version.py -> build/lib/ingenannot
2022-11-29T18:36:13,926   copying ingenannot/__init__.py -> build/lib/ingenannot
2022-11-29T18:36:13,929   copying ingenannot/main.py -> build/lib/ingenannot
2022-11-29T18:36:13,938   creating build/lib/ingenannot/commands
2022-11-29T18:36:13,940   copying ingenannot/commands/rescue_effectors.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,945   copying ingenannot/commands/SupportIsoformFilter.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,950   copying ingenannot/commands/clusterize.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,953   copying ingenannot/commands/reduce.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,958   copying ingenannot/commands/compare.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,963   copying ingenannot/commands/__init__.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,966   copying ingenannot/commands/filter.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,970   copying ingenannot/commands/add_sqanti3_isoforms.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,974   copying ingenannot/commands/AddIsoforms.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,981   copying ingenannot/commands/StringtieFilter.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,984   copying ingenannot/commands/StringtieStats.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,989   copying ingenannot/commands/effector_predictor_cmd.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,992   copying ingenannot/commands/StringtieRefine.py -> build/lib/ingenannot/commands
2022-11-29T18:36:13,996   copying ingenannot/commands/select.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,001   copying ingenannot/commands/isoform_ranking.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,008   copying ingenannot/commands/aed.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,012   copying ingenannot/commands/validate.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,016   copying ingenannot/commands/utr_refine.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,020   copying ingenannot/commands/so_classification.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,023   copying ingenannot/commands/strand_annotation_filter.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,027   copying ingenannot/commands/rename.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,031   copying ingenannot/commands/aed_compare.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,035   copying ingenannot/commands/StringtieJaclip.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,039   copying ingenannot/commands/exonerate_to_gff.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,043   copying ingenannot/commands/command.py -> build/lib/ingenannot/commands
2022-11-29T18:36:14,048   creating build/lib/ingenannot/entities
2022-11-29T18:36:14,049   copying ingenannot/entities/intron.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,053   copying ingenannot/entities/__init__.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,055   copying ingenannot/entities/cds.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,059   copying ingenannot/entities/transcript.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,072   copying ingenannot/entities/gene.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,076   copying ingenannot/entities/metagene.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,080   copying ingenannot/entities/cluster.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,084   copying ingenannot/entities/exon.py -> build/lib/ingenannot/entities
2022-11-29T18:36:14,089   creating build/lib/ingenannot/utils
2022-11-29T18:36:14,091   copying ingenannot/utils/annot_edit_distance.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,096   copying ingenannot/utils/em_operators.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,099   copying ingenannot/utils/graphics.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,103   copying ingenannot/utils/__init__.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,109   copying ingenannot/utils/tool_checker.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,113   copying ingenannot/utils/gene_builder.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,117   copying ingenannot/utils/gff_reader.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,122   copying ingenannot/utils/so_splicing_classifier.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,125   copying ingenannot/utils/effector_predictor.py -> build/lib/ingenannot/utils
2022-11-29T18:36:14,210   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-29T18:36:14,211     setuptools.SetuptoolsDeprecationWarning,
2022-11-29T18:36:14,274   installing to build/bdist.linux-armv7l/wheel
2022-11-29T18:36:14,275   running install
2022-11-29T18:36:14,336   running install_lib
2022-11-29T18:36:14,404   creating build/bdist.linux-armv7l
2022-11-29T18:36:14,404   creating build/bdist.linux-armv7l/wheel
2022-11-29T18:36:14,408   creating build/bdist.linux-armv7l/wheel/ingenannot
2022-11-29T18:36:14,410   copying build/lib/ingenannot/version.py -> build/bdist.linux-armv7l/wheel/ingenannot
2022-11-29T18:36:14,416   creating build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,417   copying build/lib/ingenannot/commands/rescue_effectors.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,423   copying build/lib/ingenannot/commands/SupportIsoformFilter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,428   copying build/lib/ingenannot/commands/clusterize.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,432   copying build/lib/ingenannot/commands/reduce.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,437   copying build/lib/ingenannot/commands/compare.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,442   copying build/lib/ingenannot/commands/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,445   copying build/lib/ingenannot/commands/filter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,449   copying build/lib/ingenannot/commands/add_sqanti3_isoforms.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,454   copying build/lib/ingenannot/commands/AddIsoforms.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,459   copying build/lib/ingenannot/commands/StringtieFilter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,463   copying build/lib/ingenannot/commands/StringtieStats.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,468   copying build/lib/ingenannot/commands/effector_predictor_cmd.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,471   copying build/lib/ingenannot/commands/StringtieRefine.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,475   copying build/lib/ingenannot/commands/select.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,479   copying build/lib/ingenannot/commands/isoform_ranking.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,485   copying build/lib/ingenannot/commands/aed.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,489   copying build/lib/ingenannot/commands/validate.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,493   copying build/lib/ingenannot/commands/utr_refine.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,497   copying build/lib/ingenannot/commands/so_classification.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,500   copying build/lib/ingenannot/commands/strand_annotation_filter.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,504   copying build/lib/ingenannot/commands/rename.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,508   copying build/lib/ingenannot/commands/aed_compare.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,511   copying build/lib/ingenannot/commands/StringtieJaclip.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,516   copying build/lib/ingenannot/commands/exonerate_to_gff.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,520   copying build/lib/ingenannot/commands/command.py -> build/bdist.linux-armv7l/wheel/ingenannot/commands
2022-11-29T18:36:14,523   copying build/lib/ingenannot/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot
2022-11-29T18:36:14,527   creating build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,529   copying build/lib/ingenannot/entities/intron.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,533   copying build/lib/ingenannot/entities/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,535   copying build/lib/ingenannot/entities/cds.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,539   copying build/lib/ingenannot/entities/transcript.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,544   copying build/lib/ingenannot/entities/gene.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,548   copying build/lib/ingenannot/entities/metagene.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,552   copying build/lib/ingenannot/entities/cluster.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,555   copying build/lib/ingenannot/entities/exon.py -> build/bdist.linux-armv7l/wheel/ingenannot/entities
2022-11-29T18:36:14,559   copying build/lib/ingenannot/main.py -> build/bdist.linux-armv7l/wheel/ingenannot
2022-11-29T18:36:14,566   creating build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,567   copying build/lib/ingenannot/utils/annot_edit_distance.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,572   copying build/lib/ingenannot/utils/em_operators.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,575   copying build/lib/ingenannot/utils/graphics.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,579   copying build/lib/ingenannot/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,584   copying build/lib/ingenannot/utils/tool_checker.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,587   copying build/lib/ingenannot/utils/gene_builder.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,591   copying build/lib/ingenannot/utils/gff_reader.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,595   copying build/lib/ingenannot/utils/so_splicing_classifier.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,599   copying build/lib/ingenannot/utils/effector_predictor.py -> build/bdist.linux-armv7l/wheel/ingenannot/utils
2022-11-29T18:36:14,602   running install_egg_info
2022-11-29T18:36:14,806   running egg_info
2022-11-29T18:36:14,867   writing ingenannot.egg-info/PKG-INFO
2022-11-29T18:36:14,871   writing dependency_links to ingenannot.egg-info/dependency_links.txt
2022-11-29T18:36:14,875   writing entry points to ingenannot.egg-info/entry_points.txt
2022-11-29T18:36:14,878   writing requirements to ingenannot.egg-info/requires.txt
2022-11-29T18:36:14,880   writing top-level names to ingenannot.egg-info/top_level.txt
2022-11-29T18:36:14,955   reading manifest file 'ingenannot.egg-info/SOURCES.txt'
2022-11-29T18:36:14,962   adding license file 'LICENSE'
2022-11-29T18:36:14,972   writing manifest file 'ingenannot.egg-info/SOURCES.txt'
2022-11-29T18:36:14,974   Copying ingenannot.egg-info to build/bdist.linux-armv7l/wheel/ingenannot-0.0.5-py3.7.egg-info
2022-11-29T18:36:14,998   running install_scripts
2022-11-29T18:36:15,159   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-11-29T18:36:15,170   creating build/bdist.linux-armv7l/wheel/ingenannot-0.0.5.dist-info/WHEEL
2022-11-29T18:36:15,174   creating '/tmp/pip-wheel-j2su6d3g/ingenannot-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-29T18:36:15,179   adding 'ingenannot/__init__.py'
2022-11-29T18:36:15,186   adding 'ingenannot/main.py'
2022-11-29T18:36:15,189   adding 'ingenannot/version.py'
2022-11-29T18:36:15,199   adding 'ingenannot/commands/AddIsoforms.py'
2022-11-29T18:36:15,202   adding 'ingenannot/commands/StringtieFilter.py'
2022-11-29T18:36:15,205   adding 'ingenannot/commands/StringtieJaclip.py'
2022-11-29T18:36:15,207   adding 'ingenannot/commands/StringtieRefine.py'
2022-11-29T18:36:15,221   adding 'ingenannot/commands/StringtieStats.py'
2022-11-29T18:36:15,225   adding 'ingenannot/commands/SupportIsoformFilter.py'
2022-11-29T18:36:15,228   adding 'ingenannot/commands/__init__.py'
2022-11-29T18:36:15,231   adding 'ingenannot/commands/add_sqanti3_isoforms.py'
2022-11-29T18:36:15,234   adding 'ingenannot/commands/aed.py'
2022-11-29T18:36:15,236   adding 'ingenannot/commands/aed_compare.py'
2022-11-29T18:36:15,239   adding 'ingenannot/commands/clusterize.py'
2022-11-29T18:36:15,241   adding 'ingenannot/commands/command.py'
2022-11-29T18:36:15,245   adding 'ingenannot/commands/compare.py'
2022-11-29T18:36:15,248   adding 'ingenannot/commands/effector_predictor_cmd.py'
2022-11-29T18:36:15,251   adding 'ingenannot/commands/exonerate_to_gff.py'
2022-11-29T18:36:15,253   adding 'ingenannot/commands/filter.py'
2022-11-29T18:36:15,262   adding 'ingenannot/commands/isoform_ranking.py'
2022-11-29T18:36:15,267   adding 'ingenannot/commands/reduce.py'
2022-11-29T18:36:15,270   adding 'ingenannot/commands/rename.py'
2022-11-29T18:36:15,275   adding 'ingenannot/commands/rescue_effectors.py'
2022-11-29T18:36:15,280   adding 'ingenannot/commands/select.py'
2022-11-29T18:36:15,283   adding 'ingenannot/commands/so_classification.py'
2022-11-29T18:36:15,286   adding 'ingenannot/commands/strand_annotation_filter.py'
2022-11-29T18:36:15,290   adding 'ingenannot/commands/utr_refine.py'
2022-11-29T18:36:15,293   adding 'ingenannot/commands/validate.py'
2022-11-29T18:36:15,296   adding 'ingenannot/entities/__init__.py'
2022-11-29T18:36:15,299   adding 'ingenannot/entities/cds.py'
2022-11-29T18:36:15,302   adding 'ingenannot/entities/cluster.py'
2022-11-29T18:36:15,304   adding 'ingenannot/entities/exon.py'
2022-11-29T18:36:15,307   adding 'ingenannot/entities/gene.py'
2022-11-29T18:36:15,309   adding 'ingenannot/entities/intron.py'
2022-11-29T18:36:15,312   adding 'ingenannot/entities/metagene.py'
2022-11-29T18:36:15,317   adding 'ingenannot/entities/transcript.py'
2022-11-29T18:36:15,325   adding 'ingenannot/utils/__init__.py'
2022-11-29T18:36:15,329   adding 'ingenannot/utils/annot_edit_distance.py'
2022-11-29T18:36:15,333   adding 'ingenannot/utils/effector_predictor.py'
2022-11-29T18:36:15,336   adding 'ingenannot/utils/em_operators.py'
2022-11-29T18:36:15,341   adding 'ingenannot/utils/gene_builder.py'
2022-11-29T18:36:15,344   adding 'ingenannot/utils/gff_reader.py'
2022-11-29T18:36:15,348   adding 'ingenannot/utils/graphics.py'
2022-11-29T18:36:15,351   adding 'ingenannot/utils/so_splicing_classifier.py'
2022-11-29T18:36:15,353   adding 'ingenannot/utils/tool_checker.py'
2022-11-29T18:36:15,359   adding 'ingenannot-0.0.5.dist-info/LICENSE'
2022-11-29T18:36:15,363   adding 'ingenannot-0.0.5.dist-info/METADATA'
2022-11-29T18:36:15,365   adding 'ingenannot-0.0.5.dist-info/WHEEL'
2022-11-29T18:36:15,366   adding 'ingenannot-0.0.5.dist-info/entry_points.txt'
2022-11-29T18:36:15,368   adding 'ingenannot-0.0.5.dist-info/top_level.txt'
2022-11-29T18:36:15,371   adding 'ingenannot-0.0.5.dist-info/RECORD'
2022-11-29T18:36:15,377   removing build/bdist.linux-armv7l/wheel
2022-11-29T18:36:15,601   Building wheel for ingenannot (setup.py): finished with status 'done'
2022-11-29T18:36:15,611   Created wheel for ingenannot: filename=ingenannot-0.0.5-py3-none-any.whl size=98580 sha256=6f584e9288af2d0582b3aa93f86f78cc4e9dbca8b1efa8a6d018feb7596bd5f3
2022-11-29T18:36:15,613   Stored in directory: /tmp/pip-ephem-wheel-cache-3r73qt48/wheels/8b/2f/95/b41f51f1873405f1bf0b649dc2d81ff907c4f97cea37480487
2022-11-29T18:36:15,644 Successfully built ingenannot
2022-11-29T18:36:15,660 Removed build tracker: '/tmp/pip-build-tracker-hsoxmzd2'