2022-12-03T01:38:12,872 Created temporary directory: /tmp/pip-ephem-wheel-cache-_n7hnxiv 2022-12-03T01:38:12,876 Created temporary directory: /tmp/pip-build-tracker-1x6n8ksc 2022-12-03T01:38:12,877 Initialized build tracking at /tmp/pip-build-tracker-1x6n8ksc 2022-12-03T01:38:12,877 Created build tracker: /tmp/pip-build-tracker-1x6n8ksc 2022-12-03T01:38:12,878 Entered build tracker: /tmp/pip-build-tracker-1x6n8ksc 2022-12-03T01:38:12,879 Created temporary directory: /tmp/pip-wheel-kallci7j 2022-12-03T01:38:12,887 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-03T01:38:12,892 Created temporary directory: /tmp/pip-ephem-wheel-cache-tr3j1nx8 2022-12-03T01:38:12,949 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-03T01:38:12,957 2 location(s) to search for versions of jbrowse-jupyter: 2022-12-03T01:38:12,957 * https://pypi.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:12,957 * https://www.piwheels.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:12,958 Fetching project page and analyzing links: https://pypi.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:12,959 Getting page https://pypi.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:12,962 Found index url https://pypi.org/simple 2022-12-03T01:38:13,157 Fetched page https://pypi.org/simple/jbrowse-jupyter/ as application/vnd.pypi.simple.v1+json 2022-12-03T01:38:13,181 Found link 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https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.3.2-py3-none-any.whl#sha256=42913816dd97cc31d9f2fe14538f9d1c7e6bf310fcb2052098cbf0d848a88d96 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,456 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.3.0-py3-none-any.whl#sha256=63738bcb6a1ea445fc118574f10b745fbe521571721b8a3bc07ebcdb45a22850 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,457 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.9-py3-none-any.whl#sha256=d76c4f289d8aee0f78f60454dceb26ff7533b4d2652679c3483b4c49c0556bab (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,457 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.7-py3-none-any.whl#sha256=86eebe800912a7c62cf436915f861938206633a7d6b0376256e8a4be3e990986 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,458 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.6-py3-none-any.whl#sha256=826141b322752c3d507c094de2e04ed72efc4f8cb09d972c983308c2acf67540 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,458 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.5-py3-none-any.whl#sha256=ecdf73ae2e5e08156ab60fe414e151747102f53dd94577699998bd9d484c8f71 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,459 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.4-py3-none-any.whl#sha256=98e5d40778e1ab4ed9d3fd9e957f4470662ef54671fc3846b9d457f438184b0a (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,460 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.3-py3-none-any.whl#sha256=443d7996b909275d81db65f97f971dc2ec4828bc8a8e6cbe49c58f6d98c4f7bd (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,460 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.2-py3-none-any.whl#sha256=5d0e822ff86a734f12f7f798ab7e41e1574524026ce862bb4509db351b960875 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,461 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.2.1-py3-none-any.whl#sha256=3ff9daad0eb07fb9040e37933823d4a2c23a84ef28750dc8ac72b28bb3b5a53f (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,461 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.1.1-py3-none-any.whl#sha256=15ef92e5a7748ca3dea8c703070b83b878db1cc9bf72005290abef74286c1b64 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,462 Skipping link: No binaries permitted for jbrowse-jupyter: https://www.piwheels.org/simple/jbrowse-jupyter/jbrowse_jupyter-1.0.0-py3-none-any.whl#sha256=12770fbd0df889e6c9c2ce7751d9361e0863a3ca84b0f7c0ec484c8a32c55545 (from https://www.piwheels.org/simple/jbrowse-jupyter/) (requires-python:>=3.6) 2022-12-03T01:38:13,462 Skipping link: not a file: https://www.piwheels.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:13,463 Skipping link: not a file: https://pypi.org/simple/jbrowse-jupyter/ 2022-12-03T01:38:13,500 Given no hashes to check 1 links for project 'jbrowse-jupyter': discarding no candidates 2022-12-03T01:38:13,530 Collecting jbrowse-jupyter==1.3.6 2022-12-03T01:38:13,535 Created temporary directory: /tmp/pip-unpack-6cmafrqn 2022-12-03T01:38:13,818 Downloading jbrowse-jupyter-1.3.6.tar.gz (35 kB) 2022-12-03T01:38:13,942 Added jbrowse-jupyter==1.3.6 from https://files.pythonhosted.org/packages/5b/2d/9734382ca2b1b6c8f8f1b2f04d4008903985851db20f5080b88de4a04d14/jbrowse-jupyter-1.3.6.tar.gz to build tracker '/tmp/pip-build-tracker-1x6n8ksc' 2022-12-03T01:38:13,946 Running setup.py (path:/tmp/pip-wheel-kallci7j/jbrowse-jupyter_cfab37826f1740d1ae53caea0766f96e/setup.py) egg_info for package jbrowse-jupyter 2022-12-03T01:38:13,947 Created temporary directory: /tmp/pip-pip-egg-info-dmhcb679 2022-12-03T01:38:13,947 Preparing metadata (setup.py): started 2022-12-03T01:38:13,950 Running command python setup.py egg_info 2022-12-03T01:38:16,447 running egg_info 2022-12-03T01:38:16,452 creating /tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info 2022-12-03T01:38:16,512 writing /tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/PKG-INFO 2022-12-03T01:38:16,518 writing dependency_links to /tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/dependency_links.txt 2022-12-03T01:38:16,522 writing requirements to /tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/requires.txt 2022-12-03T01:38:16,524 writing top-level names to /tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/top_level.txt 2022-12-03T01:38:16,526 writing manifest file '/tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/SOURCES.txt' 2022-12-03T01:38:16,716 reading manifest file '/tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/SOURCES.txt' 2022-12-03T01:38:16,719 reading manifest template 'MANIFEST.in' 2022-12-03T01:38:16,728 adding license file 'LICENSE' 2022-12-03T01:38:16,734 writing manifest file '/tmp/pip-pip-egg-info-dmhcb679/jbrowse_jupyter.egg-info/SOURCES.txt' 2022-12-03T01:38:16,939 Preparing metadata (setup.py): finished with status 'done' 2022-12-03T01:38:16,956 Source in /tmp/pip-wheel-kallci7j/jbrowse-jupyter_cfab37826f1740d1ae53caea0766f96e has version 1.3.6, which satisfies requirement jbrowse-jupyter==1.3.6 from https://files.pythonhosted.org/packages/5b/2d/9734382ca2b1b6c8f8f1b2f04d4008903985851db20f5080b88de4a04d14/jbrowse-jupyter-1.3.6.tar.gz 2022-12-03T01:38:16,957 Removed jbrowse-jupyter==1.3.6 from https://files.pythonhosted.org/packages/5b/2d/9734382ca2b1b6c8f8f1b2f04d4008903985851db20f5080b88de4a04d14/jbrowse-jupyter-1.3.6.tar.gz from build tracker '/tmp/pip-build-tracker-1x6n8ksc' 2022-12-03T01:38:16,977 Created temporary directory: /tmp/pip-unpack-mnf237rj 2022-12-03T01:38:16,978 Building wheels for collected packages: jbrowse-jupyter 2022-12-03T01:38:16,987 Created temporary directory: /tmp/pip-wheel-3ncm21mz 2022-12-03T01:38:16,987 Building wheel for jbrowse-jupyter (setup.py): started 2022-12-03T01:38:16,989 Destination directory: /tmp/pip-wheel-3ncm21mz 2022-12-03T01:38:16,990 Running command python setup.py bdist_wheel 2022-12-03T01:38:19,456 running bdist_wheel 2022-12-03T01:38:20,191 running build 2022-12-03T01:38:20,191 running build_py 2022-12-03T01:38:20,258 creating build 2022-12-03T01:38:20,259 creating build/lib 2022-12-03T01:38:20,260 creating build/lib/jbrowse_jupyter 2022-12-03T01:38:20,262 copying jbrowse_jupyter/__init__.py -> build/lib/jbrowse_jupyter 2022-12-03T01:38:20,266 copying jbrowse_jupyter/util.py -> build/lib/jbrowse_jupyter 2022-12-03T01:38:20,270 copying jbrowse_jupyter/tracks.py -> build/lib/jbrowse_jupyter 2022-12-03T01:38:20,275 copying jbrowse_jupyter/jbrowse_config.py -> build/lib/jbrowse_jupyter 2022-12-03T01:38:20,280 copying jbrowse_jupyter/dev_server.py -> build/lib/jbrowse_jupyter 2022-12-03T01:38:20,283 running egg_info 2022-12-03T01:38:20,425 writing jbrowse_jupyter.egg-info/PKG-INFO 2022-12-03T01:38:20,430 writing dependency_links to jbrowse_jupyter.egg-info/dependency_links.txt 2022-12-03T01:38:20,434 writing requirements to jbrowse_jupyter.egg-info/requires.txt 2022-12-03T01:38:20,436 writing top-level names to jbrowse_jupyter.egg-info/top_level.txt 2022-12-03T01:38:20,500 reading manifest file 'jbrowse_jupyter.egg-info/SOURCES.txt' 2022-12-03T01:38:20,505 reading manifest template 'MANIFEST.in' 2022-12-03T01:38:20,513 adding license file 'LICENSE' 2022-12-03T01:38:20,518 writing manifest file 'jbrowse_jupyter.egg-info/SOURCES.txt' 2022-12-03T01:38:20,523 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'jbrowse_jupyter.data' as data is deprecated, please list it in `packages`. 2022-12-03T01:38:20,524 !! 2022-12-03T01:38:20,525 ############################ 2022-12-03T01:38:20,525 # Package would be ignored # 2022-12-03T01:38:20,526 ############################ 2022-12-03T01:38:20,526 Python recognizes 'jbrowse_jupyter.data' as an importable package, 2022-12-03T01:38:20,526 but it is not listed in the `packages` configuration of setuptools. 2022-12-03T01:38:20,527 'jbrowse_jupyter.data' has been automatically added to the distribution only 2022-12-03T01:38:20,527 because it may contain data files, but this behavior is likely to change 2022-12-03T01:38:20,528 in future versions of setuptools (and therefore is considered deprecated). 2022-12-03T01:38:20,528 Please make sure that 'jbrowse_jupyter.data' is included as a package by using 2022-12-03T01:38:20,529 the `packages` configuration field or the proper discovery methods 2022-12-03T01:38:20,529 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-03T01:38:20,529 instead of `find_packages(...)`/`find:`). 2022-12-03T01:38:20,530 You can read more about "package discovery" and "data files" on setuptools 2022-12-03T01:38:20,530 documentation page. 2022-12-03T01:38:20,531 !! 2022-12-03T01:38:20,532 check.warn(importable) 2022-12-03T01:38:20,532 creating build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,533 copying jbrowse_jupyter/data/__init__.py -> build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,533 copying jbrowse_jupyter/data/hg19.json -> build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,535 copying jbrowse_jupyter/data/hg19_cgv.json -> build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,539 copying jbrowse_jupyter/data/hg38.json -> build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,543 copying jbrowse_jupyter/data/hg38_cgv.json -> build/lib/jbrowse_jupyter/data 2022-12-03T01:38:20,615 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-12-03T01:38:20,616 setuptools.SetuptoolsDeprecationWarning, 2022-12-03T01:38:20,678 installing to build/bdist.linux-armv7l/wheel 2022-12-03T01:38:20,679 running install 2022-12-03T01:38:20,741 running install_lib 2022-12-03T01:38:20,806 creating build/bdist.linux-armv7l 2022-12-03T01:38:20,807 creating build/bdist.linux-armv7l/wheel 2022-12-03T01:38:20,810 creating build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,812 copying build/lib/jbrowse_jupyter/__init__.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,815 copying build/lib/jbrowse_jupyter/util.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,819 copying build/lib/jbrowse_jupyter/tracks.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,825 copying build/lib/jbrowse_jupyter/jbrowse_config.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,830 copying build/lib/jbrowse_jupyter/dev_server.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter 2022-12-03T01:38:20,836 creating build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,838 copying build/lib/jbrowse_jupyter/data/__init__.py -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,842 copying build/lib/jbrowse_jupyter/data/hg38.json -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,846 copying build/lib/jbrowse_jupyter/data/hg19.json -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,850 copying build/lib/jbrowse_jupyter/data/hg38_cgv.json -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,854 copying build/lib/jbrowse_jupyter/data/hg19_cgv.json -> build/bdist.linux-armv7l/wheel/jbrowse_jupyter/data 2022-12-03T01:38:20,857 running install_egg_info 2022-12-03T01:38:20,931 Copying jbrowse_jupyter.egg-info to build/bdist.linux-armv7l/wheel/jbrowse_jupyter-1.3.6-py3.7.egg-info 2022-12-03T01:38:20,952 running install_scripts 2022-12-03T01:38:21,165 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-12-03T01:38:21,175 creating build/bdist.linux-armv7l/wheel/jbrowse_jupyter-1.3.6.dist-info/WHEEL 2022-12-03T01:38:21,180 creating '/tmp/pip-wheel-3ncm21mz/jbrowse_jupyter-1.3.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-03T01:38:21,185 adding 'jbrowse_jupyter/__init__.py' 2022-12-03T01:38:21,189 adding 'jbrowse_jupyter/dev_server.py' 2022-12-03T01:38:21,197 adding 'jbrowse_jupyter/jbrowse_config.py' 2022-12-03T01:38:21,203 adding 'jbrowse_jupyter/tracks.py' 2022-12-03T01:38:21,207 adding 'jbrowse_jupyter/util.py' 2022-12-03T01:38:21,211 adding 'jbrowse_jupyter/data/__init__.py' 2022-12-03T01:38:21,214 adding 'jbrowse_jupyter/data/hg19.json' 2022-12-03T01:38:21,217 adding 'jbrowse_jupyter/data/hg19_cgv.json' 2022-12-03T01:38:21,220 adding 'jbrowse_jupyter/data/hg38.json' 2022-12-03T01:38:21,223 adding 'jbrowse_jupyter/data/hg38_cgv.json' 2022-12-03T01:38:21,230 adding 'jbrowse_jupyter-1.3.6.dist-info/LICENSE' 2022-12-03T01:38:21,239 adding 'jbrowse_jupyter-1.3.6.dist-info/METADATA' 2022-12-03T01:38:21,242 adding 'jbrowse_jupyter-1.3.6.dist-info/WHEEL' 2022-12-03T01:38:21,244 adding 'jbrowse_jupyter-1.3.6.dist-info/top_level.txt' 2022-12-03T01:38:21,247 adding 'jbrowse_jupyter-1.3.6.dist-info/RECORD' 2022-12-03T01:38:21,250 removing build/bdist.linux-armv7l/wheel 2022-12-03T01:38:21,507 Building wheel for jbrowse-jupyter (setup.py): finished with status 'done' 2022-12-03T01:38:21,515 Created wheel for jbrowse-jupyter: filename=jbrowse_jupyter-1.3.6-py3-none-any.whl size=30187 sha256=11c43d4728ee776ed2832bcfbffbb1f0868ecab3f0e078cd7f471c0301adb8e9 2022-12-03T01:38:21,517 Stored in directory: /tmp/pip-ephem-wheel-cache-tr3j1nx8/wheels/6c/d6/ff/eae964e553236d8079f0677f2919458da49e353205af6c27e6 2022-12-03T01:38:21,550 Successfully built jbrowse-jupyter 2022-12-03T01:38:21,558 Removed build tracker: '/tmp/pip-build-tracker-1x6n8ksc'