2022-12-19T06:05:06,626 Created temporary directory: /tmp/pip-ephem-wheel-cache-vs_wkb93
2022-12-19T06:05:06,631 Created temporary directory: /tmp/pip-build-tracker-8q3kkt_v
2022-12-19T06:05:06,632 Initialized build tracking at /tmp/pip-build-tracker-8q3kkt_v
2022-12-19T06:05:06,632 Created build tracker: /tmp/pip-build-tracker-8q3kkt_v
2022-12-19T06:05:06,632 Entered build tracker: /tmp/pip-build-tracker-8q3kkt_v
2022-12-19T06:05:06,641 Created temporary directory: /tmp/pip-wheel-_4xeo348
2022-12-19T06:05:06,649 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-19T06:05:06,654 Created temporary directory: /tmp/pip-ephem-wheel-cache-jm229gvp
2022-12-19T06:05:06,711 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-19T06:05:06,718 2 location(s) to search for versions of scidat:
2022-12-19T06:05:06,718 * https://pypi.org/simple/scidat/
2022-12-19T06:05:06,718 * https://www.piwheels.org/simple/scidat/
2022-12-19T06:05:06,719 Fetching project page and analyzing links: https://pypi.org/simple/scidat/
2022-12-19T06:05:06,720 Getting page https://pypi.org/simple/scidat/
2022-12-19T06:05:06,724 Found index url https://pypi.org/simple
2022-12-19T06:05:06,982 Fetched page https://pypi.org/simple/scidat/ as application/vnd.pypi.simple.v1+json
2022-12-19T06:05:06,989   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/88/a2/6673071adf1204853d0ff89ae77c09a70aca3e639638ca43c0dac8e835e6/scidat-1.0.0-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:06,991   Found link https://files.pythonhosted.org/packages/b0/8f/d9ae0b8645d73be8c1aac28bd29acbbfd427e7e5eeeb9d8949429c163c50/scidat-1.0.0.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.0
2022-12-19T06:05:06,991   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/6a/26/3d24569cd6225b4ff02b8111cffe59ff95b4ba4a47019b18c22833ed39f8/scidat-1.0.1-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:06,993   Found link https://files.pythonhosted.org/packages/18/88/aed02e34944484da746677f0059fb1f48693f189d2e1c74cb1fc70c2ff94/scidat-1.0.1.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.1
2022-12-19T06:05:06,994   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/32/24/2e9ea24910b62c6300bc04c99b31ad5ac93b38e4c938fce42287e9c79677/scidat-1.0.2-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:06,995   Found link https://files.pythonhosted.org/packages/7a/16/e6cf78cce2780d03f4fdec1c09508a4974e955b0ff70f0917594b7f72179/scidat-1.0.2.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.2
2022-12-19T06:05:06,996   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/8a/db/b5582deb259fb51b614e397edfe13df0f3fa8a801cc84a176d6b437acff6/scidat-1.0.3-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:06,997   Found link https://files.pythonhosted.org/packages/c0/4a/67ab1ea652958ae78700610a8250518389be2a2d7e3f1c3fc134f40872d6/scidat-1.0.3.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.3
2022-12-19T06:05:06,998   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/ac/07/2aa2b1260239f90a1f799520ef4d6674cefb2bd7935304c9cc36c211d55a/scidat-1.0.4-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:06,999   Found link https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.4
2022-12-19T06:05:06,999   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/e8/28/cbf04ac7528ee359cd6c4dffaa4dc30cbd32eef4e67d69648e5a5c2ba009/scidat-1.0.5-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:07,001   Found link https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.5
2022-12-19T06:05:07,002 Fetching project page and analyzing links: https://www.piwheels.org/simple/scidat/
2022-12-19T06:05:07,002 Getting page https://www.piwheels.org/simple/scidat/
2022-12-19T06:05:07,005 Found index url https://www.piwheels.org/simple
2022-12-19T06:05:07,211 Fetched page https://www.piwheels.org/simple/scidat/ as text/html
2022-12-19T06:05:07,216   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.3-py3-none-any.whl#sha256=1766afdc090e6eb2603f812f987f21f6c5ba66a97815f6b3a3d9b1b4bd5751fa (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:07,217   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.2-py3-none-any.whl#sha256=814947972c4675126f6d82ff0b1bd6a3293922567a448443026047d2f9c73be2 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:07,218   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.1-py3-none-any.whl#sha256=35754f6e4c4c4573104f78531007860de634fe632c871d8e04590304434cc3a1 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:07,218   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.0-py3-none-any.whl#sha256=0159745c0e753ad128cba8de3f67b6f7666d42cffca0a051c6b76a27fdf963f3 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:05:07,219 Skipping link: not a file: https://www.piwheels.org/simple/scidat/
2022-12-19T06:05:07,219 Skipping link: not a file: https://pypi.org/simple/scidat/
2022-12-19T06:05:07,257 Given no hashes to check 1 links for project 'scidat': discarding no candidates
2022-12-19T06:05:07,287 Collecting scidat==1.0.4
2022-12-19T06:05:07,292   Created temporary directory: /tmp/pip-unpack-rie32zjv
2022-12-19T06:05:07,994   Downloading scidat-1.0.4.tar.gz (19.4 MB)
2022-12-19T06:05:18,284   Added scidat==1.0.4 from https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz to build tracker '/tmp/pip-build-tracker-8q3kkt_v'
2022-12-19T06:05:18,288   Running setup.py (path:/tmp/pip-wheel-_4xeo348/scidat_45d0027da53b401d969d9c7749d56efe/setup.py) egg_info for package scidat
2022-12-19T06:05:18,289   Created temporary directory: /tmp/pip-pip-egg-info-7yt6hu3m
2022-12-19T06:05:18,290   Preparing metadata (setup.py): started
2022-12-19T06:05:18,292   Running command python setup.py egg_info
2022-12-19T06:05:20,791   running egg_info
2022-12-19T06:05:20,796   creating /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info
2022-12-19T06:05:20,857   writing /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/PKG-INFO
2022-12-19T06:05:20,862   writing dependency_links to /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/dependency_links.txt
2022-12-19T06:05:20,865   writing entry points to /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/entry_points.txt
2022-12-19T06:05:20,868   writing requirements to /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/requires.txt
2022-12-19T06:05:20,869   writing top-level names to /tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/top_level.txt
2022-12-19T06:05:20,872   writing manifest file '/tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/SOURCES.txt'
2022-12-19T06:05:21,068   reading manifest file '/tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/SOURCES.txt'
2022-12-19T06:05:21,071   adding license file 'LICENSE'
2022-12-19T06:05:21,076   writing manifest file '/tmp/pip-pip-egg-info-7yt6hu3m/scidat.egg-info/SOURCES.txt'
2022-12-19T06:05:21,278   Preparing metadata (setup.py): finished with status 'done'
2022-12-19T06:05:21,292   Source in /tmp/pip-wheel-_4xeo348/scidat_45d0027da53b401d969d9c7749d56efe has version 1.0.4, which satisfies requirement scidat==1.0.4 from https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz
2022-12-19T06:05:21,294   Removed scidat==1.0.4 from https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz from build tracker '/tmp/pip-build-tracker-8q3kkt_v'
2022-12-19T06:05:21,310 Created temporary directory: /tmp/pip-unpack-u562xeiz
2022-12-19T06:05:21,311 Building wheels for collected packages: scidat
2022-12-19T06:05:21,402   Created temporary directory: /tmp/pip-wheel-mi_2xzm4
2022-12-19T06:05:21,403   Building wheel for scidat (setup.py): started
2022-12-19T06:05:21,405   Destination directory: /tmp/pip-wheel-mi_2xzm4
2022-12-19T06:05:21,405   Running command python setup.py bdist_wheel
2022-12-19T06:05:23,866   running bdist_wheel
2022-12-19T06:05:24,611   running build
2022-12-19T06:05:24,611   running build_py
2022-12-19T06:05:24,680   creating build
2022-12-19T06:05:24,680   creating build/lib
2022-12-19T06:05:24,681   creating build/lib/scidat
2022-12-19T06:05:24,684   copying scidat/__init__.py -> build/lib/scidat
2022-12-19T06:05:24,687   copying scidat/__main__.py -> build/lib/scidat
2022-12-19T06:05:24,691   copying scidat/download.py -> build/lib/scidat
2022-12-19T06:05:24,695   copying scidat/api.py -> build/lib/scidat
2022-12-19T06:05:24,700   copying scidat/annotate.py -> build/lib/scidat
2022-12-19T06:05:24,777   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-12-19T06:05:24,777     setuptools.SetuptoolsDeprecationWarning,
2022-12-19T06:05:24,840   installing to build/bdist.linux-armv7l/wheel
2022-12-19T06:05:24,840   running install
2022-12-19T06:05:24,903   running install_lib
2022-12-19T06:05:24,969   creating build/bdist.linux-armv7l
2022-12-19T06:05:24,969   creating build/bdist.linux-armv7l/wheel
2022-12-19T06:05:24,973   creating build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,974   copying build/lib/scidat/__init__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,978   copying build/lib/scidat/__main__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,983   copying build/lib/scidat/download.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,988   copying build/lib/scidat/api.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,994   copying build/lib/scidat/annotate.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:05:24,998   running install_data
2022-12-19T06:05:25,087   creating build/bdist.linux-armv7l/wheel/scidat-1.0.4.data
2022-12-19T06:05:25,088   creating build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data
2022-12-19T06:05:25,090   copying LICENSE -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,096   copying tests/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,100   copying tests/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,104   copying tests/data/clinical.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,109   copying tests/data/sample_sheet.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,112   copying tests/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,292   copying tests/data/mutation_TCGA-KN-8422_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,295   copying tests/data/manifest.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:25,298   copying tests/data/gdc-client -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:26,126   copying tests/data/mutation_TCGA-A3-3308_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.4.data/data/
2022-12-19T06:05:26,128   running install_egg_info
2022-12-19T06:05:26,284   running egg_info
2022-12-19T06:05:26,347   writing scidat.egg-info/PKG-INFO
2022-12-19T06:05:26,352   writing dependency_links to scidat.egg-info/dependency_links.txt
2022-12-19T06:05:26,356   writing entry points to scidat.egg-info/entry_points.txt
2022-12-19T06:05:26,359   writing requirements to scidat.egg-info/requires.txt
2022-12-19T06:05:26,362   writing top-level names to scidat.egg-info/top_level.txt
2022-12-19T06:05:26,428   reading manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-19T06:05:26,433   adding license file 'LICENSE'
2022-12-19T06:05:26,440   writing manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-19T06:05:26,444   Copying scidat.egg-info to build/bdist.linux-armv7l/wheel/scidat-1.0.4-py3.7.egg-info
2022-12-19T06:05:26,467   running install_scripts
2022-12-19T06:05:26,667   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-12-19T06:05:26,677   creating build/bdist.linux-armv7l/wheel/scidat-1.0.4.dist-info/WHEEL
2022-12-19T06:05:26,681   creating '/tmp/pip-wheel-mi_2xzm4/scidat-1.0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-12-19T06:05:26,686   adding 'scidat/__init__.py'
2022-12-19T06:05:26,690   adding 'scidat/__main__.py'
2022-12-19T06:05:26,696   adding 'scidat/annotate.py'
2022-12-19T06:05:26,703   adding 'scidat/api.py'
2022-12-19T06:05:26,708   adding 'scidat/download.py'
2022-12-19T06:05:26,726   adding 'scidat-1.0.4.data/data/LICENSE'
2022-12-19T06:05:26,730   adding 'scidat-1.0.4.data/data/clinical.txt'
2022-12-19T06:05:26,733   adding 'scidat-1.0.4.data/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv'
2022-12-19T06:05:31,992   adding 'scidat-1.0.4.data/data/gdc-client'
2022-12-19T06:05:32,361   adding 'scidat-1.0.4.data/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt'
2022-12-19T06:05:32,364   adding 'scidat-1.0.4.data/data/manifest.tsv'
2022-12-19T06:05:32,367   adding 'scidat-1.0.4.data/data/mutation_TCGA-A3-3308_20200410.tsv'
2022-12-19T06:05:32,369   adding 'scidat-1.0.4.data/data/mutation_TCGA-KN-8422_20200410.tsv'
2022-12-19T06:05:32,372   adding 'scidat-1.0.4.data/data/sample_sheet.txt'
2022-12-19T06:05:34,185   adding 'scidat-1.0.4.data/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv'
2022-12-19T06:05:34,274   adding 'scidat-1.0.4.dist-info/LICENSE'
2022-12-19T06:05:34,277   adding 'scidat-1.0.4.dist-info/METADATA'
2022-12-19T06:05:34,279   adding 'scidat-1.0.4.dist-info/WHEEL'
2022-12-19T06:05:34,281   adding 'scidat-1.0.4.dist-info/entry_points.txt'
2022-12-19T06:05:34,282   adding 'scidat-1.0.4.dist-info/top_level.txt'
2022-12-19T06:05:34,284   adding 'scidat-1.0.4.dist-info/RECORD'
2022-12-19T06:05:34,956   removing build/bdist.linux-armv7l/wheel
2022-12-19T06:05:35,233   Building wheel for scidat (setup.py): finished with status 'done'
2022-12-19T06:05:35,810   Created wheel for scidat: filename=scidat-1.0.4-py3-none-any.whl size=19437281 sha256=8a7d97c5b27c8899cdeeab84637d527cc3678b27389c00e5ab40e3cf8caa3f0b
2022-12-19T06:05:35,813   Stored in directory: /tmp/pip-ephem-wheel-cache-jm229gvp/wheels/93/09/1f/7d0ee7cc4f22b47f39ba3704f0deac0e8f5c425c044df95f50
2022-12-19T06:05:35,865 Successfully built scidat
2022-12-19T06:05:37,280 Removed build tracker: '/tmp/pip-build-tracker-8q3kkt_v'