2022-12-21T04:55:13,852 Created temporary directory: /tmp/pip-ephem-wheel-cache-f0dntizp 2022-12-21T04:55:13,854 Created temporary directory: /tmp/pip-build-tracker-bm3a7_19 2022-12-21T04:55:13,855 Initialized build tracking at /tmp/pip-build-tracker-bm3a7_19 2022-12-21T04:55:13,855 Created build tracker: /tmp/pip-build-tracker-bm3a7_19 2022-12-21T04:55:13,855 Entered build tracker: /tmp/pip-build-tracker-bm3a7_19 2022-12-21T04:55:13,856 Created temporary directory: /tmp/pip-wheel-b5vtkf1d 2022-12-21T04:55:13,859 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-21T04:55:13,861 Created temporary directory: /tmp/pip-ephem-wheel-cache-z3ogi18i 2022-12-21T04:55:13,884 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-21T04:55:13,887 2 location(s) to search for versions of scsharp: 2022-12-21T04:55:13,887 * https://pypi.org/simple/scsharp/ 2022-12-21T04:55:13,887 * https://www.piwheels.org/simple/scsharp/ 2022-12-21T04:55:13,887 Fetching project page and analyzing links: https://pypi.org/simple/scsharp/ 2022-12-21T04:55:13,888 Getting page https://pypi.org/simple/scsharp/ 2022-12-21T04:55:13,889 Found index url https://pypi.org/simple 2022-12-21T04:55:13,939 Fetched page https://pypi.org/simple/scsharp/ as application/vnd.pypi.simple.v1+json 2022-12-21T04:55:13,941 Found link https://files.pythonhosted.org/packages/e8/88/35504bc213548325ba5dd333eab9aecbddd362cd290f50cb3d0dea78de79/scSHARP-0.1.2.tar.gz (from https://pypi.org/simple/scsharp/), version: 0.1.2 2022-12-21T04:55:13,941 Found link https://files.pythonhosted.org/packages/d9/18/ce363273a6d6e462983adcf00676ebc0b128b5db9f0b17944db1c3340bc3/scSHARP-0.1.3.tar.gz (from https://pypi.org/simple/scsharp/), version: 0.1.3 2022-12-21T04:55:13,942 Found link https://files.pythonhosted.org/packages/44/c7/9d1f0bf0677f5dbe1d5870139c27917af2f485261c1685e130582cce915c/scSHARP-0.1.4.tar.gz (from https://pypi.org/simple/scsharp/) (requires-python:>=3.8.0), version: 0.1.4 2022-12-21T04:55:13,943 Found link https://files.pythonhosted.org/packages/9e/be/22ac74f75eb6fe826bfd02cfd01734c187716225eaad6d38c4e0c8a2f726/scSHARP-1.0.0.tar.gz (from https://pypi.org/simple/scsharp/) (requires-python:>=3.8.0), version: 1.0.0 2022-12-21T04:55:13,943 Found link https://files.pythonhosted.org/packages/f3/04/6c3fea6c56f408173b6853307bf4e16ad7efecb28e6f11e648e32fd4fda9/scSHARP-1.0.1.tar.gz (from https://pypi.org/simple/scsharp/) (requires-python:>=3.8.0), version: 1.0.1 2022-12-21T04:55:13,944 Fetching project page and analyzing links: https://www.piwheels.org/simple/scsharp/ 2022-12-21T04:55:13,944 Getting page https://www.piwheels.org/simple/scsharp/ 2022-12-21T04:55:13,945 Found index url https://www.piwheels.org/simple 2022-12-21T04:55:14,234 Fetched page https://www.piwheels.org/simple/scsharp/ as text/html 2022-12-21T04:55:14,236 Skipping link: No binaries permitted for scsharp: https://www.piwheels.org/simple/scsharp/scSHARP-1.0.0-py3-none-any.whl#sha256=8bd244f11953dd3b6273df7e1475e079946268d4cffbbd4477a4e44f9ec64e0b (from https://www.piwheels.org/simple/scsharp/) (requires-python:>=3.8.0) 2022-12-21T04:55:14,237 Skipping link: No binaries permitted for scsharp: https://www.piwheels.org/simple/scsharp/scSHARP-0.1.4-py3-none-any.whl#sha256=361316f5c7698b5ca4571dd0a62ae513b2403f939427d9ad0b391dc44329db81 (from https://www.piwheels.org/simple/scsharp/) (requires-python:>=3.8.0) 2022-12-21T04:55:14,237 Skipping link: No binaries permitted for scsharp: https://www.piwheels.org/simple/scsharp/scSHARP-0.1.3-py3-none-any.whl#sha256=06de044d7fac98b15c573c0519b1a6bc04d1b19907ed2e90f57825a1a372a6bf (from https://www.piwheels.org/simple/scsharp/) 2022-12-21T04:55:14,237 Skipping link: No binaries permitted for scsharp: https://www.piwheels.org/simple/scsharp/scSHARP-0.1.2-py3-none-any.whl#sha256=4ca9d80ba1a124e32ab9457f9a7384e3779f9e4e7f606890bd7282bb0f072b15 (from https://www.piwheels.org/simple/scsharp/) 2022-12-21T04:55:14,237 Skipping link: not a file: https://www.piwheels.org/simple/scsharp/ 2022-12-21T04:55:14,238 Skipping link: not a file: https://pypi.org/simple/scsharp/ 2022-12-21T04:55:14,256 Given no hashes to check 1 links for project 'scsharp': discarding no candidates 2022-12-21T04:55:14,273 Collecting scsharp==1.0.1 2022-12-21T04:55:14,275 Created temporary directory: /tmp/pip-unpack-p5c5gryh 2022-12-21T04:55:14,460 Downloading scSHARP-1.0.1.tar.gz (21 kB) 2022-12-21T04:55:14,549 Added scsharp==1.0.1 from https://files.pythonhosted.org/packages/f3/04/6c3fea6c56f408173b6853307bf4e16ad7efecb28e6f11e648e32fd4fda9/scSHARP-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-bm3a7_19' 2022-12-21T04:55:14,550 Running setup.py (path:/tmp/pip-wheel-b5vtkf1d/scsharp_fd5e181566de447484961d28457f3dd9/setup.py) egg_info for package scsharp 2022-12-21T04:55:14,551 Created temporary directory: /tmp/pip-pip-egg-info-jv2az8bk 2022-12-21T04:55:14,551 Preparing metadata (setup.py): started 2022-12-21T04:55:14,552 Running command python setup.py egg_info 2022-12-21T04:55:15,591 running egg_info 2022-12-21T04:55:15,593 creating /tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info 2022-12-21T04:55:15,617 writing /tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/PKG-INFO 2022-12-21T04:55:15,619 writing dependency_links to /tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/dependency_links.txt 2022-12-21T04:55:15,621 writing requirements to /tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/requires.txt 2022-12-21T04:55:15,622 writing top-level names to /tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/top_level.txt 2022-12-21T04:55:15,623 writing manifest file '/tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/SOURCES.txt' 2022-12-21T04:55:15,703 reading manifest file '/tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/SOURCES.txt' 2022-12-21T04:55:15,705 reading manifest template 'MANIFEST.in' 2022-12-21T04:55:15,706 adding license file 'LICENSE.txt' 2022-12-21T04:55:15,709 writing manifest file '/tmp/pip-pip-egg-info-jv2az8bk/scSHARP.egg-info/SOURCES.txt' 2022-12-21T04:55:15,794 Preparing metadata (setup.py): finished with status 'done' 2022-12-21T04:55:15,800 Source in /tmp/pip-wheel-b5vtkf1d/scsharp_fd5e181566de447484961d28457f3dd9 has version 1.0.1, which satisfies requirement scsharp==1.0.1 from https://files.pythonhosted.org/packages/f3/04/6c3fea6c56f408173b6853307bf4e16ad7efecb28e6f11e648e32fd4fda9/scSHARP-1.0.1.tar.gz 2022-12-21T04:55:15,801 Removed scsharp==1.0.1 from https://files.pythonhosted.org/packages/f3/04/6c3fea6c56f408173b6853307bf4e16ad7efecb28e6f11e648e32fd4fda9/scSHARP-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-bm3a7_19' 2022-12-21T04:55:15,807 Created temporary directory: /tmp/pip-unpack-8bw_jc4f 2022-12-21T04:55:15,808 Building wheels for collected packages: scsharp 2022-12-21T04:55:15,812 Created temporary directory: /tmp/pip-wheel-53lz7lwo 2022-12-21T04:55:15,813 Building wheel for scsharp (setup.py): started 2022-12-21T04:55:15,814 Destination directory: /tmp/pip-wheel-53lz7lwo 2022-12-21T04:55:15,814 Running command python setup.py bdist_wheel 2022-12-21T04:55:16,829 running bdist_wheel 2022-12-21T04:55:17,114 running build 2022-12-21T04:55:17,115 running build_py 2022-12-21T04:55:17,141 creating build 2022-12-21T04:55:17,142 creating build/lib 2022-12-21T04:55:17,142 creating build/lib/scSHARP 2022-12-21T04:55:17,143 copying scSHARP/knn_search.py -> build/lib/scSHARP 2022-12-21T04:55:17,145 copying scSHARP/check_tool_accuracy.py -> build/lib/scSHARP 2022-12-21T04:55:17,147 copying scSHARP/__init__.py -> build/lib/scSHARP 2022-12-21T04:55:17,148 copying scSHARP/sc_sharp.py -> build/lib/scSHARP 2022-12-21T04:55:17,150 copying scSHARP/grid_search_generator.py -> build/lib/scSHARP 2022-12-21T04:55:17,152 copying scSHARP/utilities.py -> build/lib/scSHARP 2022-12-21T04:55:17,154 copying scSHARP/pca_model.py -> build/lib/scSHARP 2022-12-21T04:55:17,156 copying scSHARP/interpret.py -> build/lib/scSHARP 2022-12-21T04:55:17,158 copying scSHARP/grid_search.py -> build/lib/scSHARP 2022-12-21T04:55:17,159 copying scSHARP/gcn_model.py -> build/lib/scSHARP 2022-12-21T04:55:17,161 copying scSHARP/test_config.py -> build/lib/scSHARP 2022-12-21T04:55:17,164 creating build/lib/test 2022-12-21T04:55:17,164 copying test/test_model.py -> build/lib/test 2022-12-21T04:55:17,167 copying test/test_config.py -> build/lib/test 2022-12-21T04:55:17,168 copying test/utilties_test.py -> build/lib/test 2022-12-21T04:55:17,171 creating build/lib/docs 2022-12-21T04:55:17,172 creating build/lib/docs/source 2022-12-21T04:55:17,173 copying docs/source/conf.py -> build/lib/docs/source 2022-12-21T04:55:17,174 running egg_info 2022-12-21T04:55:17,230 writing scSHARP.egg-info/PKG-INFO 2022-12-21T04:55:17,232 writing dependency_links to scSHARP.egg-info/dependency_links.txt 2022-12-21T04:55:17,234 writing requirements to scSHARP.egg-info/requires.txt 2022-12-21T04:55:17,235 writing top-level names to scSHARP.egg-info/top_level.txt 2022-12-21T04:55:17,266 reading manifest file 'scSHARP.egg-info/SOURCES.txt' 2022-12-21T04:55:17,269 reading manifest template 'MANIFEST.in' 2022-12-21T04:55:17,270 adding license file 'LICENSE.txt' 2022-12-21T04:55:17,273 writing manifest file 'scSHARP.egg-info/SOURCES.txt' 2022-12-21T04:55:17,279 copying scSHARP/rdriver.r -> build/lib/scSHARP 2022-12-21T04:55:17,281 creating build/lib/scSHARP/configs 2022-12-21T04:55:17,282 copying scSHARP/configs/2_15.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,284 copying scSHARP/configs/2_25.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,286 copying scSHARP/configs/2_40.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,288 copying scSHARP/configs/2_60.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,290 copying scSHARP/configs/3_15.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,292 copying scSHARP/configs/3_25.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,294 copying scSHARP/configs/3_40.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,296 copying scSHARP/configs/3_60.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,298 copying scSHARP/configs/4_15.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,300 copying scSHARP/configs/4_25.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,301 copying scSHARP/configs/4_40.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,303 copying scSHARP/configs/4_60.txt -> build/lib/scSHARP/configs 2022-12-21T04:55:17,335 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-12-21T04:55:17,335 warnings.warn( 2022-12-21T04:55:17,359 installing to build/bdist.linux-armv7l/wheel 2022-12-21T04:55:17,360 running install 2022-12-21T04:55:17,385 running install_lib 2022-12-21T04:55:17,410 creating build/bdist.linux-armv7l 2022-12-21T04:55:17,411 creating build/bdist.linux-armv7l/wheel 2022-12-21T04:55:17,412 creating build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,413 copying build/lib/scSHARP/knn_search.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,415 copying build/lib/scSHARP/check_tool_accuracy.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,418 creating build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,418 copying build/lib/scSHARP/configs/2_40.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,420 copying build/lib/scSHARP/configs/4_40.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,422 copying build/lib/scSHARP/configs/2_25.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,423 copying build/lib/scSHARP/configs/3_15.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,425 copying build/lib/scSHARP/configs/3_40.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,427 copying build/lib/scSHARP/configs/3_60.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,428 copying build/lib/scSHARP/configs/4_15.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,430 copying build/lib/scSHARP/configs/2_15.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,432 copying build/lib/scSHARP/configs/4_25.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,433 copying build/lib/scSHARP/configs/2_60.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,435 copying build/lib/scSHARP/configs/3_25.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,437 copying build/lib/scSHARP/configs/4_60.txt -> build/bdist.linux-armv7l/wheel/scSHARP/configs 2022-12-21T04:55:17,438 copying build/lib/scSHARP/__init__.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,440 copying build/lib/scSHARP/sc_sharp.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,442 copying build/lib/scSHARP/rdriver.r -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,444 copying build/lib/scSHARP/grid_search_generator.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,446 copying build/lib/scSHARP/utilities.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,448 copying build/lib/scSHARP/pca_model.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,450 copying build/lib/scSHARP/interpret.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,451 copying build/lib/scSHARP/grid_search.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,453 copying build/lib/scSHARP/gcn_model.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,455 copying build/lib/scSHARP/test_config.py -> build/bdist.linux-armv7l/wheel/scSHARP 2022-12-21T04:55:17,457 creating build/bdist.linux-armv7l/wheel/test 2022-12-21T04:55:17,458 copying build/lib/test/test_model.py -> build/bdist.linux-armv7l/wheel/test 2022-12-21T04:55:17,460 copying build/lib/test/test_config.py -> build/bdist.linux-armv7l/wheel/test 2022-12-21T04:55:17,462 copying build/lib/test/utilties_test.py -> build/bdist.linux-armv7l/wheel/test 2022-12-21T04:55:17,464 creating build/bdist.linux-armv7l/wheel/docs 2022-12-21T04:55:17,465 creating build/bdist.linux-armv7l/wheel/docs/source 2022-12-21T04:55:17,466 copying build/lib/docs/source/conf.py -> build/bdist.linux-armv7l/wheel/docs/source 2022-12-21T04:55:17,468 running install_egg_info 2022-12-21T04:55:17,497 Copying scSHARP.egg-info to build/bdist.linux-armv7l/wheel/scSHARP-1.0.1-py3.9.egg-info 2022-12-21T04:55:17,509 running install_scripts 2022-12-21T04:55:17,588 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2022-12-21T04:55:17,594 creating build/bdist.linux-armv7l/wheel/scSHARP-1.0.1.dist-info/WHEEL 2022-12-21T04:55:17,596 creating '/tmp/pip-wheel-53lz7lwo/scSHARP-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-21T04:55:17,599 adding 'docs/source/conf.py' 2022-12-21T04:55:17,600 adding 'scSHARP/__init__.py' 2022-12-21T04:55:17,602 adding 'scSHARP/check_tool_accuracy.py' 2022-12-21T04:55:17,603 adding 'scSHARP/gcn_model.py' 2022-12-21T04:55:17,605 adding 'scSHARP/grid_search.py' 2022-12-21T04:55:17,606 adding 'scSHARP/grid_search_generator.py' 2022-12-21T04:55:17,607 adding 'scSHARP/interpret.py' 2022-12-21T04:55:17,608 adding 'scSHARP/knn_search.py' 2022-12-21T04:55:17,609 adding 'scSHARP/pca_model.py' 2022-12-21T04:55:17,610 adding 'scSHARP/rdriver.r' 2022-12-21T04:55:17,613 adding 'scSHARP/sc_sharp.py' 2022-12-21T04:55:17,614 adding 'scSHARP/test_config.py' 2022-12-21T04:55:17,617 adding 'scSHARP/utilities.py' 2022-12-21T04:55:17,618 adding 'scSHARP/configs/2_15.txt' 2022-12-21T04:55:17,619 adding 'scSHARP/configs/2_25.txt' 2022-12-21T04:55:17,620 adding 'scSHARP/configs/2_40.txt' 2022-12-21T04:55:17,621 adding 'scSHARP/configs/2_60.txt' 2022-12-21T04:55:17,622 adding 'scSHARP/configs/3_15.txt' 2022-12-21T04:55:17,623 adding 'scSHARP/configs/3_25.txt' 2022-12-21T04:55:17,624 adding 'scSHARP/configs/3_40.txt' 2022-12-21T04:55:17,626 adding 'scSHARP/configs/3_60.txt' 2022-12-21T04:55:17,627 adding 'scSHARP/configs/4_15.txt' 2022-12-21T04:55:17,628 adding 'scSHARP/configs/4_25.txt' 2022-12-21T04:55:17,629 adding 'scSHARP/configs/4_40.txt' 2022-12-21T04:55:17,630 adding 'scSHARP/configs/4_60.txt' 2022-12-21T04:55:17,632 adding 'test/test_config.py' 2022-12-21T04:55:17,634 adding 'test/test_model.py' 2022-12-21T04:55:17,635 adding 'test/utilties_test.py' 2022-12-21T04:55:17,636 adding 'scSHARP-1.0.1.dist-info/LICENSE.txt' 2022-12-21T04:55:17,637 adding 'scSHARP-1.0.1.dist-info/METADATA' 2022-12-21T04:55:17,638 adding 'scSHARP-1.0.1.dist-info/WHEEL' 2022-12-21T04:55:17,639 adding 'scSHARP-1.0.1.dist-info/top_level.txt' 2022-12-21T04:55:17,640 adding 'scSHARP-1.0.1.dist-info/RECORD' 2022-12-21T04:55:17,642 removing build/bdist.linux-armv7l/wheel 2022-12-21T04:55:17,761 Building wheel for scsharp (setup.py): finished with status 'done' 2022-12-21T04:55:17,764 Created wheel for scsharp: filename=scSHARP-1.0.1-py3-none-any.whl size=28458 sha256=feefbda937fcc0b755befcdc22f02161f98187ae5901e09af0b4c8192c5bc661 2022-12-21T04:55:17,765 Stored in directory: /tmp/pip-ephem-wheel-cache-z3ogi18i/wheels/db/ef/ac/c60260ac40dadcfd58d7fe532163dc005c63bb3c788d1a191e 2022-12-21T04:55:17,778 Successfully built scsharp 2022-12-21T04:55:17,783 Removed build tracker: '/tmp/pip-build-tracker-bm3a7_19'