2022-12-02T16:38:47,240 Created temporary directory: /tmp/pip-ephem-wheel-cache-fxv6ayz3 2022-12-02T16:38:47,245 Created temporary directory: /tmp/pip-build-tracker-r4t9d4dg 2022-12-02T16:38:47,246 Initialized build tracking at /tmp/pip-build-tracker-r4t9d4dg 2022-12-02T16:38:47,246 Created build tracker: /tmp/pip-build-tracker-r4t9d4dg 2022-12-02T16:38:47,246 Entered build tracker: /tmp/pip-build-tracker-r4t9d4dg 2022-12-02T16:38:47,247 Created temporary directory: /tmp/pip-wheel-_e531hu8 2022-12-02T16:38:47,255 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-02T16:38:47,260 Created temporary directory: /tmp/pip-ephem-wheel-cache-rbz8z_ga 2022-12-02T16:38:47,311 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-02T16:38:47,318 2 location(s) to search for versions of vermouth: 2022-12-02T16:38:47,318 * https://pypi.org/simple/vermouth/ 2022-12-02T16:38:47,318 * https://www.piwheels.org/simple/vermouth/ 2022-12-02T16:38:47,319 Fetching project page and analyzing links: https://pypi.org/simple/vermouth/ 2022-12-02T16:38:47,320 Getting page https://pypi.org/simple/vermouth/ 2022-12-02T16:38:47,323 Found index url https://pypi.org/simple 2022-12-02T16:38:47,548 Fetched page https://pypi.org/simple/vermouth/ as application/vnd.pypi.simple.v1+json 2022-12-02T16:38:47,559 Found link https://files.pythonhosted.org/packages/c6/b1/274b76764e2ebe0b190708befe8a588d5b645f096609f68723139c80fdee/vermouth-0.1.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.1.0 2022-12-02T16:38:47,560 Found link https://files.pythonhosted.org/packages/ee/d9/cc8ed35bf50924fa9bf4d450c620f6f0f45254b00b30c2fe1a7f76b00368/vermouth-0.2.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.2.0 2022-12-02T16:38:47,561 Found link https://files.pythonhosted.org/packages/c7/6b/bf90515318a6a1c4e2994db43469e52e638d16400068dfcb7d478e9b7c1a/vermouth-0.3.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.3.0 2022-12-02T16:38:47,562 Found link https://files.pythonhosted.org/packages/b2/d5/07402db0608b5e2bdfbf3f8858ccfd2f454f382f50e4a6940b763426cbea/vermouth-0.3.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.3.1 2022-12-02T16:38:47,563 Found link https://files.pythonhosted.org/packages/bf/6e/b4e991b3fe595aca6a31cc0449c66b240f50edbf12ebfe80f0d0e592cd5e/vermouth-0.4.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.4.0 2022-12-02T16:38:47,563 Found link https://files.pythonhosted.org/packages/2c/72/107e8be40ef06f07a809105debbfb1278aceaee8c363189b9c09fe44f8a2/vermouth-0.4.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.4.1 2022-12-02T16:38:47,564 Found link https://files.pythonhosted.org/packages/d2/86/6cc920072226d0a6e5c0e0a28f85414722b023c66c3cccaaf3492ded2cba/vermouth-0.5.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.5.0 2022-12-02T16:38:47,565 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/ee/ff/589eae88b25a30d0b086231b459f2927ede30c9ef57e92b84a4d479775f2/vermouth-0.6.0-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,565 Found link https://files.pythonhosted.org/packages/de/df/6ec1631c808589b3eb5dfbb8e22df2803fde0750c30e6305148f14d72256/vermouth-0.6.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.6.0 2022-12-02T16:38:47,566 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/de/1f/a29254c72edc7bc749c16f3bf621baa85c6883567469ebcc068b6771abb4/vermouth-0.6.1.dev1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,566 Found link https://files.pythonhosted.org/packages/f5/75/24a94d58fdd58770f2df5325d29034dbd0a072a0bd99905507a297dc3796/vermouth-0.6.1.dev1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.6.1.dev1 2022-12-02T16:38:47,567 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b8/87/07db5eba7bf97abf229dbf76ff759a877057bf94cffff0ded5909422d14a/vermouth-0.7.0-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,568 Found link https://files.pythonhosted.org/packages/94/1f/e6e57cdc03b6afb830671707bffbfccefd383b3efc9dbe086c1d9037c34d/vermouth-0.7.0.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.0 2022-12-02T16:38:47,569 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/18/d3/2998a0d56963a85358f7fe385adb3eb9d660c1ce771057008afd5cfd6901/vermouth-0.7.1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,569 Found link https://files.pythonhosted.org/packages/43/0b/d6cd081c035a321c1149cd8625fad98d969d6413327bbde731f4d30c5e4f/vermouth-0.7.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.1 2022-12-02T16:38:47,570 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b2/3a/cb877fe0c178bce0e16ddda0c34fd57902248b07938e3cb72bc1c78bc0d1/vermouth-0.7.2-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,570 Found link https://files.pythonhosted.org/packages/56/a1/1e5a5d54a4d1aed5d50645e5adc4ad026636c1e837d56adce10a54463ad6/vermouth-0.7.2.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.2 2022-12-02T16:38:47,571 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/b2/20/f41a35c1b011d730614adab6923c713a58b7731b28b6488e8190a009aec2/vermouth-0.7.3-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,572 Found link https://files.pythonhosted.org/packages/7d/78/12e0752ceab663c708253421692fbc1ee3b1184e1918e2fbc9b06f4f9097/vermouth-0.7.3.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.7.3 2022-12-02T16:38:47,572 Skipping link: No binaries permitted for vermouth: https://files.pythonhosted.org/packages/52/34/e7b82dc063e327fc8f47ab01d2b27363ebd3778e8f45d90ec8ad38486480/vermouth-0.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/vermouth/) 2022-12-02T16:38:47,573 Found link https://files.pythonhosted.org/packages/1a/49/4e20bde1dbaab255a469c7944c1e6a767e7449e1dd5b20e3f2524083d6eb/vermouth-0.8.1.tar.gz (from https://pypi.org/simple/vermouth/), version: 0.8.1 2022-12-02T16:38:47,574 Fetching project page and analyzing links: https://www.piwheels.org/simple/vermouth/ 2022-12-02T16:38:47,574 Getting page https://www.piwheels.org/simple/vermouth/ 2022-12-02T16:38:47,577 Found index url https://www.piwheels.org/simple 2022-12-02T16:38:47,812 Fetched page https://www.piwheels.org/simple/vermouth/ as text/html 2022-12-02T16:38:47,823 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.3-py2.py3-none-any.whl#sha256=a151dce5369142ce6d19a3988e0a1746288f8f2fae07ba59c5e1547df88ad1e3 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,824 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.2-py2.py3-none-any.whl#sha256=229f973ded59ef7883ba4f6fbfa96540cdf40b1b961b12efdbe7d5cb81fac6a1 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,825 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.1-py2.py3-none-any.whl#sha256=fc70883831d576793246091cafc7b008f187bc4faf6a8e560307ab7481e832f2 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,825 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.7.0-py2.py3-none-any.whl#sha256=5fca42314e68189e5e41f8e4b1722a1b93e3522c211a4504fa1e329991804768 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,826 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.6.1.dev1-py2.py3-none-any.whl#sha256=40b89874779133125b2ceda6a869dfaee2f00ebbeb4eab86903eb35cf0f51102 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,826 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.6.0-py2.py3-none-any.whl#sha256=eacf3828c494728c7a206f78e8b3845eed24ca2f25b522c618260811f03231fe (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,827 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.5.0-py2.py3-none-any.whl#sha256=d2dcb086df80653b9602029af7363d8ba15a3660a9eed6f9d5c62f3156f231d2 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,827 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.4.1-py2.py3-none-any.whl#sha256=7b29e1249b460cbf99396d25d6b7898d394a4f354f06f4574240f9226aaf70de (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,828 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.4.0-py2.py3-none-any.whl#sha256=1e8e41f2ade8de1b613de4a5fba5a29828bbd23b449c1c6fc503ab0dd52aa61f (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,829 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.3.1-py2.py3-none-any.whl#sha256=3431b025e519118e06c5ccb19b7a28cbf5f40fc6029496521569f2647a0fab3a (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,829 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.3.0-py2.py3-none-any.whl#sha256=164322a4f376c6a503756677793912d937dfb6330f3973c9dc8fdb89eafa44e3 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,830 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.2.0-py2.py3-none-any.whl#sha256=bc59509223e3450150b291f42032d3cea874b0544820fe778507ccca510f03b5 (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,830 Skipping link: No binaries permitted for vermouth: https://www.piwheels.org/simple/vermouth/vermouth-0.1.0-py2.py3-none-any.whl#sha256=28068403a9546c028aca0d749c0401d00d6aa1ec66f1cf8bb91f8e293294cc2e (from https://www.piwheels.org/simple/vermouth/) 2022-12-02T16:38:47,831 Skipping link: not a file: https://www.piwheels.org/simple/vermouth/ 2022-12-02T16:38:47,831 Skipping link: not a file: https://pypi.org/simple/vermouth/ 2022-12-02T16:38:47,872 Given no hashes to check 1 links for project 'vermouth': discarding no candidates 2022-12-02T16:38:47,901 Collecting vermouth==0.8.1 2022-12-02T16:38:47,906 Created temporary directory: /tmp/pip-unpack-640rtuhp 2022-12-02T16:38:48,343 Downloading vermouth-0.8.1.tar.gz (2.4 MB) 2022-12-02T16:38:52,357 Added vermouth==0.8.1 from https://files.pythonhosted.org/packages/1a/49/4e20bde1dbaab255a469c7944c1e6a767e7449e1dd5b20e3f2524083d6eb/vermouth-0.8.1.tar.gz to build tracker '/tmp/pip-build-tracker-r4t9d4dg' 2022-12-02T16:38:52,367 Created temporary directory: /tmp/pip-build-env-gmlktjeg 2022-12-02T16:38:52,379 Installing build dependencies: started 2022-12-02T16:38:52,381 Running command pip subprocess to install build dependencies 2022-12-02T16:38:55,040 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-12-02T16:38:55,823 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-02T16:38:55,877 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-02T16:38:56,738 Collecting wheel 2022-12-02T16:38:56,792 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-02T16:39:00,444 Collecting setuptools>=30.3.0 2022-12-02T16:39:00,722 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-02T16:39:01,438 Collecting pbr 2022-12-02T16:39:01,534 Using cached https://www.piwheels.org/simple/pbr/pbr-5.11.0-py2.py3-none-any.whl (112 kB) 2022-12-02T16:39:06,992 Installing collected packages: wheel, setuptools, pbr 2022-12-02T16:39:07,270 Creating /tmp/pip-build-env-gmlktjeg/overlay/bin 2022-12-02T16:39:07,274 changing mode of /tmp/pip-build-env-gmlktjeg/overlay/bin/wheel to 755 2022-12-02T16:39:12,749 changing mode of /tmp/pip-build-env-gmlktjeg/overlay/bin/pbr to 755 2022-12-02T16:39:12,784 Successfully installed pbr-5.11.0 setuptools-65.6.3 wheel-0.38.4 2022-12-02T16:39:12,815 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-02T16:39:12,816 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-02T16:39:13,254 Installing build dependencies: finished with status 'done' 2022-12-02T16:39:13,282 Getting requirements to build wheel: started 2022-12-02T16:39:13,284 Running command Getting requirements to build wheel 2022-12-02T16:39:15,230 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'description-content-type' will not be supported in future versions. Please use the underscore name 'description_content_type' instead 2022-12-02T16:39:15,232 % (opt, underscore_opt) 2022-12-02T16:39:15,233 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'setup-requires' will not be supported in future versions. Please use the underscore name 'setup_requires' instead 2022-12-02T16:39:15,233 % (opt, underscore_opt) 2022-12-02T16:39:15,234 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'install-requires' will not be supported in future versions. Please use the underscore name 'install_requires' instead 2022-12-02T16:39:15,234 % (opt, underscore_opt) 2022-12-02T16:39:15,235 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'zip-safe' will not be supported in future versions. Please use the underscore name 'zip_safe' instead 2022-12-02T16:39:15,235 % (opt, underscore_opt) 2022-12-02T16:39:15,422 Getting requirements to build wheel: finished with status 'done' 2022-12-02T16:39:15,450 Created temporary directory: /tmp/pip-modern-metadata-s7yjyxcv 2022-12-02T16:39:15,457 Preparing metadata (pyproject.toml): started 2022-12-02T16:39:15,459 Running command Preparing metadata (pyproject.toml) 2022-12-02T16:39:17,645 running dist_info 2022-12-02T16:39:17,652 creating /tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info 2022-12-02T16:39:17,716 writing /tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/PKG-INFO 2022-12-02T16:39:17,724 writing dependency_links to /tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/dependency_links.txt 2022-12-02T16:39:17,729 writing requirements to /tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/requires.txt 2022-12-02T16:39:17,731 writing top-level names to /tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/top_level.txt 2022-12-02T16:39:17,734 [pbr] Processing SOURCES.txt 2022-12-02T16:39:17,735 writing manifest file '/tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/SOURCES.txt' 2022-12-02T16:39:18,291 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/easy_install.py:147: EasyInstallDeprecationWarning: easy_install command is deprecated. Use build and pip and other standards-based tools. 2022-12-02T16:39:18,292 EasyInstallDeprecationWarning, 2022-12-02T16:39:18,292 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-12-02T16:39:18,293 setuptools.SetuptoolsDeprecationWarning, 2022-12-02T16:39:18,293 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'description-content-type' will not be supported in future versions. Please use the underscore name 'description_content_type' instead 2022-12-02T16:39:18,293 % (opt, underscore_opt) 2022-12-02T16:39:18,294 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'setup-requires' will not be supported in future versions. Please use the underscore name 'setup_requires' instead 2022-12-02T16:39:18,294 % (opt, underscore_opt) 2022-12-02T16:39:18,294 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'install-requires' will not be supported in future versions. Please use the underscore name 'install_requires' instead 2022-12-02T16:39:18,295 % (opt, underscore_opt) 2022-12-02T16:39:18,295 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'zip-safe' will not be supported in future versions. Please use the underscore name 'zip_safe' instead 2022-12-02T16:39:18,295 % (opt, underscore_opt) 2022-12-02T16:39:18,295 warning: no files found matching 'AUTHORS' 2022-12-02T16:39:18,296 warning: no files found matching 'ChangeLog' 2022-12-02T16:39:18,296 warning: no previously-included files found matching '.gitignore' 2022-12-02T16:39:18,297 warning: no previously-included files found matching '.gitreview' 2022-12-02T16:39:18,302 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-12-02T16:39:18,514 adding license file 'LICENSE' 2022-12-02T16:39:18,569 writing manifest file '/tmp/pip-modern-metadata-s7yjyxcv/vermouth.egg-info/SOURCES.txt' 2022-12-02T16:39:18,574 creating '/tmp/pip-modern-metadata-s7yjyxcv/vermouth-0.8.1.dist-info' 2022-12-02T16:39:18,682 The [wheel] section is deprecated. Use [bdist_wheel] instead. 2022-12-02T16:39:18,994 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-02T16:39:19,010 Source in /tmp/pip-wheel-_e531hu8/vermouth_f7c0e9caca2744548f4cb4f83bd3e2ef has version 0.8.1, which satisfies requirement vermouth==0.8.1 from https://files.pythonhosted.org/packages/1a/49/4e20bde1dbaab255a469c7944c1e6a767e7449e1dd5b20e3f2524083d6eb/vermouth-0.8.1.tar.gz 2022-12-02T16:39:19,012 Removed vermouth==0.8.1 from https://files.pythonhosted.org/packages/1a/49/4e20bde1dbaab255a469c7944c1e6a767e7449e1dd5b20e3f2524083d6eb/vermouth-0.8.1.tar.gz from build tracker '/tmp/pip-build-tracker-r4t9d4dg' 2022-12-02T16:39:19,022 Created temporary directory: /tmp/pip-unpack-h1qlxa0g 2022-12-02T16:39:19,024 Building wheels for collected packages: vermouth 2022-12-02T16:39:19,034 Created temporary directory: /tmp/pip-wheel-ve20t6g2 2022-12-02T16:39:19,034 Destination directory: /tmp/pip-wheel-ve20t6g2 2022-12-02T16:39:19,040 Building wheel for vermouth (pyproject.toml): started 2022-12-02T16:39:19,042 Running command Building wheel for vermouth (pyproject.toml) 2022-12-02T16:39:21,273 running bdist_wheel 2022-12-02T16:39:21,294 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/easy_install.py:147: EasyInstallDeprecationWarning: easy_install command is deprecated. Use build and pip and other standards-based tools. 2022-12-02T16:39:21,294 EasyInstallDeprecationWarning, 2022-12-02T16:39:21,294 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'description-content-type' will not be supported in future versions. Please use the underscore name 'description_content_type' instead 2022-12-02T16:39:21,295 % (opt, underscore_opt) 2022-12-02T16:39:21,295 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'setup-requires' will not be supported in future versions. Please use the underscore name 'setup_requires' instead 2022-12-02T16:39:21,296 % (opt, underscore_opt) 2022-12-02T16:39:21,296 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'install-requires' will not be supported in future versions. Please use the underscore name 'install_requires' instead 2022-12-02T16:39:21,296 % (opt, underscore_opt) 2022-12-02T16:39:21,297 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/dist.py:773: UserWarning: Usage of dash-separated 'zip-safe' will not be supported in future versions. Please use the underscore name 'zip_safe' instead 2022-12-02T16:39:21,297 % (opt, underscore_opt) 2022-12-02T16:39:21,297 The [wheel] section is deprecated. Use [bdist_wheel] instead. 2022-12-02T16:39:21,331 running build 2022-12-02T16:39:21,332 running build_py 2022-12-02T16:39:21,353 creating build 2022-12-02T16:39:21,354 creating build/lib 2022-12-02T16:39:21,356 creating build/lib/vermouth 2022-12-02T16:39:21,357 creating build/lib/vermouth/processors 2022-12-02T16:39:21,359 copying vermouth/processors/gro_reader.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,363 copying vermouth/processors/name_moltype.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,367 copying vermouth/processors/rename_modified_residues.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,370 copying vermouth/processors/add_molecule_edges.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,374 copying vermouth/processors/annotate_mut_mod.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,378 copying vermouth/processors/processor.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,382 copying vermouth/processors/go_vs_includes.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,386 copying vermouth/processors/tune_cystein_bridges.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,389 copying vermouth/processors/__init__.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,393 copying vermouth/processors/set_molecule_meta.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,396 copying vermouth/processors/sort_molecule_atoms.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,400 copying vermouth/processors/apply_rubber_band.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,404 copying vermouth/processors/do_mapping.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,410 copying vermouth/processors/merge_all_molecules.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,414 copying vermouth/processors/repair_graph.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,420 copying vermouth/processors/pdb_reader.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,424 copying vermouth/processors/attach_mass.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,428 copying vermouth/processors/merge_chains.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,433 copying vermouth/processors/make_bonds.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,438 copying vermouth/processors/quote.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,442 copying vermouth/processors/canonicalize_modifications.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,446 copying vermouth/processors/locate_charge_dummies.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,452 copying vermouth/processors/average_beads.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,456 copying vermouth/processors/apply_posres.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,459 copying vermouth/processors/do_links.py -> build/lib/vermouth/processors 2022-12-02T16:39:21,470 creating build/lib/vermouth/tests 2022-12-02T16:39:21,471 copying vermouth/tests/test_tune_cystein_bridges.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,476 copying vermouth/tests/test_selectors.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,480 copying vermouth/tests/test_set_molecule_meta.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,484 copying vermouth/tests/test_ffinput.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,489 copying vermouth/tests/test_utils.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,493 copying vermouth/tests/test_average_beads.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,497 copying vermouth/tests/test_map_parser.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,502 copying vermouth/tests/test_ptm_detection.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,506 copying vermouth/tests/__init__.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,509 copying vermouth/tests/test_repair_graph.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,514 copying vermouth/tests/test_map_input.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,519 copying vermouth/tests/test_do_mapping.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,524 copying vermouth/tests/helper_functions.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,527 copying vermouth/tests/datafiles.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,531 copying vermouth/tests/test_grappa.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,535 copying vermouth/tests/test_add_molecule_edges.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,539 copying vermouth/tests/test_itp_files.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,545 copying vermouth/tests/test_edge_tuning.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,551 copying vermouth/tests/test_logging.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,556 copying vermouth/tests/test_graph_utils.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,561 copying vermouth/tests/test_geometry.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,566 copying vermouth/tests/test_make_bonds.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,571 copying vermouth/tests/test_sort_molecule_atoms.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,575 copying vermouth/tests/test_mapping_integrative.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,580 copying vermouth/tests/test_dssp.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,585 copying vermouth/tests/molecule_strategies.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,590 copying vermouth/tests/test_ismags.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,596 copying vermouth/tests/test_annotate_mut_mod.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,601 copying vermouth/tests/test_forcefield.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,606 copying vermouth/tests/test_ff_files.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,612 copying vermouth/tests/test_apply_rubber_band.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,617 copying vermouth/tests/test_molecule.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,623 copying vermouth/tests/test_section_parser.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,627 copying vermouth/tests/test_go_vs_includes.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,630 copying vermouth/tests/test_links.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,634 copying vermouth/tests/test_name_moltype.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,639 copying vermouth/tests/test_version.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,642 copying vermouth/tests/test_file_writer.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,646 copying vermouth/tests/test_native_forcefield.py -> build/lib/vermouth/tests 2022-12-02T16:39:21,651 creating build/lib/vermouth/gmx 2022-12-02T16:39:21,653 copying vermouth/gmx/itp_read.py -> build/lib/vermouth/gmx 2022-12-02T16:39:21,658 copying vermouth/gmx/__init__.py -> build/lib/vermouth/gmx 2022-12-02T16:39:21,661 copying vermouth/gmx/itp.py -> build/lib/vermouth/gmx 2022-12-02T16:39:21,666 copying vermouth/gmx/gro.py -> build/lib/vermouth/gmx 2022-12-02T16:39:21,670 copying vermouth/gmx/rtp.py -> build/lib/vermouth/gmx 2022-12-02T16:39:21,676 creating build/lib/vermouth/tests/integration_tests 2022-12-02T16:39:21,678 copying vermouth/tests/integration_tests/__init__.py -> build/lib/vermouth/tests/integration_tests 2022-12-02T16:39:21,681 copying vermouth/tests/integration_tests/test_integration.py -> build/lib/vermouth/tests/integration_tests 2022-12-02T16:39:21,689 copying vermouth/parser_utils.py -> build/lib/vermouth 2022-12-02T16:39:21,694 copying vermouth/map_parser.py -> build/lib/vermouth 2022-12-02T16:39:21,699 copying vermouth/__init__.py -> build/lib/vermouth 2022-12-02T16:39:21,703 copying vermouth/ismags.py -> build/lib/vermouth 2022-12-02T16:39:21,710 copying vermouth/utils.py -> build/lib/vermouth 2022-12-02T16:39:21,714 copying vermouth/log_helpers.py -> build/lib/vermouth 2022-12-02T16:39:21,719 copying vermouth/forcefield.py -> build/lib/vermouth 2022-12-02T16:39:21,723 copying vermouth/citation_parser.py -> build/lib/vermouth 2022-12-02T16:39:21,727 copying vermouth/selectors.py -> build/lib/vermouth 2022-12-02T16:39:21,732 copying vermouth/graph_utils.py -> build/lib/vermouth 2022-12-02T16:39:21,737 copying vermouth/edge_tuning.py -> build/lib/vermouth 2022-12-02T16:39:21,741 copying vermouth/truncating_formatter.py -> build/lib/vermouth 2022-12-02T16:39:21,745 copying vermouth/file_writer.py -> build/lib/vermouth 2022-12-02T16:39:21,750 copying vermouth/ffinput.py -> build/lib/vermouth 2022-12-02T16:39:21,756 copying vermouth/system.py -> build/lib/vermouth 2022-12-02T16:39:21,760 copying vermouth/map_input.py -> build/lib/vermouth 2022-12-02T16:39:21,765 copying vermouth/geometry.py -> build/lib/vermouth 2022-12-02T16:39:21,769 copying vermouth/molecule.py -> build/lib/vermouth 2022-12-02T16:39:21,777 creating build/lib/vermouth/dssp 2022-12-02T16:39:21,779 copying vermouth/dssp/dssp.py -> build/lib/vermouth/dssp 2022-12-02T16:39:21,784 copying vermouth/dssp/__init__.py -> build/lib/vermouth/dssp 2022-12-02T16:39:21,789 creating build/lib/vermouth/pdb 2022-12-02T16:39:21,790 copying vermouth/pdb/pdb.py -> build/lib/vermouth/pdb 2022-12-02T16:39:21,795 copying vermouth/pdb/__init__.py -> build/lib/vermouth/pdb 2022-12-02T16:39:21,798 running egg_info 2022-12-02T16:39:21,866 writing vermouth.egg-info/PKG-INFO 2022-12-02T16:39:21,872 writing dependency_links to vermouth.egg-info/dependency_links.txt 2022-12-02T16:39:21,876 writing requirements to vermouth.egg-info/requires.txt 2022-12-02T16:39:21,879 writing top-level names to vermouth.egg-info/top_level.txt 2022-12-02T16:39:21,881 [pbr] Reusing existing SOURCES.txt 2022-12-02T16:39:22,045 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,046 !! 2022-12-02T16:39:22,047 ############################ 2022-12-02T16:39:22,047 # Package would be ignored # 2022-12-02T16:39:22,047 ############################ 2022-12-02T16:39:22,047 Python recognizes 'vermouth.data' as an importable package, 2022-12-02T16:39:22,048 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,049 'vermouth.data' has been automatically added to the distribution only 2022-12-02T16:39:22,049 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,049 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,050 Please make sure that 'vermouth.data' is included as a package by using 2022-12-02T16:39:22,050 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,050 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,051 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,051 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,051 documentation page. 2022-12-02T16:39:22,052 !! 2022-12-02T16:39:22,053 check.warn(importable) 2022-12-02T16:39:22,053 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.amber' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,054 !! 2022-12-02T16:39:22,054 ############################ 2022-12-02T16:39:22,055 # Package would be ignored # 2022-12-02T16:39:22,055 ############################ 2022-12-02T16:39:22,055 Python recognizes 'vermouth.data.force_fields.amber' as an importable package, 2022-12-02T16:39:22,056 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,056 'vermouth.data.force_fields.amber' has been automatically added to the distribution only 2022-12-02T16:39:22,056 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,057 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,057 Please make sure that 'vermouth.data.force_fields.amber' is included as a package by using 2022-12-02T16:39:22,058 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,058 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,058 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,059 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,059 documentation page. 2022-12-02T16:39:22,060 !! 2022-12-02T16:39:22,061 check.warn(importable) 2022-12-02T16:39:22,061 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.charmm' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,061 !! 2022-12-02T16:39:22,062 ############################ 2022-12-02T16:39:22,062 # Package would be ignored # 2022-12-02T16:39:22,063 ############################ 2022-12-02T16:39:22,063 Python recognizes 'vermouth.data.force_fields.charmm' as an importable package, 2022-12-02T16:39:22,063 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,064 'vermouth.data.force_fields.charmm' has been automatically added to the distribution only 2022-12-02T16:39:22,064 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,064 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,065 Please make sure that 'vermouth.data.force_fields.charmm' is included as a package by using 2022-12-02T16:39:22,065 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,066 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,066 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,066 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,067 documentation page. 2022-12-02T16:39:22,068 !! 2022-12-02T16:39:22,068 check.warn(importable) 2022-12-02T16:39:22,069 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.elnedyn21' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,069 !! 2022-12-02T16:39:22,070 ############################ 2022-12-02T16:39:22,070 # Package would be ignored # 2022-12-02T16:39:22,070 ############################ 2022-12-02T16:39:22,071 Python recognizes 'vermouth.data.force_fields.elnedyn21' as an importable package, 2022-12-02T16:39:22,071 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,071 'vermouth.data.force_fields.elnedyn21' has been automatically added to the distribution only 2022-12-02T16:39:22,072 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,072 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,073 Please make sure that 'vermouth.data.force_fields.elnedyn21' is included as a package by using 2022-12-02T16:39:22,073 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,073 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,073 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,074 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,074 documentation page. 2022-12-02T16:39:22,075 !! 2022-12-02T16:39:22,076 check.warn(importable) 2022-12-02T16:39:22,076 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.elnedyn22' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,076 !! 2022-12-02T16:39:22,077 ############################ 2022-12-02T16:39:22,078 # Package would be ignored # 2022-12-02T16:39:22,078 ############################ 2022-12-02T16:39:22,078 Python recognizes 'vermouth.data.force_fields.elnedyn22' as an importable package, 2022-12-02T16:39:22,078 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,079 'vermouth.data.force_fields.elnedyn22' has been automatically added to the distribution only 2022-12-02T16:39:22,079 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,080 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,080 Please make sure that 'vermouth.data.force_fields.elnedyn22' is included as a package by using 2022-12-02T16:39:22,081 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,081 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,081 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,082 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,082 documentation page. 2022-12-02T16:39:22,083 !! 2022-12-02T16:39:22,083 check.warn(importable) 2022-12-02T16:39:22,084 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.elnedyn22p' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,084 !! 2022-12-02T16:39:22,085 ############################ 2022-12-02T16:39:22,085 # Package would be ignored # 2022-12-02T16:39:22,085 ############################ 2022-12-02T16:39:22,086 Python recognizes 'vermouth.data.force_fields.elnedyn22p' as an importable package, 2022-12-02T16:39:22,086 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,086 'vermouth.data.force_fields.elnedyn22p' has been automatically added to the distribution only 2022-12-02T16:39:22,087 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,087 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,088 Please make sure that 'vermouth.data.force_fields.elnedyn22p' is included as a package by using 2022-12-02T16:39:22,088 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,088 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,089 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,089 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,089 documentation page. 2022-12-02T16:39:22,090 !! 2022-12-02T16:39:22,091 check.warn(importable) 2022-12-02T16:39:22,091 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.gromos' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,091 !! 2022-12-02T16:39:22,092 ############################ 2022-12-02T16:39:22,093 # Package would be ignored # 2022-12-02T16:39:22,093 ############################ 2022-12-02T16:39:22,093 Python recognizes 'vermouth.data.force_fields.gromos' as an importable package, 2022-12-02T16:39:22,093 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,094 'vermouth.data.force_fields.gromos' has been automatically added to the distribution only 2022-12-02T16:39:22,094 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,095 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,095 Please make sure that 'vermouth.data.force_fields.gromos' is included as a package by using 2022-12-02T16:39:22,095 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,096 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,096 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,097 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,097 documentation page. 2022-12-02T16:39:22,098 !! 2022-12-02T16:39:22,098 check.warn(importable) 2022-12-02T16:39:22,099 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.martini22' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,099 !! 2022-12-02T16:39:22,100 ############################ 2022-12-02T16:39:22,100 # Package would be ignored # 2022-12-02T16:39:22,101 ############################ 2022-12-02T16:39:22,101 Python recognizes 'vermouth.data.force_fields.martini22' as an importable package, 2022-12-02T16:39:22,101 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,102 'vermouth.data.force_fields.martini22' has been automatically added to the distribution only 2022-12-02T16:39:22,102 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,102 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,103 Please make sure that 'vermouth.data.force_fields.martini22' is included as a package by using 2022-12-02T16:39:22,103 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,103 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,104 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,104 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,105 documentation page. 2022-12-02T16:39:22,105 !! 2022-12-02T16:39:22,106 check.warn(importable) 2022-12-02T16:39:22,106 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.martini22p' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,107 !! 2022-12-02T16:39:22,107 ############################ 2022-12-02T16:39:22,108 # Package would be ignored # 2022-12-02T16:39:22,108 ############################ 2022-12-02T16:39:22,108 Python recognizes 'vermouth.data.force_fields.martini22p' as an importable package, 2022-12-02T16:39:22,109 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,109 'vermouth.data.force_fields.martini22p' has been automatically added to the distribution only 2022-12-02T16:39:22,109 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,110 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,110 Please make sure that 'vermouth.data.force_fields.martini22p' is included as a package by using 2022-12-02T16:39:22,111 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,111 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,111 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,112 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,112 documentation page. 2022-12-02T16:39:22,113 !! 2022-12-02T16:39:22,113 check.warn(importable) 2022-12-02T16:39:22,114 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.martini3001' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,114 !! 2022-12-02T16:39:22,115 ############################ 2022-12-02T16:39:22,115 # Package would be ignored # 2022-12-02T16:39:22,115 ############################ 2022-12-02T16:39:22,116 Python recognizes 'vermouth.data.force_fields.martini3001' as an importable package, 2022-12-02T16:39:22,116 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,117 'vermouth.data.force_fields.martini3001' has been automatically added to the distribution only 2022-12-02T16:39:22,117 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,117 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,118 Please make sure that 'vermouth.data.force_fields.martini3001' is included as a package by using 2022-12-02T16:39:22,118 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,118 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,119 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,119 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,119 documentation page. 2022-12-02T16:39:22,120 !! 2022-12-02T16:39:22,121 check.warn(importable) 2022-12-02T16:39:22,121 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.martini30b32' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,121 !! 2022-12-02T16:39:22,122 ############################ 2022-12-02T16:39:22,123 # Package would be ignored # 2022-12-02T16:39:22,123 ############################ 2022-12-02T16:39:22,123 Python recognizes 'vermouth.data.force_fields.martini30b32' as an importable package, 2022-12-02T16:39:22,123 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,124 'vermouth.data.force_fields.martini30b32' has been automatically added to the distribution only 2022-12-02T16:39:22,124 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,125 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,125 Please make sure that 'vermouth.data.force_fields.martini30b32' is included as a package by using 2022-12-02T16:39:22,125 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,126 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,126 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,127 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,127 documentation page. 2022-12-02T16:39:22,128 !! 2022-12-02T16:39:22,128 check.warn(importable) 2022-12-02T16:39:22,129 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.force_fields.martini30dev' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,129 !! 2022-12-02T16:39:22,130 ############################ 2022-12-02T16:39:22,130 # Package would be ignored # 2022-12-02T16:39:22,130 ############################ 2022-12-02T16:39:22,131 Python recognizes 'vermouth.data.force_fields.martini30dev' as an importable package, 2022-12-02T16:39:22,131 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,132 'vermouth.data.force_fields.martini30dev' has been automatically added to the distribution only 2022-12-02T16:39:22,132 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,132 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,133 Please make sure that 'vermouth.data.force_fields.martini30dev' is included as a package by using 2022-12-02T16:39:22,133 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,133 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,134 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,134 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,134 documentation page. 2022-12-02T16:39:22,135 !! 2022-12-02T16:39:22,136 check.warn(importable) 2022-12-02T16:39:22,136 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,136 !! 2022-12-02T16:39:22,137 ############################ 2022-12-02T16:39:22,137 # Package would be ignored # 2022-12-02T16:39:22,138 ############################ 2022-12-02T16:39:22,138 Python recognizes 'vermouth.data.mappings' as an importable package, 2022-12-02T16:39:22,138 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,139 'vermouth.data.mappings' has been automatically added to the distribution only 2022-12-02T16:39:22,139 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,140 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,140 Please make sure that 'vermouth.data.mappings' is included as a package by using 2022-12-02T16:39:22,140 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,141 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,141 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,141 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,142 documentation page. 2022-12-02T16:39:22,143 !! 2022-12-02T16:39:22,143 check.warn(importable) 2022-12-02T16:39:22,143 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings.elnedyn' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,144 !! 2022-12-02T16:39:22,145 ############################ 2022-12-02T16:39:22,145 # Package would be ignored # 2022-12-02T16:39:22,145 ############################ 2022-12-02T16:39:22,145 Python recognizes 'vermouth.data.mappings.elnedyn' as an importable package, 2022-12-02T16:39:22,146 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,146 'vermouth.data.mappings.elnedyn' has been automatically added to the distribution only 2022-12-02T16:39:22,147 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,147 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,147 Please make sure that 'vermouth.data.mappings.elnedyn' is included as a package by using 2022-12-02T16:39:22,148 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,148 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,148 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,149 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,150 documentation page. 2022-12-02T16:39:22,150 !! 2022-12-02T16:39:22,151 check.warn(importable) 2022-12-02T16:39:22,151 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings.elnedyn.elnedyn22p' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,152 !! 2022-12-02T16:39:22,152 ############################ 2022-12-02T16:39:22,153 # Package would be ignored # 2022-12-02T16:39:22,153 ############################ 2022-12-02T16:39:22,153 Python recognizes 'vermouth.data.mappings.elnedyn.elnedyn22p' as an importable package, 2022-12-02T16:39:22,154 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,154 'vermouth.data.mappings.elnedyn.elnedyn22p' has been automatically added to the distribution only 2022-12-02T16:39:22,154 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,155 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,155 Please make sure that 'vermouth.data.mappings.elnedyn.elnedyn22p' is included as a package by using 2022-12-02T16:39:22,156 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,156 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,156 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,157 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,157 documentation page. 2022-12-02T16:39:22,158 !! 2022-12-02T16:39:22,158 check.warn(importable) 2022-12-02T16:39:22,159 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings.elnedyn21' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,159 !! 2022-12-02T16:39:22,160 ############################ 2022-12-02T16:39:22,160 # Package would be ignored # 2022-12-02T16:39:22,160 ############################ 2022-12-02T16:39:22,161 Python recognizes 'vermouth.data.mappings.elnedyn21' as an importable package, 2022-12-02T16:39:22,161 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,162 'vermouth.data.mappings.elnedyn21' has been automatically added to the distribution only 2022-12-02T16:39:22,162 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,162 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,163 Please make sure that 'vermouth.data.mappings.elnedyn21' is included as a package by using 2022-12-02T16:39:22,163 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,163 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,164 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,164 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,165 documentation page. 2022-12-02T16:39:22,165 !! 2022-12-02T16:39:22,166 check.warn(importable) 2022-12-02T16:39:22,166 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings.martini3001' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,167 !! 2022-12-02T16:39:22,167 ############################ 2022-12-02T16:39:22,168 # Package would be ignored # 2022-12-02T16:39:22,168 ############################ 2022-12-02T16:39:22,168 Python recognizes 'vermouth.data.mappings.martini3001' as an importable package, 2022-12-02T16:39:22,169 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,169 'vermouth.data.mappings.martini3001' has been automatically added to the distribution only 2022-12-02T16:39:22,169 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,170 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,170 Please make sure that 'vermouth.data.mappings.martini3001' is included as a package by using 2022-12-02T16:39:22,171 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,171 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,171 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,172 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,172 documentation page. 2022-12-02T16:39:22,173 !! 2022-12-02T16:39:22,173 check.warn(importable) 2022-12-02T16:39:22,174 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.data.mappings.martini30b32' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,174 !! 2022-12-02T16:39:22,175 ############################ 2022-12-02T16:39:22,175 # Package would be ignored # 2022-12-02T16:39:22,175 ############################ 2022-12-02T16:39:22,176 Python recognizes 'vermouth.data.mappings.martini30b32' as an importable package, 2022-12-02T16:39:22,176 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,176 'vermouth.data.mappings.martini30b32' has been automatically added to the distribution only 2022-12-02T16:39:22,177 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,177 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,178 Please make sure that 'vermouth.data.mappings.martini30b32' is included as a package by using 2022-12-02T16:39:22,178 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,178 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,178 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,179 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,179 documentation page. 2022-12-02T16:39:22,180 !! 2022-12-02T16:39:22,181 check.warn(importable) 2022-12-02T16:39:22,181 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.graphing' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,181 !! 2022-12-02T16:39:22,182 ############################ 2022-12-02T16:39:22,182 # Package would be ignored # 2022-12-02T16:39:22,183 ############################ 2022-12-02T16:39:22,183 Python recognizes 'vermouth.graphing' as an importable package, 2022-12-02T16:39:22,183 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,184 'vermouth.graphing' has been automatically added to the distribution only 2022-12-02T16:39:22,184 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,184 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,185 Please make sure that 'vermouth.graphing' is included as a package by using 2022-12-02T16:39:22,185 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,186 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,186 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,186 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,187 documentation page. 2022-12-02T16:39:22,188 !! 2022-12-02T16:39:22,188 check.warn(importable) 2022-12-02T16:39:22,188 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.data' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,189 !! 2022-12-02T16:39:22,190 ############################ 2022-12-02T16:39:22,190 # Package would be ignored # 2022-12-02T16:39:22,190 ############################ 2022-12-02T16:39:22,190 Python recognizes 'vermouth.tests.data' as an importable package, 2022-12-02T16:39:22,191 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,191 'vermouth.tests.data' has been automatically added to the distribution only 2022-12-02T16:39:22,192 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,192 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,192 Please make sure that 'vermouth.tests.data' is included as a package by using 2022-12-02T16:39:22,193 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,193 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,193 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,194 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,194 documentation page. 2022-12-02T16:39:22,195 !! 2022-12-02T16:39:22,195 check.warn(importable) 2022-12-02T16:39:22,196 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.data.force_fields' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,196 !! 2022-12-02T16:39:22,197 ############################ 2022-12-02T16:39:22,197 # Package would be ignored # 2022-12-02T16:39:22,197 ############################ 2022-12-02T16:39:22,198 Python recognizes 'vermouth.tests.data.force_fields' as an importable package, 2022-12-02T16:39:22,198 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,199 'vermouth.tests.data.force_fields' has been automatically added to the distribution only 2022-12-02T16:39:22,199 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,199 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,200 Please make sure that 'vermouth.tests.data.force_fields' is included as a package by using 2022-12-02T16:39:22,200 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,200 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,201 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,201 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,201 documentation page. 2022-12-02T16:39:22,202 !! 2022-12-02T16:39:22,203 check.warn(importable) 2022-12-02T16:39:22,203 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.data.force_fields.pepplane' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,204 !! 2022-12-02T16:39:22,204 ############################ 2022-12-02T16:39:22,205 # Package would be ignored # 2022-12-02T16:39:22,205 ############################ 2022-12-02T16:39:22,205 Python recognizes 'vermouth.tests.data.force_fields.pepplane' as an importable package, 2022-12-02T16:39:22,206 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,206 'vermouth.tests.data.force_fields.pepplane' has been automatically added to the distribution only 2022-12-02T16:39:22,206 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,207 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,207 Please make sure that 'vermouth.tests.data.force_fields.pepplane' is included as a package by using 2022-12-02T16:39:22,208 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,208 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,208 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,209 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,209 documentation page. 2022-12-02T16:39:22,210 !! 2022-12-02T16:39:22,210 check.warn(importable) 2022-12-02T16:39:22,211 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.data.integration_tests' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:22,211 !! 2022-12-02T16:39:22,212 ############################ 2022-12-02T16:39:22,212 # Package would be ignored # 2022-12-02T16:39:22,212 ############################ 2022-12-02T16:39:22,213 Python recognizes 'vermouth.tests.data.integration_tests' as an importable package, 2022-12-02T16:39:22,213 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:22,214 'vermouth.tests.data.integration_tests' has been automatically added to the distribution only 2022-12-02T16:39:22,214 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:22,214 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:22,215 Please make sure that 'vermouth.tests.data.integration_tests' is included as a package by using 2022-12-02T16:39:22,215 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:22,215 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:22,216 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:22,216 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:22,216 documentation page. 2022-12-02T16:39:22,217 !! 2022-12-02T16:39:22,218 check.warn(importable) 2022-12-02T16:39:22,650 creating build/lib/vermouth/tests/data 2022-12-02T16:39:22,651 copying vermouth/tests/data/1bta.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,665 copying vermouth/tests/data/1bta_mutated.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,677 copying vermouth/tests/data/2QWO.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,703 copying vermouth/tests/data/2dn2.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,746 copying vermouth/tests/data/6E8W.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,917 copying vermouth/tests/data/ala5.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,923 copying vermouth/tests/data/ala5_cg.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,928 copying vermouth/tests/data/dna-short.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,935 copying vermouth/tests/data/dssp_1bta.ssd -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,941 copying vermouth/tests/data/heme.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,946 copying vermouth/tests/data/tri_alanine.pdb -> build/lib/vermouth/tests/data 2022-12-02T16:39:22,951 creating build/lib/vermouth/tests/data/force_fields 2022-12-02T16:39:22,953 creating build/lib/vermouth/tests/data/force_fields/martini-test 2022-12-02T16:39:22,956 copying vermouth/tests/data/force_fields/martini-test/aminoacids.ff -> build/lib/vermouth/tests/data/force_fields/martini-test 2022-12-02T16:39:22,962 creating build/lib/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:22,965 copying vermouth/tests/data/force_fields/pepplane/ala.ff -> build/lib/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:22,970 copying vermouth/tests/data/force_fields/pepplane/general.ff -> build/lib/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:22,975 copying vermouth/tests/data/force_fields/pepplane/modifications.ff -> build/lib/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:22,980 creating build/lib/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:22,982 copying vermouth/tests/data/force_fields/universal-test/aminoacids.rtp -> build/lib/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:22,989 copying vermouth/tests/data/force_fields/universal-test/modifications.ff -> build/lib/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:22,994 creating build/lib/vermouth/tests/data/integration_tests 2022-12-02T16:39:22,995 creating build/lib/vermouth/tests/data/integration_tests/tier-0 2022-12-02T16:39:22,997 creating build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:23,000 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:23,005 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:23,010 creating build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,013 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,018 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,023 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,028 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,032 copying vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:23,037 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:23,038 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:23,043 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:23,049 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,051 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,056 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,061 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,066 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,070 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,075 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,079 copying vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:23,083 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:23,085 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:23,089 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:23,097 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,099 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,104 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,110 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,114 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,118 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,123 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,127 copying vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:23,131 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:23,133 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:23,138 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:23,144 creating build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,145 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,151 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,156 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,160 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,164 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,169 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,173 copying vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:23,177 creating build/lib/vermouth/tests/data/integration_tests/tier-1 2022-12-02T16:39:23,179 creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:23,181 copying vermouth/tests/data/integration_tests/tier-1/1mj5/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:23,186 copying vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:23,208 creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:23,210 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:23,215 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:23,237 creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,239 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,247 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,251 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,258 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,262 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,267 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,279 copying vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:23,283 creating build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,285 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,293 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,297 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,305 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,310 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,314 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,326 copying vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:23,330 creating build/lib/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:23,332 copying vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:23,341 copying vermouth/tests/data/integration_tests/tier-1/3i40/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:23,345 creating build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,346 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,352 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,356 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,362 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,367 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,372 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,376 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,382 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,388 copying vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:23,392 creating build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:23,394 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:23,408 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:23,412 creating build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,414 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,422 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,426 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,431 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,435 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,439 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,450 copying vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:23,455 creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:23,456 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:23,461 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:23,468 creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,470 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,476 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,480 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,485 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,489 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,493 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,499 copying vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:23,503 creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:23,505 copying vermouth/tests/data/integration_tests/tier-1/EN_region/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:23,509 copying vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:23,518 creating build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,520 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,525 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,530 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,535 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,539 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,543 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,549 copying vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:23,553 creating build/lib/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:23,554 copying vermouth/tests/data/integration_tests/tier-1/bpti/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:23,559 copying vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:23,568 creating build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,570 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,575 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,580 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,584 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,589 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,594 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,601 copying vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:23,605 creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:23,607 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:23,611 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:23,624 creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,626 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,634 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,640 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,645 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,649 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,657 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,664 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,673 copying vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:23,678 creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:23,679 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:23,684 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:23,696 creating build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,697 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,704 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,710 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,715 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,721 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,729 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,733 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,740 copying vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:23,744 creating build/lib/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:23,745 copying vermouth/tests/data/integration_tests/tier-1/villin/README -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:23,750 copying vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:23,755 creating build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,757 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,762 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,766 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,770 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,775 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,779 copying vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top -> build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:23,783 creating build/lib/vermouth/tests/data/mappings 2022-12-02T16:39:23,784 creating build/lib/vermouth/tests/data/mappings/universal-test 2022-12-02T16:39:23,786 creating build/lib/vermouth/tests/data/mappings/universal-test/martini-test 2022-12-02T16:39:23,788 copying vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/martini-test 2022-12-02T16:39:23,792 creating build/lib/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:23,793 copying vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:23,798 copying vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping -> build/lib/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:23,802 creating build/lib/vermouth/tests/gmx 2022-12-02T16:39:23,804 copying vermouth/tests/gmx/test_gro.py -> build/lib/vermouth/tests/gmx 2022-12-02T16:39:23,809 copying vermouth/tests/gmx/test_itp.py -> build/lib/vermouth/tests/gmx 2022-12-02T16:39:23,814 creating build/lib/vermouth/tests/pdb 2022-12-02T16:39:23,816 copying vermouth/tests/pdb/test_read_pdb.py -> build/lib/vermouth/tests/pdb 2022-12-02T16:39:23,821 copying vermouth/tests/pdb/test_write_pdb.py -> build/lib/vermouth/tests/pdb 2022-12-02T16:39:23,825 creating build/lib/vermouth/data 2022-12-02T16:39:23,827 copying vermouth/data/quotes.txt -> build/lib/vermouth/data 2022-12-02T16:39:23,831 creating build/lib/vermouth/data/force_fields 2022-12-02T16:39:23,832 creating build/lib/vermouth/data/force_fields/amber 2022-12-02T16:39:23,834 copying vermouth/data/force_fields/amber/aminoacids.rtp -> build/lib/vermouth/data/force_fields/amber 2022-12-02T16:39:23,840 copying vermouth/data/force_fields/amber/modifications.ff -> build/lib/vermouth/data/force_fields/amber 2022-12-02T16:39:23,844 creating build/lib/vermouth/data/force_fields/charmm 2022-12-02T16:39:23,845 copying vermouth/data/force_fields/charmm/aminoacids.rtp -> build/lib/vermouth/data/force_fields/charmm 2022-12-02T16:39:23,851 copying vermouth/data/force_fields/charmm/modifications.ff -> build/lib/vermouth/data/force_fields/charmm 2022-12-02T16:39:23,855 copying vermouth/data/force_fields/charmm/small_molecule_charmm.ff -> build/lib/vermouth/data/force_fields/charmm 2022-12-02T16:39:23,955 creating build/lib/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:23,957 copying vermouth/data/force_fields/elnedyn21/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:23,962 copying vermouth/data/force_fields/elnedyn21/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:23,967 copying vermouth/data/force_fields/elnedyn21/general.ff -> build/lib/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:23,971 copying vermouth/data/force_fields/elnedyn21/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:23,976 creating build/lib/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:23,978 copying vermouth/data/force_fields/elnedyn22/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:23,984 copying vermouth/data/force_fields/elnedyn22/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:23,988 copying vermouth/data/force_fields/elnedyn22/general.ff -> build/lib/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:23,993 copying vermouth/data/force_fields/elnedyn22/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:23,997 creating build/lib/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:24,000 copying vermouth/data/force_fields/elnedyn22p/aminoacids.ff -> build/lib/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:24,005 copying vermouth/data/force_fields/elnedyn22p/citations.bib -> build/lib/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:24,010 copying vermouth/data/force_fields/elnedyn22p/general.ff -> build/lib/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:24,015 copying vermouth/data/force_fields/elnedyn22p/modifications.ff -> build/lib/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:24,019 creating build/lib/vermouth/data/force_fields/gromos 2022-12-02T16:39:24,021 copying vermouth/data/force_fields/gromos/aminoacids.rtp -> build/lib/vermouth/data/force_fields/gromos 2022-12-02T16:39:24,029 copying vermouth/data/force_fields/gromos/cofactors.ff -> build/lib/vermouth/data/force_fields/gromos 2022-12-02T16:39:24,034 copying vermouth/data/force_fields/gromos/modifications.ff -> build/lib/vermouth/data/force_fields/gromos 2022-12-02T16:39:24,038 creating build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,039 copying vermouth/data/force_fields/martini22/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,045 copying vermouth/data/force_fields/martini22/citations.bib -> build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,049 copying vermouth/data/force_fields/martini22/general.ff -> build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,053 copying vermouth/data/force_fields/martini22/modifications.ff -> build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,057 copying vermouth/data/force_fields/martini22/nucleotides.ff -> build/lib/vermouth/data/force_fields/martini22 2022-12-02T16:39:24,061 creating build/lib/vermouth/data/force_fields/martini22p 2022-12-02T16:39:24,063 copying vermouth/data/force_fields/martini22p/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini22p 2022-12-02T16:39:24,069 copying vermouth/data/force_fields/martini22p/citations.bib -> build/lib/vermouth/data/force_fields/martini22p 2022-12-02T16:39:24,073 copying vermouth/data/force_fields/martini22p/general.ff -> build/lib/vermouth/data/force_fields/martini22p 2022-12-02T16:39:24,076 copying vermouth/data/force_fields/martini22p/modifications.ff -> build/lib/vermouth/data/force_fields/martini22p 2022-12-02T16:39:24,080 creating build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,082 copying vermouth/data/force_fields/martini3001/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,088 copying vermouth/data/force_fields/martini3001/citations.bib -> build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,092 copying vermouth/data/force_fields/martini3001/general.ff -> build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,096 copying vermouth/data/force_fields/martini3001/modifications.ff -> build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,100 copying vermouth/data/force_fields/martini3001/small_molecule_martini3.ff -> build/lib/vermouth/data/force_fields/martini3001 2022-12-02T16:39:24,105 creating build/lib/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:24,106 copying vermouth/data/force_fields/martini30b32/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:24,112 copying vermouth/data/force_fields/martini30b32/citations.bib -> build/lib/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:24,116 copying vermouth/data/force_fields/martini30b32/modifications.ff -> build/lib/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:24,119 copying vermouth/data/force_fields/martini30b32/small_molecules.ff -> build/lib/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:24,123 creating build/lib/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:24,125 copying vermouth/data/force_fields/martini30dev/aminoacids.ff -> build/lib/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:24,131 copying vermouth/data/force_fields/martini30dev/citations.bib -> build/lib/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:24,135 copying vermouth/data/force_fields/martini30dev/modifications.ff -> build/lib/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:24,138 creating build/lib/vermouth/data/mappings 2022-12-02T16:39:24,140 copying vermouth/data/mappings/ala.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,144 copying vermouth/data/mappings/ala.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,148 copying vermouth/data/mappings/arg.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,152 copying vermouth/data/mappings/arg.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,155 copying vermouth/data/mappings/arg.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,159 copying vermouth/data/mappings/asn.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,163 copying vermouth/data/mappings/asn.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,167 copying vermouth/data/mappings/asn.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,171 copying vermouth/data/mappings/asp.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,175 copying vermouth/data/mappings/asp.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,179 copying vermouth/data/mappings/asp.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,182 copying vermouth/data/mappings/asp0.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,186 copying vermouth/data/mappings/chol.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,190 copying vermouth/data/mappings/cys.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,194 copying vermouth/data/mappings/cys.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,198 copying vermouth/data/mappings/dmpc.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,202 copying vermouth/data/mappings/dopc.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,207 copying vermouth/data/mappings/dppc.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,212 copying vermouth/data/mappings/dppg.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,217 copying vermouth/data/mappings/fmn.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,221 copying vermouth/data/mappings/gln.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,225 copying vermouth/data/mappings/gln.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,230 copying vermouth/data/mappings/gln.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,234 copying vermouth/data/mappings/glu.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,239 copying vermouth/data/mappings/glu.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,243 copying vermouth/data/mappings/glu.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,247 copying vermouth/data/mappings/glu0.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,252 copying vermouth/data/mappings/gly.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,256 copying vermouth/data/mappings/gly.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,261 copying vermouth/data/mappings/his.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,266 copying vermouth/data/mappings/his.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,271 copying vermouth/data/mappings/hsd.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,276 copying vermouth/data/mappings/hse.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,280 copying vermouth/data/mappings/hsp.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,285 copying vermouth/data/mappings/ile.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,290 copying vermouth/data/mappings/ile.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,294 copying vermouth/data/mappings/leu.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,299 copying vermouth/data/mappings/leu.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,304 copying vermouth/data/mappings/lys.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,308 copying vermouth/data/mappings/lys.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,313 copying vermouth/data/mappings/lys.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,318 copying vermouth/data/mappings/met.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,322 copying vermouth/data/mappings/met.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,326 copying vermouth/data/mappings/modifications.gromos.mapping -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,331 copying vermouth/data/mappings/modifications.mapping -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,335 copying vermouth/data/mappings/nad.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,339 copying vermouth/data/mappings/phe.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,343 copying vermouth/data/mappings/phe.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,347 copying vermouth/data/mappings/popc.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,352 copying vermouth/data/mappings/pope.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,356 copying vermouth/data/mappings/popg.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,360 copying vermouth/data/mappings/pops.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,364 copying vermouth/data/mappings/pro.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,368 copying vermouth/data/mappings/pro.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,372 copying vermouth/data/mappings/ser.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,376 copying vermouth/data/mappings/ser.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,381 copying vermouth/data/mappings/ser.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,384 copying vermouth/data/mappings/thr.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,388 copying vermouth/data/mappings/thr.charmm36.martini22p.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,392 copying vermouth/data/mappings/thr.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,396 copying vermouth/data/mappings/tpp.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,400 copying vermouth/data/mappings/trp.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,404 copying vermouth/data/mappings/trp.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,408 copying vermouth/data/mappings/tyr.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,412 copying vermouth/data/mappings/tyr.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,416 copying vermouth/data/mappings/val.charmm36.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,420 copying vermouth/data/mappings/val.gromos.map -> build/lib/vermouth/data/mappings 2022-12-02T16:39:24,424 creating build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,426 copying vermouth/data/mappings/elnedyn/ala.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,430 copying vermouth/data/mappings/elnedyn/arg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,434 copying vermouth/data/mappings/elnedyn/asn.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,438 copying vermouth/data/mappings/elnedyn/asp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,442 copying vermouth/data/mappings/elnedyn/chol.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,446 copying vermouth/data/mappings/elnedyn/cys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,450 copying vermouth/data/mappings/elnedyn/dmpc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,454 copying vermouth/data/mappings/elnedyn/dopc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,459 copying vermouth/data/mappings/elnedyn/dppc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,463 copying vermouth/data/mappings/elnedyn/dppg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,467 copying vermouth/data/mappings/elnedyn/gln.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,472 copying vermouth/data/mappings/elnedyn/glu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,476 copying vermouth/data/mappings/elnedyn/gly.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,480 copying vermouth/data/mappings/elnedyn/his.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,484 copying vermouth/data/mappings/elnedyn/ile.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,488 copying vermouth/data/mappings/elnedyn/leu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,492 copying vermouth/data/mappings/elnedyn/lys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,496 copying vermouth/data/mappings/elnedyn/met.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,500 copying vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,504 copying vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,509 copying vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,513 copying vermouth/data/mappings/elnedyn/phe.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,516 copying vermouth/data/mappings/elnedyn/popc.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,521 copying vermouth/data/mappings/elnedyn/pope.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,525 copying vermouth/data/mappings/elnedyn/popg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,530 copying vermouth/data/mappings/elnedyn/pops.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,534 copying vermouth/data/mappings/elnedyn/pro.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,538 copying vermouth/data/mappings/elnedyn/ser.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,542 copying vermouth/data/mappings/elnedyn/thr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,546 copying vermouth/data/mappings/elnedyn/trp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,550 copying vermouth/data/mappings/elnedyn/tyr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,554 copying vermouth/data/mappings/elnedyn/val.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn 2022-12-02T16:39:24,559 creating build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,560 copying vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,565 copying vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,569 copying vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,573 copying vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,577 copying vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,581 copying vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,586 copying vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,590 copying vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:24,594 creating build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,595 copying vermouth/data/mappings/elnedyn21/ala.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,600 copying vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,604 copying vermouth/data/mappings/elnedyn21/arg.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,608 copying vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,612 copying vermouth/data/mappings/elnedyn21/asn.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,616 copying vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,620 copying vermouth/data/mappings/elnedyn21/asp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,624 copying vermouth/data/mappings/elnedyn21/cys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,628 copying vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,632 copying vermouth/data/mappings/elnedyn21/gln.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,636 copying vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,641 copying vermouth/data/mappings/elnedyn21/glu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,645 copying vermouth/data/mappings/elnedyn21/gly.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,649 copying vermouth/data/mappings/elnedyn21/his.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,653 copying vermouth/data/mappings/elnedyn21/ile.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,657 copying vermouth/data/mappings/elnedyn21/leu.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,661 copying vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,665 copying vermouth/data/mappings/elnedyn21/lys.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,670 copying vermouth/data/mappings/elnedyn21/met.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,674 copying vermouth/data/mappings/elnedyn21/modifications.mapping -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,678 copying vermouth/data/mappings/elnedyn21/phe.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,682 copying vermouth/data/mappings/elnedyn21/pro.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,686 copying vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,690 copying vermouth/data/mappings/elnedyn21/ser.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,694 copying vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,698 copying vermouth/data/mappings/elnedyn21/thr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,702 copying vermouth/data/mappings/elnedyn21/trp.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,707 copying vermouth/data/mappings/elnedyn21/tyr.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,711 copying vermouth/data/mappings/elnedyn21/val.charmm36.map -> build/lib/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:24,715 creating build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,716 copying vermouth/data/mappings/martini3001/ala.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,721 copying vermouth/data/mappings/martini3001/ala.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,725 copying vermouth/data/mappings/martini3001/antr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,729 copying vermouth/data/mappings/martini3001/arg.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,733 copying vermouth/data/mappings/martini3001/arg.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,737 copying vermouth/data/mappings/martini3001/ash.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,741 copying vermouth/data/mappings/martini3001/asn.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,745 copying vermouth/data/mappings/martini3001/asn.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,749 copying vermouth/data/mappings/martini3001/asp.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,753 copying vermouth/data/mappings/martini3001/asp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,757 copying vermouth/data/mappings/martini3001/aspp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,762 copying vermouth/data/mappings/martini3001/bald.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,766 copying vermouth/data/mappings/martini3001/benz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,769 copying vermouth/data/mappings/martini3001/c3.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,773 copying vermouth/data/mappings/martini3001/chxe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,777 copying vermouth/data/mappings/martini3001/cpen.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,781 copying vermouth/data/mappings/martini3001/cume.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,785 copying vermouth/data/mappings/martini3001/cys.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,790 copying vermouth/data/mappings/martini3001/cys.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,793 copying vermouth/data/mappings/martini3001/diol.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,797 copying vermouth/data/mappings/martini3001/diox.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,802 copying vermouth/data/mappings/martini3001/dman.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,805 copying vermouth/data/mappings/martini3001/eben.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,809 copying vermouth/data/mappings/martini3001/fura.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,813 copying vermouth/data/mappings/martini3001/glh.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,817 copying vermouth/data/mappings/martini3001/gln.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,822 copying vermouth/data/mappings/martini3001/gln.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,828 copying vermouth/data/mappings/martini3001/glu.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,832 copying vermouth/data/mappings/martini3001/glu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,836 copying vermouth/data/mappings/martini3001/glup.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,840 copying vermouth/data/mappings/martini3001/gly.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,844 copying vermouth/data/mappings/martini3001/gly.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,848 copying vermouth/data/mappings/martini3001/hid.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,852 copying vermouth/data/mappings/martini3001/hie.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,856 copying vermouth/data/mappings/martini3001/hip.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,861 copying vermouth/data/mappings/martini3001/his.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,865 copying vermouth/data/mappings/martini3001/his.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,870 copying vermouth/data/mappings/martini3001/hsd.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,875 copying vermouth/data/mappings/martini3001/hse.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,879 copying vermouth/data/mappings/martini3001/hsp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,883 copying vermouth/data/mappings/martini3001/ile.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,887 copying vermouth/data/mappings/martini3001/ile.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,891 copying vermouth/data/mappings/martini3001/imia.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,895 copying vermouth/data/mappings/martini3001/inda.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,900 copying vermouth/data/mappings/martini3001/indo.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,904 copying vermouth/data/mappings/martini3001/leu.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,908 copying vermouth/data/mappings/martini3001/leu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,912 copying vermouth/data/mappings/martini3001/lsn.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,918 copying vermouth/data/mappings/martini3001/lyn.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,923 copying vermouth/data/mappings/martini3001/lys.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,927 copying vermouth/data/mappings/martini3001/lys.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,931 copying vermouth/data/mappings/martini3001/mboa.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,935 copying vermouth/data/mappings/martini3001/mcpe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,939 copying vermouth/data/mappings/martini3001/meob.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,943 copying vermouth/data/mappings/martini3001/met.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,947 copying vermouth/data/mappings/martini3001/met.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,951 copying vermouth/data/mappings/martini3001/mind.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,954 copying vermouth/data/mappings/martini3001/modifications.amber.mapping -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,958 copying vermouth/data/mappings/martini3001/modifications.charmm36.mapping -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,962 copying vermouth/data/mappings/martini3001/mxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,966 copying vermouth/data/mappings/martini3001/naft.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,971 copying vermouth/data/mappings/martini3001/nitb.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,974 copying vermouth/data/mappings/martini3001/oxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,978 copying vermouth/data/mappings/martini3001/pcro.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,982 copying vermouth/data/mappings/martini3001/phe.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,986 copying vermouth/data/mappings/martini3001/phe.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,990 copying vermouth/data/mappings/martini3001/phen.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,994 copying vermouth/data/mappings/martini3001/phmk.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:24,998 copying vermouth/data/mappings/martini3001/prld.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,001 copying vermouth/data/mappings/martini3001/pro.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,005 copying vermouth/data/mappings/martini3001/pro.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,010 copying vermouth/data/mappings/martini3001/pxyl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,014 copying vermouth/data/mappings/martini3001/pyr1.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,018 copying vermouth/data/mappings/martini3001/pyrd.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,021 copying vermouth/data/mappings/martini3001/pyrl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,025 copying vermouth/data/mappings/martini3001/pyrm.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,029 copying vermouth/data/mappings/martini3001/qinl.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,033 copying vermouth/data/mappings/martini3001/ser.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,037 copying vermouth/data/mappings/martini3001/ser.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,041 copying vermouth/data/mappings/martini3001/sm139.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,045 copying vermouth/data/mappings/martini3001/styr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,049 copying vermouth/data/mappings/martini3001/thaz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,053 copying vermouth/data/mappings/martini3001/thf.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,057 copying vermouth/data/mappings/martini3001/thip.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,062 copying vermouth/data/mappings/martini3001/thp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,066 copying vermouth/data/mappings/martini3001/thr.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,070 copying vermouth/data/mappings/martini3001/thr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,074 copying vermouth/data/mappings/martini3001/tolu.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,079 copying vermouth/data/mappings/martini3001/trp.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,083 copying vermouth/data/mappings/martini3001/trp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,087 copying vermouth/data/mappings/martini3001/tyr.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,091 copying vermouth/data/mappings/martini3001/tyr.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,095 copying vermouth/data/mappings/martini3001/val.amber.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,099 copying vermouth/data/mappings/martini3001/val.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,103 copying vermouth/data/mappings/martini3001/zimi.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,107 copying vermouth/data/mappings/martini3001/zthp.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,111 copying vermouth/data/mappings/martini3001/zthz.charmm36.map -> build/lib/vermouth/data/mappings/martini3001 2022-12-02T16:39:25,115 creating build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,117 copying vermouth/data/mappings/martini30b32/ala.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,121 copying vermouth/data/mappings/martini30b32/arg.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,125 copying vermouth/data/mappings/martini30b32/asn.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,129 copying vermouth/data/mappings/martini30b32/asp.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,133 copying vermouth/data/mappings/martini30b32/benz.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,138 copying vermouth/data/mappings/martini30b32/cys.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,142 copying vermouth/data/mappings/martini30b32/gln.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,146 copying vermouth/data/mappings/martini30b32/glu.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,150 copying vermouth/data/mappings/martini30b32/gly.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,154 copying vermouth/data/mappings/martini30b32/his.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,158 copying vermouth/data/mappings/martini30b32/hsd.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,162 copying vermouth/data/mappings/martini30b32/ile.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,166 copying vermouth/data/mappings/martini30b32/leu.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,170 copying vermouth/data/mappings/martini30b32/lys.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,174 copying vermouth/data/mappings/martini30b32/met.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,179 copying vermouth/data/mappings/martini30b32/modifications.mapping -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,183 copying vermouth/data/mappings/martini30b32/phe.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,187 copying vermouth/data/mappings/martini30b32/pro.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,191 copying vermouth/data/mappings/martini30b32/ser.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,195 copying vermouth/data/mappings/martini30b32/thr.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,200 copying vermouth/data/mappings/martini30b32/trp.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,204 copying vermouth/data/mappings/martini30b32/tyr.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,208 copying vermouth/data/mappings/martini30b32/val.charmm36.map -> build/lib/vermouth/data/mappings/martini30b32 2022-12-02T16:39:25,212 creating build/lib/vermouth/graphing 2022-12-02T16:39:25,213 copying vermouth/graphing/grappa.py -> build/lib/vermouth/graphing 2022-12-02T16:39:25,613 running build_scripts 2022-12-02T16:39:25,614 creating build/scripts-3.7 2022-12-02T16:39:25,616 copying and adjusting bin/martinize2 -> build/scripts-3.7 2022-12-02T16:39:25,625 changing mode of build/scripts-3.7/martinize2 from 644 to 755 2022-12-02T16:39:25,626 installing to build/bdist.linux-armv7l/wheel 2022-12-02T16:39:25,627 running install 2022-12-02T16:39:25,745 [pbr] Generating AUTHORS 2022-12-02T16:39:25,772 [pbr] AUTHORS complete (0.0s) 2022-12-02T16:39:25,773 running install_lib 2022-12-02T16:39:25,796 creating build/bdist.linux-armv7l 2022-12-02T16:39:25,797 creating build/bdist.linux-armv7l/wheel 2022-12-02T16:39:25,802 creating build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:25,804 copying build/lib/vermouth/parser_utils.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:25,811 creating build/bdist.linux-armv7l/wheel/vermouth/pdb 2022-12-02T16:39:25,813 copying build/lib/vermouth/pdb/pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/pdb 2022-12-02T16:39:25,819 copying build/lib/vermouth/pdb/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/pdb 2022-12-02T16:39:25,824 creating build/bdist.linux-armv7l/wheel/vermouth/data 2022-12-02T16:39:25,826 copying build/lib/vermouth/data/quotes.txt -> build/bdist.linux-armv7l/wheel/vermouth/data 2022-12-02T16:39:25,832 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields 2022-12-02T16:39:25,835 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:25,837 copying build/lib/vermouth/data/force_fields/martini30b32/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:25,843 copying build/lib/vermouth/data/force_fields/martini30b32/small_molecules.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:25,847 copying build/lib/vermouth/data/force_fields/martini30b32/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:25,852 copying build/lib/vermouth/data/force_fields/martini30b32/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30b32 2022-12-02T16:39:25,857 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:25,859 copying build/lib/vermouth/data/force_fields/elnedyn21/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:25,863 copying build/lib/vermouth/data/force_fields/elnedyn21/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:25,868 copying build/lib/vermouth/data/force_fields/elnedyn21/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:25,872 copying build/lib/vermouth/data/force_fields/elnedyn21/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn21 2022-12-02T16:39:25,877 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,878 copying build/lib/vermouth/data/force_fields/martini3001/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,882 copying build/lib/vermouth/data/force_fields/martini3001/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,889 copying build/lib/vermouth/data/force_fields/martini3001/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,892 copying build/lib/vermouth/data/force_fields/martini3001/small_molecule_martini3.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,897 copying build/lib/vermouth/data/force_fields/martini3001/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini3001 2022-12-02T16:39:25,902 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:25,903 copying build/lib/vermouth/data/force_fields/elnedyn22/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:25,907 copying build/lib/vermouth/data/force_fields/elnedyn22/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:25,912 copying build/lib/vermouth/data/force_fields/elnedyn22/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:25,916 copying build/lib/vermouth/data/force_fields/elnedyn22/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22 2022-12-02T16:39:25,921 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:25,922 copying build/lib/vermouth/data/force_fields/elnedyn22p/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:25,926 copying build/lib/vermouth/data/force_fields/elnedyn22p/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:25,931 copying build/lib/vermouth/data/force_fields/elnedyn22p/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:25,935 copying build/lib/vermouth/data/force_fields/elnedyn22p/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/elnedyn22p 2022-12-02T16:39:25,939 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber 2022-12-02T16:39:25,941 copying build/lib/vermouth/data/force_fields/amber/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber 2022-12-02T16:39:25,947 copying build/lib/vermouth/data/force_fields/amber/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/amber 2022-12-02T16:39:25,951 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos 2022-12-02T16:39:25,953 copying build/lib/vermouth/data/force_fields/gromos/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos 2022-12-02T16:39:25,962 copying build/lib/vermouth/data/force_fields/gromos/cofactors.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos 2022-12-02T16:39:25,966 copying build/lib/vermouth/data/force_fields/gromos/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/gromos 2022-12-02T16:39:25,971 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:25,973 copying build/lib/vermouth/data/force_fields/martini30dev/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:25,978 copying build/lib/vermouth/data/force_fields/martini30dev/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:25,982 copying build/lib/vermouth/data/force_fields/martini30dev/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini30dev 2022-12-02T16:39:25,986 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm 2022-12-02T16:39:25,988 copying build/lib/vermouth/data/force_fields/charmm/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm 2022-12-02T16:39:25,994 copying build/lib/vermouth/data/force_fields/charmm/small_molecule_charmm.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm 2022-12-02T16:39:26,097 copying build/lib/vermouth/data/force_fields/charmm/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/charmm 2022-12-02T16:39:26,102 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,103 copying build/lib/vermouth/data/force_fields/martini22/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,107 copying build/lib/vermouth/data/force_fields/martini22/nucleotides.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,112 copying build/lib/vermouth/data/force_fields/martini22/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,118 copying build/lib/vermouth/data/force_fields/martini22/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,122 copying build/lib/vermouth/data/force_fields/martini22/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22 2022-12-02T16:39:26,127 creating build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p 2022-12-02T16:39:26,130 copying build/lib/vermouth/data/force_fields/martini22p/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p 2022-12-02T16:39:26,135 copying build/lib/vermouth/data/force_fields/martini22p/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p 2022-12-02T16:39:26,140 copying build/lib/vermouth/data/force_fields/martini22p/citations.bib -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p 2022-12-02T16:39:26,145 copying build/lib/vermouth/data/force_fields/martini22p/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/data/force_fields/martini22p 2022-12-02T16:39:26,152 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,155 copying build/lib/vermouth/data/mappings/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,161 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,163 copying build/lib/vermouth/data/mappings/martini30b32/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,168 copying build/lib/vermouth/data/mappings/martini30b32/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,173 copying build/lib/vermouth/data/mappings/martini30b32/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,177 copying build/lib/vermouth/data/mappings/martini30b32/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,181 copying build/lib/vermouth/data/mappings/martini30b32/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,186 copying build/lib/vermouth/data/mappings/martini30b32/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,190 copying build/lib/vermouth/data/mappings/martini30b32/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,194 copying build/lib/vermouth/data/mappings/martini30b32/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,199 copying build/lib/vermouth/data/mappings/martini30b32/benz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,203 copying build/lib/vermouth/data/mappings/martini30b32/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,207 copying build/lib/vermouth/data/mappings/martini30b32/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,212 copying build/lib/vermouth/data/mappings/martini30b32/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,216 copying build/lib/vermouth/data/mappings/martini30b32/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,221 copying build/lib/vermouth/data/mappings/martini30b32/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,225 copying build/lib/vermouth/data/mappings/martini30b32/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,229 copying build/lib/vermouth/data/mappings/martini30b32/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,234 copying build/lib/vermouth/data/mappings/martini30b32/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,238 copying build/lib/vermouth/data/mappings/martini30b32/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,242 copying build/lib/vermouth/data/mappings/martini30b32/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,247 copying build/lib/vermouth/data/mappings/martini30b32/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,251 copying build/lib/vermouth/data/mappings/martini30b32/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,255 copying build/lib/vermouth/data/mappings/martini30b32/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,259 copying build/lib/vermouth/data/mappings/martini30b32/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini30b32 2022-12-02T16:39:26,264 copying build/lib/vermouth/data/mappings/asn.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,268 copying build/lib/vermouth/data/mappings/ser.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,274 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,275 copying build/lib/vermouth/data/mappings/elnedyn21/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,280 copying build/lib/vermouth/data/mappings/elnedyn21/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,283 copying build/lib/vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,287 copying build/lib/vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,290 copying build/lib/vermouth/data/mappings/elnedyn21/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,294 copying build/lib/vermouth/data/mappings/elnedyn21/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,298 copying build/lib/vermouth/data/mappings/elnedyn21/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,301 copying build/lib/vermouth/data/mappings/elnedyn21/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,305 copying build/lib/vermouth/data/mappings/elnedyn21/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,309 copying build/lib/vermouth/data/mappings/elnedyn21/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,312 copying build/lib/vermouth/data/mappings/elnedyn21/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,316 copying build/lib/vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,320 copying build/lib/vermouth/data/mappings/elnedyn21/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,324 copying build/lib/vermouth/data/mappings/elnedyn21/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,327 copying build/lib/vermouth/data/mappings/elnedyn21/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,331 copying build/lib/vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,335 copying build/lib/vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,338 copying build/lib/vermouth/data/mappings/elnedyn21/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,342 copying build/lib/vermouth/data/mappings/elnedyn21/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,346 copying build/lib/vermouth/data/mappings/elnedyn21/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,350 copying build/lib/vermouth/data/mappings/elnedyn21/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,353 copying build/lib/vermouth/data/mappings/elnedyn21/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,357 copying build/lib/vermouth/data/mappings/elnedyn21/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,360 copying build/lib/vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,364 copying build/lib/vermouth/data/mappings/elnedyn21/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,368 copying build/lib/vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,371 copying build/lib/vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,375 copying build/lib/vermouth/data/mappings/elnedyn21/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,379 copying build/lib/vermouth/data/mappings/elnedyn21/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn21 2022-12-02T16:39:26,383 copying build/lib/vermouth/data/mappings/cys.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,391 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,392 copying build/lib/vermouth/data/mappings/martini3001/pyrd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,396 copying build/lib/vermouth/data/mappings/martini3001/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,400 copying build/lib/vermouth/data/mappings/martini3001/gly.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,404 copying build/lib/vermouth/data/mappings/martini3001/lyn.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,407 copying build/lib/vermouth/data/mappings/martini3001/ser.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,411 copying build/lib/vermouth/data/mappings/martini3001/val.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,415 copying build/lib/vermouth/data/mappings/martini3001/aspp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,418 copying build/lib/vermouth/data/mappings/martini3001/phmk.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,422 copying build/lib/vermouth/data/mappings/martini3001/meob.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,426 copying build/lib/vermouth/data/mappings/martini3001/diol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,429 copying build/lib/vermouth/data/mappings/martini3001/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,433 copying build/lib/vermouth/data/mappings/martini3001/mxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,436 copying build/lib/vermouth/data/mappings/martini3001/styr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,440 copying build/lib/vermouth/data/mappings/martini3001/thp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,443 copying build/lib/vermouth/data/mappings/martini3001/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,447 copying build/lib/vermouth/data/mappings/martini3001/dman.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,450 copying build/lib/vermouth/data/mappings/martini3001/c3.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,454 copying build/lib/vermouth/data/mappings/martini3001/glu.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,457 copying build/lib/vermouth/data/mappings/martini3001/pyr1.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,461 copying build/lib/vermouth/data/mappings/martini3001/ile.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,464 copying build/lib/vermouth/data/mappings/martini3001/phe.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,468 copying build/lib/vermouth/data/mappings/martini3001/inda.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,471 copying build/lib/vermouth/data/mappings/martini3001/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,475 copying build/lib/vermouth/data/mappings/martini3001/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,479 copying build/lib/vermouth/data/mappings/martini3001/pxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,482 copying build/lib/vermouth/data/mappings/martini3001/thf.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,486 copying build/lib/vermouth/data/mappings/martini3001/fura.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,490 copying build/lib/vermouth/data/mappings/martini3001/prld.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,493 copying build/lib/vermouth/data/mappings/martini3001/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,497 copying build/lib/vermouth/data/mappings/martini3001/glup.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,500 copying build/lib/vermouth/data/mappings/martini3001/modifications.charmm36.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,504 copying build/lib/vermouth/data/mappings/martini3001/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,507 copying build/lib/vermouth/data/mappings/martini3001/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,511 copying build/lib/vermouth/data/mappings/martini3001/indo.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,515 copying build/lib/vermouth/data/mappings/martini3001/benz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,519 copying build/lib/vermouth/data/mappings/martini3001/zthz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,522 copying build/lib/vermouth/data/mappings/martini3001/hsp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,526 copying build/lib/vermouth/data/mappings/martini3001/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,529 copying build/lib/vermouth/data/mappings/martini3001/naft.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,533 copying build/lib/vermouth/data/mappings/martini3001/hid.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,537 copying build/lib/vermouth/data/mappings/martini3001/leu.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,540 copying build/lib/vermouth/data/mappings/martini3001/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,544 copying build/lib/vermouth/data/mappings/martini3001/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,548 copying build/lib/vermouth/data/mappings/martini3001/glh.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,552 copying build/lib/vermouth/data/mappings/martini3001/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,555 copying build/lib/vermouth/data/mappings/martini3001/trp.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,559 copying build/lib/vermouth/data/mappings/martini3001/pro.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,562 copying build/lib/vermouth/data/mappings/martini3001/his.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,566 copying build/lib/vermouth/data/mappings/martini3001/pcro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,570 copying build/lib/vermouth/data/mappings/martini3001/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,573 copying build/lib/vermouth/data/mappings/martini3001/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,577 copying build/lib/vermouth/data/mappings/martini3001/mind.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,581 copying build/lib/vermouth/data/mappings/martini3001/arg.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,585 copying build/lib/vermouth/data/mappings/martini3001/oxyl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,588 copying build/lib/vermouth/data/mappings/martini3001/modifications.amber.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,592 copying build/lib/vermouth/data/mappings/martini3001/phen.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,595 copying build/lib/vermouth/data/mappings/martini3001/diox.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,599 copying build/lib/vermouth/data/mappings/martini3001/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,603 copying build/lib/vermouth/data/mappings/martini3001/cys.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,606 copying build/lib/vermouth/data/mappings/martini3001/mboa.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,610 copying build/lib/vermouth/data/mappings/martini3001/hse.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,614 copying build/lib/vermouth/data/mappings/martini3001/lsn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,617 copying build/lib/vermouth/data/mappings/martini3001/thip.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,621 copying build/lib/vermouth/data/mappings/martini3001/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,624 copying build/lib/vermouth/data/mappings/martini3001/hip.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,628 copying build/lib/vermouth/data/mappings/martini3001/lys.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,632 copying build/lib/vermouth/data/mappings/martini3001/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,635 copying build/lib/vermouth/data/mappings/martini3001/eben.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,639 copying build/lib/vermouth/data/mappings/martini3001/asn.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,642 copying build/lib/vermouth/data/mappings/martini3001/pyrm.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,646 copying build/lib/vermouth/data/mappings/martini3001/gln.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,650 copying build/lib/vermouth/data/mappings/martini3001/tyr.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,653 copying build/lib/vermouth/data/mappings/martini3001/qinl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,657 copying build/lib/vermouth/data/mappings/martini3001/met.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,660 copying build/lib/vermouth/data/mappings/martini3001/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,664 copying build/lib/vermouth/data/mappings/martini3001/cume.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,668 copying build/lib/vermouth/data/mappings/martini3001/ash.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,671 copying build/lib/vermouth/data/mappings/martini3001/zimi.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,675 copying build/lib/vermouth/data/mappings/martini3001/bald.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,678 copying build/lib/vermouth/data/mappings/martini3001/antr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,683 copying build/lib/vermouth/data/mappings/martini3001/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,686 copying build/lib/vermouth/data/mappings/martini3001/zthp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,691 copying build/lib/vermouth/data/mappings/martini3001/thr.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,695 copying build/lib/vermouth/data/mappings/martini3001/hie.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,699 copying build/lib/vermouth/data/mappings/martini3001/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,704 copying build/lib/vermouth/data/mappings/martini3001/sm139.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,708 copying build/lib/vermouth/data/mappings/martini3001/thaz.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,712 copying build/lib/vermouth/data/mappings/martini3001/chxe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,716 copying build/lib/vermouth/data/mappings/martini3001/asp.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,721 copying build/lib/vermouth/data/mappings/martini3001/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,725 copying build/lib/vermouth/data/mappings/martini3001/ala.amber.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,729 copying build/lib/vermouth/data/mappings/martini3001/cpen.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,734 copying build/lib/vermouth/data/mappings/martini3001/nitb.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,738 copying build/lib/vermouth/data/mappings/martini3001/mcpe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,742 copying build/lib/vermouth/data/mappings/martini3001/imia.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,746 copying build/lib/vermouth/data/mappings/martini3001/pyrl.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,750 copying build/lib/vermouth/data/mappings/martini3001/tolu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/martini3001 2022-12-02T16:39:26,755 copying build/lib/vermouth/data/mappings/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,759 copying build/lib/vermouth/data/mappings/popg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,764 copying build/lib/vermouth/data/mappings/asp.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,768 copying build/lib/vermouth/data/mappings/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,772 copying build/lib/vermouth/data/mappings/thr.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,775 copying build/lib/vermouth/data/mappings/pro.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,779 copying build/lib/vermouth/data/mappings/pops.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,783 copying build/lib/vermouth/data/mappings/dppg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,786 copying build/lib/vermouth/data/mappings/trp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,790 copying build/lib/vermouth/data/mappings/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,793 copying build/lib/vermouth/data/mappings/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,797 copying build/lib/vermouth/data/mappings/chol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,801 copying build/lib/vermouth/data/mappings/thr.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,804 copying build/lib/vermouth/data/mappings/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,808 copying build/lib/vermouth/data/mappings/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,812 copying build/lib/vermouth/data/mappings/dopc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,816 copying build/lib/vermouth/data/mappings/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,820 copying build/lib/vermouth/data/mappings/fmn.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,823 copying build/lib/vermouth/data/mappings/hsp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,827 copying build/lib/vermouth/data/mappings/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,830 copying build/lib/vermouth/data/mappings/ile.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,834 copying build/lib/vermouth/data/mappings/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,840 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,842 copying build/lib/vermouth/data/mappings/elnedyn/lys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,846 copying build/lib/vermouth/data/mappings/elnedyn/leu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,849 copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,853 copying build/lib/vermouth/data/mappings/elnedyn/popg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,859 creating build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,861 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,865 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,869 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,872 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,876 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,880 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,883 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,887 copying build/lib/vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn/elnedyn22p 2022-12-02T16:39:26,891 copying build/lib/vermouth/data/mappings/elnedyn/gly.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,894 copying build/lib/vermouth/data/mappings/elnedyn/pops.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,898 copying build/lib/vermouth/data/mappings/elnedyn/dppg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,901 copying build/lib/vermouth/data/mappings/elnedyn/arg.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,905 copying build/lib/vermouth/data/mappings/elnedyn/his.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,909 copying build/lib/vermouth/data/mappings/elnedyn/chol.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,912 copying build/lib/vermouth/data/mappings/elnedyn/ser.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,916 copying build/lib/vermouth/data/mappings/elnedyn/met.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,920 copying build/lib/vermouth/data/mappings/elnedyn/dopc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,924 copying build/lib/vermouth/data/mappings/elnedyn/trp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,928 copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,931 copying build/lib/vermouth/data/mappings/elnedyn/glu.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,935 copying build/lib/vermouth/data/mappings/elnedyn/gln.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,939 copying build/lib/vermouth/data/mappings/elnedyn/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,942 copying build/lib/vermouth/data/mappings/elnedyn/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,946 copying build/lib/vermouth/data/mappings/elnedyn/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,949 copying build/lib/vermouth/data/mappings/elnedyn/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,953 copying build/lib/vermouth/data/mappings/elnedyn/pope.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,956 copying build/lib/vermouth/data/mappings/elnedyn/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,960 copying build/lib/vermouth/data/mappings/elnedyn/dmpc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,964 copying build/lib/vermouth/data/mappings/elnedyn/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,967 copying build/lib/vermouth/data/mappings/elnedyn/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,971 copying build/lib/vermouth/data/mappings/elnedyn/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,975 copying build/lib/vermouth/data/mappings/elnedyn/dppc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,979 copying build/lib/vermouth/data/mappings/elnedyn/popc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,983 copying build/lib/vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,987 copying build/lib/vermouth/data/mappings/elnedyn/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,991 copying build/lib/vermouth/data/mappings/elnedyn/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings/elnedyn 2022-12-02T16:39:26,994 copying build/lib/vermouth/data/mappings/cys.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:26,998 copying build/lib/vermouth/data/mappings/ala.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,001 copying build/lib/vermouth/data/mappings/asp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,005 copying build/lib/vermouth/data/mappings/gln.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,009 copying build/lib/vermouth/data/mappings/ile.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,012 copying build/lib/vermouth/data/mappings/lys.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,016 copying build/lib/vermouth/data/mappings/phe.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,020 copying build/lib/vermouth/data/mappings/thr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,023 copying build/lib/vermouth/data/mappings/modifications.gromos.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,026 copying build/lib/vermouth/data/mappings/nad.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,030 copying build/lib/vermouth/data/mappings/arg.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,033 copying build/lib/vermouth/data/mappings/pope.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,037 copying build/lib/vermouth/data/mappings/asn.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,041 copying build/lib/vermouth/data/mappings/hse.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,044 copying build/lib/vermouth/data/mappings/tyr.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,048 copying build/lib/vermouth/data/mappings/dmpc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,051 copying build/lib/vermouth/data/mappings/glu.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,055 copying build/lib/vermouth/data/mappings/asp.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,058 copying build/lib/vermouth/data/mappings/phe.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,062 copying build/lib/vermouth/data/mappings/met.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,066 copying build/lib/vermouth/data/mappings/glu0.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,069 copying build/lib/vermouth/data/mappings/his.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,073 copying build/lib/vermouth/data/mappings/tpp.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,076 copying build/lib/vermouth/data/mappings/val.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,080 copying build/lib/vermouth/data/mappings/val.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,083 copying build/lib/vermouth/data/mappings/gln.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,087 copying build/lib/vermouth/data/mappings/dppc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,091 copying build/lib/vermouth/data/mappings/asn.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,095 copying build/lib/vermouth/data/mappings/popc.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,099 copying build/lib/vermouth/data/mappings/tyr.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,103 copying build/lib/vermouth/data/mappings/glu.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,106 copying build/lib/vermouth/data/mappings/hsd.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,110 copying build/lib/vermouth/data/mappings/ala.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,114 copying build/lib/vermouth/data/mappings/lys.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,117 copying build/lib/vermouth/data/mappings/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,121 copying build/lib/vermouth/data/mappings/pro.charmm36.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,124 copying build/lib/vermouth/data/mappings/gly.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,128 copying build/lib/vermouth/data/mappings/ser.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,132 copying build/lib/vermouth/data/mappings/leu.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,135 copying build/lib/vermouth/data/mappings/arg.charmm36.martini22p.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,139 copying build/lib/vermouth/data/mappings/asp0.gromos.map -> build/bdist.linux-armv7l/wheel/vermouth/data/mappings 2022-12-02T16:39:27,142 copying build/lib/vermouth/map_parser.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,148 copying build/lib/vermouth/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,152 creating build/bdist.linux-armv7l/wheel/vermouth/graphing 2022-12-02T16:39:27,154 copying build/lib/vermouth/graphing/grappa.py -> build/bdist.linux-armv7l/wheel/vermouth/graphing 2022-12-02T16:39:27,159 copying build/lib/vermouth/ismags.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,165 copying build/lib/vermouth/utils.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,169 copying build/lib/vermouth/log_helpers.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,173 copying build/lib/vermouth/forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,177 copying build/lib/vermouth/citation_parser.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,182 copying build/lib/vermouth/selectors.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,186 copying build/lib/vermouth/graph_utils.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,191 copying build/lib/vermouth/edge_tuning.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,195 copying build/lib/vermouth/truncating_formatter.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:27,201 creating build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:27,203 copying build/lib/vermouth/tests/test_tune_cystein_bridges.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:27,209 creating build/bdist.linux-armv7l/wheel/vermouth/tests/pdb 2022-12-02T16:39:27,210 copying build/lib/vermouth/tests/pdb/test_write_pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/pdb 2022-12-02T16:39:27,215 copying build/lib/vermouth/tests/pdb/test_read_pdb.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/pdb 2022-12-02T16:39:27,219 copying build/lib/vermouth/tests/test_selectors.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:27,223 copying build/lib/vermouth/tests/test_set_molecule_meta.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:27,228 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:27,230 copying build/lib/vermouth/tests/data/1bta_mutated.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:27,240 copying build/lib/vermouth/tests/data/tri_alanine.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:27,245 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests 2022-12-02T16:39:27,248 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1 2022-12-02T16:39:27,251 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:27,253 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:27,258 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,260 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,267 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,271 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,275 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,278 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,288 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,295 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2 2022-12-02T16:39:27,298 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5-charmm 2022-12-02T16:39:27,323 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:27,324 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:27,329 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,331 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,335 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,338 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,342 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,346 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,351 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,354 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2 2022-12-02T16:39:27,359 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_chain 2022-12-02T16:39:27,367 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:27,369 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:27,374 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,375 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,379 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,383 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,386 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,391 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,395 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,401 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti/martinize2 2022-12-02T16:39:27,406 copying build/lib/vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/bpti 2022-12-02T16:39:27,414 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:27,416 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:27,424 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40 2022-12-02T16:39:27,429 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,430 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,436 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,440 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,444 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,447 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,451 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,456 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,460 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,464 copying build/lib/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/3i40/martinize2 2022-12-02T16:39:27,470 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:27,471 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:27,476 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,477 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,485 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,489 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,492 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,495 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,503 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,508 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,512 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2 2022-12-02T16:39:27,517 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme_prot 2022-12-02T16:39:27,528 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:27,530 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:27,535 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,536 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,540 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,544 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,547 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,552 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,557 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,561 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2 2022-12-02T16:39:27,566 copying build/lib/vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/EN_region 2022-12-02T16:39:27,575 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:27,576 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:27,581 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,583 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,592 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,595 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,599 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,603 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,614 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,622 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2 2022-12-02T16:39:27,626 copying build/lib/vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/1mj5 2022-12-02T16:39:27,650 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:27,652 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:27,667 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap 2022-12-02T16:39:27,672 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,673 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,677 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,682 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,685 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,695 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,702 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,706 copying build/lib/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2 2022-12-02T16:39:27,712 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:27,714 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:27,719 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,721 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,728 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,731 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,735 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,739 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,746 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,752 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,758 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2 2022-12-02T16:39:27,763 copying build/lib/vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/lysozyme 2022-12-02T16:39:27,775 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:27,777 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:27,782 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,784 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,788 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,792 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,795 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,800 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,805 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin/martinize2 2022-12-02T16:39:27,808 copying build/lib/vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-1/villin 2022-12-02T16:39:27,815 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0 2022-12-02T16:39:27,818 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:27,820 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:27,826 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,827 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,831 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,835 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,839 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,844 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,848 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,852 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2 2022-12-02T16:39:27,857 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix 2022-12-02T16:39:27,866 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:27,868 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:27,873 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,875 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,879 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,883 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,886 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,890 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2 2022-12-02T16:39:27,893 copying build/lib/vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/dipro-termini 2022-12-02T16:39:27,898 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:27,900 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:27,905 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,907 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,912 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,915 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,919 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,923 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,927 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,930 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2 2022-12-02T16:39:27,935 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage 2022-12-02T16:39:27,941 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:27,943 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:27,948 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,950 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,954 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,957 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,961 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,965 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,969 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,973 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2 2022-12-02T16:39:27,977 copying build/lib/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet 2022-12-02T16:39:27,985 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields 2022-12-02T16:39:27,987 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/martini-test 2022-12-02T16:39:27,989 copying build/lib/vermouth/tests/data/force_fields/martini-test/aminoacids.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/martini-test 2022-12-02T16:39:27,996 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:27,997 copying build/lib/vermouth/tests/data/force_fields/universal-test/aminoacids.rtp -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:28,004 copying build/lib/vermouth/tests/data/force_fields/universal-test/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/universal-test 2022-12-02T16:39:28,008 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:28,010 copying build/lib/vermouth/tests/data/force_fields/pepplane/general.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:28,014 copying build/lib/vermouth/tests/data/force_fields/pepplane/modifications.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:28,017 copying build/lib/vermouth/tests/data/force_fields/pepplane/ala.ff -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/force_fields/pepplane 2022-12-02T16:39:28,021 copying build/lib/vermouth/tests/data/1bta.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,031 copying build/lib/vermouth/tests/data/6E8W.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,263 copying build/lib/vermouth/tests/data/2dn2.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,305 copying build/lib/vermouth/tests/data/dna-short.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,310 copying build/lib/vermouth/tests/data/heme.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,314 copying build/lib/vermouth/tests/data/ala5.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,318 copying build/lib/vermouth/tests/data/ala5_cg.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,323 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings 2022-12-02T16:39:28,326 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test 2022-12-02T16:39:28,329 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/martini-test 2022-12-02T16:39:28,331 copying build/lib/vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/martini-test 2022-12-02T16:39:28,336 creating build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:28,338 copying build/lib/vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:28,342 copying build/lib/vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping -> build/bdist.linux-armv7l/wheel/vermouth/tests/data/mappings/universal-test/pepplane 2022-12-02T16:39:28,345 copying build/lib/vermouth/tests/data/2QWO.pdb -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,371 copying build/lib/vermouth/tests/data/dssp_1bta.ssd -> build/bdist.linux-armv7l/wheel/vermouth/tests/data 2022-12-02T16:39:28,376 copying build/lib/vermouth/tests/test_ffinput.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,382 copying build/lib/vermouth/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,386 copying build/lib/vermouth/tests/test_average_beads.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,390 copying build/lib/vermouth/tests/test_map_parser.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,396 copying build/lib/vermouth/tests/test_ptm_detection.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,400 copying build/lib/vermouth/tests/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,403 copying build/lib/vermouth/tests/test_repair_graph.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,409 copying build/lib/vermouth/tests/test_map_input.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,415 copying build/lib/vermouth/tests/test_do_mapping.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,421 copying build/lib/vermouth/tests/helper_functions.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,425 copying build/lib/vermouth/tests/datafiles.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,430 copying build/lib/vermouth/tests/test_grappa.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,436 creating build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests 2022-12-02T16:39:28,439 copying build/lib/vermouth/tests/integration_tests/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests 2022-12-02T16:39:28,444 copying build/lib/vermouth/tests/integration_tests/test_integration.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/integration_tests 2022-12-02T16:39:28,449 copying build/lib/vermouth/tests/test_add_molecule_edges.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,453 copying build/lib/vermouth/tests/test_itp_files.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,458 copying build/lib/vermouth/tests/test_edge_tuning.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,465 copying build/lib/vermouth/tests/test_logging.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,470 copying build/lib/vermouth/tests/test_graph_utils.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,477 copying build/lib/vermouth/tests/test_geometry.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,481 copying build/lib/vermouth/tests/test_make_bonds.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,486 copying build/lib/vermouth/tests/test_sort_molecule_atoms.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,489 copying build/lib/vermouth/tests/test_mapping_integrative.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,493 copying build/lib/vermouth/tests/test_dssp.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,499 copying build/lib/vermouth/tests/molecule_strategies.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,504 copying build/lib/vermouth/tests/test_ismags.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,510 copying build/lib/vermouth/tests/test_annotate_mut_mod.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,515 copying build/lib/vermouth/tests/test_forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,520 copying build/lib/vermouth/tests/test_ff_files.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,527 copying build/lib/vermouth/tests/test_apply_rubber_band.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,533 copying build/lib/vermouth/tests/test_molecule.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,541 copying build/lib/vermouth/tests/test_section_parser.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,546 creating build/bdist.linux-armv7l/wheel/vermouth/tests/gmx 2022-12-02T16:39:28,549 copying build/lib/vermouth/tests/gmx/test_gro.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/gmx 2022-12-02T16:39:28,555 copying build/lib/vermouth/tests/gmx/test_itp.py -> build/bdist.linux-armv7l/wheel/vermouth/tests/gmx 2022-12-02T16:39:28,560 copying build/lib/vermouth/tests/test_go_vs_includes.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,564 copying build/lib/vermouth/tests/test_links.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,569 copying build/lib/vermouth/tests/test_name_moltype.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,574 copying build/lib/vermouth/tests/test_version.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,579 copying build/lib/vermouth/tests/test_file_writer.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,584 copying build/lib/vermouth/tests/test_native_forcefield.py -> build/bdist.linux-armv7l/wheel/vermouth/tests 2022-12-02T16:39:28,590 creating build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,592 copying build/lib/vermouth/processors/gro_reader.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,597 copying build/lib/vermouth/processors/name_moltype.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,601 copying build/lib/vermouth/processors/rename_modified_residues.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,605 copying build/lib/vermouth/processors/add_molecule_edges.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,610 copying build/lib/vermouth/processors/annotate_mut_mod.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,615 copying build/lib/vermouth/processors/processor.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,620 copying build/lib/vermouth/processors/go_vs_includes.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,625 copying build/lib/vermouth/processors/tune_cystein_bridges.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,629 copying build/lib/vermouth/processors/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,633 copying build/lib/vermouth/processors/set_molecule_meta.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,638 copying build/lib/vermouth/processors/sort_molecule_atoms.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,642 copying build/lib/vermouth/processors/apply_rubber_band.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,647 copying build/lib/vermouth/processors/do_mapping.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,653 copying build/lib/vermouth/processors/merge_all_molecules.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,656 copying build/lib/vermouth/processors/repair_graph.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,662 copying build/lib/vermouth/processors/pdb_reader.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,665 copying build/lib/vermouth/processors/attach_mass.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,669 copying build/lib/vermouth/processors/merge_chains.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,673 copying build/lib/vermouth/processors/make_bonds.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,677 copying build/lib/vermouth/processors/quote.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,681 copying build/lib/vermouth/processors/canonicalize_modifications.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,686 copying build/lib/vermouth/processors/locate_charge_dummies.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,691 copying build/lib/vermouth/processors/average_beads.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,695 copying build/lib/vermouth/processors/apply_posres.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,700 copying build/lib/vermouth/processors/do_links.py -> build/bdist.linux-armv7l/wheel/vermouth/processors 2022-12-02T16:39:28,705 copying build/lib/vermouth/file_writer.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,710 copying build/lib/vermouth/ffinput.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,716 copying build/lib/vermouth/system.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,722 creating build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,724 copying build/lib/vermouth/gmx/itp_read.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,730 copying build/lib/vermouth/gmx/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,734 copying build/lib/vermouth/gmx/itp.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,739 copying build/lib/vermouth/gmx/gro.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,744 copying build/lib/vermouth/gmx/rtp.py -> build/bdist.linux-armv7l/wheel/vermouth/gmx 2022-12-02T16:39:28,749 copying build/lib/vermouth/map_input.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,756 creating build/bdist.linux-armv7l/wheel/vermouth/dssp 2022-12-02T16:39:28,758 copying build/lib/vermouth/dssp/dssp.py -> build/bdist.linux-armv7l/wheel/vermouth/dssp 2022-12-02T16:39:28,764 copying build/lib/vermouth/dssp/__init__.py -> build/bdist.linux-armv7l/wheel/vermouth/dssp 2022-12-02T16:39:28,768 copying build/lib/vermouth/geometry.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,772 copying build/lib/vermouth/molecule.py -> build/bdist.linux-armv7l/wheel/vermouth 2022-12-02T16:39:28,779 running install_egg_info 2022-12-02T16:39:28,793 Copying vermouth.egg-info to build/bdist.linux-armv7l/wheel/vermouth-0.8.1-py3.7.egg-info 2022-12-02T16:39:28,822 running install_scripts 2022-12-02T16:39:28,825 creating build/bdist.linux-armv7l/wheel/vermouth-0.8.1.data 2022-12-02T16:39:28,827 creating build/bdist.linux-armv7l/wheel/vermouth-0.8.1.data/scripts 2022-12-02T16:39:28,830 copying build/scripts-3.7/martinize2 -> build/bdist.linux-armv7l/wheel/vermouth-0.8.1.data/scripts 2022-12-02T16:39:28,836 changing mode of build/bdist.linux-armv7l/wheel/vermouth-0.8.1.data/scripts/martinize2 to 755 2022-12-02T16:39:28,884 creating build/bdist.linux-armv7l/wheel/vermouth-0.8.1.dist-info/WHEEL 2022-12-02T16:39:28,891 creating '/tmp/pip-wheel-ve20t6g2/.tmp-99lqafaa/vermouth-0.8.1-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-02T16:39:28,898 adding 'vermouth/__init__.py' 2022-12-02T16:39:28,903 adding 'vermouth/citation_parser.py' 2022-12-02T16:39:28,908 adding 'vermouth/edge_tuning.py' 2022-12-02T16:39:28,920 adding 'vermouth/ffinput.py' 2022-12-02T16:39:28,925 adding 'vermouth/file_writer.py' 2022-12-02T16:39:28,928 adding 'vermouth/forcefield.py' 2022-12-02T16:39:28,931 adding 'vermouth/geometry.py' 2022-12-02T16:39:28,936 adding 'vermouth/graph_utils.py' 2022-12-02T16:39:28,949 adding 'vermouth/ismags.py' 2022-12-02T16:39:28,954 adding 'vermouth/log_helpers.py' 2022-12-02T16:39:28,961 adding 'vermouth/map_input.py' 2022-12-02T16:39:28,971 adding 'vermouth/map_parser.py' 2022-12-02T16:39:28,988 adding 'vermouth/molecule.py' 2022-12-02T16:39:28,995 adding 'vermouth/parser_utils.py' 2022-12-02T16:39:28,999 adding 'vermouth/selectors.py' 2022-12-02T16:39:29,002 adding 'vermouth/system.py' 2022-12-02T16:39:29,005 adding 'vermouth/truncating_formatter.py' 2022-12-02T16:39:29,009 adding 'vermouth/utils.py' 2022-12-02T16:39:29,013 adding 'vermouth/data/quotes.txt' 2022-12-02T16:39:29,024 adding 'vermouth/data/force_fields/amber/aminoacids.rtp' 2022-12-02T16:39:29,027 adding 'vermouth/data/force_fields/amber/modifications.ff' 2022-12-02T16:39:29,033 adding 'vermouth/data/force_fields/charmm/aminoacids.rtp' 2022-12-02T16:39:29,036 adding 'vermouth/data/force_fields/charmm/modifications.ff' 2022-12-02T16:39:29,548 adding 'vermouth/data/force_fields/charmm/small_molecule_charmm.ff' 2022-12-02T16:39:29,592 adding 'vermouth/data/force_fields/elnedyn21/aminoacids.ff' 2022-12-02T16:39:29,595 adding 'vermouth/data/force_fields/elnedyn21/citations.bib' 2022-12-02T16:39:29,598 adding 'vermouth/data/force_fields/elnedyn21/general.ff' 2022-12-02T16:39:29,601 adding 'vermouth/data/force_fields/elnedyn21/modifications.ff' 2022-12-02T16:39:29,606 adding 'vermouth/data/force_fields/elnedyn22/aminoacids.ff' 2022-12-02T16:39:29,609 adding 'vermouth/data/force_fields/elnedyn22/citations.bib' 2022-12-02T16:39:29,612 adding 'vermouth/data/force_fields/elnedyn22/general.ff' 2022-12-02T16:39:29,615 adding 'vermouth/data/force_fields/elnedyn22/modifications.ff' 2022-12-02T16:39:29,621 adding 'vermouth/data/force_fields/elnedyn22p/aminoacids.ff' 2022-12-02T16:39:29,625 adding 'vermouth/data/force_fields/elnedyn22p/citations.bib' 2022-12-02T16:39:29,628 adding 'vermouth/data/force_fields/elnedyn22p/general.ff' 2022-12-02T16:39:29,632 adding 'vermouth/data/force_fields/elnedyn22p/modifications.ff' 2022-12-02T16:39:29,643 adding 'vermouth/data/force_fields/gromos/aminoacids.rtp' 2022-12-02T16:39:29,650 adding 'vermouth/data/force_fields/gromos/cofactors.ff' 2022-12-02T16:39:29,653 adding 'vermouth/data/force_fields/gromos/modifications.ff' 2022-12-02T16:39:29,659 adding 'vermouth/data/force_fields/martini22/aminoacids.ff' 2022-12-02T16:39:29,663 adding 'vermouth/data/force_fields/martini22/citations.bib' 2022-12-02T16:39:29,666 adding 'vermouth/data/force_fields/martini22/general.ff' 2022-12-02T16:39:29,669 adding 'vermouth/data/force_fields/martini22/modifications.ff' 2022-12-02T16:39:29,674 adding 'vermouth/data/force_fields/martini22/nucleotides.ff' 2022-12-02T16:39:29,682 adding 'vermouth/data/force_fields/martini22p/aminoacids.ff' 2022-12-02T16:39:29,685 adding 'vermouth/data/force_fields/martini22p/citations.bib' 2022-12-02T16:39:29,688 adding 'vermouth/data/force_fields/martini22p/general.ff' 2022-12-02T16:39:29,691 adding 'vermouth/data/force_fields/martini22p/modifications.ff' 2022-12-02T16:39:29,699 adding 'vermouth/data/force_fields/martini3001/aminoacids.ff' 2022-12-02T16:39:29,702 adding 'vermouth/data/force_fields/martini3001/citations.bib' 2022-12-02T16:39:29,705 adding 'vermouth/data/force_fields/martini3001/general.ff' 2022-12-02T16:39:29,707 adding 'vermouth/data/force_fields/martini3001/modifications.ff' 2022-12-02T16:39:29,712 adding 'vermouth/data/force_fields/martini3001/small_molecule_martini3.ff' 2022-12-02T16:39:29,721 adding 'vermouth/data/force_fields/martini30b32/aminoacids.ff' 2022-12-02T16:39:29,725 adding 'vermouth/data/force_fields/martini30b32/citations.bib' 2022-12-02T16:39:29,727 adding 'vermouth/data/force_fields/martini30b32/modifications.ff' 2022-12-02T16:39:29,730 adding 'vermouth/data/force_fields/martini30b32/small_molecules.ff' 2022-12-02T16:39:29,736 adding 'vermouth/data/force_fields/martini30dev/aminoacids.ff' 2022-12-02T16:39:29,739 adding 'vermouth/data/force_fields/martini30dev/citations.bib' 2022-12-02T16:39:29,742 adding 'vermouth/data/force_fields/martini30dev/modifications.ff' 2022-12-02T16:39:29,749 adding 'vermouth/data/mappings/ala.charmm36.map' 2022-12-02T16:39:29,751 adding 'vermouth/data/mappings/ala.gromos.map' 2022-12-02T16:39:29,754 adding 'vermouth/data/mappings/arg.charmm36.map' 2022-12-02T16:39:29,757 adding 'vermouth/data/mappings/arg.charmm36.martini22p.map' 2022-12-02T16:39:29,759 adding 'vermouth/data/mappings/arg.gromos.map' 2022-12-02T16:39:29,762 adding 'vermouth/data/mappings/asn.charmm36.map' 2022-12-02T16:39:29,765 adding 'vermouth/data/mappings/asn.charmm36.martini22p.map' 2022-12-02T16:39:29,767 adding 'vermouth/data/mappings/asn.gromos.map' 2022-12-02T16:39:29,770 adding 'vermouth/data/mappings/asp.charmm36.map' 2022-12-02T16:39:29,773 adding 'vermouth/data/mappings/asp.charmm36.martini22p.map' 2022-12-02T16:39:29,775 adding 'vermouth/data/mappings/asp.gromos.map' 2022-12-02T16:39:29,778 adding 'vermouth/data/mappings/asp0.gromos.map' 2022-12-02T16:39:29,781 adding 'vermouth/data/mappings/chol.charmm36.map' 2022-12-02T16:39:29,783 adding 'vermouth/data/mappings/cys.charmm36.map' 2022-12-02T16:39:29,786 adding 'vermouth/data/mappings/cys.gromos.map' 2022-12-02T16:39:29,789 adding 'vermouth/data/mappings/dmpc.charmm36.map' 2022-12-02T16:39:29,793 adding 'vermouth/data/mappings/dopc.charmm36.map' 2022-12-02T16:39:29,797 adding 'vermouth/data/mappings/dppc.charmm36.map' 2022-12-02T16:39:29,800 adding 'vermouth/data/mappings/dppg.charmm36.map' 2022-12-02T16:39:29,803 adding 'vermouth/data/mappings/fmn.gromos.map' 2022-12-02T16:39:29,805 adding 'vermouth/data/mappings/gln.charmm36.map' 2022-12-02T16:39:29,808 adding 'vermouth/data/mappings/gln.charmm36.martini22p.map' 2022-12-02T16:39:29,811 adding 'vermouth/data/mappings/gln.gromos.map' 2022-12-02T16:39:29,813 adding 'vermouth/data/mappings/glu.charmm36.map' 2022-12-02T16:39:29,816 adding 'vermouth/data/mappings/glu.charmm36.martini22p.map' 2022-12-02T16:39:29,818 adding 'vermouth/data/mappings/glu.gromos.map' 2022-12-02T16:39:29,821 adding 'vermouth/data/mappings/glu0.gromos.map' 2022-12-02T16:39:29,823 adding 'vermouth/data/mappings/gly.charmm36.map' 2022-12-02T16:39:29,825 adding 'vermouth/data/mappings/gly.gromos.map' 2022-12-02T16:39:29,828 adding 'vermouth/data/mappings/his.charmm36.map' 2022-12-02T16:39:29,831 adding 'vermouth/data/mappings/his.gromos.map' 2022-12-02T16:39:29,833 adding 'vermouth/data/mappings/hsd.charmm36.map' 2022-12-02T16:39:29,836 adding 'vermouth/data/mappings/hse.charmm36.map' 2022-12-02T16:39:29,839 adding 'vermouth/data/mappings/hsp.charmm36.map' 2022-12-02T16:39:29,841 adding 'vermouth/data/mappings/ile.charmm36.map' 2022-12-02T16:39:29,844 adding 'vermouth/data/mappings/ile.gromos.map' 2022-12-02T16:39:29,846 adding 'vermouth/data/mappings/leu.charmm36.map' 2022-12-02T16:39:29,849 adding 'vermouth/data/mappings/leu.gromos.map' 2022-12-02T16:39:29,852 adding 'vermouth/data/mappings/lys.charmm36.map' 2022-12-02T16:39:29,854 adding 'vermouth/data/mappings/lys.charmm36.martini22p.map' 2022-12-02T16:39:29,857 adding 'vermouth/data/mappings/lys.gromos.map' 2022-12-02T16:39:29,859 adding 'vermouth/data/mappings/met.charmm36.map' 2022-12-02T16:39:29,862 adding 'vermouth/data/mappings/met.gromos.map' 2022-12-02T16:39:29,864 adding 'vermouth/data/mappings/modifications.gromos.mapping' 2022-12-02T16:39:29,867 adding 'vermouth/data/mappings/modifications.mapping' 2022-12-02T16:39:29,870 adding 'vermouth/data/mappings/nad.gromos.map' 2022-12-02T16:39:29,872 adding 'vermouth/data/mappings/phe.charmm36.map' 2022-12-02T16:39:29,875 adding 'vermouth/data/mappings/phe.gromos.map' 2022-12-02T16:39:29,879 adding 'vermouth/data/mappings/popc.charmm36.map' 2022-12-02T16:39:29,882 adding 'vermouth/data/mappings/pope.charmm36.map' 2022-12-02T16:39:29,886 adding 'vermouth/data/mappings/popg.charmm36.map' 2022-12-02T16:39:29,889 adding 'vermouth/data/mappings/pops.charmm36.map' 2022-12-02T16:39:29,892 adding 'vermouth/data/mappings/pro.charmm36.map' 2022-12-02T16:39:29,895 adding 'vermouth/data/mappings/pro.gromos.map' 2022-12-02T16:39:29,897 adding 'vermouth/data/mappings/ser.charmm36.map' 2022-12-02T16:39:29,900 adding 'vermouth/data/mappings/ser.charmm36.martini22p.map' 2022-12-02T16:39:29,902 adding 'vermouth/data/mappings/ser.gromos.map' 2022-12-02T16:39:29,905 adding 'vermouth/data/mappings/thr.charmm36.map' 2022-12-02T16:39:29,907 adding 'vermouth/data/mappings/thr.charmm36.martini22p.map' 2022-12-02T16:39:29,910 adding 'vermouth/data/mappings/thr.gromos.map' 2022-12-02T16:39:29,912 adding 'vermouth/data/mappings/tpp.gromos.map' 2022-12-02T16:39:29,915 adding 'vermouth/data/mappings/trp.charmm36.map' 2022-12-02T16:39:29,917 adding 'vermouth/data/mappings/trp.gromos.map' 2022-12-02T16:39:29,920 adding 'vermouth/data/mappings/tyr.charmm36.map' 2022-12-02T16:39:29,923 adding 'vermouth/data/mappings/tyr.gromos.map' 2022-12-02T16:39:29,925 adding 'vermouth/data/mappings/val.charmm36.map' 2022-12-02T16:39:29,928 adding 'vermouth/data/mappings/val.gromos.map' 2022-12-02T16:39:29,933 adding 'vermouth/data/mappings/elnedyn/ala.charmm36.map' 2022-12-02T16:39:29,935 adding 'vermouth/data/mappings/elnedyn/arg.charmm36.map' 2022-12-02T16:39:29,938 adding 'vermouth/data/mappings/elnedyn/asn.charmm36.map' 2022-12-02T16:39:29,941 adding 'vermouth/data/mappings/elnedyn/asp.charmm36.map' 2022-12-02T16:39:29,944 adding 'vermouth/data/mappings/elnedyn/chol.charmm36.map' 2022-12-02T16:39:29,946 adding 'vermouth/data/mappings/elnedyn/cys.charmm36.map' 2022-12-02T16:39:29,950 adding 'vermouth/data/mappings/elnedyn/dmpc.charmm36.map' 2022-12-02T16:39:29,954 adding 'vermouth/data/mappings/elnedyn/dopc.charmm36.map' 2022-12-02T16:39:29,957 adding 'vermouth/data/mappings/elnedyn/dppc.charmm36.map' 2022-12-02T16:39:29,961 adding 'vermouth/data/mappings/elnedyn/dppg.charmm36.map' 2022-12-02T16:39:29,963 adding 'vermouth/data/mappings/elnedyn/gln.charmm36.map' 2022-12-02T16:39:29,966 adding 'vermouth/data/mappings/elnedyn/glu.charmm36.map' 2022-12-02T16:39:29,969 adding 'vermouth/data/mappings/elnedyn/gly.charmm36.map' 2022-12-02T16:39:29,971 adding 'vermouth/data/mappings/elnedyn/his.charmm36.map' 2022-12-02T16:39:29,974 adding 'vermouth/data/mappings/elnedyn/ile.charmm36.map' 2022-12-02T16:39:29,977 adding 'vermouth/data/mappings/elnedyn/leu.charmm36.map' 2022-12-02T16:39:29,980 adding 'vermouth/data/mappings/elnedyn/lys.charmm36.map' 2022-12-02T16:39:29,982 adding 'vermouth/data/mappings/elnedyn/met.charmm36.map' 2022-12-02T16:39:29,985 adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn21.mapping' 2022-12-02T16:39:29,987 adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn22.mapping' 2022-12-02T16:39:29,990 adding 'vermouth/data/mappings/elnedyn/modifications.elnedyn22p.mapping' 2022-12-02T16:39:29,992 adding 'vermouth/data/mappings/elnedyn/phe.charmm36.map' 2022-12-02T16:39:29,996 adding 'vermouth/data/mappings/elnedyn/popc.charmm36.map' 2022-12-02T16:39:30,000 adding 'vermouth/data/mappings/elnedyn/pope.charmm36.map' 2022-12-02T16:39:30,003 adding 'vermouth/data/mappings/elnedyn/popg.charmm36.map' 2022-12-02T16:39:30,007 adding 'vermouth/data/mappings/elnedyn/pops.charmm36.map' 2022-12-02T16:39:30,010 adding 'vermouth/data/mappings/elnedyn/pro.charmm36.map' 2022-12-02T16:39:30,012 adding 'vermouth/data/mappings/elnedyn/ser.charmm36.map' 2022-12-02T16:39:30,015 adding 'vermouth/data/mappings/elnedyn/thr.charmm36.map' 2022-12-02T16:39:30,018 adding 'vermouth/data/mappings/elnedyn/trp.charmm36.map' 2022-12-02T16:39:30,020 adding 'vermouth/data/mappings/elnedyn/tyr.charmm36.map' 2022-12-02T16:39:30,023 adding 'vermouth/data/mappings/elnedyn/val.charmm36.map' 2022-12-02T16:39:30,027 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/arg.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,030 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/asn.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,032 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/asp.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,035 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/gln.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,038 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/glu.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,041 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/lys.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,043 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/ser.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,046 adding 'vermouth/data/mappings/elnedyn/elnedyn22p/thr.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,051 adding 'vermouth/data/mappings/elnedyn21/ala.charmm36.map' 2022-12-02T16:39:30,053 adding 'vermouth/data/mappings/elnedyn21/arg.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,056 adding 'vermouth/data/mappings/elnedyn21/arg.charmm36.map' 2022-12-02T16:39:30,059 adding 'vermouth/data/mappings/elnedyn21/asn.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,062 adding 'vermouth/data/mappings/elnedyn21/asn.charmm36.map' 2022-12-02T16:39:30,064 adding 'vermouth/data/mappings/elnedyn21/asp.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,067 adding 'vermouth/data/mappings/elnedyn21/asp.charmm36.map' 2022-12-02T16:39:30,070 adding 'vermouth/data/mappings/elnedyn21/cys.charmm36.map' 2022-12-02T16:39:30,072 adding 'vermouth/data/mappings/elnedyn21/gln.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,075 adding 'vermouth/data/mappings/elnedyn21/gln.charmm36.map' 2022-12-02T16:39:30,077 adding 'vermouth/data/mappings/elnedyn21/glu.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,080 adding 'vermouth/data/mappings/elnedyn21/glu.charmm36.map' 2022-12-02T16:39:30,083 adding 'vermouth/data/mappings/elnedyn21/gly.charmm36.map' 2022-12-02T16:39:30,085 adding 'vermouth/data/mappings/elnedyn21/his.charmm36.map' 2022-12-02T16:39:30,088 adding 'vermouth/data/mappings/elnedyn21/ile.charmm36.map' 2022-12-02T16:39:30,091 adding 'vermouth/data/mappings/elnedyn21/leu.charmm36.map' 2022-12-02T16:39:30,093 adding 'vermouth/data/mappings/elnedyn21/lys.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,096 adding 'vermouth/data/mappings/elnedyn21/lys.charmm36.map' 2022-12-02T16:39:30,099 adding 'vermouth/data/mappings/elnedyn21/met.charmm36.map' 2022-12-02T16:39:30,101 adding 'vermouth/data/mappings/elnedyn21/modifications.mapping' 2022-12-02T16:39:30,104 adding 'vermouth/data/mappings/elnedyn21/phe.charmm36.map' 2022-12-02T16:39:30,106 adding 'vermouth/data/mappings/elnedyn21/pro.charmm36.map' 2022-12-02T16:39:30,109 adding 'vermouth/data/mappings/elnedyn21/ser.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,112 adding 'vermouth/data/mappings/elnedyn21/ser.charmm36.map' 2022-12-02T16:39:30,114 adding 'vermouth/data/mappings/elnedyn21/thr.charmm36.elnedyn22p.map' 2022-12-02T16:39:30,117 adding 'vermouth/data/mappings/elnedyn21/thr.charmm36.map' 2022-12-02T16:39:30,120 adding 'vermouth/data/mappings/elnedyn21/trp.charmm36.map' 2022-12-02T16:39:30,123 adding 'vermouth/data/mappings/elnedyn21/tyr.charmm36.map' 2022-12-02T16:39:30,125 adding 'vermouth/data/mappings/elnedyn21/val.charmm36.map' 2022-12-02T16:39:30,132 adding 'vermouth/data/mappings/martini3001/ala.amber.map' 2022-12-02T16:39:30,135 adding 'vermouth/data/mappings/martini3001/ala.charmm36.map' 2022-12-02T16:39:30,137 adding 'vermouth/data/mappings/martini3001/antr.charmm36.map' 2022-12-02T16:39:30,140 adding 'vermouth/data/mappings/martini3001/arg.amber.map' 2022-12-02T16:39:30,143 adding 'vermouth/data/mappings/martini3001/arg.charmm36.map' 2022-12-02T16:39:30,146 adding 'vermouth/data/mappings/martini3001/ash.amber.map' 2022-12-02T16:39:30,148 adding 'vermouth/data/mappings/martini3001/asn.amber.map' 2022-12-02T16:39:30,151 adding 'vermouth/data/mappings/martini3001/asn.charmm36.map' 2022-12-02T16:39:30,154 adding 'vermouth/data/mappings/martini3001/asp.amber.map' 2022-12-02T16:39:30,156 adding 'vermouth/data/mappings/martini3001/asp.charmm36.map' 2022-12-02T16:39:30,159 adding 'vermouth/data/mappings/martini3001/aspp.charmm36.map' 2022-12-02T16:39:30,161 adding 'vermouth/data/mappings/martini3001/bald.charmm36.map' 2022-12-02T16:39:30,164 adding 'vermouth/data/mappings/martini3001/benz.charmm36.map' 2022-12-02T16:39:30,166 adding 'vermouth/data/mappings/martini3001/c3.charmm36.map' 2022-12-02T16:39:30,168 adding 'vermouth/data/mappings/martini3001/chxe.charmm36.map' 2022-12-02T16:39:30,171 adding 'vermouth/data/mappings/martini3001/cpen.charmm36.map' 2022-12-02T16:39:30,173 adding 'vermouth/data/mappings/martini3001/cume.charmm36.map' 2022-12-02T16:39:30,176 adding 'vermouth/data/mappings/martini3001/cys.amber.map' 2022-12-02T16:39:30,178 adding 'vermouth/data/mappings/martini3001/cys.charmm36.map' 2022-12-02T16:39:30,181 adding 'vermouth/data/mappings/martini3001/diol.charmm36.map' 2022-12-02T16:39:30,183 adding 'vermouth/data/mappings/martini3001/diox.charmm36.map' 2022-12-02T16:39:30,186 adding 'vermouth/data/mappings/martini3001/dman.charmm36.map' 2022-12-02T16:39:30,188 adding 'vermouth/data/mappings/martini3001/eben.charmm36.map' 2022-12-02T16:39:30,190 adding 'vermouth/data/mappings/martini3001/fura.charmm36.map' 2022-12-02T16:39:30,193 adding 'vermouth/data/mappings/martini3001/glh.amber.map' 2022-12-02T16:39:30,195 adding 'vermouth/data/mappings/martini3001/gln.amber.map' 2022-12-02T16:39:30,198 adding 'vermouth/data/mappings/martini3001/gln.charmm36.map' 2022-12-02T16:39:30,201 adding 'vermouth/data/mappings/martini3001/glu.amber.map' 2022-12-02T16:39:30,203 adding 'vermouth/data/mappings/martini3001/glu.charmm36.map' 2022-12-02T16:39:30,206 adding 'vermouth/data/mappings/martini3001/glup.charmm36.map' 2022-12-02T16:39:30,209 adding 'vermouth/data/mappings/martini3001/gly.amber.map' 2022-12-02T16:39:30,212 adding 'vermouth/data/mappings/martini3001/gly.charmm36.map' 2022-12-02T16:39:30,214 adding 'vermouth/data/mappings/martini3001/hid.amber.map' 2022-12-02T16:39:30,217 adding 'vermouth/data/mappings/martini3001/hie.amber.map' 2022-12-02T16:39:30,219 adding 'vermouth/data/mappings/martini3001/hip.amber.map' 2022-12-02T16:39:30,222 adding 'vermouth/data/mappings/martini3001/his.amber.map' 2022-12-02T16:39:30,225 adding 'vermouth/data/mappings/martini3001/his.charmm36.map' 2022-12-02T16:39:30,227 adding 'vermouth/data/mappings/martini3001/hsd.charmm36.map' 2022-12-02T16:39:30,230 adding 'vermouth/data/mappings/martini3001/hse.charmm36.map' 2022-12-02T16:39:30,233 adding 'vermouth/data/mappings/martini3001/hsp.charmm36.map' 2022-12-02T16:39:30,235 adding 'vermouth/data/mappings/martini3001/ile.amber.map' 2022-12-02T16:39:30,238 adding 'vermouth/data/mappings/martini3001/ile.charmm36.map' 2022-12-02T16:39:30,241 adding 'vermouth/data/mappings/martini3001/imia.charmm36.map' 2022-12-02T16:39:30,243 adding 'vermouth/data/mappings/martini3001/inda.charmm36.map' 2022-12-02T16:39:30,245 adding 'vermouth/data/mappings/martini3001/indo.charmm36.map' 2022-12-02T16:39:30,248 adding 'vermouth/data/mappings/martini3001/leu.amber.map' 2022-12-02T16:39:30,251 adding 'vermouth/data/mappings/martini3001/leu.charmm36.map' 2022-12-02T16:39:30,253 adding 'vermouth/data/mappings/martini3001/lsn.charmm36.map' 2022-12-02T16:39:30,256 adding 'vermouth/data/mappings/martini3001/lyn.amber.map' 2022-12-02T16:39:30,258 adding 'vermouth/data/mappings/martini3001/lys.amber.map' 2022-12-02T16:39:30,261 adding 'vermouth/data/mappings/martini3001/lys.charmm36.map' 2022-12-02T16:39:30,263 adding 'vermouth/data/mappings/martini3001/mboa.charmm36.map' 2022-12-02T16:39:30,266 adding 'vermouth/data/mappings/martini3001/mcpe.charmm36.map' 2022-12-02T16:39:30,268 adding 'vermouth/data/mappings/martini3001/meob.charmm36.map' 2022-12-02T16:39:30,271 adding 'vermouth/data/mappings/martini3001/met.amber.map' 2022-12-02T16:39:30,274 adding 'vermouth/data/mappings/martini3001/met.charmm36.map' 2022-12-02T16:39:30,276 adding 'vermouth/data/mappings/martini3001/mind.charmm36.map' 2022-12-02T16:39:30,279 adding 'vermouth/data/mappings/martini3001/modifications.amber.mapping' 2022-12-02T16:39:30,281 adding 'vermouth/data/mappings/martini3001/modifications.charmm36.mapping' 2022-12-02T16:39:30,284 adding 'vermouth/data/mappings/martini3001/mxyl.charmm36.map' 2022-12-02T16:39:30,286 adding 'vermouth/data/mappings/martini3001/naft.charmm36.map' 2022-12-02T16:39:30,288 adding 'vermouth/data/mappings/martini3001/nitb.charmm36.map' 2022-12-02T16:39:30,291 adding 'vermouth/data/mappings/martini3001/oxyl.charmm36.map' 2022-12-02T16:39:30,293 adding 'vermouth/data/mappings/martini3001/pcro.charmm36.map' 2022-12-02T16:39:30,296 adding 'vermouth/data/mappings/martini3001/phe.amber.map' 2022-12-02T16:39:30,299 adding 'vermouth/data/mappings/martini3001/phe.charmm36.map' 2022-12-02T16:39:30,301 adding 'vermouth/data/mappings/martini3001/phen.charmm36.map' 2022-12-02T16:39:30,303 adding 'vermouth/data/mappings/martini3001/phmk.charmm36.map' 2022-12-02T16:39:30,306 adding 'vermouth/data/mappings/martini3001/prld.charmm36.map' 2022-12-02T16:39:30,309 adding 'vermouth/data/mappings/martini3001/pro.amber.map' 2022-12-02T16:39:30,311 adding 'vermouth/data/mappings/martini3001/pro.charmm36.map' 2022-12-02T16:39:30,314 adding 'vermouth/data/mappings/martini3001/pxyl.charmm36.map' 2022-12-02T16:39:30,316 adding 'vermouth/data/mappings/martini3001/pyr1.charmm36.map' 2022-12-02T16:39:30,319 adding 'vermouth/data/mappings/martini3001/pyrd.charmm36.map' 2022-12-02T16:39:30,321 adding 'vermouth/data/mappings/martini3001/pyrl.charmm36.map' 2022-12-02T16:39:30,323 adding 'vermouth/data/mappings/martini3001/pyrm.charmm36.map' 2022-12-02T16:39:30,326 adding 'vermouth/data/mappings/martini3001/qinl.charmm36.map' 2022-12-02T16:39:30,329 adding 'vermouth/data/mappings/martini3001/ser.amber.map' 2022-12-02T16:39:30,331 adding 'vermouth/data/mappings/martini3001/ser.charmm36.map' 2022-12-02T16:39:30,334 adding 'vermouth/data/mappings/martini3001/sm139.charmm36.map' 2022-12-02T16:39:30,336 adding 'vermouth/data/mappings/martini3001/styr.charmm36.map' 2022-12-02T16:39:30,338 adding 'vermouth/data/mappings/martini3001/thaz.charmm36.map' 2022-12-02T16:39:30,341 adding 'vermouth/data/mappings/martini3001/thf.charmm36.map' 2022-12-02T16:39:30,343 adding 'vermouth/data/mappings/martini3001/thip.charmm36.map' 2022-12-02T16:39:30,346 adding 'vermouth/data/mappings/martini3001/thp.charmm36.map' 2022-12-02T16:39:30,348 adding 'vermouth/data/mappings/martini3001/thr.amber.map' 2022-12-02T16:39:30,351 adding 'vermouth/data/mappings/martini3001/thr.charmm36.map' 2022-12-02T16:39:30,353 adding 'vermouth/data/mappings/martini3001/tolu.charmm36.map' 2022-12-02T16:39:30,356 adding 'vermouth/data/mappings/martini3001/trp.amber.map' 2022-12-02T16:39:30,359 adding 'vermouth/data/mappings/martini3001/trp.charmm36.map' 2022-12-02T16:39:30,361 adding 'vermouth/data/mappings/martini3001/tyr.amber.map' 2022-12-02T16:39:30,364 adding 'vermouth/data/mappings/martini3001/tyr.charmm36.map' 2022-12-02T16:39:30,366 adding 'vermouth/data/mappings/martini3001/val.amber.map' 2022-12-02T16:39:30,369 adding 'vermouth/data/mappings/martini3001/val.charmm36.map' 2022-12-02T16:39:30,371 adding 'vermouth/data/mappings/martini3001/zimi.charmm36.map' 2022-12-02T16:39:30,374 adding 'vermouth/data/mappings/martini3001/zthp.charmm36.map' 2022-12-02T16:39:30,376 adding 'vermouth/data/mappings/martini3001/zthz.charmm36.map' 2022-12-02T16:39:30,381 adding 'vermouth/data/mappings/martini30b32/ala.charmm36.map' 2022-12-02T16:39:30,383 adding 'vermouth/data/mappings/martini30b32/arg.charmm36.map' 2022-12-02T16:39:30,386 adding 'vermouth/data/mappings/martini30b32/asn.charmm36.map' 2022-12-02T16:39:30,389 adding 'vermouth/data/mappings/martini30b32/asp.charmm36.map' 2022-12-02T16:39:30,391 adding 'vermouth/data/mappings/martini30b32/benz.charmm36.map' 2022-12-02T16:39:30,394 adding 'vermouth/data/mappings/martini30b32/cys.charmm36.map' 2022-12-02T16:39:30,396 adding 'vermouth/data/mappings/martini30b32/gln.charmm36.map' 2022-12-02T16:39:30,399 adding 'vermouth/data/mappings/martini30b32/glu.charmm36.map' 2022-12-02T16:39:30,402 adding 'vermouth/data/mappings/martini30b32/gly.charmm36.map' 2022-12-02T16:39:30,404 adding 'vermouth/data/mappings/martini30b32/his.charmm36.map' 2022-12-02T16:39:30,407 adding 'vermouth/data/mappings/martini30b32/hsd.charmm36.map' 2022-12-02T16:39:30,410 adding 'vermouth/data/mappings/martini30b32/ile.charmm36.map' 2022-12-02T16:39:30,412 adding 'vermouth/data/mappings/martini30b32/leu.charmm36.map' 2022-12-02T16:39:30,415 adding 'vermouth/data/mappings/martini30b32/lys.charmm36.map' 2022-12-02T16:39:30,418 adding 'vermouth/data/mappings/martini30b32/met.charmm36.map' 2022-12-02T16:39:30,420 adding 'vermouth/data/mappings/martini30b32/modifications.mapping' 2022-12-02T16:39:30,423 adding 'vermouth/data/mappings/martini30b32/phe.charmm36.map' 2022-12-02T16:39:30,426 adding 'vermouth/data/mappings/martini30b32/pro.charmm36.map' 2022-12-02T16:39:30,428 adding 'vermouth/data/mappings/martini30b32/ser.charmm36.map' 2022-12-02T16:39:30,431 adding 'vermouth/data/mappings/martini30b32/thr.charmm36.map' 2022-12-02T16:39:30,435 adding 'vermouth/data/mappings/martini30b32/trp.charmm36.map' 2022-12-02T16:39:30,437 adding 'vermouth/data/mappings/martini30b32/tyr.charmm36.map' 2022-12-02T16:39:30,440 adding 'vermouth/data/mappings/martini30b32/val.charmm36.map' 2022-12-02T16:39:30,444 adding 'vermouth/dssp/__init__.py' 2022-12-02T16:39:30,451 adding 'vermouth/dssp/dssp.py' 2022-12-02T16:39:30,455 adding 'vermouth/gmx/__init__.py' 2022-12-02T16:39:30,459 adding 'vermouth/gmx/gro.py' 2022-12-02T16:39:30,463 adding 'vermouth/gmx/itp.py' 2022-12-02T16:39:30,469 adding 'vermouth/gmx/itp_read.py' 2022-12-02T16:39:30,476 adding 'vermouth/gmx/rtp.py' 2022-12-02T16:39:30,482 adding 'vermouth/graphing/grappa.py' 2022-12-02T16:39:30,485 adding 'vermouth/pdb/__init__.py' 2022-12-02T16:39:30,492 adding 'vermouth/pdb/pdb.py' 2022-12-02T16:39:30,497 adding 'vermouth/processors/__init__.py' 2022-12-02T16:39:30,500 adding 'vermouth/processors/add_molecule_edges.py' 2022-12-02T16:39:30,504 adding 'vermouth/processors/annotate_mut_mod.py' 2022-12-02T16:39:30,507 adding 'vermouth/processors/apply_posres.py' 2022-12-02T16:39:30,513 adding 'vermouth/processors/apply_rubber_band.py' 2022-12-02T16:39:30,516 adding 'vermouth/processors/attach_mass.py' 2022-12-02T16:39:30,520 adding 'vermouth/processors/average_beads.py' 2022-12-02T16:39:30,525 adding 'vermouth/processors/canonicalize_modifications.py' 2022-12-02T16:39:30,531 adding 'vermouth/processors/do_links.py' 2022-12-02T16:39:30,542 adding 'vermouth/processors/do_mapping.py' 2022-12-02T16:39:30,546 adding 'vermouth/processors/go_vs_includes.py' 2022-12-02T16:39:30,549 adding 'vermouth/processors/gro_reader.py' 2022-12-02T16:39:30,553 adding 'vermouth/processors/locate_charge_dummies.py' 2022-12-02T16:39:30,558 adding 'vermouth/processors/make_bonds.py' 2022-12-02T16:39:30,561 adding 'vermouth/processors/merge_all_molecules.py' 2022-12-02T16:39:30,564 adding 'vermouth/processors/merge_chains.py' 2022-12-02T16:39:30,567 adding 'vermouth/processors/name_moltype.py' 2022-12-02T16:39:30,570 adding 'vermouth/processors/pdb_reader.py' 2022-12-02T16:39:30,572 adding 'vermouth/processors/processor.py' 2022-12-02T16:39:30,575 adding 'vermouth/processors/quote.py' 2022-12-02T16:39:30,578 adding 'vermouth/processors/rename_modified_residues.py' 2022-12-02T16:39:30,586 adding 'vermouth/processors/repair_graph.py' 2022-12-02T16:39:30,589 adding 'vermouth/processors/set_molecule_meta.py' 2022-12-02T16:39:30,592 adding 'vermouth/processors/sort_molecule_atoms.py' 2022-12-02T16:39:30,594 adding 'vermouth/processors/tune_cystein_bridges.py' 2022-12-02T16:39:30,599 adding 'vermouth/tests/__init__.py' 2022-12-02T16:39:30,602 adding 'vermouth/tests/datafiles.py' 2022-12-02T16:39:30,605 adding 'vermouth/tests/helper_functions.py' 2022-12-02T16:39:30,609 adding 'vermouth/tests/molecule_strategies.py' 2022-12-02T16:39:30,612 adding 'vermouth/tests/test_add_molecule_edges.py' 2022-12-02T16:39:30,616 adding 'vermouth/tests/test_annotate_mut_mod.py' 2022-12-02T16:39:30,621 adding 'vermouth/tests/test_apply_rubber_band.py' 2022-12-02T16:39:30,625 adding 'vermouth/tests/test_average_beads.py' 2022-12-02T16:39:30,631 adding 'vermouth/tests/test_do_mapping.py' 2022-12-02T16:39:30,636 adding 'vermouth/tests/test_dssp.py' 2022-12-02T16:39:30,642 adding 'vermouth/tests/test_edge_tuning.py' 2022-12-02T16:39:30,651 adding 'vermouth/tests/test_ff_files.py' 2022-12-02T16:39:30,658 adding 'vermouth/tests/test_ffinput.py' 2022-12-02T16:39:30,661 adding 'vermouth/tests/test_file_writer.py' 2022-12-02T16:39:30,664 adding 'vermouth/tests/test_forcefield.py' 2022-12-02T16:39:30,668 adding 'vermouth/tests/test_geometry.py' 2022-12-02T16:39:30,671 adding 'vermouth/tests/test_go_vs_includes.py' 2022-12-02T16:39:30,676 adding 'vermouth/tests/test_graph_utils.py' 2022-12-02T16:39:30,680 adding 'vermouth/tests/test_grappa.py' 2022-12-02T16:39:30,685 adding 'vermouth/tests/test_ismags.py' 2022-12-02T16:39:30,690 adding 'vermouth/tests/test_itp_files.py' 2022-12-02T16:39:30,694 adding 'vermouth/tests/test_links.py' 2022-12-02T16:39:30,699 adding 'vermouth/tests/test_logging.py' 2022-12-02T16:39:30,703 adding 'vermouth/tests/test_make_bonds.py' 2022-12-02T16:39:30,708 adding 'vermouth/tests/test_map_input.py' 2022-12-02T16:39:30,713 adding 'vermouth/tests/test_map_parser.py' 2022-12-02T16:39:30,716 adding 'vermouth/tests/test_mapping_integrative.py' 2022-12-02T16:39:30,725 adding 'vermouth/tests/test_molecule.py' 2022-12-02T16:39:30,729 adding 'vermouth/tests/test_name_moltype.py' 2022-12-02T16:39:30,732 adding 'vermouth/tests/test_native_forcefield.py' 2022-12-02T16:39:30,736 adding 'vermouth/tests/test_ptm_detection.py' 2022-12-02T16:39:30,741 adding 'vermouth/tests/test_repair_graph.py' 2022-12-02T16:39:30,744 adding 'vermouth/tests/test_section_parser.py' 2022-12-02T16:39:30,747 adding 'vermouth/tests/test_selectors.py' 2022-12-02T16:39:30,750 adding 'vermouth/tests/test_set_molecule_meta.py' 2022-12-02T16:39:30,753 adding 'vermouth/tests/test_sort_molecule_atoms.py' 2022-12-02T16:39:30,756 adding 'vermouth/tests/test_tune_cystein_bridges.py' 2022-12-02T16:39:30,760 adding 'vermouth/tests/test_utils.py' 2022-12-02T16:39:30,763 adding 'vermouth/tests/test_version.py' 2022-12-02T16:39:30,818 adding 'vermouth/tests/data/1bta.pdb' 2022-12-02T16:39:30,881 adding 'vermouth/tests/data/1bta_mutated.pdb' 2022-12-02T16:39:31,049 adding 'vermouth/tests/data/2QWO.pdb' 2022-12-02T16:39:31,405 adding 'vermouth/tests/data/2dn2.pdb' 2022-12-02T16:39:32,743 adding 'vermouth/tests/data/6E8W.pdb' 2022-12-02T16:39:32,813 adding 'vermouth/tests/data/ala5.pdb' 2022-12-02T16:39:32,816 adding 'vermouth/tests/data/ala5_cg.pdb' 2022-12-02T16:39:32,822 adding 'vermouth/tests/data/dna-short.pdb' 2022-12-02T16:39:32,830 adding 'vermouth/tests/data/dssp_1bta.ssd' 2022-12-02T16:39:32,834 adding 'vermouth/tests/data/heme.pdb' 2022-12-02T16:39:32,837 adding 'vermouth/tests/data/tri_alanine.pdb' 2022-12-02T16:39:32,845 adding 'vermouth/tests/data/force_fields/martini-test/aminoacids.ff' 2022-12-02T16:39:32,850 adding 'vermouth/tests/data/force_fields/pepplane/ala.ff' 2022-12-02T16:39:32,854 adding 'vermouth/tests/data/force_fields/pepplane/general.ff' 2022-12-02T16:39:32,857 adding 'vermouth/tests/data/force_fields/pepplane/modifications.ff' 2022-12-02T16:39:32,866 adding 'vermouth/tests/data/force_fields/universal-test/aminoacids.rtp' 2022-12-02T16:39:32,870 adding 'vermouth/tests/data/force_fields/universal-test/modifications.ff' 2022-12-02T16:39:32,876 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/README' 2022-12-02T16:39:32,880 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/aa.pdb' 2022-12-02T16:39:32,884 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/cg.pdb' 2022-12-02T16:39:32,888 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/citation' 2022-12-02T16:39:32,891 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/command' 2022-12-02T16:39:32,894 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/molecule_0.itp' 2022-12-02T16:39:32,897 adding 'vermouth/tests/data/integration_tests/tier-0/dipro-termini/martinize2/topol.top' 2022-12-02T16:39:32,901 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/README' 2022-12-02T16:39:32,914 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/aa.pdb' 2022-12-02T16:39:32,921 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/cg.pdb' 2022-12-02T16:39:32,926 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/chain_A.ssd' 2022-12-02T16:39:32,929 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/citation' 2022-12-02T16:39:32,932 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/command' 2022-12-02T16:39:32,936 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/molecule_0.itp' 2022-12-02T16:39:32,940 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/screen.output' 2022-12-02T16:39:32,943 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein1_betasheet/martinize2/topol.top' 2022-12-02T16:39:32,947 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/README' 2022-12-02T16:39:32,969 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/aa.pdb' 2022-12-02T16:39:32,976 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/cg.pdb' 2022-12-02T16:39:32,981 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/chain_A.ssd' 2022-12-02T16:39:32,985 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/citation' 2022-12-02T16:39:32,988 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/command' 2022-12-02T16:39:32,994 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/molecule_0.itp' 2022-12-02T16:39:32,997 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/screen.output' 2022-12-02T16:39:33,000 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein2_helix/martinize2/topol.top' 2022-12-02T16:39:33,004 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/README' 2022-12-02T16:39:33,014 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/aa.pdb' 2022-12-02T16:39:33,020 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/cg.pdb' 2022-12-02T16:39:33,024 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/chain_A.ssd' 2022-12-02T16:39:33,027 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/citation' 2022-12-02T16:39:33,030 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/command' 2022-12-02T16:39:33,034 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/molecule_0.itp' 2022-12-02T16:39:33,037 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/screen.output' 2022-12-02T16:39:33,041 adding 'vermouth/tests/data/integration_tests/tier-0/mini-protein3_trp-cage/martinize2/topol.top' 2022-12-02T16:39:33,046 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/README' 2022-12-02T16:39:33,207 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/aa.pdb' 2022-12-02T16:39:33,239 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.pdb' 2022-12-02T16:39:33,244 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/cg.top' 2022-12-02T16:39:33,270 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/chain_.ssd' 2022-12-02T16:39:33,274 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/citation' 2022-12-02T16:39:33,277 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/command' 2022-12-02T16:39:33,327 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/molecule_0.itp' 2022-12-02T16:39:33,333 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5/martinize2/screen.output' 2022-12-02T16:39:33,338 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/README' 2022-12-02T16:39:33,497 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/aa.pdb' 2022-12-02T16:39:33,530 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.pdb' 2022-12-02T16:39:33,534 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/cg.top' 2022-12-02T16:39:33,560 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/chain_.ssd' 2022-12-02T16:39:33,564 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/citation' 2022-12-02T16:39:33,567 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/command' 2022-12-02T16:39:33,617 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/molecule_0.itp' 2022-12-02T16:39:33,623 adding 'vermouth/tests/data/integration_tests/tier-1/1mj5-charmm/martinize2/screen.output' 2022-12-02T16:39:33,646 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/3i40.pdb' 2022-12-02T16:39:33,651 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/README' 2022-12-02T16:39:33,658 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.pdb' 2022-12-02T16:39:33,661 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/cg.top' 2022-12-02T16:39:33,666 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_A.ssd' 2022-12-02T16:39:33,672 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/chain_C.ssd' 2022-12-02T16:39:33,674 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/citation' 2022-12-02T16:39:33,677 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/command' 2022-12-02T16:39:33,684 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/insulin_dimer.itp' 2022-12-02T16:39:33,691 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/molecule_0.itp' 2022-12-02T16:39:33,694 adding 'vermouth/tests/data/integration_tests/tier-1/3i40/martinize2/screen.output' 2022-12-02T16:39:33,766 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/6LFO_gap.pdb' 2022-12-02T16:39:33,771 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/README' 2022-12-02T16:39:33,792 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.pdb' 2022-12-02T16:39:33,796 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/cg.top' 2022-12-02T16:39:33,801 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/chain_R.ssd' 2022-12-02T16:39:33,803 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/citation' 2022-12-02T16:39:33,806 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/command' 2022-12-02T16:39:33,846 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/molecule_0.itp' 2022-12-02T16:39:33,852 adding 'vermouth/tests/data/integration_tests/tier-1/6LFO_gap/martinize2/screen.output' 2022-12-02T16:39:33,855 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/README' 2022-12-02T16:39:33,877 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/aa.pdb' 2022-12-02T16:39:33,884 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.pdb' 2022-12-02T16:39:33,887 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/cg.top' 2022-12-02T16:39:33,892 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/chain_A.ssd' 2022-12-02T16:39:33,895 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/citation' 2022-12-02T16:39:33,897 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/command' 2022-12-02T16:39:33,905 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/molecule_0.itp' 2022-12-02T16:39:33,908 adding 'vermouth/tests/data/integration_tests/tier-1/EN_chain/martinize2/screen.output' 2022-12-02T16:39:33,912 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/README' 2022-12-02T16:39:33,933 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/aa.pdb' 2022-12-02T16:39:33,941 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.pdb' 2022-12-02T16:39:33,943 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/cg.top' 2022-12-02T16:39:33,949 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/chain_A.ssd' 2022-12-02T16:39:33,951 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/citation' 2022-12-02T16:39:33,954 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/command' 2022-12-02T16:39:33,961 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/molecule_0.itp' 2022-12-02T16:39:33,964 adding 'vermouth/tests/data/integration_tests/tier-1/EN_region/martinize2/screen.output' 2022-12-02T16:39:33,967 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/README' 2022-12-02T16:39:33,991 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/aa.pdb' 2022-12-02T16:39:33,999 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/cg.pdb' 2022-12-02T16:39:34,005 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/chain_A.ssd' 2022-12-02T16:39:34,008 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/citation' 2022-12-02T16:39:34,011 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/command' 2022-12-02T16:39:34,019 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/molecule_0.itp' 2022-12-02T16:39:34,023 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/screen.output' 2022-12-02T16:39:34,026 adding 'vermouth/tests/data/integration_tests/tier-1/bpti/martinize2/topol.top' 2022-12-02T16:39:34,030 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/README' 2022-12-02T16:39:34,079 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/aa.pdb' 2022-12-02T16:39:34,093 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/cg.pdb' 2022-12-02T16:39:34,104 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/chain_A.ssd' 2022-12-02T16:39:34,107 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/citation' 2022-12-02T16:39:34,109 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/command' 2022-12-02T16:39:34,128 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/molecule_0.itp' 2022-12-02T16:39:34,133 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/screen.output' 2022-12-02T16:39:34,152 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/test.itp' 2022-12-02T16:39:34,156 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme/martinize2/topol.top' 2022-12-02T16:39:34,160 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/README' 2022-12-02T16:39:34,209 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/aa.pdb' 2022-12-02T16:39:34,223 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/cg.pdb' 2022-12-02T16:39:34,234 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/chain_A.ssd' 2022-12-02T16:39:34,237 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/citation' 2022-12-02T16:39:34,240 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/command' 2022-12-02T16:39:34,260 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/molecule_0.itp' 2022-12-02T16:39:34,264 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/screen.output' 2022-12-02T16:39:34,283 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/test.itp' 2022-12-02T16:39:34,286 adding 'vermouth/tests/data/integration_tests/tier-1/lysozyme_prot/martinize2/topol.top' 2022-12-02T16:39:34,290 adding 'vermouth/tests/data/integration_tests/tier-1/villin/README' 2022-12-02T16:39:34,299 adding 'vermouth/tests/data/integration_tests/tier-1/villin/aa.pdb' 2022-12-02T16:39:34,306 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/cg.pdb' 2022-12-02T16:39:34,308 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/citation' 2022-12-02T16:39:34,311 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/command' 2022-12-02T16:39:34,315 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/molecule_0.itp' 2022-12-02T16:39:34,318 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/screen.output' 2022-12-02T16:39:34,321 adding 'vermouth/tests/data/integration_tests/tier-1/villin/martinize2/topol.top' 2022-12-02T16:39:34,326 adding 'vermouth/tests/data/mappings/universal-test/martini-test/ser.mapping' 2022-12-02T16:39:34,330 adding 'vermouth/tests/data/mappings/universal-test/pepplane/ala.mapping' 2022-12-02T16:39:34,333 adding 'vermouth/tests/data/mappings/universal-test/pepplane/modifications.mapping' 2022-12-02T16:39:34,340 adding 'vermouth/tests/gmx/test_gro.py' 2022-12-02T16:39:34,344 adding 'vermouth/tests/gmx/test_itp.py' 2022-12-02T16:39:34,347 adding 'vermouth/tests/integration_tests/__init__.py' 2022-12-02T16:39:34,351 adding 'vermouth/tests/integration_tests/test_integration.py' 2022-12-02T16:39:34,356 adding 'vermouth/tests/pdb/test_read_pdb.py' 2022-12-02T16:39:34,359 adding 'vermouth/tests/pdb/test_write_pdb.py' 2022-12-02T16:39:34,372 adding 'vermouth-0.8.1.data/scripts/martinize2' 2022-12-02T16:39:34,380 adding 'vermouth-0.8.1.dist-info/LICENSE' 2022-12-02T16:39:34,383 adding 'vermouth-0.8.1.dist-info/METADATA' 2022-12-02T16:39:34,386 adding 'vermouth-0.8.1.dist-info/WHEEL' 2022-12-02T16:39:34,387 adding 'vermouth-0.8.1.dist-info/pbr.json' 2022-12-02T16:39:34,389 adding 'vermouth-0.8.1.dist-info/top_level.txt' 2022-12-02T16:39:34,412 adding 'vermouth-0.8.1.dist-info/RECORD' 2022-12-02T16:39:34,533 removing build/bdist.linux-armv7l/wheel 2022-12-02T16:39:34,824 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.data.mappings' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:34,825 !! 2022-12-02T16:39:34,826 ############################ 2022-12-02T16:39:34,826 # Package would be ignored # 2022-12-02T16:39:34,827 ############################ 2022-12-02T16:39:34,827 Python recognizes 'vermouth.tests.data.mappings' as an importable package, 2022-12-02T16:39:34,827 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:34,828 'vermouth.tests.data.mappings' has been automatically added to the distribution only 2022-12-02T16:39:34,828 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:34,829 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:34,829 Please make sure that 'vermouth.tests.data.mappings' is included as a package by using 2022-12-02T16:39:34,830 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:34,830 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:34,830 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:34,831 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:34,831 documentation page. 2022-12-02T16:39:34,832 !! 2022-12-02T16:39:34,833 check.warn(importable) 2022-12-02T16:39:34,833 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.gmx' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:34,834 !! 2022-12-02T16:39:34,834 ############################ 2022-12-02T16:39:34,835 # Package would be ignored # 2022-12-02T16:39:34,835 ############################ 2022-12-02T16:39:34,835 Python recognizes 'vermouth.tests.gmx' as an importable package, 2022-12-02T16:39:34,836 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:34,837 'vermouth.tests.gmx' has been automatically added to the distribution only 2022-12-02T16:39:34,837 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:34,837 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:34,838 Please make sure that 'vermouth.tests.gmx' is included as a package by using 2022-12-02T16:39:34,839 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:34,839 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:34,839 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:34,840 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:34,841 documentation page. 2022-12-02T16:39:34,842 !! 2022-12-02T16:39:34,843 check.warn(importable) 2022-12-02T16:39:34,843 /tmp/pip-build-env-gmlktjeg/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'vermouth.tests.pdb' as data is deprecated, please list it in `packages`. 2022-12-02T16:39:34,844 !! 2022-12-02T16:39:34,845 ############################ 2022-12-02T16:39:34,845 # Package would be ignored # 2022-12-02T16:39:34,846 ############################ 2022-12-02T16:39:34,846 Python recognizes 'vermouth.tests.pdb' as an importable package, 2022-12-02T16:39:34,847 but it is not listed in the `packages` configuration of setuptools. 2022-12-02T16:39:34,847 'vermouth.tests.pdb' has been automatically added to the distribution only 2022-12-02T16:39:34,848 because it may contain data files, but this behavior is likely to change 2022-12-02T16:39:34,848 in future versions of setuptools (and therefore is considered deprecated). 2022-12-02T16:39:34,849 Please make sure that 'vermouth.tests.pdb' is included as a package by using 2022-12-02T16:39:34,850 the `packages` configuration field or the proper discovery methods 2022-12-02T16:39:34,850 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-02T16:39:34,851 instead of `find_packages(...)`/`find:`). 2022-12-02T16:39:34,852 You can read more about "package discovery" and "data files" on setuptools 2022-12-02T16:39:34,852 documentation page. 2022-12-02T16:39:34,853 !! 2022-12-02T16:39:34,854 check.warn(importable) 2022-12-02T16:39:35,080 Building wheel for vermouth (pyproject.toml): finished with status 'done' 2022-12-02T16:39:35,244 Created wheel for vermouth: filename=vermouth-0.8.1-py2.py3-none-any.whl size=2657403 sha256=f0c9d27ed8796568f7aa9dd2294d10d07fa0f27764ebc2d85ce2715ec2c6a5e5 2022-12-02T16:39:35,246 Stored in directory: /tmp/pip-ephem-wheel-cache-rbz8z_ga/wheels/2c/f4/3c/39aaa859e7803e97f5223e6e43435a10bb4b2dd49f43e0dd68 2022-12-02T16:39:35,319 Successfully built vermouth 2022-12-02T16:39:35,532 Removed build tracker: '/tmp/pip-build-tracker-r4t9d4dg'