2022-12-10T00:14:52,831 Created temporary directory: /tmp/pip-ephem-wheel-cache-rqg8xu3a 2022-12-10T00:14:52,836 Created temporary directory: /tmp/pip-build-tracker-_sj1pj4l 2022-12-10T00:14:52,836 Initialized build tracking at /tmp/pip-build-tracker-_sj1pj4l 2022-12-10T00:14:52,837 Created build tracker: /tmp/pip-build-tracker-_sj1pj4l 2022-12-10T00:14:52,837 Entered build tracker: /tmp/pip-build-tracker-_sj1pj4l 2022-12-10T00:14:52,838 Created temporary directory: /tmp/pip-wheel-ewau08wi 2022-12-10T00:14:52,846 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-10T00:14:52,851 Created temporary directory: /tmp/pip-ephem-wheel-cache-j5hf4s2x 2022-12-10T00:14:52,903 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-10T00:14:52,910 2 location(s) to search for versions of pyrepseq: 2022-12-10T00:14:52,910 * https://pypi.org/simple/pyrepseq/ 2022-12-10T00:14:52,910 * https://www.piwheels.org/simple/pyrepseq/ 2022-12-10T00:14:52,911 Fetching project page and analyzing links: https://pypi.org/simple/pyrepseq/ 2022-12-10T00:14:52,912 Getting page https://pypi.org/simple/pyrepseq/ 2022-12-10T00:14:52,916 Found index url https://pypi.org/simple 2022-12-10T00:14:53,139 Fetched page https://pypi.org/simple/pyrepseq/ as application/vnd.pypi.simple.v1+json 2022-12-10T00:14:53,145 Found link https://files.pythonhosted.org/packages/2a/6e/d407f221827595d7c7c6c953fbce9cbe78539177fdafd66bd0d52e91c4ec/pyrepseq-0.1.tar.gz (from https://pypi.org/simple/pyrepseq/), version: 0.1 2022-12-10T00:14:53,146 Skipping link: No binaries permitted for pyrepseq: https://files.pythonhosted.org/packages/5c/cd/8dba70272781c74c063534ea320b7cf0f2ff331c5cf82879e4ba5f4d486f/pyrepseq-0.1.1-py3-none-any.whl (from https://pypi.org/simple/pyrepseq/) 2022-12-10T00:14:53,146 Found link https://files.pythonhosted.org/packages/93/d2/f802eda9252735e6a9f7af211f04e8e80c0be5f9fc608b2cce3711706e02/pyrepseq-0.1.1.tar.gz (from https://pypi.org/simple/pyrepseq/), version: 0.1.1 2022-12-10T00:14:53,147 Skipping link: No binaries permitted for pyrepseq: https://files.pythonhosted.org/packages/d1/70/9e4c3a39f9b3f0bfbd18c59bd77d9238c94cb11261fbdbb586ca8cdd1fc1/pyrepseq-0.1.2-py3-none-any.whl (from https://pypi.org/simple/pyrepseq/) 2022-12-10T00:14:53,148 Found link https://files.pythonhosted.org/packages/6e/df/c15c0625921eba17f79e027967d3a015ec3997dc2b9f183e6630d91acab0/pyrepseq-0.1.2.tar.gz (from https://pypi.org/simple/pyrepseq/), version: 0.1.2 2022-12-10T00:14:53,148 Skipping link: No binaries permitted for pyrepseq: https://files.pythonhosted.org/packages/33/e1/4054c735bc4aca16b9613f3544b23d867980b98c17a1f67e9fa5d1f067c4/pyrepseq-0.1.3-py3-none-any.whl (from https://pypi.org/simple/pyrepseq/) 2022-12-10T00:14:53,149 Found link https://files.pythonhosted.org/packages/4d/81/85d54e0ce44d05782f34e5258ba3410e795fbd9643270cdb0429aa2bf696/pyrepseq-0.1.3.tar.gz (from https://pypi.org/simple/pyrepseq/), version: 0.1.3 2022-12-10T00:14:53,150 Skipping link: No binaries permitted for pyrepseq: https://files.pythonhosted.org/packages/b3/c7/7c52bc35a286936e52ed0245bf4b677204c805c8b8283c7b6877b6d9ea58/pyrepseq-1.0-py3-none-any.whl (from https://pypi.org/simple/pyrepseq/) 2022-12-10T00:14:53,150 Found link https://files.pythonhosted.org/packages/53/88/117c964bf05e99f446ee034cf644db7b38babb91c6c840fb877e68e3c715/pyrepseq-1.0.tar.gz (from https://pypi.org/simple/pyrepseq/), version: 1.0 2022-12-10T00:14:53,151 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyrepseq/ 2022-12-10T00:14:53,152 Getting page https://www.piwheels.org/simple/pyrepseq/ 2022-12-10T00:14:53,154 Found index url https://www.piwheels.org/simple 2022-12-10T00:14:53,549 Fetched page https://www.piwheels.org/simple/pyrepseq/ as text/html 2022-12-10T00:14:53,554 Skipping link: No binaries permitted for pyrepseq: https://www.piwheels.org/simple/pyrepseq/pyrepseq-0.1.3-py3-none-any.whl#sha256=dd8c3b5497b6b416298f499b916cb5f25a0b4a95fa8c442781fecf097b2b39d4 (from https://www.piwheels.org/simple/pyrepseq/) 2022-12-10T00:14:53,554 Skipping link: No binaries permitted for pyrepseq: https://www.piwheels.org/simple/pyrepseq/pyrepseq-0.1.2-py3-none-any.whl#sha256=11d290404e581d46bf05739028106fb7fdc5cba61c4b27e7eb7f202a84780495 (from https://www.piwheels.org/simple/pyrepseq/) 2022-12-10T00:14:53,555 Skipping link: No binaries permitted for pyrepseq: https://www.piwheels.org/simple/pyrepseq/pyrepseq-0.1.1-py3-none-any.whl#sha256=ba09350e430a07ba4ea87b20d55a5c22879b48bb644f2fcbacd0a8fd6fe5c37c (from https://www.piwheels.org/simple/pyrepseq/) 2022-12-10T00:14:53,555 Skipping link: No binaries permitted for pyrepseq: https://www.piwheels.org/simple/pyrepseq/pyrepseq-0.1-py3-none-any.whl#sha256=1bdb281f17e308d5eaa2580ceb8b2ec1faac7d29eda44a6727d2027b2c607e06 (from https://www.piwheels.org/simple/pyrepseq/) 2022-12-10T00:14:53,556 Skipping link: not a file: https://www.piwheels.org/simple/pyrepseq/ 2022-12-10T00:14:53,557 Skipping link: not a file: https://pypi.org/simple/pyrepseq/ 2022-12-10T00:14:53,591 Given no hashes to check 1 links for project 'pyrepseq': discarding no candidates 2022-12-10T00:14:53,624 Collecting pyrepseq==1.0 2022-12-10T00:14:53,629 Created temporary directory: /tmp/pip-unpack-wcdrl5vn 2022-12-10T00:14:53,875 Downloading pyrepseq-1.0.tar.gz (15 kB) 2022-12-10T00:14:53,974 Added pyrepseq==1.0 from https://files.pythonhosted.org/packages/53/88/117c964bf05e99f446ee034cf644db7b38babb91c6c840fb877e68e3c715/pyrepseq-1.0.tar.gz to build tracker '/tmp/pip-build-tracker-_sj1pj4l' 2022-12-10T00:14:53,976 Running setup.py (path:/tmp/pip-wheel-ewau08wi/pyrepseq_445ddf0c513c4dcfb59cff193c19d29b/setup.py) egg_info for package pyrepseq 2022-12-10T00:14:53,978 Created temporary directory: /tmp/pip-pip-egg-info-s1c6dza3 2022-12-10T00:14:53,978 Preparing metadata (setup.py): started 2022-12-10T00:14:53,980 Running command python setup.py egg_info 2022-12-10T00:14:56,493 running egg_info 2022-12-10T00:14:56,498 creating /tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info 2022-12-10T00:14:56,579 writing /tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/PKG-INFO 2022-12-10T00:14:56,583 writing dependency_links to /tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/dependency_links.txt 2022-12-10T00:14:56,598 writing requirements to /tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/requires.txt 2022-12-10T00:14:56,600 writing top-level names to /tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/top_level.txt 2022-12-10T00:14:56,602 writing manifest file '/tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/SOURCES.txt' 2022-12-10T00:14:56,806 reading manifest file '/tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/SOURCES.txt' 2022-12-10T00:14:56,809 adding license file 'LICENSE' 2022-12-10T00:14:56,813 writing manifest file '/tmp/pip-pip-egg-info-s1c6dza3/pyrepseq.egg-info/SOURCES.txt' 2022-12-10T00:14:57,017 Preparing metadata (setup.py): finished with status 'done' 2022-12-10T00:14:57,029 Source in /tmp/pip-wheel-ewau08wi/pyrepseq_445ddf0c513c4dcfb59cff193c19d29b has version 1.0, which satisfies requirement pyrepseq==1.0 from https://files.pythonhosted.org/packages/53/88/117c964bf05e99f446ee034cf644db7b38babb91c6c840fb877e68e3c715/pyrepseq-1.0.tar.gz 2022-12-10T00:14:57,031 Removed pyrepseq==1.0 from https://files.pythonhosted.org/packages/53/88/117c964bf05e99f446ee034cf644db7b38babb91c6c840fb877e68e3c715/pyrepseq-1.0.tar.gz from build tracker '/tmp/pip-build-tracker-_sj1pj4l' 2022-12-10T00:14:57,042 Created temporary directory: /tmp/pip-unpack-9_8wpt21 2022-12-10T00:14:57,043 Building wheels for collected packages: pyrepseq 2022-12-10T00:14:57,052 Created temporary directory: /tmp/pip-wheel-ln03gefu 2022-12-10T00:14:57,052 Building wheel for pyrepseq (setup.py): started 2022-12-10T00:14:57,055 Destination directory: /tmp/pip-wheel-ln03gefu 2022-12-10T00:14:57,055 Running command python setup.py bdist_wheel 2022-12-10T00:14:59,696 running bdist_wheel 2022-12-10T00:15:00,848 running build 2022-12-10T00:15:00,849 running build_py 2022-12-10T00:15:00,916 creating build 2022-12-10T00:15:00,917 creating build/lib 2022-12-10T00:15:00,919 creating build/lib/pyrepseq 2022-12-10T00:15:00,921 copying pyrepseq/__init__.py -> build/lib/pyrepseq 2022-12-10T00:15:00,924 copying pyrepseq/plotting.py -> build/lib/pyrepseq 2022-12-10T00:15:00,928 copying pyrepseq/io.py -> build/lib/pyrepseq 2022-12-10T00:15:00,932 copying pyrepseq/distance.py -> build/lib/pyrepseq 2022-12-10T00:15:00,954 copying pyrepseq/stats.py -> build/lib/pyrepseq 2022-12-10T00:15:00,957 copying pyrepseq/version.py -> build/lib/pyrepseq 2022-12-10T00:15:00,962 running egg_info 2022-12-10T00:15:01,205 writing pyrepseq.egg-info/PKG-INFO 2022-12-10T00:15:01,208 writing dependency_links to pyrepseq.egg-info/dependency_links.txt 2022-12-10T00:15:01,212 writing requirements to pyrepseq.egg-info/requires.txt 2022-12-10T00:15:01,214 writing top-level names to pyrepseq.egg-info/top_level.txt 2022-12-10T00:15:01,330 reading manifest file 'pyrepseq.egg-info/SOURCES.txt' 2022-12-10T00:15:01,334 adding license file 'LICENSE' 2022-12-10T00:15:01,339 writing manifest file 'pyrepseq.egg-info/SOURCES.txt' 2022-12-10T00:15:01,353 /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'pyrepseq.data' as data is deprecated, please list it in `packages`. 2022-12-10T00:15:01,354 !! 2022-12-10T00:15:01,355 ############################ 2022-12-10T00:15:01,355 # Package would be ignored # 2022-12-10T00:15:01,356 ############################ 2022-12-10T00:15:01,356 Python recognizes 'pyrepseq.data' as an importable package, 2022-12-10T00:15:01,357 but it is not listed in the `packages` configuration of setuptools. 2022-12-10T00:15:01,358 'pyrepseq.data' has been automatically added to the distribution only 2022-12-10T00:15:01,358 because it may contain data files, but this behavior is likely to change 2022-12-10T00:15:01,359 in future versions of setuptools (and therefore is considered deprecated). 2022-12-10T00:15:01,359 Please make sure that 'pyrepseq.data' is included as a package by using 2022-12-10T00:15:01,360 the `packages` configuration field or the proper discovery methods 2022-12-10T00:15:01,360 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-10T00:15:01,360 instead of `find_packages(...)`/`find:`). 2022-12-10T00:15:01,361 You can read more about "package discovery" and "data files" on setuptools 2022-12-10T00:15:01,361 documentation page. 2022-12-10T00:15:01,362 !! 2022-12-10T00:15:01,362 check.warn(importable) 2022-12-10T00:15:01,363 creating build/lib/pyrepseq/data 2022-12-10T00:15:01,363 copying pyrepseq/data/pcdelta_pbmc_minervina.csv -> build/lib/pyrepseq/data 2022-12-10T00:15:01,502 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-12-10T00:15:01,503 setuptools.SetuptoolsDeprecationWarning, 2022-12-10T00:15:01,637 installing to build/bdist.linux-armv7l/wheel 2022-12-10T00:15:01,638 running install 2022-12-10T00:15:01,699 running install_lib 2022-12-10T00:15:01,825 creating build/bdist.linux-armv7l 2022-12-10T00:15:01,826 creating build/bdist.linux-armv7l/wheel 2022-12-10T00:15:01,863 creating build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,864 copying build/lib/pyrepseq/__init__.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,868 copying build/lib/pyrepseq/plotting.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,872 copying build/lib/pyrepseq/io.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,875 copying build/lib/pyrepseq/distance.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,879 copying build/lib/pyrepseq/stats.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,884 copying build/lib/pyrepseq/version.py -> build/bdist.linux-armv7l/wheel/pyrepseq 2022-12-10T00:15:01,888 creating build/bdist.linux-armv7l/wheel/pyrepseq/data 2022-12-10T00:15:01,912 copying build/lib/pyrepseq/data/pcdelta_pbmc_minervina.csv -> build/bdist.linux-armv7l/wheel/pyrepseq/data 2022-12-10T00:15:01,946 running install_egg_info 2022-12-10T00:15:02,108 Copying pyrepseq.egg-info to build/bdist.linux-armv7l/wheel/pyrepseq-1.0-py3.7.egg-info 2022-12-10T00:15:02,126 running install_scripts 2022-12-10T00:15:02,392 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-12-10T00:15:02,407 creating build/bdist.linux-armv7l/wheel/pyrepseq-1.0.dist-info/WHEEL 2022-12-10T00:15:02,412 creating '/tmp/pip-wheel-ln03gefu/pyrepseq-1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-10T00:15:02,416 adding 'pyrepseq/__init__.py' 2022-12-10T00:15:02,422 adding 'pyrepseq/distance.py' 2022-12-10T00:15:02,425 adding 'pyrepseq/io.py' 2022-12-10T00:15:02,430 adding 'pyrepseq/plotting.py' 2022-12-10T00:15:02,474 adding 'pyrepseq/stats.py' 2022-12-10T00:15:02,491 adding 'pyrepseq/version.py' 2022-12-10T00:15:02,494 adding 'pyrepseq/data/pcdelta_pbmc_minervina.csv' 2022-12-10T00:15:02,498 adding 'pyrepseq-1.0.dist-info/LICENSE' 2022-12-10T00:15:02,500 adding 'pyrepseq-1.0.dist-info/METADATA' 2022-12-10T00:15:02,502 adding 'pyrepseq-1.0.dist-info/WHEEL' 2022-12-10T00:15:02,503 adding 'pyrepseq-1.0.dist-info/top_level.txt' 2022-12-10T00:15:02,505 adding 'pyrepseq-1.0.dist-info/RECORD' 2022-12-10T00:15:02,507 removing build/bdist.linux-armv7l/wheel 2022-12-10T00:15:02,766 Building wheel for pyrepseq (setup.py): finished with status 'done' 2022-12-10T00:15:02,773 Created wheel for pyrepseq: filename=pyrepseq-1.0-py3-none-any.whl size=16529 sha256=e0ff1b66143de1d0c6a7695d6b73bb87d88015462b94678201bd60e43bae8574 2022-12-10T00:15:02,775 Stored in directory: /tmp/pip-ephem-wheel-cache-j5hf4s2x/wheels/38/06/ba/c467989864674dc1cca349fd0bf27ffdf0b44a9899954df1d5 2022-12-10T00:15:02,800 Successfully built pyrepseq 2022-12-10T00:15:02,863 Removed build tracker: '/tmp/pip-build-tracker-_sj1pj4l'