2022-12-20T00:55:09,476 Created temporary directory: /tmp/pip-ephem-wheel-cache-exyj_ayx
2022-12-20T00:55:09,481 Created temporary directory: /tmp/pip-build-tracker-k_2sva7u
2022-12-20T00:55:09,481 Initialized build tracking at /tmp/pip-build-tracker-k_2sva7u
2022-12-20T00:55:09,482 Created build tracker: /tmp/pip-build-tracker-k_2sva7u
2022-12-20T00:55:09,482 Entered build tracker: /tmp/pip-build-tracker-k_2sva7u
2022-12-20T00:55:09,483 Created temporary directory: /tmp/pip-wheel-lq4tl86x
2022-12-20T00:55:09,491 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-20T00:55:09,497 Created temporary directory: /tmp/pip-ephem-wheel-cache-g836enfm
2022-12-20T00:55:09,559 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-20T00:55:09,566 2 location(s) to search for versions of scidat:
2022-12-20T00:55:09,566 * https://pypi.org/simple/scidat/
2022-12-20T00:55:09,566 * https://www.piwheels.org/simple/scidat/
2022-12-20T00:55:09,567 Fetching project page and analyzing links: https://pypi.org/simple/scidat/
2022-12-20T00:55:09,568 Getting page https://pypi.org/simple/scidat/
2022-12-20T00:55:09,571 Found index url https://pypi.org/simple
2022-12-20T00:55:09,800 Fetched page https://pypi.org/simple/scidat/ as application/vnd.pypi.simple.v1+json
2022-12-20T00:55:09,808   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/88/a2/6673071adf1204853d0ff89ae77c09a70aca3e639638ca43c0dac8e835e6/scidat-1.0.0-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,810   Found link https://files.pythonhosted.org/packages/b0/8f/d9ae0b8645d73be8c1aac28bd29acbbfd427e7e5eeeb9d8949429c163c50/scidat-1.0.0.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.0
2022-12-20T00:55:09,811   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/6a/26/3d24569cd6225b4ff02b8111cffe59ff95b4ba4a47019b18c22833ed39f8/scidat-1.0.1-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,812   Found link https://files.pythonhosted.org/packages/18/88/aed02e34944484da746677f0059fb1f48693f189d2e1c74cb1fc70c2ff94/scidat-1.0.1.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.1
2022-12-20T00:55:09,813   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/32/24/2e9ea24910b62c6300bc04c99b31ad5ac93b38e4c938fce42287e9c79677/scidat-1.0.2-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,814   Found link https://files.pythonhosted.org/packages/7a/16/e6cf78cce2780d03f4fdec1c09508a4974e955b0ff70f0917594b7f72179/scidat-1.0.2.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.2
2022-12-20T00:55:09,815   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/8a/db/b5582deb259fb51b614e397edfe13df0f3fa8a801cc84a176d6b437acff6/scidat-1.0.3-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,816   Found link https://files.pythonhosted.org/packages/c0/4a/67ab1ea652958ae78700610a8250518389be2a2d7e3f1c3fc134f40872d6/scidat-1.0.3.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.3
2022-12-20T00:55:09,817   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/ac/07/2aa2b1260239f90a1f799520ef4d6674cefb2bd7935304c9cc36c211d55a/scidat-1.0.4-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,818   Found link https://files.pythonhosted.org/packages/4f/3d/6297a539b8e6e5711679932f467a9068ccf714f1c9136c396e2574aa1501/scidat-1.0.4.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.4
2022-12-20T00:55:09,819   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/e8/28/cbf04ac7528ee359cd6c4dffaa4dc30cbd32eef4e67d69648e5a5c2ba009/scidat-1.0.5-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,820   Found link https://files.pythonhosted.org/packages/8e/70/504cdaae44990ee1bfb687f2ba89ff665e3c7439bee1886370406d2e1231/scidat-1.0.5.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.5
2022-12-20T00:55:09,821   Skipping link: No binaries permitted for scidat: https://files.pythonhosted.org/packages/6e/03/042caace705dd4d2a5d6beb5b5069611608d47543f019576469c0df648b8/scidat-1.0.6-py3-none-any.whl (from https://pypi.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:09,822   Found link https://files.pythonhosted.org/packages/90/5e/7b9afef30b27e7a41d822a0edd6998ef018f980c1d6412ad6549f933d054/scidat-1.0.6.tar.gz (from https://pypi.org/simple/scidat/) (requires-python:>=3.6), version: 1.0.6
2022-12-20T00:55:09,823 Fetching project page and analyzing links: https://www.piwheels.org/simple/scidat/
2022-12-20T00:55:09,824 Getting page https://www.piwheels.org/simple/scidat/
2022-12-20T00:55:09,826 Found index url https://www.piwheels.org/simple
2022-12-20T00:55:12,965 Fetched page https://www.piwheels.org/simple/scidat/ as text/html
2022-12-20T00:55:12,972   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.5-py3-none-any.whl#sha256=c42d82a5435cd6d20b14deea3e1e0b900763a5cc6b0b153b81525cbf837867e1 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,972   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.4-py3-none-any.whl#sha256=8a7d97c5b27c8899cdeeab84637d527cc3678b27389c00e5ab40e3cf8caa3f0b (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,973   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.3-py3-none-any.whl#sha256=1766afdc090e6eb2603f812f987f21f6c5ba66a97815f6b3a3d9b1b4bd5751fa (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,974   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.2-py3-none-any.whl#sha256=814947972c4675126f6d82ff0b1bd6a3293922567a448443026047d2f9c73be2 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,974   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.1-py3-none-any.whl#sha256=35754f6e4c4c4573104f78531007860de634fe632c871d8e04590304434cc3a1 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,975   Skipping link: No binaries permitted for scidat: https://www.piwheels.org/simple/scidat/scidat-1.0.0-py3-none-any.whl#sha256=0159745c0e753ad128cba8de3f67b6f7666d42cffca0a051c6b76a27fdf963f3 (from https://www.piwheels.org/simple/scidat/) (requires-python:>=3.6)
2022-12-20T00:55:12,975 Skipping link: not a file: https://www.piwheels.org/simple/scidat/
2022-12-20T00:55:12,976 Skipping link: not a file: https://pypi.org/simple/scidat/
2022-12-20T00:55:13,011 Given no hashes to check 1 links for project 'scidat': discarding no candidates
2022-12-20T00:55:13,040 Collecting scidat==1.0.6
2022-12-20T00:55:13,045   Created temporary directory: /tmp/pip-unpack-kpkl2xr5
2022-12-20T00:55:13,757   Downloading scidat-1.0.6.tar.gz (19.4 MB)
2022-12-20T00:55:26,575   Added scidat==1.0.6 from https://files.pythonhosted.org/packages/90/5e/7b9afef30b27e7a41d822a0edd6998ef018f980c1d6412ad6549f933d054/scidat-1.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-k_2sva7u'
2022-12-20T00:55:26,579   Running setup.py (path:/tmp/pip-wheel-lq4tl86x/scidat_c17a25099a6b42de9e7dddf05e1af3cc/setup.py) egg_info for package scidat
2022-12-20T00:55:26,581   Created temporary directory: /tmp/pip-pip-egg-info-42ru5wmn
2022-12-20T00:55:26,582   Preparing metadata (setup.py): started
2022-12-20T00:55:26,584   Running command python setup.py egg_info
2022-12-20T00:55:30,172   running egg_info
2022-12-20T00:55:30,177   creating /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info
2022-12-20T00:55:30,293   writing /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/PKG-INFO
2022-12-20T00:55:30,297   writing dependency_links to /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/dependency_links.txt
2022-12-20T00:55:30,301   writing entry points to /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/entry_points.txt
2022-12-20T00:55:30,303   writing requirements to /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/requires.txt
2022-12-20T00:55:30,305   writing top-level names to /tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/top_level.txt
2022-12-20T00:55:30,308   writing manifest file '/tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/SOURCES.txt'
2022-12-20T00:55:30,600   reading manifest file '/tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/SOURCES.txt'
2022-12-20T00:55:30,604   adding license file 'LICENSE'
2022-12-20T00:55:30,609   writing manifest file '/tmp/pip-pip-egg-info-42ru5wmn/scidat.egg-info/SOURCES.txt'
2022-12-20T00:55:30,813   Preparing metadata (setup.py): finished with status 'done'
2022-12-20T00:55:30,828   Source in /tmp/pip-wheel-lq4tl86x/scidat_c17a25099a6b42de9e7dddf05e1af3cc has version 1.0.6, which satisfies requirement scidat==1.0.6 from https://files.pythonhosted.org/packages/90/5e/7b9afef30b27e7a41d822a0edd6998ef018f980c1d6412ad6549f933d054/scidat-1.0.6.tar.gz
2022-12-20T00:55:30,830   Removed scidat==1.0.6 from https://files.pythonhosted.org/packages/90/5e/7b9afef30b27e7a41d822a0edd6998ef018f980c1d6412ad6549f933d054/scidat-1.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-k_2sva7u'
2022-12-20T00:55:30,846 Created temporary directory: /tmp/pip-unpack-k95ierz5
2022-12-20T00:55:30,848 Building wheels for collected packages: scidat
2022-12-20T00:55:30,857   Created temporary directory: /tmp/pip-wheel-f7ykl12c
2022-12-20T00:55:30,858   Building wheel for scidat (setup.py): started
2022-12-20T00:55:30,860   Destination directory: /tmp/pip-wheel-f7ykl12c
2022-12-20T00:55:30,860   Running command python setup.py bdist_wheel
2022-12-20T00:55:33,951   running bdist_wheel
2022-12-20T00:55:34,940   running build
2022-12-20T00:55:34,940   running build_py
2022-12-20T00:55:35,065   creating build
2022-12-20T00:55:35,066   creating build/lib
2022-12-20T00:55:35,067   creating build/lib/scidat
2022-12-20T00:55:35,070   copying scidat/annotate.py -> build/lib/scidat
2022-12-20T00:55:35,076   copying scidat/api.py -> build/lib/scidat
2022-12-20T00:55:35,082   copying scidat/__main__.py -> build/lib/scidat
2022-12-20T00:55:35,086   copying scidat/__init__.py -> build/lib/scidat
2022-12-20T00:55:35,090   copying scidat/download.py -> build/lib/scidat
2022-12-20T00:55:35,205   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-12-20T00:55:35,206     setuptools.SetuptoolsDeprecationWarning,
2022-12-20T00:55:35,303   installing to build/bdist.linux-armv7l/wheel
2022-12-20T00:55:35,304   running install
2022-12-20T00:55:35,367   running install_lib
2022-12-20T00:55:35,475   creating build/bdist.linux-armv7l
2022-12-20T00:55:35,476   creating build/bdist.linux-armv7l/wheel
2022-12-20T00:55:35,480   creating build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,482   copying build/lib/scidat/annotate.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,487   copying build/lib/scidat/api.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,498   copying build/lib/scidat/__main__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,503   copying build/lib/scidat/__init__.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,506   copying build/lib/scidat/download.py -> build/bdist.linux-armv7l/wheel/scidat
2022-12-20T00:55:35,512   running install_data
2022-12-20T00:55:35,608   creating build/bdist.linux-armv7l/wheel/scidat-1.0.6.data
2022-12-20T00:55:35,609   creating build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data
2022-12-20T00:55:35,612   copying LICENSE -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,619   copying tests/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,623   copying tests/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,626   copying tests/data/clinical.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,631   copying tests/data/sample_sheet.txt -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,634   copying tests/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,795   copying tests/data/mutation_TCGA-KN-8422_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,799   copying tests/data/manifest.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:35,802   copying tests/data/gdc-client -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:36,583   copying tests/data/mutation_TCGA-A3-3308_20200410.tsv -> build/bdist.linux-armv7l/wheel/scidat-1.0.6.data/data/
2022-12-20T00:55:36,587   running install_egg_info
2022-12-20T00:55:36,853   running egg_info
2022-12-20T00:55:36,945   writing scidat.egg-info/PKG-INFO
2022-12-20T00:55:36,950   writing dependency_links to scidat.egg-info/dependency_links.txt
2022-12-20T00:55:36,954   writing entry points to scidat.egg-info/entry_points.txt
2022-12-20T00:55:36,957   writing requirements to scidat.egg-info/requires.txt
2022-12-20T00:55:36,960   writing top-level names to scidat.egg-info/top_level.txt
2022-12-20T00:55:37,058   reading manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-20T00:55:37,066   adding license file 'LICENSE'
2022-12-20T00:55:37,073   writing manifest file 'scidat.egg-info/SOURCES.txt'
2022-12-20T00:55:37,077   Copying scidat.egg-info to build/bdist.linux-armv7l/wheel/scidat-1.0.6-py3.7.egg-info
2022-12-20T00:55:37,102   running install_scripts
2022-12-20T00:55:37,263   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-12-20T00:55:37,273   creating build/bdist.linux-armv7l/wheel/scidat-1.0.6.dist-info/WHEEL
2022-12-20T00:55:37,278   creating '/tmp/pip-wheel-f7ykl12c/scidat-1.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-12-20T00:55:37,283   adding 'scidat/__init__.py'
2022-12-20T00:55:37,288   adding 'scidat/__main__.py'
2022-12-20T00:55:37,294   adding 'scidat/annotate.py'
2022-12-20T00:55:37,303   adding 'scidat/api.py'
2022-12-20T00:55:37,309   adding 'scidat/download.py'
2022-12-20T00:55:37,328   adding 'scidat-1.0.6.data/data/LICENSE'
2022-12-20T00:55:37,334   adding 'scidat-1.0.6.data/data/clinical.txt'
2022-12-20T00:55:37,336   adding 'scidat-1.0.6.data/data/d3f73c0f-d518-4e91-b038-a4360495ee27.htseq.counts.tsv'
2022-12-20T00:55:42,496   adding 'scidat-1.0.6.data/data/gdc-client'
2022-12-20T00:55:42,865   adding 'scidat-1.0.6.data/data/jhu-usc.edu_KIRC.HumanMethylation450.6.lvl-3.TCGA-CZ-5989-01A-11D-1670-05.gdc_hg38.txt'
2022-12-20T00:55:42,868   adding 'scidat-1.0.6.data/data/manifest.tsv'
2022-12-20T00:55:42,870   adding 'scidat-1.0.6.data/data/mutation_TCGA-A3-3308_20200410.tsv'
2022-12-20T00:55:42,873   adding 'scidat-1.0.6.data/data/mutation_TCGA-KN-8422_20200410.tsv'
2022-12-20T00:55:42,875   adding 'scidat-1.0.6.data/data/sample_sheet.txt'
2022-12-20T00:55:44,695   adding 'scidat-1.0.6.data/data/tcga_hsapiens_gene_ensembl-GRCh38.p13.csv'
2022-12-20T00:55:44,783   adding 'scidat-1.0.6.dist-info/LICENSE'
2022-12-20T00:55:44,787   adding 'scidat-1.0.6.dist-info/METADATA'
2022-12-20T00:55:44,789   adding 'scidat-1.0.6.dist-info/WHEEL'
2022-12-20T00:55:44,790   adding 'scidat-1.0.6.dist-info/entry_points.txt'
2022-12-20T00:55:44,792   adding 'scidat-1.0.6.dist-info/top_level.txt'
2022-12-20T00:55:44,794   adding 'scidat-1.0.6.dist-info/RECORD'
2022-12-20T00:55:45,356   removing build/bdist.linux-armv7l/wheel
2022-12-20T00:55:45,639   Building wheel for scidat (setup.py): finished with status 'done'
2022-12-20T00:55:46,217   Created wheel for scidat: filename=scidat-1.0.6-py3-none-any.whl size=19437632 sha256=00aef2b76f5f9bf23c245032e07f6820309baecb9d1cbf28ae1529c0d6ee24d9
2022-12-20T00:55:46,220   Stored in directory: /tmp/pip-ephem-wheel-cache-g836enfm/wheels/e9/1a/f4/b3c000ae9ad6d8efb84b1a632bc66be0f285cbcb52fa872286
2022-12-20T00:55:46,273 Successfully built scidat
2022-12-20T00:55:47,756 Removed build tracker: '/tmp/pip-build-tracker-k_2sva7u'