2022-12-13T20:39:50,028 Created temporary directory: /tmp/pip-ephem-wheel-cache-t6cfup8_ 2022-12-13T20:39:50,033 Created temporary directory: /tmp/pip-build-tracker-gyao8lvj 2022-12-13T20:39:50,034 Initialized build tracking at /tmp/pip-build-tracker-gyao8lvj 2022-12-13T20:39:50,034 Created build tracker: /tmp/pip-build-tracker-gyao8lvj 2022-12-13T20:39:50,034 Entered build tracker: /tmp/pip-build-tracker-gyao8lvj 2022-12-13T20:39:50,036 Created temporary directory: /tmp/pip-wheel-zrh37mp3 2022-12-13T20:39:50,043 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-13T20:39:50,049 Created temporary directory: /tmp/pip-ephem-wheel-cache-72liv8mq 2022-12-13T20:39:50,099 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-13T20:39:50,105 2 location(s) to search for versions of genomicranges: 2022-12-13T20:39:50,105 * https://pypi.org/simple/genomicranges/ 2022-12-13T20:39:50,105 * https://www.piwheels.org/simple/genomicranges/ 2022-12-13T20:39:50,107 Fetching project page and analyzing links: https://pypi.org/simple/genomicranges/ 2022-12-13T20:39:50,108 Getting page https://pypi.org/simple/genomicranges/ 2022-12-13T20:39:50,111 Found index url https://pypi.org/simple 2022-12-13T20:39:50,333 Fetched page https://pypi.org/simple/genomicranges/ as application/vnd.pypi.simple.v1+json 2022-12-13T20:39:50,338 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/09/b1/66124bd9f9466a6670dd49719d48f75e2c8ee39ee62b845fe2281dd5129c/GenomicRanges-0.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2022-12-13T20:39:50,338 Found link https://files.pythonhosted.org/packages/f8/98/3e3203fd5e657991befa44e2dea23ec2df2c2b5573af9accdd3ddb7672b1/GenomicRanges-0.1.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.1 2022-12-13T20:39:50,339 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/31/29/8def5a85d78239bc4ece55984934faf89c0e0fa3afe7eddae7e83603d101/GenomicRanges-0.1.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2022-12-13T20:39:50,340 Found link https://files.pythonhosted.org/packages/fb/c1/73d2c384b0610a85e7024ba57860f4053dcf882b721f75bd4bbc880d1b7a/GenomicRanges-0.1.1.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.1.1 2022-12-13T20:39:50,340 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/77/06/ecbbfbbf9c95a2c5b94e87deceae9f4ab0bb5fd6b6719c0ba734b038fa82/GenomicRanges-0.2-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2022-12-13T20:39:50,341 Found link https://files.pythonhosted.org/packages/ab/ee/46554b3205b22dd5caf2c369f35f4e367c76a1860926f13f4bbf8ba633f7/GenomicRanges-0.2.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.2 2022-12-13T20:39:50,342 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomicranges/ 2022-12-13T20:39:50,342 Getting page https://www.piwheels.org/simple/genomicranges/ 2022-12-13T20:39:50,344 Found index url https://www.piwheels.org/simple 2022-12-13T20:39:50,573 Fetched page https://www.piwheels.org/simple/genomicranges/ as text/html 2022-12-13T20:39:50,577 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1.1-py3-none-any.whl#sha256=6728545e04f3d54afc4ef16ea9e031842e6a1d3db474b34c2dd7b0af700be3d6 (from https://www.piwheels.org/simple/genomicranges/) 2022-12-13T20:39:50,577 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1-py3-none-any.whl#sha256=d2109a9a366cf41f6ee4a8d33fd2c3ec02a2048d4fb5d7468801e434b6c1ee4c (from https://www.piwheels.org/simple/genomicranges/) 2022-12-13T20:39:50,578 Skipping link: not a file: https://www.piwheels.org/simple/genomicranges/ 2022-12-13T20:39:50,578 Skipping link: not a file: https://pypi.org/simple/genomicranges/ 2022-12-13T20:39:50,612 Given no hashes to check 1 links for project 'genomicranges': discarding no candidates 2022-12-13T20:39:50,641 Collecting genomicranges==0.2 2022-12-13T20:39:50,646 Created temporary directory: /tmp/pip-unpack-mgif0cdy 2022-12-13T20:39:50,916 Downloading GenomicRanges-0.2.tar.gz (43 kB) 2022-12-13T20:39:51,201 Added genomicranges==0.2 from https://files.pythonhosted.org/packages/ab/ee/46554b3205b22dd5caf2c369f35f4e367c76a1860926f13f4bbf8ba633f7/GenomicRanges-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-gyao8lvj' 2022-12-13T20:39:51,214 Created temporary directory: /tmp/pip-build-env-yqzyj8jx 2022-12-13T20:39:51,226 Installing build dependencies: started 2022-12-13T20:39:51,228 Running command pip subprocess to install build dependencies 2022-12-13T20:39:53,999 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-12-13T20:39:55,004 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-13T20:39:55,058 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-13T20:39:59,039 Collecting setuptools>=46.1.0 2022-12-13T20:39:59,358 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-13T20:40:00,269 Collecting setuptools_scm[toml]>=5 2022-12-13T20:40:00,307 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.0.5-py3-none-any.whl (42 kB) 2022-12-13T20:40:00,854 Collecting wheel 2022-12-13T20:40:00,900 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-13T20:40:01,202 Collecting typing-extensions 2022-12-13T20:40:01,236 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-12-13T20:40:02,183 Collecting importlib-metadata 2022-12-13T20:40:02,217 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-5.1.0-py3-none-any.whl (21 kB) 2022-12-13T20:40:02,475 Collecting tomli>=1.0.0 2022-12-13T20:40:02,508 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-12-13T20:40:02,920 Collecting packaging>=20.0 2022-12-13T20:40:02,953 Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB) 2022-12-13T20:40:04,539 Collecting zipp>=0.5 2022-12-13T20:40:04,553 Using cached zipp-3.11.0-py3-none-any.whl (6.6 kB) 2022-12-13T20:40:11,937 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2022-12-13T20:40:12,280 Creating /tmp/pip-build-env-yqzyj8jx/overlay/bin 2022-12-13T20:40:12,284 changing mode of /tmp/pip-build-env-yqzyj8jx/overlay/bin/wheel to 755 2022-12-13T20:40:18,101 Successfully installed importlib-metadata-5.1.0 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.0.5 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 zipp-3.11.0 2022-12-13T20:40:18,141 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-13T20:40:18,141 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-13T20:40:18,655 Installing build dependencies: finished with status 'done' 2022-12-13T20:40:18,667 Getting requirements to build wheel: started 2022-12-13T20:40:18,669 Running command Getting requirements to build wheel 2022-12-13T20:40:21,166 running egg_info 2022-12-13T20:40:21,182 writing src/GenomicRanges.egg-info/PKG-INFO 2022-12-13T20:40:21,185 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2022-12-13T20:40:21,191 writing requirements to src/GenomicRanges.egg-info/requires.txt 2022-12-13T20:40:21,193 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2022-12-13T20:40:21,296 listing git files failed - pretending there aren't any 2022-12-13T20:40:21,316 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:21,332 adding license file 'LICENSE.txt' 2022-12-13T20:40:21,342 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:21,571 Getting requirements to build wheel: finished with status 'done' 2022-12-13T20:40:21,599 Created temporary directory: /tmp/pip-modern-metadata-fw903iow 2022-12-13T20:40:21,604 Preparing metadata (pyproject.toml): started 2022-12-13T20:40:21,607 Running command Preparing metadata (pyproject.toml) 2022-12-13T20:40:23,732 running dist_info 2022-12-13T20:40:23,776 creating /tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info 2022-12-13T20:40:23,789 writing /tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/PKG-INFO 2022-12-13T20:40:23,794 writing dependency_links to /tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/dependency_links.txt 2022-12-13T20:40:23,799 writing requirements to /tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/requires.txt 2022-12-13T20:40:23,801 writing top-level names to /tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/top_level.txt 2022-12-13T20:40:23,804 writing manifest file '/tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:23,901 listing git files failed - pretending there aren't any 2022-12-13T20:40:23,921 reading manifest file '/tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:23,931 adding license file 'LICENSE.txt' 2022-12-13T20:40:23,938 writing manifest file '/tmp/pip-modern-metadata-fw903iow/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:23,939 creating '/tmp/pip-modern-metadata-fw903iow/GenomicRanges-0.2.dist-info' 2022-12-13T20:40:24,348 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-13T20:40:24,363 Source in /tmp/pip-wheel-zrh37mp3/genomicranges_84c4de4d2f9541a9aa85840ac9627ecf has version 0.2, which satisfies requirement genomicranges==0.2 from https://files.pythonhosted.org/packages/ab/ee/46554b3205b22dd5caf2c369f35f4e367c76a1860926f13f4bbf8ba633f7/GenomicRanges-0.2.tar.gz 2022-12-13T20:40:24,365 Removed genomicranges==0.2 from https://files.pythonhosted.org/packages/ab/ee/46554b3205b22dd5caf2c369f35f4e367c76a1860926f13f4bbf8ba633f7/GenomicRanges-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-gyao8lvj' 2022-12-13T20:40:24,375 Created temporary directory: /tmp/pip-unpack-citql5kg 2022-12-13T20:40:24,376 Building wheels for collected packages: genomicranges 2022-12-13T20:40:24,386 Created temporary directory: /tmp/pip-wheel-jrwiw24s 2022-12-13T20:40:24,387 Destination directory: /tmp/pip-wheel-jrwiw24s 2022-12-13T20:40:24,392 Building wheel for genomicranges (pyproject.toml): started 2022-12-13T20:40:24,394 Running command Building wheel for genomicranges (pyproject.toml) 2022-12-13T20:40:26,578 running bdist_wheel 2022-12-13T20:40:26,670 running build 2022-12-13T20:40:26,670 running build_py 2022-12-13T20:40:26,692 creating build 2022-12-13T20:40:26,693 creating build/lib 2022-12-13T20:40:26,695 creating build/lib/genomicranges 2022-12-13T20:40:26,698 copying src/genomicranges/_utils.py -> build/lib/genomicranges 2022-12-13T20:40:26,702 copying src/genomicranges/GenomicRanges.py -> build/lib/genomicranges 2022-12-13T20:40:26,710 copying src/genomicranges/gtf.py -> build/lib/genomicranges 2022-12-13T20:40:26,714 copying src/genomicranges/utils.py -> build/lib/genomicranges 2022-12-13T20:40:26,719 copying src/genomicranges/__init__.py -> build/lib/genomicranges 2022-12-13T20:40:26,723 copying src/genomicranges/SeqInfo.py -> build/lib/genomicranges 2022-12-13T20:40:26,726 copying src/genomicranges/ucsc.py -> build/lib/genomicranges 2022-12-13T20:40:26,729 running egg_info 2022-12-13T20:40:26,779 writing src/GenomicRanges.egg-info/PKG-INFO 2022-12-13T20:40:26,782 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2022-12-13T20:40:26,786 writing requirements to src/GenomicRanges.egg-info/requires.txt 2022-12-13T20:40:26,788 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2022-12-13T20:40:26,857 listing git files failed - pretending there aren't any 2022-12-13T20:40:26,876 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:26,883 adding license file 'LICENSE.txt' 2022-12-13T20:40:26,894 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2022-12-13T20:40:26,945 installing to build/bdist.linux-armv7l/wheel 2022-12-13T20:40:26,945 running install 2022-12-13T20:40:27,009 running install_lib 2022-12-13T20:40:27,028 creating build/bdist.linux-armv7l 2022-12-13T20:40:27,029 creating build/bdist.linux-armv7l/wheel 2022-12-13T20:40:27,033 creating build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,035 copying build/lib/genomicranges/_utils.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,040 copying build/lib/genomicranges/GenomicRanges.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,048 copying build/lib/genomicranges/gtf.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,052 copying build/lib/genomicranges/utils.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,057 copying build/lib/genomicranges/__init__.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,061 copying build/lib/genomicranges/SeqInfo.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,064 copying build/lib/genomicranges/ucsc.py -> build/bdist.linux-armv7l/wheel/genomicranges 2022-12-13T20:40:27,068 running install_egg_info 2022-12-13T20:40:27,089 Copying src/GenomicRanges.egg-info to build/bdist.linux-armv7l/wheel/GenomicRanges-0.2-py3.7.egg-info 2022-12-13T20:40:27,113 running install_scripts 2022-12-13T20:40:27,282 creating build/bdist.linux-armv7l/wheel/GenomicRanges-0.2.dist-info/WHEEL 2022-12-13T20:40:27,288 creating '/tmp/pip-wheel-jrwiw24s/.tmp-7mzt6398/GenomicRanges-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-13T20:40:27,308 adding 'genomicranges/GenomicRanges.py' 2022-12-13T20:40:27,313 adding 'genomicranges/SeqInfo.py' 2022-12-13T20:40:27,316 adding 'genomicranges/__init__.py' 2022-12-13T20:40:27,319 adding 'genomicranges/_utils.py' 2022-12-13T20:40:27,322 adding 'genomicranges/gtf.py' 2022-12-13T20:40:27,325 adding 'genomicranges/ucsc.py' 2022-12-13T20:40:27,330 adding 'genomicranges/utils.py' 2022-12-13T20:40:27,333 adding 'GenomicRanges-0.2.dist-info/LICENSE.txt' 2022-12-13T20:40:27,335 adding 'GenomicRanges-0.2.dist-info/METADATA' 2022-12-13T20:40:27,337 adding 'GenomicRanges-0.2.dist-info/WHEEL' 2022-12-13T20:40:27,339 adding 'GenomicRanges-0.2.dist-info/top_level.txt' 2022-12-13T20:40:27,341 adding 'GenomicRanges-0.2.dist-info/RECORD' 2022-12-13T20:40:27,344 removing build/bdist.linux-armv7l/wheel 2022-12-13T20:40:27,602 Building wheel for genomicranges (pyproject.toml): finished with status 'done' 2022-12-13T20:40:27,615 Created wheel for genomicranges: filename=GenomicRanges-0.2-py3-none-any.whl size=22910 sha256=13e5945ef21f2d062b6268ed8399dee27baa6e7f567898334ff5bce7f690c995 2022-12-13T20:40:27,617 Stored in directory: /tmp/pip-ephem-wheel-cache-72liv8mq/wheels/b1/2a/e3/6a89eefaa1c3b2c48dc8f8851ad876c124e5ea540b309af36b 2022-12-13T20:40:27,643 Successfully built genomicranges 2022-12-13T20:40:27,651 Removed build tracker: '/tmp/pip-build-tracker-gyao8lvj'