2022-12-13T10:55:57,983 Created temporary directory: /tmp/pip-ephem-wheel-cache-ufjw_wo0 2022-12-13T10:55:57,985 Created temporary directory: /tmp/pip-build-tracker-b3eiew79 2022-12-13T10:55:57,986 Initialized build tracking at /tmp/pip-build-tracker-b3eiew79 2022-12-13T10:55:57,986 Created build tracker: /tmp/pip-build-tracker-b3eiew79 2022-12-13T10:55:57,986 Entered build tracker: /tmp/pip-build-tracker-b3eiew79 2022-12-13T10:55:57,986 Created temporary directory: /tmp/pip-wheel-cz4qe17n 2022-12-13T10:55:57,990 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-13T10:55:57,992 Created temporary directory: /tmp/pip-ephem-wheel-cache-1aalcy1e 2022-12-13T10:55:58,019 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-13T10:55:58,022 2 location(s) to search for versions of relion: 2022-12-13T10:55:58,022 * https://pypi.org/simple/relion/ 2022-12-13T10:55:58,022 * https://www.piwheels.org/simple/relion/ 2022-12-13T10:55:58,022 Fetching project page and analyzing links: https://pypi.org/simple/relion/ 2022-12-13T10:55:58,023 Getting page https://pypi.org/simple/relion/ 2022-12-13T10:55:58,024 Found index url https://pypi.org/simple 2022-12-13T10:55:58,080 Fetched page https://pypi.org/simple/relion/ as application/vnd.pypi.simple.v1+json 2022-12-13T10:55:58,114 Skipping link: No binaries permitted for relion: 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2022-12-13T10:55:58,124 Found link https://files.pythonhosted.org/packages/f2/21/e9a407cd3cb5529c588396b553b1b329b32155d8b3a91d9d4ca872f33c63/relion-0.4.4.tar.gz (from https://pypi.org/simple/relion/) (requires-python:>=3.6), version: 0.4.4 2022-12-13T10:55:58,124 Skipping link: No binaries permitted for relion: https://files.pythonhosted.org/packages/15/bd/9a6d8865a437c2c11ab9526272fb4d1397f8519c90fc51b17b44f10d5c69/relion-0.4.5-py3-none-any.whl (from https://pypi.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:55:58,124 Found link https://files.pythonhosted.org/packages/ed/94/59b7db1506cbb3d91a57319887f88d2460fa9549a19768adc2c0a3baa912/relion-0.4.5.tar.gz (from https://pypi.org/simple/relion/) (requires-python:>=3.6), version: 0.4.5 2022-12-13T10:55:58,125 Skipping link: No binaries permitted for relion: https://files.pythonhosted.org/packages/9a/f7/15a18e0b95b7eea7178dd0aea6beebe79d683c50dae0a8d80df651d4e727/relion-0.4.6-py3-none-any.whl (from 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(from https://www.piwheels.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:56:06,307 Skipping link: No binaries permitted for relion: https://www.piwheels.org/simple/relion/relion-0.4.0-py3-none-any.whl#sha256=a62f613b85ca29a734a7e327710886a0b504abf31dc19e158a7c553ffaaa27ca (from https://www.piwheels.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:56:06,307 Skipping link: No binaries permitted for relion: https://www.piwheels.org/simple/relion/relion-0.3.3-py3-none-any.whl#sha256=8f8a5c783940d43765c8ce18fc6ca9df5a448f888261c00fdaeffe8026326cf2 (from https://www.piwheels.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:56:06,307 Skipping link: No binaries permitted for relion: https://www.piwheels.org/simple/relion/relion-0.3.2-py3-none-any.whl#sha256=cd54925858411d45e45c2ce6a3e4fb5a5f09b73a543edec14b09c267a45a77f0 (from https://www.piwheels.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:56:06,308 Skipping link: No binaries permitted for relion: 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(from https://www.piwheels.org/simple/relion/) (requires-python:>=3.6) 2022-12-13T10:56:06,309 Skipping link: No binaries permitted for relion: https://www.piwheels.org/simple/relion/relion-0.0.1-py2.py3-none-any.whl#sha256=9a322b10951bd180d61cdaaa163cc4823057d899b104628ac5e0cadebff0818e (from https://www.piwheels.org/simple/relion/) (requires-python:>=3.5) 2022-12-13T10:56:06,309 Skipping link: not a file: https://www.piwheels.org/simple/relion/ 2022-12-13T10:56:06,310 Skipping link: not a file: https://pypi.org/simple/relion/ 2022-12-13T10:56:06,356 Given no hashes to check 1 links for project 'relion': discarding no candidates 2022-12-13T10:56:06,375 Collecting relion==0.10.25 2022-12-13T10:56:06,378 Created temporary directory: /tmp/pip-unpack-a2r1o2yw 2022-12-13T10:56:06,555 Downloading relion-0.10.25.tar.gz (104 kB) 2022-12-13T10:56:06,733 Added relion==0.10.25 from https://files.pythonhosted.org/packages/f8/87/677f47263f903ce53cbb1803d0db2eb74751b35b9965e0d68405919631cf/relion-0.10.25.tar.gz to build tracker '/tmp/pip-build-tracker-b3eiew79' 2022-12-13T10:56:06,737 Created temporary directory: /tmp/pip-build-env-dd0cx4er 2022-12-13T10:56:06,745 Installing build dependencies: started 2022-12-13T10:56:06,746 Running command pip subprocess to install build dependencies 2022-12-13T10:56:07,986 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-12-13T10:56:08,396 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-13T10:56:08,421 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-13T10:56:18,192 Collecting setuptools>=40.6.0 2022-12-13T10:56:25,450 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-13T10:56:33,847 Collecting wheel 2022-12-13T10:56:33,864 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-13T10:56:36,170 Installing collected packages: wheel, setuptools 2022-12-13T10:56:36,321 Creating /tmp/pip-build-env-dd0cx4er/overlay/bin 2022-12-13T10:56:36,323 changing mode of /tmp/pip-build-env-dd0cx4er/overlay/bin/wheel to 755 2022-12-13T10:56:38,895 Successfully installed setuptools-65.6.3 wheel-0.38.4 2022-12-13T10:56:38,911 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-13T10:56:38,911 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-13T10:56:39,182 Installing build dependencies: finished with status 'done' 2022-12-13T10:56:39,187 Getting requirements to build wheel: started 2022-12-13T10:56:39,188 Running command Getting requirements to build wheel 2022-12-13T10:56:39,963 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/dist.py:770: UserWarning: Usage of dash-separated 'project-urls' will not be supported in future versions. Please use the underscore name 'project_urls' instead 2022-12-13T10:56:39,964 warnings.warn( 2022-12-13T10:56:40,012 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:508: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-12-13T10:56:40,012 warnings.warn(msg, warning_class) 2022-12-13T10:56:40,141 running egg_info 2022-12-13T10:56:40,146 writing src/relion.egg-info/PKG-INFO 2022-12-13T10:56:40,149 writing dependency_links to src/relion.egg-info/dependency_links.txt 2022-12-13T10:56:40,152 writing entry points to src/relion.egg-info/entry_points.txt 2022-12-13T10:56:40,154 writing requirements to src/relion.egg-info/requires.txt 2022-12-13T10:56:40,155 writing top-level names to src/relion.egg-info/top_level.txt 2022-12-13T10:56:40,180 reading manifest file 'src/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:40,184 adding license file 'LICENSE' 2022-12-13T10:56:40,188 writing manifest file 'src/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:40,307 Getting requirements to build wheel: finished with status 'done' 2022-12-13T10:56:40,317 Created temporary directory: /tmp/pip-modern-metadata-2wqd2sjm 2022-12-13T10:56:40,320 Preparing metadata (pyproject.toml): started 2022-12-13T10:56:40,321 Running command Preparing metadata (pyproject.toml) 2022-12-13T10:56:41,149 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/dist.py:770: UserWarning: Usage of dash-separated 'project-urls' will not be supported in future versions. Please use the underscore name 'project_urls' instead 2022-12-13T10:56:41,150 warnings.warn( 2022-12-13T10:56:41,193 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:508: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-12-13T10:56:41,193 warnings.warn(msg, warning_class) 2022-12-13T10:56:41,221 running dist_info 2022-12-13T10:56:41,241 creating /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info 2022-12-13T10:56:41,246 writing /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/PKG-INFO 2022-12-13T10:56:41,249 writing dependency_links to /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/dependency_links.txt 2022-12-13T10:56:41,252 writing entry points to /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/entry_points.txt 2022-12-13T10:56:41,254 writing requirements to /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/requires.txt 2022-12-13T10:56:41,255 writing top-level names to /tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/top_level.txt 2022-12-13T10:56:41,256 writing manifest file '/tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:41,279 reading manifest file '/tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:41,283 adding license file 'LICENSE' 2022-12-13T10:56:41,286 writing manifest file '/tmp/pip-modern-metadata-2wqd2sjm/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:41,287 creating '/tmp/pip-modern-metadata-2wqd2sjm/relion-0.10.25.dist-info' 2022-12-13T10:56:41,499 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-13T10:56:41,506 Source in /tmp/pip-wheel-cz4qe17n/relion_36e9a8e2810748a7b7c98375c9ac00a2 has version 0.10.25, which satisfies requirement relion==0.10.25 from https://files.pythonhosted.org/packages/f8/87/677f47263f903ce53cbb1803d0db2eb74751b35b9965e0d68405919631cf/relion-0.10.25.tar.gz 2022-12-13T10:56:41,507 Removed relion==0.10.25 from https://files.pythonhosted.org/packages/f8/87/677f47263f903ce53cbb1803d0db2eb74751b35b9965e0d68405919631cf/relion-0.10.25.tar.gz from build tracker '/tmp/pip-build-tracker-b3eiew79' 2022-12-13T10:56:41,514 Created temporary directory: /tmp/pip-unpack-b8fjp_mk 2022-12-13T10:56:41,514 Building wheels for collected packages: relion 2022-12-13T10:56:41,519 Created temporary directory: /tmp/pip-wheel-x7n_7apm 2022-12-13T10:56:41,520 Destination directory: /tmp/pip-wheel-x7n_7apm 2022-12-13T10:56:41,522 Building wheel for relion (pyproject.toml): started 2022-12-13T10:56:41,523 Running command Building wheel for relion (pyproject.toml) 2022-12-13T10:56:42,258 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/dist.py:770: UserWarning: Usage of dash-separated 'project-urls' will not be supported in future versions. Please use the underscore name 'project_urls' instead 2022-12-13T10:56:42,259 warnings.warn( 2022-12-13T10:56:42,302 /tmp/pip-build-env-dd0cx4er/overlay/lib/python3.9/site-packages/setuptools/config/setupcfg.py:508: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-12-13T10:56:42,302 warnings.warn(msg, warning_class) 2022-12-13T10:56:42,366 running bdist_wheel 2022-12-13T10:56:42,401 running build 2022-12-13T10:56:42,402 running build_py 2022-12-13T10:56:42,409 creating build 2022-12-13T10:56:42,410 creating build/lib 2022-12-13T10:56:42,411 creating build/lib/relion 2022-12-13T10:56:42,412 copying src/relion/__init__.py -> build/lib/relion 2022-12-13T10:56:42,415 copying src/relion/parse_project.py -> build/lib/relion 2022-12-13T10:56:42,418 creating build/lib/relion/zocalo 2022-12-13T10:56:42,419 copying src/relion/zocalo/service.py -> build/lib/relion/zocalo 2022-12-13T10:56:42,421 copying src/relion/zocalo/wrapper.py -> build/lib/relion/zocalo 2022-12-13T10:56:42,425 copying src/relion/zocalo/alchemy.py -> build/lib/relion/zocalo 2022-12-13T10:56:42,427 copying src/relion/zocalo/__init__.py -> build/lib/relion/zocalo 2022-12-13T10:56:42,428 copying src/relion/zocalo/images_service_plugin.py -> build/lib/relion/zocalo 2022-12-13T10:56:42,432 creating build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,433 copying src/relion/cryolo_relion_it/dls_options.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,435 copying src/relion/cryolo_relion_it/cryolo_relion_it.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,442 copying src/relion/cryolo_relion_it/cryolo_external_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,445 copying src/relion/cryolo_relion_it/select_and_split_external_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,447 copying src/relion/cryolo_relion_it/fsc_fitting_external_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,449 copying src/relion/cryolo_relion_it/icebreaker_histogram.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,451 copying src/relion/cryolo_relion_it/reconstruct_halves_external_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,453 copying src/relion/cryolo_relion_it/__init__.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,454 copying src/relion/cryolo_relion_it/mask_soft_edge_external_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,456 copying src/relion/cryolo_relion_it/cryolo_fine_tune_job.py -> build/lib/relion/cryolo_relion_it 2022-12-13T10:56:42,459 creating build/lib/relion/pipeline 2022-12-13T10:56:42,460 copying src/relion/pipeline/extra_options.py -> build/lib/relion/pipeline 2022-12-13T10:56:42,463 copying src/relion/pipeline/__init__.py -> build/lib/relion/pipeline 2022-12-13T10:56:42,466 copying src/relion/pipeline/options.py -> build/lib/relion/pipeline 2022-12-13T10:56:42,469 creating build/lib/relion/dbmodel 2022-12-13T10:56:42,470 copying src/relion/dbmodel/dbgraph.py -> build/lib/relion/dbmodel 2022-12-13T10:56:42,472 copying src/relion/dbmodel/modeltables.py -> build/lib/relion/dbmodel 2022-12-13T10:56:42,475 copying src/relion/dbmodel/__init__.py -> build/lib/relion/dbmodel 2022-12-13T10:56:42,477 copying src/relion/dbmodel/dbnode.py -> build/lib/relion/dbmodel 2022-12-13T10:56:42,481 creating build/lib/relion/cli 2022-12-13T10:56:42,482 copying src/relion/cli/print_default_options.py -> build/lib/relion/cli 2022-12-13T10:56:42,484 copying src/relion/cli/project_linker.py -> build/lib/relion/cli 2022-12-13T10:56:42,486 copying src/relion/cli/current_job.py -> build/lib/relion/cli 2022-12-13T10:56:42,488 copying src/relion/cli/run_pipeline.py -> build/lib/relion/cli 2022-12-13T10:56:42,490 copying src/relion/cli/__init__.py -> build/lib/relion/cli 2022-12-13T10:56:42,491 copying src/relion/cli/pipeline_viewer.py -> build/lib/relion/cli 2022-12-13T10:56:42,494 creating build/lib/relion/_parser 2022-12-13T10:56:42,495 copying src/relion/_parser/processnode.py -> build/lib/relion/_parser 2022-12-13T10:56:42,497 copying src/relion/_parser/class2D.py -> build/lib/relion/_parser 2022-12-13T10:56:42,499 copying src/relion/_parser/class3D.py -> build/lib/relion/_parser 2022-12-13T10:56:42,502 copying src/relion/_parser/processgraph.py -> build/lib/relion/_parser 2022-12-13T10:56:42,505 copying src/relion/_parser/jobtype.py -> build/lib/relion/_parser 2022-12-13T10:56:42,506 copying src/relion/_parser/motioncorrection.py -> build/lib/relion/_parser 2022-12-13T10:56:42,509 copying src/relion/_parser/initialmodel.py -> build/lib/relion/_parser 2022-12-13T10:56:42,511 copying src/relion/_parser/__init__.py -> build/lib/relion/_parser 2022-12-13T10:56:42,513 copying src/relion/_parser/autopick.py -> build/lib/relion/_parser 2022-12-13T10:56:42,515 copying src/relion/_parser/relion_pipeline.py -> build/lib/relion/_parser 2022-12-13T10:56:42,518 copying src/relion/_parser/ctffind.py -> build/lib/relion/_parser 2022-12-13T10:56:42,520 copying src/relion/_parser/cryolo.py -> build/lib/relion/_parser 2022-12-13T10:56:42,523 copying src/relion/_parser/relativeicethickness.py -> build/lib/relion/_parser 2022-12-13T10:56:42,525 creating build/lib/relion/node 2022-12-13T10:56:42,526 copying src/relion/node/environment.py -> build/lib/relion/node 2022-12-13T10:56:42,529 copying src/relion/node/__init__.py -> build/lib/relion/node 2022-12-13T10:56:42,531 copying src/relion/node/graph.py -> build/lib/relion/node 2022-12-13T10:56:42,534 running egg_info 2022-12-13T10:56:42,553 writing src/relion.egg-info/PKG-INFO 2022-12-13T10:56:42,555 writing dependency_links to src/relion.egg-info/dependency_links.txt 2022-12-13T10:56:42,558 writing entry points to src/relion.egg-info/entry_points.txt 2022-12-13T10:56:42,559 writing requirements to src/relion.egg-info/requires.txt 2022-12-13T10:56:42,561 writing top-level names to src/relion.egg-info/top_level.txt 2022-12-13T10:56:42,573 reading manifest file 'src/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:42,576 adding license file 'LICENSE' 2022-12-13T10:56:42,581 writing manifest file 'src/relion.egg-info/SOURCES.txt' 2022-12-13T10:56:42,604 installing to build/bdist.linux-armv7l/wheel 2022-12-13T10:56:42,605 running install 2022-12-13T10:56:42,630 running install_lib 2022-12-13T10:56:42,637 creating build/bdist.linux-armv7l 2022-12-13T10:56:42,638 creating build/bdist.linux-armv7l/wheel 2022-12-13T10:56:42,640 creating build/bdist.linux-armv7l/wheel/relion 2022-12-13T10:56:42,641 creating build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,643 copying build/lib/relion/zocalo/service.py -> build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,645 copying build/lib/relion/zocalo/wrapper.py -> build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,648 copying build/lib/relion/zocalo/alchemy.py -> build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,650 copying build/lib/relion/zocalo/__init__.py -> build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,652 copying build/lib/relion/zocalo/images_service_plugin.py -> build/bdist.linux-armv7l/wheel/relion/zocalo 2022-12-13T10:56:42,655 creating build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,656 copying build/lib/relion/cryolo_relion_it/dls_options.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,658 copying build/lib/relion/cryolo_relion_it/cryolo_relion_it.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,665 copying build/lib/relion/cryolo_relion_it/cryolo_external_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,667 copying build/lib/relion/cryolo_relion_it/select_and_split_external_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,669 copying build/lib/relion/cryolo_relion_it/fsc_fitting_external_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,671 copying build/lib/relion/cryolo_relion_it/icebreaker_histogram.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,674 copying build/lib/relion/cryolo_relion_it/reconstruct_halves_external_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,676 copying build/lib/relion/cryolo_relion_it/__init__.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,677 copying build/lib/relion/cryolo_relion_it/mask_soft_edge_external_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,679 copying build/lib/relion/cryolo_relion_it/cryolo_fine_tune_job.py -> build/bdist.linux-armv7l/wheel/relion/cryolo_relion_it 2022-12-13T10:56:42,682 creating build/bdist.linux-armv7l/wheel/relion/pipeline 2022-12-13T10:56:42,683 copying build/lib/relion/pipeline/extra_options.py -> build/bdist.linux-armv7l/wheel/relion/pipeline 2022-12-13T10:56:42,686 copying build/lib/relion/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/relion/pipeline 2022-12-13T10:56:42,689 copying build/lib/relion/pipeline/options.py -> build/bdist.linux-armv7l/wheel/relion/pipeline 2022-12-13T10:56:42,693 creating build/bdist.linux-armv7l/wheel/relion/dbmodel 2022-12-13T10:56:42,694 copying build/lib/relion/dbmodel/dbgraph.py -> build/bdist.linux-armv7l/wheel/relion/dbmodel 2022-12-13T10:56:42,696 copying build/lib/relion/dbmodel/modeltables.py -> build/bdist.linux-armv7l/wheel/relion/dbmodel 2022-12-13T10:56:42,698 copying build/lib/relion/dbmodel/__init__.py -> build/bdist.linux-armv7l/wheel/relion/dbmodel 2022-12-13T10:56:42,701 copying build/lib/relion/dbmodel/dbnode.py -> build/bdist.linux-armv7l/wheel/relion/dbmodel 2022-12-13T10:56:42,704 creating build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,705 copying build/lib/relion/cli/print_default_options.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,707 copying build/lib/relion/cli/project_linker.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,709 copying build/lib/relion/cli/current_job.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,711 copying build/lib/relion/cli/run_pipeline.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,714 copying build/lib/relion/cli/__init__.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,715 copying build/lib/relion/cli/pipeline_viewer.py -> build/bdist.linux-armv7l/wheel/relion/cli 2022-12-13T10:56:42,717 copying build/lib/relion/__init__.py -> build/bdist.linux-armv7l/wheel/relion 2022-12-13T10:56:42,721 creating build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,722 copying build/lib/relion/_parser/processnode.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,724 copying build/lib/relion/_parser/class2D.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,726 copying build/lib/relion/_parser/class3D.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,729 copying build/lib/relion/_parser/processgraph.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,732 copying build/lib/relion/_parser/jobtype.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,734 copying build/lib/relion/_parser/motioncorrection.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,736 copying build/lib/relion/_parser/initialmodel.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,738 copying build/lib/relion/_parser/__init__.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,740 copying build/lib/relion/_parser/autopick.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,742 copying build/lib/relion/_parser/relion_pipeline.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,746 copying build/lib/relion/_parser/ctffind.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,748 copying build/lib/relion/_parser/cryolo.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,751 copying build/lib/relion/_parser/relativeicethickness.py -> build/bdist.linux-armv7l/wheel/relion/_parser 2022-12-13T10:56:42,753 creating build/bdist.linux-armv7l/wheel/relion/node 2022-12-13T10:56:42,754 copying build/lib/relion/node/environment.py -> build/bdist.linux-armv7l/wheel/relion/node 2022-12-13T10:56:42,757 copying build/lib/relion/node/__init__.py -> build/bdist.linux-armv7l/wheel/relion/node 2022-12-13T10:56:42,759 copying build/lib/relion/node/graph.py -> build/bdist.linux-armv7l/wheel/relion/node 2022-12-13T10:56:42,762 copying build/lib/relion/parse_project.py -> build/bdist.linux-armv7l/wheel/relion 2022-12-13T10:56:42,764 running install_egg_info 2022-12-13T10:56:42,775 Copying src/relion.egg-info to build/bdist.linux-armv7l/wheel/relion-0.10.25-py3.9.egg-info 2022-12-13T10:56:42,790 running install_scripts 2022-12-13T10:56:42,872 creating build/bdist.linux-armv7l/wheel/relion-0.10.25.dist-info/WHEEL 2022-12-13T10:56:42,874 creating '/tmp/pip-wheel-x7n_7apm/.tmp-32xqerw9/relion-0.10.25-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-13T10:56:42,878 adding 'relion/__init__.py' 2022-12-13T10:56:42,880 adding 'relion/parse_project.py' 2022-12-13T10:56:42,881 adding 'relion/_parser/__init__.py' 2022-12-13T10:56:42,883 adding 'relion/_parser/autopick.py' 2022-12-13T10:56:42,885 adding 'relion/_parser/class2D.py' 2022-12-13T10:56:42,887 adding 'relion/_parser/class3D.py' 2022-12-13T10:56:42,889 adding 'relion/_parser/cryolo.py' 2022-12-13T10:56:42,890 adding 'relion/_parser/ctffind.py' 2022-12-13T10:56:42,892 adding 'relion/_parser/initialmodel.py' 2022-12-13T10:56:42,893 adding 'relion/_parser/jobtype.py' 2022-12-13T10:56:42,895 adding 'relion/_parser/motioncorrection.py' 2022-12-13T10:56:42,896 adding 'relion/_parser/processgraph.py' 2022-12-13T10:56:42,898 adding 'relion/_parser/processnode.py' 2022-12-13T10:56:42,899 adding 'relion/_parser/relativeicethickness.py' 2022-12-13T10:56:42,902 adding 'relion/_parser/relion_pipeline.py' 2022-12-13T10:56:42,904 adding 'relion/cli/__init__.py' 2022-12-13T10:56:42,905 adding 'relion/cli/current_job.py' 2022-12-13T10:56:42,907 adding 'relion/cli/pipeline_viewer.py' 2022-12-13T10:56:42,908 adding 'relion/cli/print_default_options.py' 2022-12-13T10:56:42,909 adding 'relion/cli/project_linker.py' 2022-12-13T10:56:42,911 adding 'relion/cli/run_pipeline.py' 2022-12-13T10:56:42,913 adding 'relion/cryolo_relion_it/__init__.py' 2022-12-13T10:56:42,915 adding 'relion/cryolo_relion_it/cryolo_external_job.py' 2022-12-13T10:56:42,917 adding 'relion/cryolo_relion_it/cryolo_fine_tune_job.py' 2022-12-13T10:56:42,936 adding 'relion/cryolo_relion_it/cryolo_relion_it.py' 2022-12-13T10:56:42,938 adding 'relion/cryolo_relion_it/dls_options.py' 2022-12-13T10:56:42,940 adding 'relion/cryolo_relion_it/fsc_fitting_external_job.py' 2022-12-13T10:56:42,941 adding 'relion/cryolo_relion_it/icebreaker_histogram.py' 2022-12-13T10:56:42,943 adding 'relion/cryolo_relion_it/mask_soft_edge_external_job.py' 2022-12-13T10:56:42,944 adding 'relion/cryolo_relion_it/reconstruct_halves_external_job.py' 2022-12-13T10:56:42,946 adding 'relion/cryolo_relion_it/select_and_split_external_job.py' 2022-12-13T10:56:42,948 adding 'relion/dbmodel/__init__.py' 2022-12-13T10:56:42,949 adding 'relion/dbmodel/dbgraph.py' 2022-12-13T10:56:42,951 adding 'relion/dbmodel/dbnode.py' 2022-12-13T10:56:42,953 adding 'relion/dbmodel/modeltables.py' 2022-12-13T10:56:42,955 adding 'relion/node/__init__.py' 2022-12-13T10:56:42,957 adding 'relion/node/environment.py' 2022-12-13T10:56:42,959 adding 'relion/node/graph.py' 2022-12-13T10:56:42,964 adding 'relion/pipeline/__init__.py' 2022-12-13T10:56:42,965 adding 'relion/pipeline/extra_options.py' 2022-12-13T10:56:42,967 adding 'relion/pipeline/options.py' 2022-12-13T10:56:42,969 adding 'relion/zocalo/__init__.py' 2022-12-13T10:56:42,970 adding 'relion/zocalo/alchemy.py' 2022-12-13T10:56:42,972 adding 'relion/zocalo/images_service_plugin.py' 2022-12-13T10:56:42,973 adding 'relion/zocalo/service.py' 2022-12-13T10:56:42,977 adding 'relion/zocalo/wrapper.py' 2022-12-13T10:56:42,981 adding 'relion-0.10.25.dist-info/LICENSE' 2022-12-13T10:56:42,983 adding 'relion-0.10.25.dist-info/METADATA' 2022-12-13T10:56:42,984 adding 'relion-0.10.25.dist-info/WHEEL' 2022-12-13T10:56:42,985 adding 'relion-0.10.25.dist-info/entry_points.txt' 2022-12-13T10:56:42,986 adding 'relion-0.10.25.dist-info/top_level.txt' 2022-12-13T10:56:42,987 adding 'relion-0.10.25.dist-info/RECORD' 2022-12-13T10:56:42,991 removing build/bdist.linux-armv7l/wheel 2022-12-13T10:56:43,145 Building wheel for relion (pyproject.toml): finished with status 'done' 2022-12-13T10:56:43,153 Created wheel for relion: filename=relion-0.10.25-py3-none-any.whl size=125545 sha256=c8556a44b0b517ef9f7275db7164d91730258a819b4e7a697a7232ea19efc4cb 2022-12-13T10:56:43,154 Stored in directory: /tmp/pip-ephem-wheel-cache-1aalcy1e/wheels/e0/fd/b3/104c275661019dc564ce76aba557d020b0ad76eaf8e378c47c 2022-12-13T10:56:43,168 Successfully built relion 2022-12-13T10:56:43,176 Removed build tracker: '/tmp/pip-build-tracker-b3eiew79'