2022-12-09T22:13:00,636 Created temporary directory: /tmp/pip-ephem-wheel-cache-5imn805x 2022-12-09T22:13:00,639 Created temporary directory: /tmp/pip-build-tracker-kon1kk21 2022-12-09T22:13:00,639 Initialized build tracking at /tmp/pip-build-tracker-kon1kk21 2022-12-09T22:13:00,639 Created build tracker: /tmp/pip-build-tracker-kon1kk21 2022-12-09T22:13:00,639 Entered build tracker: /tmp/pip-build-tracker-kon1kk21 2022-12-09T22:13:00,640 Created temporary directory: /tmp/pip-wheel-r61swfcj 2022-12-09T22:13:00,643 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-09T22:13:00,646 Created temporary directory: /tmp/pip-ephem-wheel-cache-w2rbb213 2022-12-09T22:13:00,672 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-09T22:13:00,675 2 location(s) to search for versions of scikit-bio: 2022-12-09T22:13:00,675 * https://pypi.org/simple/scikit-bio/ 2022-12-09T22:13:00,675 * https://www.piwheels.org/simple/scikit-bio/ 2022-12-09T22:13:00,676 Fetching project page and analyzing links: https://pypi.org/simple/scikit-bio/ 2022-12-09T22:13:00,676 Getting page https://pypi.org/simple/scikit-bio/ 2022-12-09T22:13:00,677 Found index url https://pypi.org/simple 2022-12-09T22:13:00,731 Fetched page https://pypi.org/simple/scikit-bio/ as application/vnd.pypi.simple.v1+json 2022-12-09T22:13:00,736 Found link https://files.pythonhosted.org/packages/e0/4f/9e53704ce04a5e60511449a5e16511c6e20219ed0932e4aeea84fe2189fd/scikit-bio-0.1.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.0 2022-12-09T22:13:00,736 Found link https://files.pythonhosted.org/packages/91/8b/ea20137d6b84808b3dd6a7ad162dd80dcda40934428824d1ce87b8983b81/scikit-bio-0.1.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.1 2022-12-09T22:13:00,736 Found link https://files.pythonhosted.org/packages/5f/6e/adc704fa25e9789bfc17882261010320ea9c6148d9d2e28083a5e57a3e9f/scikit-bio-0.1.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.2 2022-12-09T22:13:00,737 Found link https://files.pythonhosted.org/packages/da/03/82ad31dc38265135b432b34b2cec0680fee841e0bdc5f90b5a4596beafb3/scikit-bio-0.1.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.3 2022-12-09T22:13:00,737 Found link https://files.pythonhosted.org/packages/b0/70/92b5bb9fc66ef4d54e1bf67626bda04a41ed723b5eb25c018154728e2b26/scikit-bio-0.1.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.4 2022-12-09T22:13:00,737 Found link https://files.pythonhosted.org/packages/5f/21/c6879978a222a04f1ac1b0a535a18111c84367ee22a5c93e6c0503f57e01/scikit-bio-0.1.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.1.5 2022-12-09T22:13:00,738 Found link https://files.pythonhosted.org/packages/99/76/0c0bd2d6d9973a001477535c68772ff35f543324e36afe21c4f7d6721327/scikit-bio-0.2.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.0 2022-12-09T22:13:00,738 Found link https://files.pythonhosted.org/packages/7b/74/77cf9b45ea0df4d3b8c3adcbd6f59e0b0603d1a3a2fed1b1ae6365232ac6/scikit-bio-0.2.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.1 2022-12-09T22:13:00,738 Found link https://files.pythonhosted.org/packages/bd/0a/6a5906fd53616c0763c5f445b5dc42907720f344318a1f07627986d22f33/scikit-bio-0.2.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.2 2022-12-09T22:13:00,738 Found link https://files.pythonhosted.org/packages/8e/70/559566c9dbde9435360058c420a819b4e8ce844f7ebd94daec9836f4be24/scikit-bio-0.2.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.2.3 2022-12-09T22:13:00,739 Found link https://files.pythonhosted.org/packages/d9/cb/c4684ce5c521de96411c2b88255feb45077e0b2df7ebbdf946abe5caaf25/scikit-bio-0.4.0.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.0 2022-12-09T22:13:00,739 Found link https://files.pythonhosted.org/packages/12/02/81edd2941d892cb4d0144be716c341b9a6fd255046c08d1b7bd6c70a0112/scikit-bio-0.4.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.1 2022-12-09T22:13:00,739 Found link https://files.pythonhosted.org/packages/a8/87/23635a6a9b6a1abdf78ccfc1e71929570be4c4ab4004eab66da9dd4a5c6a/scikit-bio-0.4.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.4.2 2022-12-09T22:13:00,740 Found link https://files.pythonhosted.org/packages/95/60/f4c269a6dfaf9d027adba6a81497e5d238cf5e604f53206b4ea50ed1145f/scikit-bio-0.5.0.zip (from https://pypi.org/simple/scikit-bio/), version: 0.5.0 2022-12-09T22:13:00,740 Found link https://files.pythonhosted.org/packages/e5/7e/cf03a7e53da18ae6a847894384838e9a36a98b48909a3f347ff6077c7304/scikit-bio-0.5.1.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.1 2022-12-09T22:13:00,740 Found link https://files.pythonhosted.org/packages/98/ee/08995b89efccf2bf8a0307a1eb7825dceb199e64a3db24cec832c0ca0baf/scikit-bio-0.5.2.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.2 2022-12-09T22:13:00,740 Found link https://files.pythonhosted.org/packages/39/07/4e3bcf7a7c254154ac445684d5f646ccc4a6ce6bfc3b0cc8030136215b8a/scikit-bio-0.5.3.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.3 2022-12-09T22:13:00,741 Found link https://files.pythonhosted.org/packages/ed/e0/3ae790c5c260be0968a6d41108e35f327365e5460c9d8672714fd136817d/scikit-bio-0.5.4.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.4 2022-12-09T22:13:00,741 Found link https://files.pythonhosted.org/packages/2d/ff/3a909ae8c212305846f7e87f86f3902408b55b958eccedf5d4349e76c671/scikit-bio-0.5.5.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.5 2022-12-09T22:13:00,741 Found link https://files.pythonhosted.org/packages/66/b0/054ef21e024d24422882958072973cd192b492e004a3ce4e9614ef173d9b/scikit-bio-0.5.6.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.6 2022-12-09T22:13:00,741 Found link https://files.pythonhosted.org/packages/8c/a4/6ec875ba9a56f7705529aecc745ca3eaee6d90b87cd103281be7a032b412/scikit-bio-0.5.7.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.7 2022-12-09T22:13:00,742 Found link https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz (from https://pypi.org/simple/scikit-bio/), version: 0.5.8 2022-12-09T22:13:00,742 Fetching project page and analyzing links: https://www.piwheels.org/simple/scikit-bio/ 2022-12-09T22:13:00,742 Getting page https://www.piwheels.org/simple/scikit-bio/ 2022-12-09T22:13:00,743 Found index url https://www.piwheels.org/simple 2022-12-09T22:13:00,907 Fetched page https://www.piwheels.org/simple/scikit-bio/ as text/html 2022-12-09T22:13:00,910 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,910 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=6569ab2696b41bc41ae4e94547d0acd136512dab7753942df12b06931a5ed810 (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,910 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,910 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=1fc89935500ef73303aef4292735583d83456271b51534e31497a2d5eb2b8d3b (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,911 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,911 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=fb1f612aaab958a170d467b2c9a6c1c6c2249bce52c095b7d7b7d8cc07c9ce31 (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,911 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv7l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,911 Skipping link: No binaries permitted for scikit-bio: https://www.piwheels.org/simple/scikit-bio/scikit_bio-0.5.7-cp35-cp35m-linux_armv6l.whl#sha256=3527865d97cf75cd55785b872d6e479bc2ee03250f6b71b9cc2d4a819d69c64c (from https://www.piwheels.org/simple/scikit-bio/) 2022-12-09T22:13:00,911 Skipping link: not a file: https://www.piwheels.org/simple/scikit-bio/ 2022-12-09T22:13:00,912 Skipping link: not a file: https://pypi.org/simple/scikit-bio/ 2022-12-09T22:13:00,933 Given no hashes to check 1 links for project 'scikit-bio': discarding no candidates 2022-12-09T22:13:00,949 Collecting scikit-bio==0.5.8 2022-12-09T22:13:00,952 Created temporary directory: /tmp/pip-unpack-vd9myiwu 2022-12-09T22:13:01,008 Downloading scikit-bio-0.5.8.tar.gz (3.5 MB) 2022-12-09T22:13:02,972 Added scikit-bio==0.5.8 from https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz to build tracker '/tmp/pip-build-tracker-kon1kk21' 2022-12-09T22:13:02,978 Created temporary directory: /tmp/pip-build-env-jr78org0 2022-12-09T22:13:02,985 Installing build dependencies: started 2022-12-09T22:13:02,986 Running command pip subprocess to install build dependencies 2022-12-09T22:13:04,181 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-12-09T22:13:04,579 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-09T22:13:04,604 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-09T22:13:06,128 Collecting Cython>=0.29.32 2022-12-09T22:13:06,621 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.32-cp39-cp39-linux_armv7l.whl (5.0 MB) 2022-12-09T22:13:08,205 Collecting numpy>=1.9.2 2022-12-09T22:13:09,418 Using cached https://www.piwheels.org/simple/numpy/numpy-1.23.5-cp39-cp39-linux_armv7l.whl (12.4 MB) 2022-12-09T22:13:11,197 Collecting setuptools 2022-12-09T22:13:11,338 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-09T22:13:11,608 Collecting wheel 2022-12-09T22:13:11,640 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-09T22:13:13,661 Installing collected packages: wheel, setuptools, numpy, Cython 2022-12-09T22:13:13,815 Creating /tmp/pip-build-env-jr78org0/overlay/bin 2022-12-09T22:13:13,818 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/wheel to 755 2022-12-09T22:13:25,090 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/f2py to 755 2022-12-09T22:13:25,092 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/f2py3 to 755 2022-12-09T22:13:25,094 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/f2py3.9 to 755 2022-12-09T22:13:27,930 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/cygdb to 755 2022-12-09T22:13:27,933 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/cython to 755 2022-12-09T22:13:27,936 changing mode of /tmp/pip-build-env-jr78org0/overlay/bin/cythonize to 755 2022-12-09T22:13:27,961 Successfully installed Cython-0.29.32 numpy-1.23.5 setuptools-65.6.3 wheel-0.38.4 2022-12-09T22:13:27,976 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-09T22:13:27,977 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-09T22:13:28,355 Installing build dependencies: finished with status 'done' 2022-12-09T22:13:28,368 Getting requirements to build wheel: started 2022-12-09T22:13:28,369 Running command Getting requirements to build wheel 2022-12-09T22:13:29,563 running egg_info 2022-12-09T22:13:29,570 writing scikit_bio.egg-info/PKG-INFO 2022-12-09T22:13:29,572 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2022-12-09T22:13:29,575 writing requirements to scikit_bio.egg-info/requires.txt 2022-12-09T22:13:29,576 writing top-level names to scikit_bio.egg-info/top_level.txt 2022-12-09T22:13:30,011 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:13:30,038 reading manifest template 'MANIFEST.in' 2022-12-09T22:13:30,087 no previously-included directories found matching 'doc/build' 2022-12-09T22:13:30,089 no previously-included directories found matching 'doc/source/generated' 2022-12-09T22:13:30,094 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-12-09T22:13:30,099 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-12-09T22:13:30,103 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-12-09T22:13:30,108 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-12-09T22:13:30,112 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-12-09T22:13:30,112 adding license file 'LICENSE.txt' 2022-12-09T22:13:30,163 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:13:30,329 Getting requirements to build wheel: finished with status 'done' 2022-12-09T22:13:30,340 Created temporary directory: /tmp/pip-modern-metadata-xgm8wug6 2022-12-09T22:13:30,343 Preparing metadata (pyproject.toml): started 2022-12-09T22:13:30,344 Running command Preparing metadata (pyproject.toml) 2022-12-09T22:13:31,427 running dist_info 2022-12-09T22:13:31,449 creating /tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info 2022-12-09T22:13:31,456 writing /tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/PKG-INFO 2022-12-09T22:13:31,458 writing dependency_links to /tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/dependency_links.txt 2022-12-09T22:13:31,461 writing requirements to /tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/requires.txt 2022-12-09T22:13:31,462 writing top-level names to /tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/top_level.txt 2022-12-09T22:13:31,464 writing manifest file '/tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:13:31,845 reading manifest file '/tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:13:31,849 reading manifest template 'MANIFEST.in' 2022-12-09T22:13:31,894 no previously-included directories found matching 'doc/build' 2022-12-09T22:13:31,896 no previously-included directories found matching 'doc/source/generated' 2022-12-09T22:13:31,899 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-12-09T22:13:31,903 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-12-09T22:13:31,906 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-12-09T22:13:31,909 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-12-09T22:13:31,912 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-12-09T22:13:31,912 adding license file 'LICENSE.txt' 2022-12-09T22:13:31,951 writing manifest file '/tmp/pip-modern-metadata-xgm8wug6/scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:13:31,953 creating '/tmp/pip-modern-metadata-xgm8wug6/scikit_bio-0.5.8.dist-info' 2022-12-09T22:13:32,203 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-09T22:13:32,211 Source in /tmp/pip-wheel-r61swfcj/scikit-bio_37731d6647704bcb8039bb39307b17b8 has version 0.5.8, which satisfies requirement scikit-bio==0.5.8 from https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz 2022-12-09T22:13:32,212 Removed scikit-bio==0.5.8 from https://files.pythonhosted.org/packages/f3/5b/7ae2c3cca0cee7825a24b9c68d7ba0893ef816c41e43aeccf9ca3bc63cb7/scikit-bio-0.5.8.tar.gz from build tracker '/tmp/pip-build-tracker-kon1kk21' 2022-12-09T22:13:32,217 Created temporary directory: /tmp/pip-unpack-nxq60v8v 2022-12-09T22:13:32,218 Building wheels for collected packages: scikit-bio 2022-12-09T22:13:32,223 Created temporary directory: /tmp/pip-wheel-8ovmzpam 2022-12-09T22:13:32,223 Destination directory: /tmp/pip-wheel-8ovmzpam 2022-12-09T22:13:32,228 Building wheel for scikit-bio (pyproject.toml): started 2022-12-09T22:13:32,229 Running command Building wheel for scikit-bio (pyproject.toml) 2022-12-09T22:13:33,336 running bdist_wheel 2022-12-09T22:13:33,636 running build 2022-12-09T22:13:33,636 running build_py 2022-12-09T22:13:33,645 creating build 2022-12-09T22:13:33,646 creating build/lib.linux-armv7l-cpython-39 2022-12-09T22:13:33,647 creating build/lib.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:33,648 copying skbio/_base.py -> build/lib.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:33,650 copying skbio/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:33,652 copying skbio/test.py -> build/lib.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:33,654 copying skbio/workflow.py -> build/lib.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:33,658 creating build/lib.linux-armv7l-cpython-39/skbio/tests 2022-12-09T22:13:33,659 copying skbio/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2022-12-09T22:13:33,661 copying skbio/tests/test_workflow.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2022-12-09T22:13:33,663 copying skbio/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/tests 2022-12-09T22:13:33,666 creating build/lib.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:13:33,667 copying skbio/diversity/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:13:33,670 copying skbio/diversity/_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:13:33,673 copying skbio/diversity/_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:13:33,676 copying skbio/diversity/_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:13:33,679 creating build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,680 copying skbio/util/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,682 copying skbio/util/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,684 copying skbio/util/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,686 copying skbio/util/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,689 copying skbio/util/_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,691 copying skbio/util/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util 2022-12-09T22:13:33,694 creating build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,695 copying skbio/stats/composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,699 copying skbio/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,701 copying skbio/stats/_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,703 copying skbio/stats/_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,705 copying skbio/stats/power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,709 copying skbio/stats/gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:33,713 creating build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,713 copying skbio/metadata/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,716 copying skbio/metadata/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,718 copying skbio/metadata/_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,721 copying skbio/metadata/_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,724 copying skbio/metadata/_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:33,728 creating build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,729 copying skbio/tree/_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,734 copying skbio/tree/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,737 copying skbio/tree/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,739 copying skbio/tree/_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,741 copying skbio/tree/_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree 2022-12-09T22:13:33,745 creating build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,746 copying skbio/io/registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,749 copying skbio/io/_warning.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,751 copying skbio/io/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,754 copying skbio/io/_exception.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,756 copying skbio/io/_fileobject.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,758 copying skbio/io/_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,761 copying skbio/io/util.py -> build/lib.linux-armv7l-cpython-39/skbio/io 2022-12-09T22:13:33,764 creating build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,765 copying skbio/alignment/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,768 copying skbio/alignment/_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,772 copying skbio/alignment/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,774 copying skbio/alignment/_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,777 copying skbio/alignment/_indexing.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:33,781 creating build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,782 copying skbio/sequence/_repr.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,784 copying skbio/sequence/_nucleotide_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,787 copying skbio/sequence/_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,790 copying skbio/sequence/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,792 copying skbio/sequence/distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,795 copying skbio/sequence/_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,798 copying skbio/sequence/_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,801 copying skbio/sequence/_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,803 copying skbio/sequence/_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,808 copying skbio/sequence/_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence 2022-12-09T22:13:33,811 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2022-12-09T22:13:33,812 copying skbio/diversity/tests/test_block.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2022-12-09T22:13:33,815 copying skbio/diversity/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2022-12-09T22:13:33,817 copying skbio/diversity/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2022-12-09T22:13:33,819 copying skbio/diversity/tests/test_driver.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/tests 2022-12-09T22:13:33,823 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,824 copying skbio/diversity/alpha/_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,827 copying skbio/diversity/alpha/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,830 copying skbio/diversity/alpha/_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,833 copying skbio/diversity/alpha/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,835 copying skbio/diversity/alpha/_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,837 copying skbio/diversity/alpha/_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,840 copying skbio/diversity/alpha/_faith_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha 2022-12-09T22:13:33,843 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2022-12-09T22:13:33,843 copying skbio/diversity/beta/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2022-12-09T22:13:33,846 copying skbio/diversity/beta/_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta 2022-12-09T22:13:33,849 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,850 copying skbio/diversity/alpha/tests/test_faith_pd.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,853 copying skbio/diversity/alpha/tests/test_chao1.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,855 copying skbio/diversity/alpha/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,857 copying skbio/diversity/alpha/tests/test_gini.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,859 copying skbio/diversity/alpha/tests/test_ace.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,861 copying skbio/diversity/alpha/tests/test_lladser.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,863 copying skbio/diversity/alpha/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests 2022-12-09T22:13:33,866 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2022-12-09T22:13:33,867 copying skbio/diversity/beta/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2022-12-09T22:13:33,869 copying skbio/diversity/beta/tests/test_unifrac.py -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests 2022-12-09T22:13:33,873 creating build/lib.linux-armv7l-cpython-39/skbio/util/tests 2022-12-09T22:13:33,874 copying skbio/util/tests/test_decorator.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2022-12-09T22:13:33,877 copying skbio/util/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2022-12-09T22:13:33,879 copying skbio/util/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2022-12-09T22:13:33,881 copying skbio/util/tests/test_testing.py -> build/lib.linux-armv7l-cpython-39/skbio/util/tests 2022-12-09T22:13:33,885 creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,886 copying skbio/stats/tests/test_power.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,889 copying skbio/stats/tests/test_misc.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,891 copying skbio/stats/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,892 copying skbio/stats/tests/test_composition.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,896 copying skbio/stats/tests/test_subsample.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,899 copying skbio/stats/tests/test_gradient.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests 2022-12-09T22:13:33,903 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,904 copying skbio/stats/distance/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,908 copying skbio/stats/distance/_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,910 copying skbio/stats/distance/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,913 copying skbio/stats/distance/_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,915 copying skbio/stats/distance/_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,918 copying skbio/stats/distance/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,920 copying skbio/stats/distance/_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,923 copying skbio/stats/distance/_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:13:33,926 creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2022-12-09T22:13:33,927 copying skbio/stats/evolve/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2022-12-09T22:13:33,930 copying skbio/stats/evolve/_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve 2022-12-09T22:13:33,933 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,934 copying skbio/stats/ordination/_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,936 copying skbio/stats/ordination/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,939 copying skbio/stats/ordination/_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,942 copying skbio/stats/ordination/_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,944 copying skbio/stats/ordination/_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,947 copying skbio/stats/ordination/_utils.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,949 copying skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:13:33,953 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,954 copying skbio/stats/distance/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,956 copying skbio/stats/distance/tests/test_mantel.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,959 copying skbio/stats/distance/tests/test_bioenv.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,961 copying skbio/stats/distance/tests/test_permdisp.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,964 copying skbio/stats/distance/tests/test_permanova.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,966 copying skbio/stats/distance/tests/test_anosim.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,969 copying skbio/stats/distance/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests 2022-12-09T22:13:33,973 creating build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2022-12-09T22:13:33,974 copying skbio/stats/evolve/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2022-12-09T22:13:33,976 copying skbio/stats/evolve/tests/test_hommola.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests 2022-12-09T22:13:33,979 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,980 copying skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,983 copying skbio/stats/ordination/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,986 copying skbio/stats/ordination/tests/test_ordination_results.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,988 copying skbio/stats/ordination/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,990 copying skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,993 copying skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,995 copying skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests 2022-12-09T22:13:33,998 creating build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2022-12-09T22:13:33,999 copying skbio/metadata/tests/test_intersection.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2022-12-09T22:13:34,002 copying skbio/metadata/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2022-12-09T22:13:34,004 copying skbio/metadata/tests/test_mixin.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2022-12-09T22:13:34,007 copying skbio/metadata/tests/test_interval.py -> build/lib.linux-armv7l-cpython-39/skbio/metadata/tests 2022-12-09T22:13:34,011 creating build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2022-12-09T22:13:34,012 copying skbio/tree/tests/test_nj.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2022-12-09T22:13:34,015 copying skbio/tree/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2022-12-09T22:13:34,017 copying skbio/tree/tests/test_tree.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2022-12-09T22:13:34,021 copying skbio/tree/tests/test_majority_rule.py -> build/lib.linux-armv7l-cpython-39/skbio/tree/tests 2022-12-09T22:13:34,024 creating build/lib.linux-armv7l-cpython-39/skbio/io/tests 2022-12-09T22:13:34,025 copying skbio/io/tests/test_util.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2022-12-09T22:13:34,028 copying skbio/io/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2022-12-09T22:13:34,030 copying skbio/io/tests/test_registry.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2022-12-09T22:13:34,034 copying skbio/io/tests/test_iosources.py -> build/lib.linux-armv7l-cpython-39/skbio/io/tests 2022-12-09T22:13:34,038 creating build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,039 copying skbio/io/format/_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,042 copying skbio/io/format/blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,045 copying skbio/io/format/newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,048 copying skbio/io/format/binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,050 copying skbio/io/format/genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,053 copying skbio/io/format/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,055 copying skbio/io/format/_blast.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,057 copying skbio/io/format/ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,060 copying skbio/io/format/qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,062 copying skbio/io/format/blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,065 copying skbio/io/format/emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,067 copying skbio/io/format/stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,070 copying skbio/io/format/_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,073 copying skbio/io/format/fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,076 copying skbio/io/format/lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,079 copying skbio/io/format/fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,082 copying skbio/io/format/embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,086 copying skbio/io/format/taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,089 copying skbio/io/format/gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,091 copying skbio/io/format/clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,094 copying skbio/io/format/phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format 2022-12-09T22:13:34,098 creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,099 copying skbio/io/format/tests/test_gff3.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,102 copying skbio/io/format/tests/test_ordination.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,105 copying skbio/io/format/tests/test_lsmat.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,108 copying skbio/io/format/tests/test_binary_dm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,110 copying skbio/io/format/tests/test_blast7.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,113 copying skbio/io/format/tests/test_fastq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,116 copying skbio/io/format/tests/test_newick.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,119 copying skbio/io/format/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,121 copying skbio/io/format/tests/test_embl.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,125 copying skbio/io/format/tests/test_emptyfile.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,127 copying skbio/io/format/tests/test_fasta.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,131 copying skbio/io/format/tests/test_taxdump.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,133 copying skbio/io/format/tests/test_phylip.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,136 copying skbio/io/format/tests/test_clustal.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,139 copying skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,141 copying skbio/io/format/tests/test_qseq.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,144 copying skbio/io/format/tests/test_stockholm.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,147 copying skbio/io/format/tests/test_blast6.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,149 copying skbio/io/format/tests/test_genbank.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,152 copying skbio/io/format/tests/test_base.py -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests 2022-12-09T22:13:34,155 creating build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2022-12-09T22:13:34,156 copying skbio/alignment/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2022-12-09T22:13:34,158 copying skbio/alignment/tests/test_pairwise.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2022-12-09T22:13:34,162 copying skbio/alignment/tests/test_tabular_msa.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2022-12-09T22:13:34,167 copying skbio/alignment/tests/test_ssw.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/tests 2022-12-09T22:13:34,171 creating build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib 2022-12-09T22:13:34,172 copying skbio/alignment/_lib/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib 2022-12-09T22:13:34,175 creating build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,176 copying skbio/sequence/tests/test_distance.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,179 copying skbio/sequence/tests/test_nucleotide_sequences.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,182 copying skbio/sequence/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,184 copying skbio/sequence/tests/test_genetic_code.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,186 copying skbio/sequence/tests/test_protein.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,189 copying skbio/sequence/tests/test_dna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,191 copying skbio/sequence/tests/test_grammared_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,194 copying skbio/sequence/tests/test_rna.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,196 copying skbio/sequence/tests/test_sequence.py -> build/lib.linux-armv7l-cpython-39/skbio/sequence/tests 2022-12-09T22:13:34,245 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data 2022-12-09T22:13:34,246 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:13:34,247 copying skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:13:34,250 copying skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:13:34,252 copying skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:13:34,254 copying skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:13:34,257 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data 2022-12-09T22:13:34,257 creating build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,259 copying skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,261 copying skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,263 copying skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,266 copying skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,268 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,270 copying skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:13:34,273 creating build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,274 copying skbio/stats/tests/data/vr_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,276 copying skbio/stats/tests/data/vr_real_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,278 copying skbio/stats/tests/data/cr_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,281 copying skbio/stats/tests/data/cr_no_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,283 copying skbio/stats/tests/data/cr_no_data_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,285 copying skbio/stats/tests/data/vr_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,287 copying skbio/stats/tests/data/gr_wo_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,290 copying skbio/stats/tests/data/gr_w_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,292 copying skbio/stats/tests/data/vr_real_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,294 copying skbio/stats/tests/data/cr_data_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,297 copying skbio/stats/tests/data/gr_w_msg_out -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,299 copying skbio/stats/tests/data/gr_wo_msg_raw -> build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data 2022-12-09T22:13:34,301 creating build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,302 copying skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,304 copying skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,307 copying skbio/stats/distance/tests/data/dm_reordered.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,309 copying skbio/stats/distance/tests/data/exp_results.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,312 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,314 copying skbio/stats/distance/tests/data/df_extra_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,316 copying skbio/stats/distance/tests/data/df.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,319 copying skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,322 copying skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,324 copying skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,327 copying skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,329 copying skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,332 copying skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,334 copying skbio/stats/distance/tests/data/dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,336 copying skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,339 copying skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,342 copying skbio/stats/distance/tests/data/dm3.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,344 copying skbio/stats/distance/tests/data/dm4.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,346 copying skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,349 copying skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,352 copying skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,354 copying skbio/stats/distance/tests/data/dm.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,357 copying skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,359 copying skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data 2022-12-09T22:13:34,361 creating build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,362 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,365 copying skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,368 copying skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,370 copying skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,372 copying skbio/stats/ordination/tests/data/varespec.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,375 copying skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,377 copying skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,380 copying skbio/stats/ordination/tests/data/example3_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,382 copying skbio/stats/ordination/tests/data/example2_Y -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,385 copying skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,387 copying skbio/stats/ordination/tests/data/L&L_CA_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,390 copying skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,392 copying skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,394 copying skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,397 copying skbio/stats/ordination/tests/data/PCoA_skbio -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,399 copying skbio/stats/ordination/tests/data/PCoA_sample_data -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,401 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,404 copying skbio/stats/ordination/tests/data/example2_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,406 copying skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,408 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,411 copying skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,413 copying skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,415 copying skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,418 copying skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,420 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,422 copying skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,425 copying skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,427 copying skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,430 copying skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,432 copying skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,434 copying skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,436 copying skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,439 copying skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,441 copying skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,443 copying skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,446 copying skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,448 copying skbio/stats/ordination/tests/data/varechem.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,451 copying skbio/stats/ordination/tests/data/example3_X -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,453 copying skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,455 copying skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data 2022-12-09T22:13:34,458 creating build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,459 copying skbio/io/tests/data/real_file_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,461 copying skbio/io/tests/data/big5_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,463 copying skbio/io/tests/data/example_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,465 copying skbio/io/tests/data/example_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,468 copying skbio/io/tests/data/example_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,470 copying skbio/io/tests/data/big5_file.bz2 -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,472 copying skbio/io/tests/data/real_file -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,475 copying skbio/io/tests/data/big5_file.gz -> build/lib.linux-armv7l-cpython-39/skbio/io/tests/data 2022-12-09T22:13:34,477 creating build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,478 copying skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,480 copying skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,483 copying skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,485 copying skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,487 copying skbio/io/format/tests/data/ordination_error21 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,490 copying skbio/io/format/tests/data/qseq_invalid_read -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,492 copying skbio/io/format/tests/data/phylip_single_seq_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,494 copying skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,497 copying skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,499 copying skbio/io/format/tests/data/legacy9_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,501 copying skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,504 copying skbio/io/format/tests/data/stockholm_multiple_msa -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,507 copying skbio/io/format/tests/data/fastq_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,509 copying skbio/io/format/tests/data/blast7_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,511 copying skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,513 copying skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,516 copying skbio/io/format/tests/data/stockholm_all_data_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,518 copying skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,520 copying skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,522 copying skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,525 copying skbio/io/format/tests/data/qual_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,527 copying skbio/io/format/tests/data/ordination_example2_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,529 copying skbio/io/format/tests/data/fasta_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,532 copying skbio/io/format/tests/data/qual_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,534 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,536 copying skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,539 copying skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,541 copying skbio/io/format/tests/data/stockholm_data_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,544 copying skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,546 copying skbio/io/format/tests/data/error_double_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,549 copying skbio/io/format/tests/data/phylip_single_seq_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,551 copying skbio/io/format/tests/data/error_double_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,553 copying skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,555 copying skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,558 copying skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,560 copying skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,562 copying skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,565 copying skbio/io/format/tests/data/embl_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,567 copying skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,569 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,572 copying skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,574 copying skbio/io/format/tests/data/stockholm_different_padding -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,576 copying skbio/io/format/tests/data/ordination_error6 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,579 copying skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,581 copying skbio/io/format/tests/data/phylip_dna_3_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,583 copying skbio/io/format/tests/data/qual_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,586 copying skbio/io/format/tests/data/ordination_error10 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,588 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,591 copying skbio/io/format/tests/data/genbank_missing_locus_name -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,593 copying skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,595 copying skbio/io/format/tests/data/fasta_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,598 copying skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,600 copying skbio/io/format/tests/data/ordination_error11 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,603 copying skbio/io/format/tests/data/fasta_single_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,605 copying skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,608 copying skbio/io/format/tests/data/qseq_single_seq_sanger -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,610 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,612 copying skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,614 copying skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,617 copying skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,619 copying skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,622 copying skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,624 copying skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,627 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,629 copying skbio/io/format/tests/data/ordination_error5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,632 copying skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,634 copying skbio/io/format/tests/data/qseq_invalid_x -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,636 copying skbio/io/format/tests/data/genbank_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,639 copying skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,641 copying skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,643 copying skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,646 copying skbio/io/format/tests/data/phylip_two_chunks -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,648 copying skbio/io/format/tests/data/qseq_invalid_y -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,650 copying skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,653 copying skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,655 copying skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,658 copying skbio/io/format/tests/data/qual_blanks_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,660 copying skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,662 copying skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,664 copying skbio/io/format/tests/data/ordination_error24 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,667 copying skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,669 copying skbio/io/format/tests/data/ordination_error18 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,671 copying skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,674 copying skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,676 copying skbio/io/format/tests/data/ordination_error1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,679 copying skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,682 copying skbio/io/format/tests/data/qual_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,684 copying skbio/io/format/tests/data/qseq_invalid_filter -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,686 copying skbio/io/format/tests/data/blast7_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,688 copying skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,691 copying skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,693 copying skbio/io/format/tests/data/ordination_error4 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,696 copying skbio/io/format/tests/data/gff3_bad_missing_directive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,698 copying skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,701 copying skbio/io/format/tests/data/tsv_10_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,703 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,705 copying skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,708 copying skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,711 copying skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,713 copying skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,715 copying skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,718 copying skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,720 copying skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,722 copying skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,725 copying skbio/io/format/tests/data/legacy9_and_blast7_default -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,727 copying skbio/io/format/tests/data/stockholm_extensive -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,730 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,732 copying skbio/io/format/tests/data/stockholm_metadata_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,734 copying skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,737 copying skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,739 copying skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,741 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,743 copying skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,746 copying skbio/io/format/tests/data/qual_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,748 copying skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,750 copying skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,752 copying skbio/io/format/tests/data/stockholm_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,755 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,757 copying skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,760 copying skbio/io/format/tests/data/stockholm_malformed_data_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,762 copying skbio/io/format/tests/data/ordination_error12 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,765 copying skbio/io/format/tests/data/gff3_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,767 copying skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,769 copying skbio/io/format/tests/data/blast7_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,771 copying skbio/io/format/tests/data/ordination_error3 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,774 copying skbio/io/format/tests/data/error_qual_vtab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,776 copying skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,779 copying skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,781 copying skbio/io/format/tests/data/stockholm_multiple_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,783 copying skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,785 copying skbio/io/format/tests/data/stockholm_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,787 copying skbio/io/format/tests/data/qseq_invalid_tile -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,789 copying skbio/io/format/tests/data/ordination_error8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,792 copying skbio/io/format/tests/data/stockholm_invalid_data_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,794 copying skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,796 copying skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,799 copying skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,801 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,803 copying skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,806 copying skbio/io/format/tests/data/ordination_error17 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,808 copying skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,811 copying skbio/io/format/tests/data/whitespace_only -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,813 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,816 copying skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,818 copying skbio/io/format/tests/data/blast6_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,820 copying skbio/io/format/tests/data/stockholm_runon_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,822 copying skbio/io/format/tests/data/fastq_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,824 copying skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,827 copying skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,829 copying skbio/io/format/tests/data/stockholm_duplicate_gc -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,831 copying skbio/io/format/tests/data/phylip_variable_length_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,834 copying skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,836 copying skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,838 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,840 copying skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,843 copying skbio/io/format/tests/data/embl_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,845 copying skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,847 copying skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,850 copying skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,852 copying skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,854 copying skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,857 copying skbio/io/format/tests/data/ordination_error20 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,859 copying skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,861 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,863 copying skbio/io/format/tests/data/error_diff_ids.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,866 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,868 copying skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,871 copying skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,873 copying skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,875 copying skbio/io/format/tests/data/stockholm_duplicate_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,878 copying skbio/io/format/tests/data/ordination_error14 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,880 copying skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,882 copying skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,885 copying skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,887 copying skbio/io/format/tests/data/stockholm_nonstring_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,889 copying skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,892 copying skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,894 copying skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,897 copying skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,899 copying skbio/io/format/tests/data/ordination_error13 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,902 copying skbio/io/format/tests/data/ordination_error19 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,904 copying skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,908 copying skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,911 copying skbio/io/format/tests/data/ordination_error9 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,913 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,915 copying skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,918 copying skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,920 copying skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,922 copying skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,925 copying skbio/io/format/tests/data/stockholm_multiple_references -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,927 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,929 copying skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,932 copying skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,934 copying skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,937 copying skbio/io/format/tests/data/stockholm_single_reference -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,939 copying skbio/io/format/tests/data/ordination_error15 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,941 copying skbio/io/format/tests/data/error_qual_null.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,944 copying skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,946 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,948 copying skbio/io/format/tests/data/embl_single_record_simple -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,951 copying skbio/io/format/tests/data/qual_invalid_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,953 copying skbio/io/format/tests/data/embl_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,955 copying skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,957 copying skbio/io/format/tests/data/stockholm_missing_footer -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,960 copying skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,962 copying skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,965 copying skbio/io/format/tests/data/fasta_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,967 copying skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,969 copying skbio/io/format/tests/data/stockholm_missing_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,972 copying skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,974 copying skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,976 copying skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,979 copying skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,981 copying skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,983 copying skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,986 copying skbio/io/format/tests/data/fasta_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,988 copying skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,991 copying skbio/io/format/tests/data/blast6_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,993 copying skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,995 copying skbio/io/format/tests/data/error_tabs.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:34,998 copying skbio/io/format/tests/data/error_qual_tab.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,000 copying skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,003 copying skbio/io/format/tests/data/blast7_invalid_no_data -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,005 copying skbio/io/format/tests/data/ordination_example3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,008 copying skbio/io/format/tests/data/blast7_custom_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,010 copying skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,012 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,015 copying skbio/io/format/tests/data/qual_2_seqs_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,017 copying skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,020 copying skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,022 copying skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,024 copying skbio/io/format/tests/data/stockholm_blank_lines -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,026 copying skbio/io/format/tests/data/stockholm_rna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,028 copying skbio/io/format/tests/data/ordination_error22 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,031 copying skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,033 copying skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,035 copying skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,037 copying skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,040 copying skbio/io/format/tests/data/error_qual_escape.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,042 copying skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,044 copying skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,047 copying skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,049 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,051 copying skbio/io/format/tests/data/error_qual_del.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,053 copying skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,056 copying skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,059 copying skbio/io/format/tests/data/error_long_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,061 copying skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,063 copying skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,065 copying skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,068 copying skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,070 copying skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,072 copying skbio/io/format/tests/data/embl_uniprot_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,074 copying skbio/io/format/tests/data/stockholm_extensive_mixed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,077 copying skbio/io/format/tests/data/qual_blank_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,079 copying skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,081 copying skbio/io/format/tests/data/legacy9_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,083 copying skbio/io/format/tests/data/empty -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,085 copying skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,088 copying skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,090 copying skbio/io/format/tests/data/genbank_single_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,092 copying skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,094 copying skbio/io/format/tests/data/qseq_invalid_lane -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,096 copying skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,099 copying skbio/io/format/tests/data/tsv_8_fields -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,101 copying skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,103 copying skbio/io/format/tests/data/phylip_invalid_no_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,105 copying skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,107 copying skbio/io/format/tests/data/ordination_error16 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,110 copying skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,113 copying skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,115 copying skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,117 copying skbio/io/format/tests/data/qual_max_width_5 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,119 copying skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,121 copying skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,124 copying skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,126 copying skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,128 copying skbio/io/format/tests/data/embl_constructed -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,130 copying skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,132 copying skbio/io/format/tests/data/genbank_single_record_upper -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,134 copying skbio/io/format/tests/data/ordination_error2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,137 copying skbio/io/format/tests/data/blast6_custom_minimal -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,139 copying skbio/io/format/tests/data/error_qual_space.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,141 copying skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,143 copying skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,145 copying skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,148 copying skbio/io/format/tests/data/gff3_dna -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,150 copying skbio/io/format/tests/data/embl_multi_records -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,152 copying skbio/io/format/tests/data/legacy9_mixed_nans -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,155 copying skbio/io/format/tests/data/ordination_error7 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,157 copying skbio/io/format/tests/data/taxdump_nodes.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,159 copying skbio/io/format/tests/data/blast7_default_single_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,161 copying skbio/io/format/tests/data/gff3_multi_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,163 copying skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,165 copying skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,168 copying skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,170 copying skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,172 copying skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,174 copying skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,176 copying skbio/io/format/tests/data/error_no_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,178 copying skbio/io/format/tests/data/qual_multi_seq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,180 copying skbio/io/format/tests/data/blast7_invalid_gibberish -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,182 copying skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,184 copying skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,187 copying skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,189 copying skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,191 copying skbio/io/format/tests/data/error_short_qual.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,193 copying skbio/io/format/tests/data/embl_feature_level_record -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,196 copying skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,198 copying skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,200 copying skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,202 copying skbio/io/format/tests/data/stockholm_missing_reference_items -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,204 copying skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,207 copying skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,209 copying skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,211 copying skbio/io/format/tests/data/blast6_default_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,213 copying skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,215 copying skbio/io/format/tests/data/ordination_error23 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,217 copying skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,219 copying skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,222 copying skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,224 copying skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,226 copying skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,228 copying skbio/io/format/tests/data/genbank_single_record_lower -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,230 copying skbio/io/format/tests/data/blast6_custom_multi_line -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,232 copying skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,235 copying skbio/io/format/tests/data/taxdump_names.dmp -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,237 copying skbio/io/format/tests/data/fasta_max_width_1 -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,239 copying skbio/io/format/tests/data/error_spaces.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,241 copying skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,244 copying skbio/io/format/tests/data/blast6_invalid_column_types -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,246 copying skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,248 copying skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,251 copying skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,253 copying skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data 2022-12-09T22:13:35,277 running build_ext 2022-12-09T22:13:35,283 building 'skbio.metadata._intersection' extension 2022-12-09T22:13:35,284 creating build/temp.linux-armv7l-cpython-39 2022-12-09T22:13:35,285 creating build/temp.linux-armv7l-cpython-39/skbio 2022-12-09T22:13:35,286 creating build/temp.linux-armv7l-cpython-39/skbio/metadata 2022-12-09T22:13:35,287 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/metadata/_intersection.c -o build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o 2022-12-09T22:13:44,259 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/metadata/_intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:13:44,403 building 'skbio.stats.__subsample' extension 2022-12-09T22:13:44,404 creating build/temp.linux-armv7l-cpython-39/skbio/stats 2022-12-09T22:13:44,405 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/__subsample.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/__subsample.o 2022-12-09T22:13:44,742 In file included from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2022-12-09T22:13:44,743 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-12-09T22:13:44,743 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-12-09T22:13:44,743 from skbio/stats/__subsample.c:768: 2022-12-09T22:13:44,743 /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-12-09T22:13:44,743 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-12-09T22:13:44,743 | ^~~~~~~ 2022-12-09T22:13:47,216 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/__subsample.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:13:47,338 building 'skbio.alignment._ssw_wrapper' extension 2022-12-09T22:13:47,339 creating build/temp.linux-armv7l-cpython-39/skbio/alignment 2022-12-09T22:13:47,340 creating build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib 2022-12-09T22:13:47,341 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_lib/ssw.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-12-09T22:13:50,515 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/alignment/_ssw_wrapper.c -o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-12-09T22:13:50,856 In file included from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2022-12-09T22:13:50,856 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-12-09T22:13:50,856 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-12-09T22:13:50,856 from skbio/alignment/_ssw_wrapper.c:777: 2022-12-09T22:13:50,856 /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-12-09T22:13:50,856 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-12-09T22:13:50,857 | ^~~~~~~ 2022-12-09T22:14:00,945 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/alignment/_lib/ssw.o build/temp.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:14:01,095 building 'skbio.diversity._phylogenetic' extension 2022-12-09T22:14:01,096 creating build/temp.linux-armv7l-cpython-39/skbio/diversity 2022-12-09T22:14:01,097 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/diversity/_phylogenetic.c -o build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o 2022-12-09T22:14:01,428 In file included from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2022-12-09T22:14:01,428 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2022-12-09T22:14:01,428 from /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2022-12-09T22:14:01,428 from skbio/diversity/_phylogenetic.c:768: 2022-12-09T22:14:01,428 /tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2022-12-09T22:14:01,428 17 | #warning "Using deprecated NumPy API, disable it with " \ 2022-12-09T22:14:01,428 | ^~~~~~~ 2022-12-09T22:14:06,248 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:14:06,373 building 'skbio.stats.ordination._cutils' extension 2022-12-09T22:14:06,374 creating build/temp.linux-armv7l-cpython-39/skbio/stats/ordination 2022-12-09T22:14:06,374 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/ordination/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-12-09T22:14:24,478 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:14:24,652 building 'skbio.stats.distance._cutils' extension 2022-12-09T22:14:24,653 creating build/temp.linux-armv7l-cpython-39/skbio/stats/distance 2022-12-09T22:14:24,653 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-jr78org0/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c skbio/stats/distance/_cutils.c -o build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -I. -fopenmp-simd -DSIMDE_ENABLE_OPENMP 2022-12-09T22:14:44,885 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so 2022-12-09T22:14:45,108 installing to build/bdist.linux-armv7l/wheel 2022-12-09T22:14:45,108 running install 2022-12-09T22:14:45,133 running install_lib 2022-12-09T22:14:45,145 creating build/bdist.linux-armv7l 2022-12-09T22:14:45,145 creating build/bdist.linux-armv7l/wheel 2022-12-09T22:14:45,147 creating build/bdist.linux-armv7l/wheel/skbio 2022-12-09T22:14:45,148 copying build/lib.linux-armv7l-cpython-39/skbio/_base.py -> build/bdist.linux-armv7l/wheel/skbio 2022-12-09T22:14:45,151 creating build/bdist.linux-armv7l/wheel/skbio/tests 2022-12-09T22:14:45,152 copying build/lib.linux-armv7l-cpython-39/skbio/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2022-12-09T22:14:45,154 copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_workflow.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2022-12-09T22:14:45,157 copying build/lib.linux-armv7l-cpython-39/skbio/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/tests 2022-12-09T22:14:45,159 creating build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,160 creating build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-12-09T22:14:45,161 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-12-09T22:14:45,164 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-12-09T22:14:45,167 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-12-09T22:14:45,169 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/tests/test_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/tests 2022-12-09T22:14:45,173 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,174 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,177 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,181 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,182 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,184 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,187 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,189 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,191 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,192 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_lladser.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,195 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests 2022-12-09T22:14:45,198 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data 2022-12-09T22:14:45,200 creating build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:14:45,201 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:14:45,203 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:14:45,205 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:14:45,207 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha/tests/data/qiime-191-tt 2022-12-09T22:14:45,209 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_gini.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,211 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,213 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_ace.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,215 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_chao1.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,218 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/alpha/_faith_pd.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/alpha 2022-12-09T22:14:45,220 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,223 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_driver.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,226 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,236 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2022-12-09T22:14:45,238 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2022-12-09T22:14:45,239 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2022-12-09T22:14:45,241 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/test_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests 2022-12-09T22:14:45,245 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data 2022-12-09T22:14:45,247 creating build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,248 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,250 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,252 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/README.md -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,255 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,257 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,259 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta/tests/data/qiime-191-tt 2022-12-09T22:14:45,261 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2022-12-09T22:14:45,263 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/beta/_unifrac.py -> build/bdist.linux-armv7l/wheel/skbio/diversity/beta 2022-12-09T22:14:45,266 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_block.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,269 copying build/lib.linux-armv7l-cpython-39/skbio/diversity/_util.py -> build/bdist.linux-armv7l/wheel/skbio/diversity 2022-12-09T22:14:45,272 creating build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,274 creating build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-12-09T22:14:45,275 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-12-09T22:14:45,278 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-12-09T22:14:45,281 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-12-09T22:14:45,283 copying build/lib.linux-armv7l-cpython-39/skbio/util/tests/test_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util/tests 2022-12-09T22:14:45,286 copying build/lib.linux-armv7l-cpython-39/skbio/util/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,288 copying build/lib.linux-armv7l-cpython-39/skbio/util/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,290 copying build/lib.linux-armv7l-cpython-39/skbio/util/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,292 copying build/lib.linux-armv7l-cpython-39/skbio/util/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,295 copying build/lib.linux-armv7l-cpython-39/skbio/util/_decorator.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,298 copying build/lib.linux-armv7l-cpython-39/skbio/util/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/util 2022-12-09T22:14:45,301 creating build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,302 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,304 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_power.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,307 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,309 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,311 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,315 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,317 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/test_gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats/tests 2022-12-09T22:14:45,322 creating build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,323 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,325 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,327 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,329 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,330 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_no_data_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,332 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,335 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,337 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,339 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/vr_real_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,341 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/cr_data_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,343 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_w_msg_out -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,344 copying build/lib.linux-armv7l-cpython-39/skbio/stats/tests/data/gr_wo_msg_raw -> build/bdist.linux-armv7l/wheel/skbio/stats/tests/data 2022-12-09T22:14:45,347 copying build/lib.linux-armv7l-cpython-39/skbio/stats/composition.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,350 copying build/lib.linux-armv7l-cpython-39/skbio/stats/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,352 copying build/lib.linux-armv7l-cpython-39/skbio/stats/_subsample.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,354 copying build/lib.linux-armv7l-cpython-39/skbio/stats/_misc.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,357 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,358 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,362 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,365 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,366 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,369 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,372 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,374 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,377 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_permanova.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,379 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,382 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests 2022-12-09T22:14:45,386 creating build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,387 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_different_column_order.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,389 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,391 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm_reordered.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,393 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,395 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,397 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df_extra_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,399 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/df.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,401 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,405 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,407 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_dm.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,410 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,411 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/exp_results_single_column.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,413 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,415 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,417 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,420 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,422 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm3.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,423 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm4.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,425 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/bioenv_df_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,427 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,430 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/moving_pictures_mf.tsv -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,432 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/dm.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,434 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,436 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt -> build/bdist.linux-armv7l/wheel/skbio/stats/distance/tests/data 2022-12-09T22:14:45,438 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,440 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,470 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_bioenv.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,473 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_anosim.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,475 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,478 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_permdisp.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,480 copying build/lib.linux-armv7l-cpython-39/skbio/stats/distance/_mantel.py -> build/bdist.linux-armv7l/wheel/skbio/stats/distance 2022-12-09T22:14:45,484 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2022-12-09T22:14:45,485 creating build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2022-12-09T22:14:45,486 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2022-12-09T22:14:45,488 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/tests/test_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve/tests 2022-12-09T22:14:45,491 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2022-12-09T22:14:45,493 copying build/lib.linux-armv7l-cpython-39/skbio/stats/evolve/_hommola.py -> build/bdist.linux-armv7l/wheel/skbio/stats/evolve 2022-12-09T22:14:45,496 copying build/lib.linux-armv7l-cpython-39/skbio/stats/power.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,500 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,501 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,502 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,505 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,508 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,510 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,512 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,515 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,517 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/test_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests 2022-12-09T22:14:45,521 creating build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,522 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,524 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,527 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,528 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,530 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varespec.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,533 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,535 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,537 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,539 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_Y -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,541 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAzeros_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,543 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/L&L_CA_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,545 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,547 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,549 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,551 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_skbio -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,553 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,555 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,557 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,559 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,561 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,563 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,565 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,567 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,569 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,571 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,573 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,575 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,577 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,579 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,581 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,583 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,585 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_biplot_scaling2 -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,587 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,589 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_biplot_descriptors -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,591 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/PCoA_sample_data_12dim -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,593 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,595 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/varechem.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,597 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example3_X -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,599 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,601 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination/tests/data 2022-12-09T22:14:45,603 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,605 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,608 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_principal_coordinate_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,610 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_redundancy_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,613 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,643 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_ordination_results.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,646 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_utils.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,649 copying build/lib.linux-armv7l-cpython-39/skbio/stats/ordination/_canonical_correspondence_analysis.py -> build/bdist.linux-armv7l/wheel/skbio/stats/ordination 2022-12-09T22:14:45,652 copying build/lib.linux-armv7l-cpython-39/skbio/stats/gradient.py -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,655 copying build/lib.linux-armv7l-cpython-39/skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/stats 2022-12-09T22:14:45,663 copying build/lib.linux-armv7l-cpython-39/skbio/__init__.py -> build/bdist.linux-armv7l/wheel/skbio 2022-12-09T22:14:45,666 creating build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,667 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,670 creating build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-12-09T22:14:45,671 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_intersection.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-12-09T22:14:45,674 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-12-09T22:14:45,676 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-12-09T22:14:45,679 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/tests/test_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata/tests 2022-12-09T22:14:45,682 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,699 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,701 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_testing.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,705 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,708 copying build/lib.linux-armv7l-cpython-39/skbio/metadata/_interval.py -> build/bdist.linux-armv7l/wheel/skbio/metadata 2022-12-09T22:14:45,712 creating build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,713 creating build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-12-09T22:14:45,715 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-12-09T22:14:45,718 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-12-09T22:14:45,720 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-12-09T22:14:45,723 copying build/lib.linux-armv7l-cpython-39/skbio/tree/tests/test_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree/tests 2022-12-09T22:14:45,726 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_tree.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,731 copying build/lib.linux-armv7l-cpython-39/skbio/tree/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,733 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,735 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_majority_rule.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,738 copying build/lib.linux-armv7l-cpython-39/skbio/tree/_nj.py -> build/bdist.linux-armv7l/wheel/skbio/tree 2022-12-09T22:14:45,741 creating build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:45,742 copying build/lib.linux-armv7l-cpython-39/skbio/io/registry.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:45,747 creating build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-12-09T22:14:45,748 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_util.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-12-09T22:14:45,751 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-12-09T22:14:45,753 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_registry.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-12-09T22:14:45,757 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/test_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io/tests 2022-12-09T22:14:45,760 creating build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,761 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file_2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,763 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,765 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,767 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,769 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/example_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,771 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.bz2 -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,773 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/real_file -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,775 copying build/lib.linux-armv7l-cpython-39/skbio/io/tests/data/big5_file.gz -> build/bdist.linux-armv7l/wheel/skbio/io/tests/data 2022-12-09T22:14:45,778 copying build/lib.linux-armv7l-cpython-39/skbio/io/_warning.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:45,780 copying build/lib.linux-armv7l-cpython-39/skbio/io/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:45,782 copying build/lib.linux-armv7l-cpython-39/skbio/io/_exception.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:45,785 creating build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:45,786 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:45,790 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,791 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,794 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,797 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,800 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,802 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,805 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,808 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,811 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,813 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,817 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,819 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,822 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,825 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,828 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,831 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,833 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,836 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,839 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,842 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,845 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/test_base.py -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests 2022-12-09T22:14:45,855 creating build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,856 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,858 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,860 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_zero_seq_len -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,862 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,864 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error21 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,866 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_read -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,868 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,871 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_mixed_qual_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,874 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_number_of_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,876 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,878 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,881 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_msa -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,883 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,885 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,887 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,889 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_rn_tag -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,891 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_all_data_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,893 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,895 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,897 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,899 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,901 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example2_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,903 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,905 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,907 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,909 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,911 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,913 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_data_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,915 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,917 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,919 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_single_seq_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,921 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_double_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,923 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_multi_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,925 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,927 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_title.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,929 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_unit_sep.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,931 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_two_of_each_metadata -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,933 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,935 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,938 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,940 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,942 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_different_padding -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,944 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error6 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,946 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,948 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_dna_3_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,950 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,952 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error10 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,954 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,957 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_missing_locus_name -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,959 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,961 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,963 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,965 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error11 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,967 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,969 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,971 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_single_seq_sanger -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,973 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,976 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,978 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_no_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,980 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,982 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,987 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:45,998 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,002 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,005 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,007 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gf_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,009 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_x -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,011 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,013 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,015 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,017 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,019 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_two_chunks -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,021 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_y -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,023 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,025 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,027 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,029 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blanks_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,031 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_over_255 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,034 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,036 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error24 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,038 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,040 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error18 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,043 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,045 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,047 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,050 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_differing_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,052 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,054 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_filter -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,056 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,058 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_bio_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,061 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,063 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error4 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,065 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_missing_directive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,068 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,070 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/tsv_10_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,072 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,074 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,076 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,079 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,081 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_dna_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,083 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,085 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,087 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,089 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_type_in_column -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,091 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_and_blast7_default -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,093 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,095 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,097 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_metadata_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,099 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_multi_char -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,101 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,103 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,105 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,108 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_header_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,110 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,112 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,114 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,116 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,118 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,120 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,123 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_data_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,125 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error12 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,127 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,129 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,131 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,133 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error3 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,136 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_vtab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,139 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,141 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,143 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,145 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,147 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,148 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_tile -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,151 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,153 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_data_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,155 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,157 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_seq_lengths -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,159 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,161 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,163 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,165 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error17 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,168 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,170 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/whitespace_only -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,172 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,174 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,177 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,179 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,181 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,183 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,185 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,187 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gc -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,189 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_variable_length_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,191 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gr_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,193 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_dna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,196 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,198 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_within_qual -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,200 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,202 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_id_whitespace_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,205 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,207 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_dna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,209 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,211 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_for_sniffer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,213 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error20 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,215 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,217 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,219 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_diff_ids.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,221 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,223 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_whitespace_only_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,225 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,227 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq_roundtrip -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,229 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,231 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error14 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,233 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,235 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_extra -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,237 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_tree_without_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,239 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_nonstring_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,242 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_seq.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,244 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,246 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,248 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,250 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error13 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,252 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error19 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,255 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_missing_seq_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,257 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_seq_too_short -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,259 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error9 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,261 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,263 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,265 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,267 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gr_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,269 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,271 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_references -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,273 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,275 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_too_many_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,277 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_too_few_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,279 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,281 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_reference -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,283 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error15 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,285 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_null.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,287 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_whitespace_stripping -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,289 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,291 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_simple -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,293 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,295 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,297 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_float -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,299 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_footer -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,301 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,303 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,305 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,307 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multi_line_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,309 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,311 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_single_seq_illumina1.8 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,313 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_differing_gc_data_length -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,315 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_legacy_format -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,317 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,319 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_seq_too_long -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,323 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,325 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,327 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,329 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,331 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,333 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_tabs.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,335 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_tab.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,337 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,339 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_no_data -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,341 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_example3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,343 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_custom_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,346 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record_no_FT -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,348 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,350 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_2_seqs_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,352 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,354 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,356 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_prot_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,358 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_blank_lines -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,360 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_rna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,362 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error22 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,364 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_ws_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,366 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,368 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,370 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_multiple_multi_line_trees -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,372 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_escape.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,375 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_string -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,377 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,379 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,381 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,383 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_del.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,385 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,387 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,389 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_long_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,391 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gc_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,393 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,395 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_sequence_names -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,397 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,399 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_blank_after_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,400 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_uniprot_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,403 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_extensive_mixed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,404 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_blank_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,406 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_ws_lines_between_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,408 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,410 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/empty -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,412 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_duplicate_tree_ids -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,414 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,416 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,418 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,420 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qseq_invalid_lane -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,422 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_6_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,424 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/tsv_8_fields -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,426 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_blank_line_after_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,428 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_no_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,430 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,431 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error16 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,434 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/longreads_as_illumina.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,436 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,438 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_unrecognized_field -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,440 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_max_width_5 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,442 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,444 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,446 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,448 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_multi_blank_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,450 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_constructed -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,452 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_L&L_CA_data_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,455 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_upper -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,457 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,459 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_minimal -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,461 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_qual_space.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,463 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_tabular_msa_different_type -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,465 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_blank_line_within_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,467 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_malformed_gs_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,469 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_dna -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,471 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_multi_records -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,473 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/legacy9_mixed_nans -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,475 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error7 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,477 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_nodes.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,479 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_default_single_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,481 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_multi_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,483 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,485 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/misc_rna_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,487 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_in_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,489 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_w_beginning_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,491 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_too_many_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,493 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_prot_seqs_odd_labels -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,495 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_no_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,497 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_multi_seq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,499 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast7_invalid_gibberish -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,501 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_single_tree_with_id -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,503 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,505 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fastq_writer_sanger_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,506 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/wrapping_original_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,508 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_short_qual.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,510 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/embl_feature_level_record -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,512 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_description_newline_replacement_none -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,514 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/gff3_bad_wrong_columns -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,516 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_empty_line_before_header -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,518 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_missing_reference_items -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,520 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_single_rna_seq_non_defaults -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,522 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,524 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_ws_lines_end_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,526 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_default_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,528 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_invalid_zero_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,529 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_error23 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,531 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,533 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_invalid_after_10_seqs -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,535 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_5_blanks_start_of_file -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,537 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/phylip_whitespace_in_header_2 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,539 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,541 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/genbank_single_record_lower -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,543 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_custom_multi_line -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,544 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,546 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/taxdump_names.dmp -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,548 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/fasta_max_width_1 -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,550 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_spaces.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,552 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,554 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/blast6_invalid_column_types -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,556 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,558 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,560 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/error_trunc_at_plus.fastq -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,562 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/tests/data/qual_invalid_qual_scores_negative -> build/bdist.linux-armv7l/wheel/skbio/io/format/tests/data 2022-12-09T22:14:46,564 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast7.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,566 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/newick.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,569 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/binary_dm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,572 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/genbank.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,575 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,577 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_blast.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,579 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/ordination.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,581 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/qseq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,584 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/blast6.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,586 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/emptyfile.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,588 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/stockholm.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,591 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/_sequence_feature_vocabulary.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,594 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fasta.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,598 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/lsmat.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,600 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/fastq.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,603 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/embl.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,607 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/taxdump.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,610 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/gff3.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,612 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/clustal.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,615 copying build/lib.linux-armv7l-cpython-39/skbio/io/format/phylip.py -> build/bdist.linux-armv7l/wheel/skbio/io/format 2022-12-09T22:14:46,618 copying build/lib.linux-armv7l-cpython-39/skbio/io/_fileobject.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:46,620 copying build/lib.linux-armv7l-cpython-39/skbio/io/_iosources.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:46,623 copying build/lib.linux-armv7l-cpython-39/skbio/io/util.py -> build/bdist.linux-armv7l/wheel/skbio/io 2022-12-09T22:14:46,626 creating build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,627 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,630 creating build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-12-09T22:14:46,631 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-12-09T22:14:46,633 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-12-09T22:14:46,636 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-12-09T22:14:46,643 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/tests/test_ssw.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/tests 2022-12-09T22:14:46,647 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,665 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_tabular_msa.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,669 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,672 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_pairwise.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,676 creating build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2022-12-09T22:14:46,677 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_lib/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/alignment/_lib 2022-12-09T22:14:46,679 copying build/lib.linux-armv7l-cpython-39/skbio/alignment/_indexing.py -> build/bdist.linux-armv7l/wheel/skbio/alignment 2022-12-09T22:14:46,682 copying build/lib.linux-armv7l-cpython-39/skbio/test.py -> build/bdist.linux-armv7l/wheel/skbio 2022-12-09T22:14:46,684 creating build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,685 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_repr.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,688 creating build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,689 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,692 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_nucleotide_sequences.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,695 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,697 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,700 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,702 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,704 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,707 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,709 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence/tests 2022-12-09T22:14:46,714 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_nucleotide_mixin.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,717 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_grammared_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,720 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,722 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/distance.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,725 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_genetic_code.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,728 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_dna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,731 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_rna.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,733 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_sequence.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,737 copying build/lib.linux-armv7l-cpython-39/skbio/sequence/_protein.py -> build/bdist.linux-armv7l/wheel/skbio/sequence 2022-12-09T22:14:46,740 copying build/lib.linux-armv7l-cpython-39/skbio/workflow.py -> build/bdist.linux-armv7l/wheel/skbio 2022-12-09T22:14:46,743 running install_egg_info 2022-12-09T22:14:46,775 running egg_info 2022-12-09T22:14:46,781 writing scikit_bio.egg-info/PKG-INFO 2022-12-09T22:14:46,783 writing dependency_links to scikit_bio.egg-info/dependency_links.txt 2022-12-09T22:14:46,785 writing requirements to scikit_bio.egg-info/requires.txt 2022-12-09T22:14:46,786 writing top-level names to scikit_bio.egg-info/top_level.txt 2022-12-09T22:14:46,976 reading manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:14:47,007 reading manifest template 'MANIFEST.in' 2022-12-09T22:14:47,053 no previously-included directories found matching 'doc/build' 2022-12-09T22:14:47,055 no previously-included directories found matching 'doc/source/generated' 2022-12-09T22:14:47,060 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2022-12-09T22:14:47,065 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2022-12-09T22:14:47,070 warning: no previously-included files matching '*.so' found anywhere in distribution 2022-12-09T22:14:47,073 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2022-12-09T22:14:47,078 warning: no previously-included files matching '.coverage' found anywhere in distribution 2022-12-09T22:14:47,078 adding license file 'LICENSE.txt' 2022-12-09T22:14:47,127 writing manifest file 'scikit_bio.egg-info/SOURCES.txt' 2022-12-09T22:14:47,131 Copying scikit_bio.egg-info to build/bdist.linux-armv7l/wheel/scikit_bio-0.5.8-py3.9.egg-info 2022-12-09T22:14:47,144 running install_scripts 2022-12-09T22:14:47,261 creating build/bdist.linux-armv7l/wheel/scikit_bio-0.5.8.dist-info/WHEEL 2022-12-09T22:14:47,264 creating '/tmp/pip-wheel-8ovmzpam/.tmp-d47qadim/scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-09T22:14:47,268 adding 'skbio/__init__.py' 2022-12-09T22:14:47,270 adding 'skbio/_base.py' 2022-12-09T22:14:47,271 adding 'skbio/test.py' 2022-12-09T22:14:47,274 adding 'skbio/workflow.py' 2022-12-09T22:14:47,277 adding 'skbio/alignment/__init__.py' 2022-12-09T22:14:47,279 adding 'skbio/alignment/_indexing.py' 2022-12-09T22:14:47,284 adding 'skbio/alignment/_pairwise.py' 2022-12-09T22:14:47,286 adding 'skbio/alignment/_repr.py' 2022-12-09T22:14:47,435 adding 'skbio/alignment/_ssw_wrapper.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:47,449 adding 'skbio/alignment/_tabular_msa.py' 2022-12-09T22:14:47,452 adding 'skbio/alignment/_lib/__init__.py' 2022-12-09T22:14:47,453 adding 'skbio/alignment/tests/__init__.py' 2022-12-09T22:14:47,456 adding 'skbio/alignment/tests/test_pairwise.py' 2022-12-09T22:14:47,460 adding 'skbio/alignment/tests/test_ssw.py' 2022-12-09T22:14:47,471 adding 'skbio/alignment/tests/test_tabular_msa.py' 2022-12-09T22:14:47,476 adding 'skbio/diversity/__init__.py' 2022-12-09T22:14:47,478 adding 'skbio/diversity/_block.py' 2022-12-09T22:14:47,480 adding 'skbio/diversity/_driver.py' 2022-12-09T22:14:47,544 adding 'skbio/diversity/_phylogenetic.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:47,548 adding 'skbio/diversity/_util.py' 2022-12-09T22:14:47,550 adding 'skbio/diversity/alpha/__init__.py' 2022-12-09T22:14:47,551 adding 'skbio/diversity/alpha/_ace.py' 2022-12-09T22:14:47,555 adding 'skbio/diversity/alpha/_base.py' 2022-12-09T22:14:47,556 adding 'skbio/diversity/alpha/_chao1.py' 2022-12-09T22:14:47,558 adding 'skbio/diversity/alpha/_faith_pd.py' 2022-12-09T22:14:47,560 adding 'skbio/diversity/alpha/_gini.py' 2022-12-09T22:14:47,562 adding 'skbio/diversity/alpha/_lladser.py' 2022-12-09T22:14:47,564 adding 'skbio/diversity/alpha/tests/__init__.py' 2022-12-09T22:14:47,566 adding 'skbio/diversity/alpha/tests/test_ace.py' 2022-12-09T22:14:47,568 adding 'skbio/diversity/alpha/tests/test_base.py' 2022-12-09T22:14:47,569 adding 'skbio/diversity/alpha/tests/test_chao1.py' 2022-12-09T22:14:47,571 adding 'skbio/diversity/alpha/tests/test_faith_pd.py' 2022-12-09T22:14:47,572 adding 'skbio/diversity/alpha/tests/test_gini.py' 2022-12-09T22:14:47,574 adding 'skbio/diversity/alpha/tests/test_lladser.py' 2022-12-09T22:14:47,576 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/README.md' 2022-12-09T22:14:47,578 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/faith-pd.txt' 2022-12-09T22:14:47,579 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/otu-table.tsv' 2022-12-09T22:14:47,580 adding 'skbio/diversity/alpha/tests/data/qiime-191-tt/tree.nwk' 2022-12-09T22:14:47,582 adding 'skbio/diversity/beta/__init__.py' 2022-12-09T22:14:47,585 adding 'skbio/diversity/beta/_unifrac.py' 2022-12-09T22:14:47,587 adding 'skbio/diversity/beta/tests/__init__.py' 2022-12-09T22:14:47,590 adding 'skbio/diversity/beta/tests/test_unifrac.py' 2022-12-09T22:14:47,592 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/README.md' 2022-12-09T22:14:47,594 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/otu-table.tsv' 2022-12-09T22:14:47,595 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/tree.nwk' 2022-12-09T22:14:47,596 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/unweighted_unifrac_dm.txt' 2022-12-09T22:14:47,598 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_normalized_unifrac_dm.txt' 2022-12-09T22:14:47,599 adding 'skbio/diversity/beta/tests/data/qiime-191-tt/weighted_unifrac_dm.txt' 2022-12-09T22:14:47,601 adding 'skbio/diversity/tests/__init__.py' 2022-12-09T22:14:47,603 adding 'skbio/diversity/tests/test_block.py' 2022-12-09T22:14:47,606 adding 'skbio/diversity/tests/test_driver.py' 2022-12-09T22:14:47,608 adding 'skbio/diversity/tests/test_util.py' 2022-12-09T22:14:47,610 adding 'skbio/io/__init__.py' 2022-12-09T22:14:47,612 adding 'skbio/io/_exception.py' 2022-12-09T22:14:47,613 adding 'skbio/io/_fileobject.py' 2022-12-09T22:14:47,615 adding 'skbio/io/_iosources.py' 2022-12-09T22:14:47,616 adding 'skbio/io/_warning.py' 2022-12-09T22:14:47,622 adding 'skbio/io/registry.py' 2022-12-09T22:14:47,624 adding 'skbio/io/util.py' 2022-12-09T22:14:47,627 adding 'skbio/io/format/__init__.py' 2022-12-09T22:14:47,628 adding 'skbio/io/format/_base.py' 2022-12-09T22:14:47,630 adding 'skbio/io/format/_blast.py' 2022-12-09T22:14:47,632 adding 'skbio/io/format/_sequence_feature_vocabulary.py' 2022-12-09T22:14:47,634 adding 'skbio/io/format/binary_dm.py' 2022-12-09T22:14:47,636 adding 'skbio/io/format/blast6.py' 2022-12-09T22:14:47,638 adding 'skbio/io/format/blast7.py' 2022-12-09T22:14:47,640 adding 'skbio/io/format/clustal.py' 2022-12-09T22:14:47,648 adding 'skbio/io/format/embl.py' 2022-12-09T22:14:47,649 adding 'skbio/io/format/emptyfile.py' 2022-12-09T22:14:47,654 adding 'skbio/io/format/fasta.py' 2022-12-09T22:14:47,657 adding 'skbio/io/format/fastq.py' 2022-12-09T22:14:47,660 adding 'skbio/io/format/genbank.py' 2022-12-09T22:14:47,663 adding 'skbio/io/format/gff3.py' 2022-12-09T22:14:47,665 adding 'skbio/io/format/lsmat.py' 2022-12-09T22:14:47,669 adding 'skbio/io/format/newick.py' 2022-12-09T22:14:47,671 adding 'skbio/io/format/ordination.py' 2022-12-09T22:14:47,674 adding 'skbio/io/format/phylip.py' 2022-12-09T22:14:47,676 adding 'skbio/io/format/qseq.py' 2022-12-09T22:14:47,679 adding 'skbio/io/format/stockholm.py' 2022-12-09T22:14:47,682 adding 'skbio/io/format/taxdump.py' 2022-12-09T22:14:47,684 adding 'skbio/io/format/tests/__init__.py' 2022-12-09T22:14:47,686 adding 'skbio/io/format/tests/test_base.py' 2022-12-09T22:14:47,688 adding 'skbio/io/format/tests/test_binary_dm.py' 2022-12-09T22:14:47,689 adding 'skbio/io/format/tests/test_blast6.py' 2022-12-09T22:14:47,691 adding 'skbio/io/format/tests/test_blast7.py' 2022-12-09T22:14:47,693 adding 'skbio/io/format/tests/test_clustal.py' 2022-12-09T22:14:47,697 adding 'skbio/io/format/tests/test_embl.py' 2022-12-09T22:14:47,699 adding 'skbio/io/format/tests/test_emptyfile.py' 2022-12-09T22:14:47,703 adding 'skbio/io/format/tests/test_fasta.py' 2022-12-09T22:14:47,706 adding 'skbio/io/format/tests/test_fastq.py' 2022-12-09T22:14:47,708 adding 'skbio/io/format/tests/test_genbank.py' 2022-12-09T22:14:47,710 adding 'skbio/io/format/tests/test_gff3.py' 2022-12-09T22:14:47,712 adding 'skbio/io/format/tests/test_lsmat.py' 2022-12-09T22:14:47,714 adding 'skbio/io/format/tests/test_newick.py' 2022-12-09T22:14:47,716 adding 'skbio/io/format/tests/test_ordination.py' 2022-12-09T22:14:47,718 adding 'skbio/io/format/tests/test_phylip.py' 2022-12-09T22:14:47,720 adding 'skbio/io/format/tests/test_qseq.py' 2022-12-09T22:14:47,721 adding 'skbio/io/format/tests/test_sequence_feature_vocabulary.py' 2022-12-09T22:14:47,724 adding 'skbio/io/format/tests/test_stockholm.py' 2022-12-09T22:14:47,726 adding 'skbio/io/format/tests/test_taxdump.py' 2022-12-09T22:14:47,735 adding 'skbio/io/format/tests/data/blast6_custom_minimal' 2022-12-09T22:14:47,737 adding 'skbio/io/format/tests/data/blast6_custom_mixed_nans' 2022-12-09T22:14:47,738 adding 'skbio/io/format/tests/data/blast6_custom_multi_line' 2022-12-09T22:14:47,739 adding 'skbio/io/format/tests/data/blast6_custom_single_line' 2022-12-09T22:14:47,740 adding 'skbio/io/format/tests/data/blast6_default_multi_line' 2022-12-09T22:14:47,741 adding 'skbio/io/format/tests/data/blast6_default_single_line' 2022-12-09T22:14:47,743 adding 'skbio/io/format/tests/data/blast6_invalid_column_types' 2022-12-09T22:14:47,744 adding 'skbio/io/format/tests/data/blast6_invalid_number_of_columns' 2022-12-09T22:14:47,745 adding 'skbio/io/format/tests/data/blast6_invalid_type_in_column' 2022-12-09T22:14:47,746 adding 'skbio/io/format/tests/data/blast7_custom_minimal' 2022-12-09T22:14:47,747 adding 'skbio/io/format/tests/data/blast7_custom_mixed_nans' 2022-12-09T22:14:47,749 adding 'skbio/io/format/tests/data/blast7_custom_multi_line' 2022-12-09T22:14:47,750 adding 'skbio/io/format/tests/data/blast7_custom_single_line' 2022-12-09T22:14:47,751 adding 'skbio/io/format/tests/data/blast7_default_multi_line' 2022-12-09T22:14:47,752 adding 'skbio/io/format/tests/data/blast7_default_single_line' 2022-12-09T22:14:47,754 adding 'skbio/io/format/tests/data/blast7_invalid_differing_fields' 2022-12-09T22:14:47,755 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer' 2022-12-09T22:14:47,756 adding 'skbio/io/format/tests/data/blast7_invalid_for_sniffer_2' 2022-12-09T22:14:47,757 adding 'skbio/io/format/tests/data/blast7_invalid_gibberish' 2022-12-09T22:14:47,759 adding 'skbio/io/format/tests/data/blast7_invalid_no_data' 2022-12-09T22:14:47,760 adding 'skbio/io/format/tests/data/blast7_invalid_too_many_columns' 2022-12-09T22:14:47,761 adding 'skbio/io/format/tests/data/blast7_invalid_unrecognized_field' 2022-12-09T22:14:47,763 adding 'skbio/io/format/tests/data/embl_constructed' 2022-12-09T22:14:47,764 adding 'skbio/io/format/tests/data/embl_feature_level_record' 2022-12-09T22:14:47,766 adding 'skbio/io/format/tests/data/embl_feature_level_record_no_FT' 2022-12-09T22:14:47,768 adding 'skbio/io/format/tests/data/embl_multi_records' 2022-12-09T22:14:47,769 adding 'skbio/io/format/tests/data/embl_single_record' 2022-12-09T22:14:47,771 adding 'skbio/io/format/tests/data/embl_single_record_lower' 2022-12-09T22:14:47,772 adding 'skbio/io/format/tests/data/embl_single_record_simple' 2022-12-09T22:14:47,774 adding 'skbio/io/format/tests/data/embl_single_record_upper' 2022-12-09T22:14:47,775 adding 'skbio/io/format/tests/data/embl_uniprot_record' 2022-12-09T22:14:47,777 adding 'skbio/io/format/tests/data/embl_w_beginning_whitespace' 2022-12-09T22:14:47,778 adding 'skbio/io/format/tests/data/empty' 2022-12-09T22:14:47,779 adding 'skbio/io/format/tests/data/error_diff_ids.fastq' 2022-12-09T22:14:47,781 adding 'skbio/io/format/tests/data/error_double_qual.fastq' 2022-12-09T22:14:47,782 adding 'skbio/io/format/tests/data/error_double_seq.fastq' 2022-12-09T22:14:47,783 adding 'skbio/io/format/tests/data/error_long_qual.fastq' 2022-12-09T22:14:47,785 adding 'skbio/io/format/tests/data/error_no_qual.fastq' 2022-12-09T22:14:47,786 adding 'skbio/io/format/tests/data/error_qual_del.fastq' 2022-12-09T22:14:47,787 adding 'skbio/io/format/tests/data/error_qual_escape.fastq' 2022-12-09T22:14:47,789 adding 'skbio/io/format/tests/data/error_qual_null.fastq' 2022-12-09T22:14:47,790 adding 'skbio/io/format/tests/data/error_qual_space.fastq' 2022-12-09T22:14:47,791 adding 'skbio/io/format/tests/data/error_qual_tab.fastq' 2022-12-09T22:14:47,792 adding 'skbio/io/format/tests/data/error_qual_unit_sep.fastq' 2022-12-09T22:14:47,794 adding 'skbio/io/format/tests/data/error_qual_vtab.fastq' 2022-12-09T22:14:47,795 adding 'skbio/io/format/tests/data/error_short_qual.fastq' 2022-12-09T22:14:47,796 adding 'skbio/io/format/tests/data/error_spaces.fastq' 2022-12-09T22:14:47,798 adding 'skbio/io/format/tests/data/error_tabs.fastq' 2022-12-09T22:14:47,799 adding 'skbio/io/format/tests/data/error_trunc_at_plus.fastq' 2022-12-09T22:14:47,800 adding 'skbio/io/format/tests/data/error_trunc_at_qual.fastq' 2022-12-09T22:14:47,802 adding 'skbio/io/format/tests/data/error_trunc_at_seq.fastq' 2022-12-09T22:14:47,803 adding 'skbio/io/format/tests/data/error_trunc_in_plus.fastq' 2022-12-09T22:14:47,804 adding 'skbio/io/format/tests/data/error_trunc_in_qual.fastq' 2022-12-09T22:14:47,806 adding 'skbio/io/format/tests/data/error_trunc_in_seq.fastq' 2022-12-09T22:14:47,807 adding 'skbio/io/format/tests/data/error_trunc_in_title.fastq' 2022-12-09T22:14:47,808 adding 'skbio/io/format/tests/data/fasta_10_seqs' 2022-12-09T22:14:47,810 adding 'skbio/io/format/tests/data/fasta_3_seqs_defaults' 2022-12-09T22:14:47,811 adding 'skbio/io/format/tests/data/fasta_3_seqs_non_defaults' 2022-12-09T22:14:47,812 adding 'skbio/io/format/tests/data/fasta_5_blanks_start_of_file' 2022-12-09T22:14:47,814 adding 'skbio/io/format/tests/data/fasta_5_ws_lines_start_of_file' 2022-12-09T22:14:47,815 adding 'skbio/io/format/tests/data/fasta_6_blanks_start_of_file' 2022-12-09T22:14:47,816 adding 'skbio/io/format/tests/data/fasta_6_ws_lines_start_of_file' 2022-12-09T22:14:47,818 adding 'skbio/io/format/tests/data/fasta_blank_lines_between_records' 2022-12-09T22:14:47,819 adding 'skbio/io/format/tests/data/fasta_blanks_end_of_file' 2022-12-09T22:14:47,820 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_empty_str' 2022-12-09T22:14:47,821 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_multi_char' 2022-12-09T22:14:47,823 adding 'skbio/io/format/tests/data/fasta_description_newline_replacement_none' 2022-12-09T22:14:47,824 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_empty_str' 2022-12-09T22:14:47,825 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_multi_char' 2022-12-09T22:14:47,827 adding 'skbio/io/format/tests/data/fasta_id_whitespace_replacement_none' 2022-12-09T22:14:47,828 adding 'skbio/io/format/tests/data/fasta_invalid_after_10_seqs' 2022-12-09T22:14:47,829 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_after_header' 2022-12-09T22:14:47,830 adding 'skbio/io/format/tests/data/fasta_invalid_blank_line_within_sequence' 2022-12-09T22:14:47,832 adding 'skbio/io/format/tests/data/fasta_invalid_blank_sequence' 2022-12-09T22:14:47,833 adding 'skbio/io/format/tests/data/fasta_invalid_legacy_format' 2022-12-09T22:14:47,834 adding 'skbio/io/format/tests/data/fasta_invalid_missing_header' 2022-12-09T22:14:47,835 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_first' 2022-12-09T22:14:47,837 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_last' 2022-12-09T22:14:47,838 adding 'skbio/io/format/tests/data/fasta_invalid_missing_seq_data_middle' 2022-12-09T22:14:47,839 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_line_after_header' 2022-12-09T22:14:47,840 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_line_within_sequence' 2022-12-09T22:14:47,842 adding 'skbio/io/format/tests/data/fasta_invalid_whitespace_only_sequence' 2022-12-09T22:14:47,843 adding 'skbio/io/format/tests/data/fasta_max_width_1' 2022-12-09T22:14:47,844 adding 'skbio/io/format/tests/data/fasta_max_width_5' 2022-12-09T22:14:47,846 adding 'skbio/io/format/tests/data/fasta_mixed_qual_scores' 2022-12-09T22:14:47,847 adding 'skbio/io/format/tests/data/fasta_multi_seq' 2022-12-09T22:14:47,848 adding 'skbio/io/format/tests/data/fasta_multi_seq_roundtrip' 2022-12-09T22:14:47,849 adding 'skbio/io/format/tests/data/fasta_prot_seqs_odd_labels' 2022-12-09T22:14:47,851 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_defaults' 2022-12-09T22:14:47,852 adding 'skbio/io/format/tests/data/fasta_single_bio_seq_non_defaults' 2022-12-09T22:14:47,853 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_defaults' 2022-12-09T22:14:47,854 adding 'skbio/io/format/tests/data/fasta_single_dna_seq_non_defaults' 2022-12-09T22:14:47,856 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_defaults' 2022-12-09T22:14:47,857 adding 'skbio/io/format/tests/data/fasta_single_prot_seq_non_defaults' 2022-12-09T22:14:47,858 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_defaults' 2022-12-09T22:14:47,859 adding 'skbio/io/format/tests/data/fasta_single_rna_seq_non_defaults' 2022-12-09T22:14:47,861 adding 'skbio/io/format/tests/data/fasta_single_seq' 2022-12-09T22:14:47,862 adding 'skbio/io/format/tests/data/fasta_tabular_msa_different_type' 2022-12-09T22:14:47,863 adding 'skbio/io/format/tests/data/fasta_ws_lines_between_records' 2022-12-09T22:14:47,865 adding 'skbio/io/format/tests/data/fasta_ws_lines_end_of_file' 2022-12-09T22:14:47,866 adding 'skbio/io/format/tests/data/fastq_5_blanks_start_of_file' 2022-12-09T22:14:47,867 adding 'skbio/io/format/tests/data/fastq_5_ws_lines_start_of_file' 2022-12-09T22:14:47,868 adding 'skbio/io/format/tests/data/fastq_blank_lines' 2022-12-09T22:14:47,870 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_header' 2022-12-09T22:14:47,871 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_plus' 2022-12-09T22:14:47,872 adding 'skbio/io/format/tests/data/fastq_invalid_blank_after_seq' 2022-12-09T22:14:47,873 adding 'skbio/io/format/tests/data/fastq_invalid_blank_in_seq_at_symbol' 2022-12-09T22:14:47,875 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_qual' 2022-12-09T22:14:47,876 adding 'skbio/io/format/tests/data/fastq_invalid_blank_within_seq' 2022-12-09T22:14:47,877 adding 'skbio/io/format/tests/data/fastq_invalid_missing_header' 2022-12-09T22:14:47,878 adding 'skbio/io/format/tests/data/fastq_invalid_missing_seq_data' 2022-12-09T22:14:47,880 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_header' 2022-12-09T22:14:47,881 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_plus' 2022-12-09T22:14:47,882 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_after_seq' 2022-12-09T22:14:47,884 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_qual' 2022-12-09T22:14:47,885 adding 'skbio/io/format/tests/data/fastq_invalid_ws_line_within_seq' 2022-12-09T22:14:47,886 adding 'skbio/io/format/tests/data/fastq_multi_blank_between_records' 2022-12-09T22:14:47,888 adding 'skbio/io/format/tests/data/fastq_multi_blank_end_of_file' 2022-12-09T22:14:47,889 adding 'skbio/io/format/tests/data/fastq_multi_blank_start_of_file' 2022-12-09T22:14:47,890 adding 'skbio/io/format/tests/data/fastq_multi_seq_sanger' 2022-12-09T22:14:47,892 adding 'skbio/io/format/tests/data/fastq_multi_whitespace_stripping' 2022-12-09T22:14:47,893 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_between_records' 2022-12-09T22:14:47,894 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_end_of_file' 2022-12-09T22:14:47,895 adding 'skbio/io/format/tests/data/fastq_multi_ws_lines_start_of_file' 2022-12-09T22:14:47,897 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.3' 2022-12-09T22:14:47,898 adding 'skbio/io/format/tests/data/fastq_single_seq_illumina1.8' 2022-12-09T22:14:47,899 adding 'skbio/io/format/tests/data/fastq_whitespace_only_lines' 2022-12-09T22:14:47,901 adding 'skbio/io/format/tests/data/fastq_wrapping_as_illumina_no_description' 2022-12-09T22:14:47,902 adding 'skbio/io/format/tests/data/fastq_wrapping_as_sanger_no_description' 2022-12-09T22:14:47,904 adding 'skbio/io/format/tests/data/fastq_wrapping_original_sanger_no_description' 2022-12-09T22:14:47,905 adding 'skbio/io/format/tests/data/fastq_writer_illumina1.3_defaults' 2022-12-09T22:14:47,906 adding 'skbio/io/format/tests/data/fastq_writer_sanger_defaults' 2022-12-09T22:14:47,907 adding 'skbio/io/format/tests/data/fastq_writer_sanger_non_defaults' 2022-12-09T22:14:47,909 adding 'skbio/io/format/tests/data/genbank_5_blanks_start_of_file' 2022-12-09T22:14:47,910 adding 'skbio/io/format/tests/data/genbank_6_blanks_start_of_file' 2022-12-09T22:14:47,911 adding 'skbio/io/format/tests/data/genbank_missing_locus_name' 2022-12-09T22:14:47,913 adding 'skbio/io/format/tests/data/genbank_multi_records' 2022-12-09T22:14:47,914 adding 'skbio/io/format/tests/data/genbank_single_record' 2022-12-09T22:14:47,916 adding 'skbio/io/format/tests/data/genbank_single_record_lower' 2022-12-09T22:14:47,917 adding 'skbio/io/format/tests/data/genbank_single_record_upper' 2022-12-09T22:14:47,918 adding 'skbio/io/format/tests/data/genbank_w_beginning_whitespace' 2022-12-09T22:14:47,919 adding 'skbio/io/format/tests/data/gff3_bad_missing_directive' 2022-12-09T22:14:47,921 adding 'skbio/io/format/tests/data/gff3_bad_wrong_columns' 2022-12-09T22:14:47,922 adding 'skbio/io/format/tests/data/gff3_dna' 2022-12-09T22:14:47,923 adding 'skbio/io/format/tests/data/gff3_multi_record' 2022-12-09T22:14:47,925 adding 'skbio/io/format/tests/data/gff3_single_record' 2022-12-09T22:14:47,926 adding 'skbio/io/format/tests/data/illumina_full_range_as_illumina.fastq' 2022-12-09T22:14:47,927 adding 'skbio/io/format/tests/data/illumina_full_range_as_sanger.fastq' 2022-12-09T22:14:47,929 adding 'skbio/io/format/tests/data/illumina_full_range_original_illumina.fastq' 2022-12-09T22:14:47,930 adding 'skbio/io/format/tests/data/legacy9_and_blast7_default' 2022-12-09T22:14:47,931 adding 'skbio/io/format/tests/data/legacy9_invalid_differing_fields' 2022-12-09T22:14:47,933 adding 'skbio/io/format/tests/data/legacy9_invalid_too_many_columns' 2022-12-09T22:14:47,934 adding 'skbio/io/format/tests/data/legacy9_mixed_nans' 2022-12-09T22:14:47,935 adding 'skbio/io/format/tests/data/legacy9_multi_line' 2022-12-09T22:14:47,937 adding 'skbio/io/format/tests/data/legacy9_single_line' 2022-12-09T22:14:47,939 adding 'skbio/io/format/tests/data/longreads_as_illumina.fastq' 2022-12-09T22:14:47,941 adding 'skbio/io/format/tests/data/longreads_as_sanger.fastq' 2022-12-09T22:14:47,944 adding 'skbio/io/format/tests/data/longreads_original_sanger.fastq' 2022-12-09T22:14:47,945 adding 'skbio/io/format/tests/data/misc_dna_as_illumina.fastq' 2022-12-09T22:14:47,947 adding 'skbio/io/format/tests/data/misc_dna_as_sanger.fastq' 2022-12-09T22:14:47,948 adding 'skbio/io/format/tests/data/misc_dna_original_sanger.fastq' 2022-12-09T22:14:47,949 adding 'skbio/io/format/tests/data/misc_rna_as_illumina.fastq' 2022-12-09T22:14:47,951 adding 'skbio/io/format/tests/data/misc_rna_as_sanger.fastq' 2022-12-09T22:14:47,952 adding 'skbio/io/format/tests/data/misc_rna_original_sanger.fastq' 2022-12-09T22:14:47,953 adding 'skbio/io/format/tests/data/ordination_L&L_CA_data_scores' 2022-12-09T22:14:47,955 adding 'skbio/io/format/tests/data/ordination_PCoA_sample_data_3_scores' 2022-12-09T22:14:47,956 adding 'skbio/io/format/tests/data/ordination_error1' 2022-12-09T22:14:47,958 adding 'skbio/io/format/tests/data/ordination_error10' 2022-12-09T22:14:47,959 adding 'skbio/io/format/tests/data/ordination_error11' 2022-12-09T22:14:47,961 adding 'skbio/io/format/tests/data/ordination_error12' 2022-12-09T22:14:47,962 adding 'skbio/io/format/tests/data/ordination_error13' 2022-12-09T22:14:47,964 adding 'skbio/io/format/tests/data/ordination_error14' 2022-12-09T22:14:47,965 adding 'skbio/io/format/tests/data/ordination_error15' 2022-12-09T22:14:47,967 adding 'skbio/io/format/tests/data/ordination_error16' 2022-12-09T22:14:47,968 adding 'skbio/io/format/tests/data/ordination_error17' 2022-12-09T22:14:47,970 adding 'skbio/io/format/tests/data/ordination_error18' 2022-12-09T22:14:47,971 adding 'skbio/io/format/tests/data/ordination_error19' 2022-12-09T22:14:47,973 adding 'skbio/io/format/tests/data/ordination_error2' 2022-12-09T22:14:47,974 adding 'skbio/io/format/tests/data/ordination_error20' 2022-12-09T22:14:47,975 adding 'skbio/io/format/tests/data/ordination_error21' 2022-12-09T22:14:47,977 adding 'skbio/io/format/tests/data/ordination_error22' 2022-12-09T22:14:47,978 adding 'skbio/io/format/tests/data/ordination_error23' 2022-12-09T22:14:47,979 adding 'skbio/io/format/tests/data/ordination_error24' 2022-12-09T22:14:47,981 adding 'skbio/io/format/tests/data/ordination_error3' 2022-12-09T22:14:47,982 adding 'skbio/io/format/tests/data/ordination_error4' 2022-12-09T22:14:47,984 adding 'skbio/io/format/tests/data/ordination_error5' 2022-12-09T22:14:47,986 adding 'skbio/io/format/tests/data/ordination_error6' 2022-12-09T22:14:47,987 adding 'skbio/io/format/tests/data/ordination_error7' 2022-12-09T22:14:47,988 adding 'skbio/io/format/tests/data/ordination_error8' 2022-12-09T22:14:47,990 adding 'skbio/io/format/tests/data/ordination_error9' 2022-12-09T22:14:47,991 adding 'skbio/io/format/tests/data/ordination_example2_scores' 2022-12-09T22:14:47,993 adding 'skbio/io/format/tests/data/ordination_example3_scores' 2022-12-09T22:14:47,995 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site' 2022-12-09T22:14:47,996 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_site_constraints' 2022-12-09T22:14:47,997 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_CCA_species' 2022-12-09T22:14:47,999 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_PCoA_site' 2022-12-09T22:14:48,000 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site' 2022-12-09T22:14:48,002 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_site_constraints' 2022-12-09T22:14:48,003 adding 'skbio/io/format/tests/data/ordination_exp_Ordination_RDA_species' 2022-12-09T22:14:48,004 adding 'skbio/io/format/tests/data/phylip_dna_3_seqs' 2022-12-09T22:14:48,006 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_after_header' 2022-12-09T22:14:48,007 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_before_header' 2022-12-09T22:14:48,008 adding 'skbio/io/format/tests/data/phylip_invalid_empty_line_between_seqs' 2022-12-09T22:14:48,009 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_long' 2022-12-09T22:14:48,011 adding 'skbio/io/format/tests/data/phylip_invalid_header_too_short' 2022-12-09T22:14:48,012 adding 'skbio/io/format/tests/data/phylip_invalid_no_header' 2022-12-09T22:14:48,013 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_long' 2022-12-09T22:14:48,015 adding 'skbio/io/format/tests/data/phylip_invalid_seq_too_short' 2022-12-09T22:14:48,016 adding 'skbio/io/format/tests/data/phylip_invalid_too_few_seqs' 2022-12-09T22:14:48,017 adding 'skbio/io/format/tests/data/phylip_invalid_too_many_seqs' 2022-12-09T22:14:48,018 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seq_len' 2022-12-09T22:14:48,019 adding 'skbio/io/format/tests/data/phylip_invalid_zero_seqs' 2022-12-09T22:14:48,021 adding 'skbio/io/format/tests/data/phylip_single_seq_long' 2022-12-09T22:14:48,022 adding 'skbio/io/format/tests/data/phylip_single_seq_short' 2022-12-09T22:14:48,023 adding 'skbio/io/format/tests/data/phylip_two_chunks' 2022-12-09T22:14:48,025 adding 'skbio/io/format/tests/data/phylip_variable_length_ids' 2022-12-09T22:14:48,026 adding 'skbio/io/format/tests/data/phylip_varied_whitespace_in_seqs' 2022-12-09T22:14:48,027 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_1' 2022-12-09T22:14:48,028 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_2' 2022-12-09T22:14:48,030 adding 'skbio/io/format/tests/data/phylip_whitespace_in_header_3' 2022-12-09T22:14:48,031 adding 'skbio/io/format/tests/data/qseq_invalid_filter' 2022-12-09T22:14:48,032 adding 'skbio/io/format/tests/data/qseq_invalid_lane' 2022-12-09T22:14:48,034 adding 'skbio/io/format/tests/data/qseq_invalid_read' 2022-12-09T22:14:48,036 adding 'skbio/io/format/tests/data/qseq_invalid_tile' 2022-12-09T22:14:48,037 adding 'skbio/io/format/tests/data/qseq_invalid_x' 2022-12-09T22:14:48,038 adding 'skbio/io/format/tests/data/qseq_invalid_y' 2022-12-09T22:14:48,039 adding 'skbio/io/format/tests/data/qseq_multi_seq_illumina1.3' 2022-12-09T22:14:48,041 adding 'skbio/io/format/tests/data/qseq_single_seq_sanger' 2022-12-09T22:14:48,042 adding 'skbio/io/format/tests/data/qual_2_seqs_defaults' 2022-12-09T22:14:48,043 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults' 2022-12-09T22:14:48,045 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_desc_mismatch' 2022-12-09T22:14:48,046 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_extra' 2022-12-09T22:14:48,047 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_id_mismatch' 2022-12-09T22:14:48,049 adding 'skbio/io/format/tests/data/qual_3_seqs_defaults_length_mismatch' 2022-12-09T22:14:48,050 adding 'skbio/io/format/tests/data/qual_3_seqs_non_defaults' 2022-12-09T22:14:48,051 adding 'skbio/io/format/tests/data/qual_5_blanks_start_of_file' 2022-12-09T22:14:48,053 adding 'skbio/io/format/tests/data/qual_5_ws_lines_start_of_file' 2022-12-09T22:14:48,054 adding 'skbio/io/format/tests/data/qual_6_blanks_start_of_file' 2022-12-09T22:14:48,055 adding 'skbio/io/format/tests/data/qual_6_ws_lines_start_of_file' 2022-12-09T22:14:48,057 adding 'skbio/io/format/tests/data/qual_blank_lines_between_records' 2022-12-09T22:14:48,058 adding 'skbio/io/format/tests/data/qual_blanks_end_of_file' 2022-12-09T22:14:48,059 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_empty_str' 2022-12-09T22:14:48,061 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_multi_char' 2022-12-09T22:14:48,062 adding 'skbio/io/format/tests/data/qual_description_newline_replacement_none' 2022-12-09T22:14:48,063 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_empty_str' 2022-12-09T22:14:48,064 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_multi_char' 2022-12-09T22:14:48,066 adding 'skbio/io/format/tests/data/qual_id_whitespace_replacement_none' 2022-12-09T22:14:48,067 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_after_header' 2022-12-09T22:14:48,068 adding 'skbio/io/format/tests/data/qual_invalid_blank_line_within_seq' 2022-12-09T22:14:48,069 adding 'skbio/io/format/tests/data/qual_invalid_blank_sequence' 2022-12-09T22:14:48,070 adding 'skbio/io/format/tests/data/qual_invalid_legacy_format' 2022-12-09T22:14:48,072 adding 'skbio/io/format/tests/data/qual_invalid_missing_header' 2022-12-09T22:14:48,073 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_first' 2022-12-09T22:14:48,074 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_last' 2022-12-09T22:14:48,076 adding 'skbio/io/format/tests/data/qual_invalid_missing_qual_scores_middle' 2022-12-09T22:14:48,077 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_float' 2022-12-09T22:14:48,078 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_negative' 2022-12-09T22:14:48,079 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_over_255' 2022-12-09T22:14:48,081 adding 'skbio/io/format/tests/data/qual_invalid_qual_scores_string' 2022-12-09T22:14:48,082 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_line_in_seq' 2022-12-09T22:14:48,083 adding 'skbio/io/format/tests/data/qual_invalid_whitespace_only_sequence' 2022-12-09T22:14:48,085 adding 'skbio/io/format/tests/data/qual_invalid_ws_line_after_header' 2022-12-09T22:14:48,086 adding 'skbio/io/format/tests/data/qual_max_width_1' 2022-12-09T22:14:48,087 adding 'skbio/io/format/tests/data/qual_max_width_5' 2022-12-09T22:14:48,088 adding 'skbio/io/format/tests/data/qual_multi_seq' 2022-12-09T22:14:48,090 adding 'skbio/io/format/tests/data/qual_multi_seq_roundtrip' 2022-12-09T22:14:48,091 adding 'skbio/io/format/tests/data/qual_prot_seqs_odd_labels' 2022-12-09T22:14:48,092 adding 'skbio/io/format/tests/data/qual_single_bio_seq_non_defaults' 2022-12-09T22:14:48,094 adding 'skbio/io/format/tests/data/qual_single_dna_seq_non_defaults' 2022-12-09T22:14:48,095 adding 'skbio/io/format/tests/data/qual_single_nuc_seq_non_defaults' 2022-12-09T22:14:48,096 adding 'skbio/io/format/tests/data/qual_single_prot_seq_non_defaults' 2022-12-09T22:14:48,097 adding 'skbio/io/format/tests/data/qual_single_rna_seq_non_defaults' 2022-12-09T22:14:48,099 adding 'skbio/io/format/tests/data/qual_single_seq' 2022-12-09T22:14:48,100 adding 'skbio/io/format/tests/data/qual_tabular_msa_different_type' 2022-12-09T22:14:48,101 adding 'skbio/io/format/tests/data/qual_ws_lines_between_records' 2022-12-09T22:14:48,102 adding 'skbio/io/format/tests/data/qual_ws_lines_end_of_file' 2022-12-09T22:14:48,104 adding 'skbio/io/format/tests/data/sanger_full_range_as_illumina.fastq' 2022-12-09T22:14:48,105 adding 'skbio/io/format/tests/data/sanger_full_range_as_sanger.fastq' 2022-12-09T22:14:48,106 adding 'skbio/io/format/tests/data/sanger_full_range_original_sanger.fastq' 2022-12-09T22:14:48,108 adding 'skbio/io/format/tests/data/solexa_full_range_original_solexa.fastq' 2022-12-09T22:14:48,109 adding 'skbio/io/format/tests/data/stockholm_all_data_types' 2022-12-09T22:14:48,110 adding 'skbio/io/format/tests/data/stockholm_blank_lines' 2022-12-09T22:14:48,112 adding 'skbio/io/format/tests/data/stockholm_data_only' 2022-12-09T22:14:48,113 adding 'skbio/io/format/tests/data/stockholm_different_padding' 2022-12-09T22:14:48,114 adding 'skbio/io/format/tests/data/stockholm_differing_gc_data_length' 2022-12-09T22:14:48,116 adding 'skbio/io/format/tests/data/stockholm_differing_gr_data_length' 2022-12-09T22:14:48,117 adding 'skbio/io/format/tests/data/stockholm_differing_seq_lengths' 2022-12-09T22:14:48,118 adding 'skbio/io/format/tests/data/stockholm_duplicate_gc' 2022-12-09T22:14:48,119 adding 'skbio/io/format/tests/data/stockholm_duplicate_gr' 2022-12-09T22:14:48,121 adding 'skbio/io/format/tests/data/stockholm_duplicate_sequence_names' 2022-12-09T22:14:48,122 adding 'skbio/io/format/tests/data/stockholm_duplicate_tree_ids' 2022-12-09T22:14:48,123 adding 'skbio/io/format/tests/data/stockholm_extensive' 2022-12-09T22:14:48,125 adding 'skbio/io/format/tests/data/stockholm_extensive_mixed' 2022-12-09T22:14:48,126 adding 'skbio/io/format/tests/data/stockholm_invalid_data_type' 2022-12-09T22:14:48,127 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gr' 2022-12-09T22:14:48,128 adding 'skbio/io/format/tests/data/stockholm_invalid_nonexistent_gs' 2022-12-09T22:14:48,130 adding 'skbio/io/format/tests/data/stockholm_malformed_data_line' 2022-12-09T22:14:48,131 adding 'skbio/io/format/tests/data/stockholm_malformed_gc_line' 2022-12-09T22:14:48,132 adding 'skbio/io/format/tests/data/stockholm_malformed_gf_line' 2022-12-09T22:14:48,133 adding 'skbio/io/format/tests/data/stockholm_malformed_gr_line' 2022-12-09T22:14:48,135 adding 'skbio/io/format/tests/data/stockholm_malformed_gs_line' 2022-12-09T22:14:48,136 adding 'skbio/io/format/tests/data/stockholm_metadata_only' 2022-12-09T22:14:48,137 adding 'skbio/io/format/tests/data/stockholm_minimal' 2022-12-09T22:14:48,138 adding 'skbio/io/format/tests/data/stockholm_missing_footer' 2022-12-09T22:14:48,140 adding 'skbio/io/format/tests/data/stockholm_missing_header' 2022-12-09T22:14:48,141 adding 'skbio/io/format/tests/data/stockholm_missing_reference_items' 2022-12-09T22:14:48,142 adding 'skbio/io/format/tests/data/stockholm_missing_rn_tag' 2022-12-09T22:14:48,143 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_no_id' 2022-12-09T22:14:48,145 adding 'skbio/io/format/tests/data/stockholm_multi_line_tree_with_id' 2022-12-09T22:14:48,146 adding 'skbio/io/format/tests/data/stockholm_multiple_msa' 2022-12-09T22:14:48,147 adding 'skbio/io/format/tests/data/stockholm_multiple_multi_line_trees' 2022-12-09T22:14:48,149 adding 'skbio/io/format/tests/data/stockholm_multiple_references' 2022-12-09T22:14:48,150 adding 'skbio/io/format/tests/data/stockholm_multiple_trees' 2022-12-09T22:14:48,151 adding 'skbio/io/format/tests/data/stockholm_no_data' 2022-12-09T22:14:48,152 adding 'skbio/io/format/tests/data/stockholm_nonstring_labels' 2022-12-09T22:14:48,154 adding 'skbio/io/format/tests/data/stockholm_rna' 2022-12-09T22:14:48,155 adding 'skbio/io/format/tests/data/stockholm_runon_gf_no_whitespace' 2022-12-09T22:14:48,156 adding 'skbio/io/format/tests/data/stockholm_runon_gf_with_whitespace' 2022-12-09T22:14:48,158 adding 'skbio/io/format/tests/data/stockholm_runon_gs_no_whitespace' 2022-12-09T22:14:48,159 adding 'skbio/io/format/tests/data/stockholm_runon_gs_with_whitespace' 2022-12-09T22:14:48,160 adding 'skbio/io/format/tests/data/stockholm_runon_references' 2022-12-09T22:14:48,161 adding 'skbio/io/format/tests/data/stockholm_runon_references_mixed' 2022-12-09T22:14:48,163 adding 'skbio/io/format/tests/data/stockholm_single_reference' 2022-12-09T22:14:48,164 adding 'skbio/io/format/tests/data/stockholm_single_tree_with_id' 2022-12-09T22:14:48,165 adding 'skbio/io/format/tests/data/stockholm_single_tree_without_id' 2022-12-09T22:14:48,166 adding 'skbio/io/format/tests/data/stockholm_two_of_each_metadata' 2022-12-09T22:14:48,168 adding 'skbio/io/format/tests/data/stockholm_whitespace_only_lines' 2022-12-09T22:14:48,169 adding 'skbio/io/format/tests/data/taxdump_names.dmp' 2022-12-09T22:14:48,171 adding 'skbio/io/format/tests/data/taxdump_nodes.dmp' 2022-12-09T22:14:48,172 adding 'skbio/io/format/tests/data/tsv_10_fields' 2022-12-09T22:14:48,173 adding 'skbio/io/format/tests/data/tsv_8_fields' 2022-12-09T22:14:48,175 adding 'skbio/io/format/tests/data/whitespace_only' 2022-12-09T22:14:48,176 adding 'skbio/io/format/tests/data/wrapping_as_illumina.fastq' 2022-12-09T22:14:48,178 adding 'skbio/io/format/tests/data/wrapping_as_sanger.fastq' 2022-12-09T22:14:48,179 adding 'skbio/io/format/tests/data/wrapping_original_sanger.fastq' 2022-12-09T22:14:48,181 adding 'skbio/io/tests/__init__.py' 2022-12-09T22:14:48,182 adding 'skbio/io/tests/test_iosources.py' 2022-12-09T22:14:48,188 adding 'skbio/io/tests/test_registry.py' 2022-12-09T22:14:48,190 adding 'skbio/io/tests/test_util.py' 2022-12-09T22:14:48,192 adding 'skbio/io/tests/data/big5_file' 2022-12-09T22:14:48,194 adding 'skbio/io/tests/data/big5_file.bz2' 2022-12-09T22:14:48,195 adding 'skbio/io/tests/data/big5_file.gz' 2022-12-09T22:14:48,196 adding 'skbio/io/tests/data/example_file' 2022-12-09T22:14:48,198 adding 'skbio/io/tests/data/example_file.bz2' 2022-12-09T22:14:48,199 adding 'skbio/io/tests/data/example_file.gz' 2022-12-09T22:14:48,200 adding 'skbio/io/tests/data/real_file' 2022-12-09T22:14:48,201 adding 'skbio/io/tests/data/real_file_2' 2022-12-09T22:14:48,204 adding 'skbio/metadata/__init__.py' 2022-12-09T22:14:48,333 adding 'skbio/metadata/_intersection.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:48,342 adding 'skbio/metadata/_interval.py' 2022-12-09T22:14:48,344 adding 'skbio/metadata/_mixin.py' 2022-12-09T22:14:48,346 adding 'skbio/metadata/_repr.py' 2022-12-09T22:14:48,350 adding 'skbio/metadata/_testing.py' 2022-12-09T22:14:48,352 adding 'skbio/metadata/tests/__init__.py' 2022-12-09T22:14:48,354 adding 'skbio/metadata/tests/test_intersection.py' 2022-12-09T22:14:48,357 adding 'skbio/metadata/tests/test_interval.py' 2022-12-09T22:14:48,359 adding 'skbio/metadata/tests/test_mixin.py' 2022-12-09T22:14:48,362 adding 'skbio/sequence/__init__.py' 2022-12-09T22:14:48,364 adding 'skbio/sequence/_dna.py' 2022-12-09T22:14:48,368 adding 'skbio/sequence/_genetic_code.py' 2022-12-09T22:14:48,371 adding 'skbio/sequence/_grammared_sequence.py' 2022-12-09T22:14:48,373 adding 'skbio/sequence/_nucleotide_mixin.py' 2022-12-09T22:14:48,375 adding 'skbio/sequence/_protein.py' 2022-12-09T22:14:48,376 adding 'skbio/sequence/_repr.py' 2022-12-09T22:14:48,378 adding 'skbio/sequence/_rna.py' 2022-12-09T22:14:48,387 adding 'skbio/sequence/_sequence.py' 2022-12-09T22:14:48,389 adding 'skbio/sequence/distance.py' 2022-12-09T22:14:48,391 adding 'skbio/sequence/tests/__init__.py' 2022-12-09T22:14:48,393 adding 'skbio/sequence/tests/test_distance.py' 2022-12-09T22:14:48,394 adding 'skbio/sequence/tests/test_dna.py' 2022-12-09T22:14:48,397 adding 'skbio/sequence/tests/test_genetic_code.py' 2022-12-09T22:14:48,400 adding 'skbio/sequence/tests/test_grammared_sequence.py' 2022-12-09T22:14:48,402 adding 'skbio/sequence/tests/test_nucleotide_sequences.py' 2022-12-09T22:14:48,404 adding 'skbio/sequence/tests/test_protein.py' 2022-12-09T22:14:48,406 adding 'skbio/sequence/tests/test_rna.py' 2022-12-09T22:14:48,414 adding 'skbio/sequence/tests/test_sequence.py' 2022-12-09T22:14:48,417 adding 'skbio/stats/__init__.py' 2022-12-09T22:14:48,451 adding 'skbio/stats/__subsample.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:48,453 adding 'skbio/stats/_misc.py' 2022-12-09T22:14:48,455 adding 'skbio/stats/_subsample.py' 2022-12-09T22:14:48,461 adding 'skbio/stats/composition.py' 2022-12-09T22:14:48,465 adding 'skbio/stats/gradient.py' 2022-12-09T22:14:48,471 adding 'skbio/stats/power.py' 2022-12-09T22:14:48,474 adding 'skbio/stats/distance/__init__.py' 2022-12-09T22:14:48,476 adding 'skbio/stats/distance/_anosim.py' 2022-12-09T22:14:48,482 adding 'skbio/stats/distance/_base.py' 2022-12-09T22:14:48,485 adding 'skbio/stats/distance/_bioenv.py' 2022-12-09T22:14:48,734 adding 'skbio/stats/distance/_cutils.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:48,746 adding 'skbio/stats/distance/_mantel.py' 2022-12-09T22:14:48,748 adding 'skbio/stats/distance/_permanova.py' 2022-12-09T22:14:48,750 adding 'skbio/stats/distance/_permdisp.py' 2022-12-09T22:14:48,752 adding 'skbio/stats/distance/_utils.py' 2022-12-09T22:14:48,754 adding 'skbio/stats/distance/tests/__init__.py' 2022-12-09T22:14:48,755 adding 'skbio/stats/distance/tests/test_anosim.py' 2022-12-09T22:14:48,760 adding 'skbio/stats/distance/tests/test_base.py' 2022-12-09T22:14:48,762 adding 'skbio/stats/distance/tests/test_bioenv.py' 2022-12-09T22:14:48,765 adding 'skbio/stats/distance/tests/test_mantel.py' 2022-12-09T22:14:48,767 adding 'skbio/stats/distance/tests/test_permanova.py' 2022-12-09T22:14:48,769 adding 'skbio/stats/distance/tests/test_permdisp.py' 2022-12-09T22:14:48,771 adding 'skbio/stats/distance/tests/data/bioenv_df_vegan.txt' 2022-12-09T22:14:48,774 adding 'skbio/stats/distance/tests/data/bioenv_dm_vegan.txt' 2022-12-09T22:14:48,775 adding 'skbio/stats/distance/tests/data/bioenv_exp_results_vegan.txt' 2022-12-09T22:14:48,776 adding 'skbio/stats/distance/tests/data/df.txt' 2022-12-09T22:14:48,778 adding 'skbio/stats/distance/tests/data/df_extra_column.txt' 2022-12-09T22:14:48,779 adding 'skbio/stats/distance/tests/data/dm.txt' 2022-12-09T22:14:48,780 adding 'skbio/stats/distance/tests/data/dm2.txt' 2022-12-09T22:14:48,782 adding 'skbio/stats/distance/tests/data/dm3.txt' 2022-12-09T22:14:48,783 adding 'skbio/stats/distance/tests/data/dm4.txt' 2022-12-09T22:14:48,784 adding 'skbio/stats/distance/tests/data/dm_reordered.txt' 2022-12-09T22:14:48,786 adding 'skbio/stats/distance/tests/data/exp_results.txt' 2022-12-09T22:14:48,787 adding 'skbio/stats/distance/tests/data/exp_results_different_column_order.txt' 2022-12-09T22:14:48,788 adding 'skbio/stats/distance/tests/data/exp_results_single_column.txt' 2022-12-09T22:14:48,790 adding 'skbio/stats/distance/tests/data/mantel_env_dm_vegan.txt' 2022-12-09T22:14:48,792 adding 'skbio/stats/distance/tests/data/mantel_veg_dm_vegan.txt' 2022-12-09T22:14:48,795 adding 'skbio/stats/distance/tests/data/moving_pictures_dm.tsv' 2022-12-09T22:14:48,797 adding 'skbio/stats/distance/tests/data/moving_pictures_mf.tsv' 2022-12-09T22:14:48,798 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_all_dms.txt' 2022-12-09T22:14:48,799 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_dm_dm2.txt' 2022-12-09T22:14:48,801 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_duplicate_dms.txt' 2022-12-09T22:14:48,802 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal.txt' 2022-12-09T22:14:48,803 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_minimal_with_labels.txt' 2022-12-09T22:14:48,805 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_na_p_value.txt' 2022-12-09T22:14:48,806 adding 'skbio/stats/distance/tests/data/pwmantel_exp_results_reordered_distance_matrices.txt' 2022-12-09T22:14:48,808 adding 'skbio/stats/evolve/__init__.py' 2022-12-09T22:14:48,810 adding 'skbio/stats/evolve/_hommola.py' 2022-12-09T22:14:48,812 adding 'skbio/stats/evolve/tests/__init__.py' 2022-12-09T22:14:48,814 adding 'skbio/stats/evolve/tests/test_hommola.py' 2022-12-09T22:14:48,816 adding 'skbio/stats/ordination/__init__.py' 2022-12-09T22:14:48,818 adding 'skbio/stats/ordination/_canonical_correspondence_analysis.py' 2022-12-09T22:14:48,820 adding 'skbio/stats/ordination/_correspondence_analysis.py' 2022-12-09T22:14:49,051 adding 'skbio/stats/ordination/_cutils.cpython-39-arm-linux-gnueabihf.so' 2022-12-09T22:14:49,061 adding 'skbio/stats/ordination/_ordination_results.py' 2022-12-09T22:14:49,064 adding 'skbio/stats/ordination/_principal_coordinate_analysis.py' 2022-12-09T22:14:49,066 adding 'skbio/stats/ordination/_redundancy_analysis.py' 2022-12-09T22:14:49,068 adding 'skbio/stats/ordination/_utils.py' 2022-12-09T22:14:49,070 adding 'skbio/stats/ordination/tests/__init__.py' 2022-12-09T22:14:49,072 adding 'skbio/stats/ordination/tests/test_canonical_correspondence_analysis.py' 2022-12-09T22:14:49,074 adding 'skbio/stats/ordination/tests/test_correspondence_analysis.py' 2022-12-09T22:14:49,076 adding 'skbio/stats/ordination/tests/test_ordination_results.py' 2022-12-09T22:14:49,078 adding 'skbio/stats/ordination/tests/test_principal_coordinate_analysis.py' 2022-12-09T22:14:49,080 adding 'skbio/stats/ordination/tests/test_redundancy_analysis.py' 2022-12-09T22:14:49,081 adding 'skbio/stats/ordination/tests/test_util.py' 2022-12-09T22:14:49,084 adding 'skbio/stats/ordination/tests/data/L&L_CA_data' 2022-12-09T22:14:49,085 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_descriptors' 2022-12-09T22:14:49,087 adding 'skbio/stats/ordination/tests/data/PCoA_biplot_projected_descriptors' 2022-12-09T22:14:49,088 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data' 2022-12-09T22:14:49,090 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_12dim' 2022-12-09T22:14:49,091 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_2' 2022-12-09T22:14:49,092 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3' 2022-12-09T22:14:49,094 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_eigh_ref_3dim' 2022-12-09T22:14:49,095 adding 'skbio/stats/ordination/tests/data/PCoA_sample_data_3_fsvd_ref_3dim' 2022-12-09T22:14:49,096 adding 'skbio/stats/ordination/tests/data/PCoA_skbio' 2022-12-09T22:14:49,098 adding 'skbio/stats/ordination/tests/data/example2_X' 2022-12-09T22:14:49,099 adding 'skbio/stats/ordination/tests/data/example2_Y' 2022-12-09T22:14:49,100 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling1' 2022-12-09T22:14:49,102 adding 'skbio/stats/ordination/tests/data/example2_biplot_scaling2' 2022-12-09T22:14:49,103 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling1' 2022-12-09T22:14:49,104 adding 'skbio/stats/ordination/tests/data/example2_sample_constraints_scaling2' 2022-12-09T22:14:49,106 adding 'skbio/stats/ordination/tests/data/example2_site_scaling1_from_vegan' 2022-12-09T22:14:49,107 adding 'skbio/stats/ordination/tests/data/example2_site_scaling2_from_vegan' 2022-12-09T22:14:49,108 adding 'skbio/stats/ordination/tests/data/example2_species_scaling1_from_vegan' 2022-12-09T22:14:49,109 adding 'skbio/stats/ordination/tests/data/example2_species_scaling2_from_vegan' 2022-12-09T22:14:49,111 adding 'skbio/stats/ordination/tests/data/example3_X' 2022-12-09T22:14:49,112 adding 'skbio/stats/ordination/tests/data/example3_Y' 2022-12-09T22:14:49,113 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling1' 2022-12-09T22:14:49,114 adding 'skbio/stats/ordination/tests/data/example3_biplot_scaling2' 2022-12-09T22:14:49,116 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling1' 2022-12-09T22:14:49,117 adding 'skbio/stats/ordination/tests/data/example3_sample_constraints_scaling2' 2022-12-09T22:14:49,118 adding 'skbio/stats/ordination/tests/data/example3_site_scaling1_from_vegan' 2022-12-09T22:14:49,120 adding 'skbio/stats/ordination/tests/data/example3_site_scaling2_from_vegan' 2022-12-09T22:14:49,121 adding 'skbio/stats/ordination/tests/data/example3_species_scaling1_from_vegan' 2022-12-09T22:14:49,122 adding 'skbio/stats/ordination/tests/data/example3_species_scaling2_from_vegan' 2022-12-09T22:14:49,124 adding 'skbio/stats/ordination/tests/data/exp_PCoAEigenResults_site' 2022-12-09T22:14:49,125 adding 'skbio/stats/ordination/tests/data/exp_PCoAzeros_site' 2022-12-09T22:14:49,127 adding 'skbio/stats/ordination/tests/data/vare_rda_biplot_from_vegan.csv' 2022-12-09T22:14:49,128 adding 'skbio/stats/ordination/tests/data/vare_rda_constraints_from_vegan.csv' 2022-12-09T22:14:49,130 adding 'skbio/stats/ordination/tests/data/vare_rda_eigvals_from_vegan.csv' 2022-12-09T22:14:49,131 adding 'skbio/stats/ordination/tests/data/vare_rda_propexpl_from_vegan.csv' 2022-12-09T22:14:49,132 adding 'skbio/stats/ordination/tests/data/vare_rda_sites_from_vegan.csv' 2022-12-09T22:14:49,134 adding 'skbio/stats/ordination/tests/data/vare_rda_species_from_vegan.csv' 2022-12-09T22:14:49,136 adding 'skbio/stats/ordination/tests/data/varechem.csv' 2022-12-09T22:14:49,137 adding 'skbio/stats/ordination/tests/data/varespec.csv' 2022-12-09T22:14:49,139 adding 'skbio/stats/tests/__init__.py' 2022-12-09T22:14:49,143 adding 'skbio/stats/tests/test_composition.py' 2022-12-09T22:14:49,147 adding 'skbio/stats/tests/test_gradient.py' 2022-12-09T22:14:49,149 adding 'skbio/stats/tests/test_misc.py' 2022-12-09T22:14:49,151 adding 'skbio/stats/tests/test_power.py' 2022-12-09T22:14:49,153 adding 'skbio/stats/tests/test_subsample.py' 2022-12-09T22:14:49,156 adding 'skbio/stats/tests/data/cr_data_out' 2022-12-09T22:14:49,157 adding 'skbio/stats/tests/data/cr_data_raw' 2022-12-09T22:14:49,158 adding 'skbio/stats/tests/data/cr_no_data_out' 2022-12-09T22:14:49,159 adding 'skbio/stats/tests/data/cr_no_data_raw' 2022-12-09T22:14:49,161 adding 'skbio/stats/tests/data/gr_w_msg_out' 2022-12-09T22:14:49,162 adding 'skbio/stats/tests/data/gr_w_msg_raw' 2022-12-09T22:14:49,163 adding 'skbio/stats/tests/data/gr_wo_msg_out' 2022-12-09T22:14:49,165 adding 'skbio/stats/tests/data/gr_wo_msg_raw' 2022-12-09T22:14:49,166 adding 'skbio/stats/tests/data/vr_out' 2022-12-09T22:14:49,167 adding 'skbio/stats/tests/data/vr_raw' 2022-12-09T22:14:49,169 adding 'skbio/stats/tests/data/vr_real_out' 2022-12-09T22:14:49,170 adding 'skbio/stats/tests/data/vr_real_raw' 2022-12-09T22:14:49,172 adding 'skbio/tests/__init__.py' 2022-12-09T22:14:49,173 adding 'skbio/tests/test_base.py' 2022-12-09T22:14:49,176 adding 'skbio/tests/test_workflow.py' 2022-12-09T22:14:49,178 adding 'skbio/tree/__init__.py' 2022-12-09T22:14:49,179 adding 'skbio/tree/_exception.py' 2022-12-09T22:14:49,182 adding 'skbio/tree/_majority_rule.py' 2022-12-09T22:14:49,184 adding 'skbio/tree/_nj.py' 2022-12-09T22:14:49,196 adding 'skbio/tree/_tree.py' 2022-12-09T22:14:49,199 adding 'skbio/tree/tests/__init__.py' 2022-12-09T22:14:49,201 adding 'skbio/tree/tests/test_majority_rule.py' 2022-12-09T22:14:49,202 adding 'skbio/tree/tests/test_nj.py' 2022-12-09T22:14:49,209 adding 'skbio/tree/tests/test_tree.py' 2022-12-09T22:14:49,211 adding 'skbio/util/__init__.py' 2022-12-09T22:14:49,213 adding 'skbio/util/_decorator.py' 2022-12-09T22:14:49,215 adding 'skbio/util/_exception.py' 2022-12-09T22:14:49,217 adding 'skbio/util/_misc.py' 2022-12-09T22:14:49,219 adding 'skbio/util/_testing.py' 2022-12-09T22:14:49,221 adding 'skbio/util/_warning.py' 2022-12-09T22:14:49,223 adding 'skbio/util/tests/__init__.py' 2022-12-09T22:14:49,225 adding 'skbio/util/tests/test_decorator.py' 2022-12-09T22:14:49,226 adding 'skbio/util/tests/test_misc.py' 2022-12-09T22:14:49,228 adding 'skbio/util/tests/test_testing.py' 2022-12-09T22:14:49,230 adding 'scikit_bio-0.5.8.dist-info/LICENSE.txt' 2022-12-09T22:14:49,231 adding 'scikit_bio-0.5.8.dist-info/METADATA' 2022-12-09T22:14:49,233 adding 'scikit_bio-0.5.8.dist-info/WHEEL' 2022-12-09T22:14:49,234 adding 'scikit_bio-0.5.8.dist-info/top_level.txt' 2022-12-09T22:14:49,245 adding 'scikit_bio-0.5.8.dist-info/RECORD' 2022-12-09T22:14:49,298 removing build/bdist.linux-armv7l/wheel 2022-12-09T22:14:49,666 Building wheel for scikit-bio (pyproject.toml): finished with status 'done' 2022-12-09T22:14:49,729 Created wheel for scikit-bio: filename=scikit_bio-0.5.8-cp39-cp39-linux_armv7l.whl size=2478741 sha256=7692ae74dbd1b55f55796326c6f3ed2e17028eee9e09eecb0f58d7073e534c52 2022-12-09T22:14:49,730 Stored in directory: /tmp/pip-ephem-wheel-cache-w2rbb213/wheels/b7/17/57/e2aef5cc655cc85718e13e1b464af72d073338870fdd0e456c 2022-12-09T22:14:49,765 Successfully built scikit-bio 2022-12-09T22:14:49,847 Removed build tracker: '/tmp/pip-build-tracker-kon1kk21'