2022-12-19T06:12:37,948 Created temporary directory: /tmp/pip-ephem-wheel-cache-142d9q0z
2022-12-19T06:12:37,953 Created temporary directory: /tmp/pip-build-tracker-tcxsm4v4
2022-12-19T06:12:37,954 Initialized build tracking at /tmp/pip-build-tracker-tcxsm4v4
2022-12-19T06:12:37,954 Created build tracker: /tmp/pip-build-tracker-tcxsm4v4
2022-12-19T06:12:37,954 Entered build tracker: /tmp/pip-build-tracker-tcxsm4v4
2022-12-19T06:12:37,956 Created temporary directory: /tmp/pip-wheel-zwmzhi8b
2022-12-19T06:12:37,963 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-19T06:12:37,973 Created temporary directory: /tmp/pip-ephem-wheel-cache-9i1a7jao
2022-12-19T06:12:38,029 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-19T06:12:38,036 2 location(s) to search for versions of scidat:
2022-12-19T06:12:38,036 * https://pypi.org/simple/scidat/
2022-12-19T06:12:38,036 * https://www.piwheels.org/simple/scidat/
2022-12-19T06:12:38,037 Fetching project page and analyzing links: https://pypi.org/simple/scidat/
2022-12-19T06:12:38,038 Getting page https://pypi.org/simple/scidat/
2022-12-19T06:12:38,041 Found index url https://pypi.org/simple
2022-12-19T06:12:38,151 Fetched page https://pypi.org/simple/scidat/ as application/vnd.pypi.simple.v1+json
2022-12-19T06:12:38,158   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/88/a2/6673071adf1204853d0ff89ae77c09a70aca3e639638ca43c0dac8e835e6/scidat-1.0.0-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,160   Found link https://files.pythonhosted.org/packages/b0/8f/d9ae0b8645d73be8c1aac28bd29acbbfd427e7e5eeeb9d8949429c163c50/scidat-1.0.0.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.0
2022-12-19T06:12:38,161   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/6a/26/3d24569cd6225b4ff02b8111cffe59ff95b4ba4a47019b18c22833ed39f8/scidat-1.0.1-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,162   Found link https://files.pythonhosted.org/packages/18/88/aed02e34944484da746677f0059fb1f48693f189d2e1c74cb1fc70c2ff94/scidat-1.0.1.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.1
2022-12-19T06:12:38,163   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/32/24/2e9ea24910b62c6300bc04c99b31ad5ac93b38e4c938fce42287e9c79677/scidat-1.0.2-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,164   Found link https://files.pythonhosted.org/packages/7a/16/e6cf78cce2780d03f4fdec1c09508a4974e955b0ff70f0917594b7f72179/scidat-1.0.2.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.2
2022-12-19T06:12:38,165   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/8a/db/b5582deb259fb51b614e397edfe13df0f3fa8a801cc84a176d6b437acff6/scidat-1.0.3-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,166   Found link https://files.pythonhosted.org/packages/c0/4a/67ab1ea652958ae78700610a8250518389be2a2d7e3f1c3fc134f40872d6/scidat-1.0.3.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.3
2022-12-19T06:12:38,167   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/ac/07/2aa2b1260239f90a1f799520ef4d6674cefb2bd7935304c9cc36c211d55a/scidat-1.0.4-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,168   Found link https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.4
2022-12-19T06:12:38,169   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/e8/28/cbf04ac7528ee359cd6c4dffaa4dc30cbd32eef4e67d69648e5a5c2ba009/scidat-1.0.5-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,170   Found link https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.5
2022-12-19T06:12:38,171 Fetching project page and analyzing links: https://www.piwheels.org/simple/scidat/
2022-12-19T06:12:38,171 Getting page https://www.piwheels.org/simple/scidat/
2022-12-19T06:12:38,174 Found index url https://www.piwheels.org/simple
2022-12-19T06:12:38,406 Fetched page https://www.piwheels.org/simple/scidat/ as text/html
2022-12-19T06:12:38,412   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.4-py3-none-any.whl#sha256=8a7d97c5b27c8899cdeeab84637d527cc3678b27389c00e5ab40e3cf8caa3f0b (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,413   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.3-py3-none-any.whl#sha256=1766afdc090e6eb2603f812f987f21f6c5ba66a97815f6b3a3d9b1b4bd5751fa (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,413   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.2-py3-none-any.whl#sha256=814947972c4675126f6d82ff0b1bd6a3293922567a448443026047d2f9c73be2 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,414   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.1-py3-none-any.whl#sha256=35754f6e4c4c4573104f78531007860de634fe632c871d8e04590304434cc3a1 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,414   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.0-py3-none-any.whl#sha256=0159745c0e753ad128cba8de3f67b6f7666d42cffca0a051c6b76a27fdf963f3 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-19T06:12:38,415 Skipping link: not a file: https://www.piwheels.org/simple/scidat/
2022-12-19T06:12:38,415 Skipping link: not a file: https://pypi.org/simple/scidat/
2022-12-19T06:12:38,449 Given no hashes to check 1 links for project 'scidat': discarding no candidates
2022-12-19T06:12:38,479 Collecting scidat==1.0.5
2022-12-19T06:12:38,488   Created temporary directory: /tmp/pip-unpack-in93kyil
2022-12-19T06:12:38,746   Downloading scidat-1.0.5.tar.gz (19.4 MB)
2022-12-19T06:12:50,718   Added scidat==1.0.5 from https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-tcxsm4v4'
2022-12-19T06:12:50,721   Running setup.py (path:/tmp/pip-wheel-zwmzhi8b/scidat_a5325bd0034a442ba96d9e0e1ddd53cf/setup.py) egg_info for package scidat
2022-12-19T06:12:50,723   Created temporary directory: /tmp/pip-pip-egg-info-enbpbo2t
2022-12-19T06:12:50,723   Preparing metadata (setup.py): started
2022-12-19T06:12:50,725   Running command python setup.py egg_info
2022-12-19T06:12:53,571   running egg_info
2022-12-19T06:12:53,576   creating /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info
2022-12-19T06:12:53,665   writing /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/PKG-INFO
2022-12-19T06:12:53,670   writing dependency_links to /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/dependency_links.txt
2022-12-19T06:12:53,673   writing entry points to /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/entry_points.txt
2022-12-19T06:12:53,675   writing requirements to /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/requires.txt
2022-12-19T06:12:53,677   writing top-level names to /tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/top_level.txt
2022-12-19T06:12:53,680   writing manifest file '/tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/SOURCES.txt'
2022-12-19T06:12:53,961   reading manifest file '/tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/SOURCES.txt'
2022-12-19T06:12:53,964   adding license file 'LICENSE'
2022-12-19T06:12:53,970   writing manifest file '/tmp/pip-pip-egg-info-enbpbo2t/scidat.egg-info/SOURCES.txt'
2022-12-19T06:12:54,174   Preparing metadata (setup.py): finished with status 'done'
2022-12-19T06:12:54,189   Source in /tmp/pip-wheel-zwmzhi8b/scidat_a5325bd0034a442ba96d9e0e1ddd53cf has version 1.0.5, which satisfies requirement scidat==1.0.5 from https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz
2022-12-19T06:12:54,191   Removed scidat==1.0.5 from https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-tcxsm4v4'
2022-12-19T06:12:54,213 Created temporary directory: /tmp/pip-unpack-qk8fxmfh
2022-12-19T06:12:54,214 Building wheels for collected packages: scidat
2022-12-19T06:12:54,223   Created temporary directory: /tmp/pip-wheel-7ndsrch9
2022-12-19T06:12:54,224   Building wheel for scidat (setup.py): started
2022-12-19T06:12:54,227   Destination directory: /tmp/pip-wheel-7ndsrch9
2022-12-19T06:12:54,227   Running command python setup.py bdist_wheel
2022-12-19T06:12:57,073   running bdist_wheel
2022-12-19T06:12:57,931   running build
2022-12-19T06:12:57,932   running build_py
2022-12-19T06:12:58,028   creating build
2022-12-19T06:12:58,029   creating build/lib
2022-12-19T06:12:58,030   creating build/lib/scidat
2022-12-19T06:12:58,032   copying scidat/api.py -> build/lib/scidat
2022-12-19T06:12:58,037   copying scidat/download.py -> build/lib/scidat
2022-12-19T06:12:58,041   copying scidat/__main__.py -> build/lib/scidat
2022-12-19T06:12:58,045   copying scidat/__init__.py -> build/lib/scidat
2022-12-19T06:12:58,048   copying scidat/annotate.py -> build/lib/scidat
2022-12-19T06:12:58,151   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-12-19T06:12:58,152     setuptools.SetuptoolsDeprecationWarning,
2022-12-19T06:12:58,243   installing to build/bdist.linux-armv7l/wheel
2022-12-19T06:12:58,243   running install
2022-12-19T06:12:58,305   running install_lib
2022-12-19T06:12:58,406   creating build/bdist.linux-armv7l
2022-12-19T06:12:58,407   creating build/bdist.linux-armv7l/wheel
2022-12-19T06:12:58,410   creating build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,411   copying build/lib/scidat/api.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,417   copying build/lib/scidat/download.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,422   copying build/lib/scidat/__main__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,427   copying build/lib/scidat/__init__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,430   copying build/lib/scidat/annotate.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-19T06:12:58,434   running install_data
2022-12-19T06:12:58,528   creating build/bdist.linux-armv7l/wheel/scidat-1.0.5.data
2022-12-19T06:12:58,529   creating build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data
2022-12-19T06:12:58,532   copying LICENSE -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,538   copying tests/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,541   copying tests/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,545   copying tests/data/clinical.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,550   copying tests/data/sample_sheet.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,553   copying tests/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,735   copying tests/data/mutation_TCGA-KN-8422_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,738   copying tests/data/manifest.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:58,742   copying tests/data/gdc-client -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:59,632   copying tests/data/mutation_TCGA-A3-3308_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.5.data/data/
2022-12-19T06:12:59,635   running install_egg_info
2022-12-19T06:12:59,895   running egg_info
2022-12-19T06:12:59,984   writing scidat.egg-info/PKG-INFO
2022-12-19T06:12:59,989   writing dependency_links to scidat.egg-info/dependency_links.txt
2022-12-19T06:12:59,992   writing entry points to scidat.egg-info/entry_points.txt
2022-12-19T06:12:59,994   writing requirements to scidat.egg-info/requires.txt
2022-12-19T06:12:59,997   writing top-level names to scidat.egg-info/top_level.txt
2022-12-19T06:13:00,093   reading manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-19T06:13:00,097   adding license file 'LICENSE'
2022-12-19T06:13:00,103   writing manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-19T06:13:00,106   Copying scidat.egg-info to build/bdist.linux-armv7l/wheel/scidat-1.0.5-py3.7.egg-info
2022-12-19T06:13:00,128   running install_scripts
2022-12-19T06:13:00,287   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-12-19T06:13:00,297   creating build/bdist.linux-armv7l/wheel/scidat-1.0.5.dist-info/WHEEL
2022-12-19T06:13:00,301   creating '/tmp/pip-wheel-7ndsrch9/scidat-1.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-12-19T06:13:00,305   adding 'scidat/__init__.py'
2022-12-19T06:13:00,310   adding 'scidat/__main__.py'
2022-12-19T06:13:00,315   adding 'scidat/annotate.py'
2022-12-19T06:13:00,322   adding 'scidat/api.py'
2022-12-19T06:13:00,328   adding 'scidat/download.py'
2022-12-19T06:13:00,345   adding 'scidat-1.0.5.data/data/LICENSE'
2022-12-19T06:13:00,349   adding 'scidat-1.0.5.data/data/clinical.txt'
2022-12-19T06:13:00,352   adding 'scidat-1.0.5.data/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv'
2022-12-19T06:13:05,496   adding 'scidat-1.0.5.data/data/gdc-client'
2022-12-19T06:13:05,865   adding 'scidat-1.0.5.data/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt'
2022-12-19T06:13:05,867   adding 'scidat-1.0.5.data/data/manifest.tsv'
2022-12-19T06:13:05,870   adding 'scidat-1.0.5.data/data/mutation_TCGA-A3-3308_20200410.tsv'
2022-12-19T06:13:05,873   adding 'scidat-1.0.5.data/data/mutation_TCGA-KN-8422_20200410.tsv'
2022-12-19T06:13:05,875   adding 'scidat-1.0.5.data/data/sample_sheet.txt'
2022-12-19T06:13:07,689   adding 'scidat-1.0.5.data/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv'
2022-12-19T06:13:07,778   adding 'scidat-1.0.5.dist-info/LICENSE'
2022-12-19T06:13:07,781   adding 'scidat-1.0.5.dist-info/METADATA'
2022-12-19T06:13:07,783   adding 'scidat-1.0.5.dist-info/WHEEL'
2022-12-19T06:13:07,785   adding 'scidat-1.0.5.dist-info/entry_points.txt'
2022-12-19T06:13:07,787   adding 'scidat-1.0.5.dist-info/top_level.txt'
2022-12-19T06:13:07,788   adding 'scidat-1.0.5.dist-info/RECORD'
2022-12-19T06:13:08,282   removing build/bdist.linux-armv7l/wheel
2022-12-19T06:13:08,558   Building wheel for scidat (setup.py): finished with status 'done'
2022-12-19T06:13:09,138   Created wheel for scidat: filename=scidat-1.0.5-py3-none-any.whl size=19437314 sha256=c42d82a5435cd6d20b14deea3e1e0b900763a5cc6b0b153b81525cbf837867e1
2022-12-19T06:13:09,141   Stored in directory: /tmp/pip-ephem-wheel-cache-9i1a7jao/wheels/9d/e3/c7/caa0b1c5d2e45f973551e4b6abe1505d8df5ebf665fb3e3334
2022-12-19T06:13:09,194 Successfully built scidat
2022-12-19T06:13:10,713 Removed build tracker: '/tmp/pip-build-tracker-tcxsm4v4'