2022-12-23T04:01:43,319 Created temporary directory: /tmp/pip-ephem-wheel-cache-typbl11r
2022-12-23T04:01:43,321 Created temporary directory: /tmp/pip-build-tracker-hn8g2mn2
2022-12-23T04:01:43,321 Initialized build tracking at /tmp/pip-build-tracker-hn8g2mn2
2022-12-23T04:01:43,322 Created build tracker: /tmp/pip-build-tracker-hn8g2mn2
2022-12-23T04:01:43,322 Entered build tracker: /tmp/pip-build-tracker-hn8g2mn2
2022-12-23T04:01:43,322 Created temporary directory: /tmp/pip-wheel-nvm99dvn
2022-12-23T04:01:43,325 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-23T04:01:43,328 Created temporary directory: /tmp/pip-ephem-wheel-cache-7vwzqi62
2022-12-23T04:01:43,354 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-23T04:01:43,358 2 location(s) to search for versions of gemmi:
2022-12-23T04:01:43,358 * https://pypi.org/simple/gemmi/
2022-12-23T04:01:43,358 * https://www.piwheels.org/simple/gemmi/
2022-12-23T04:01:43,358 Fetching project page and analyzing links: https://pypi.org/simple/gemmi/
2022-12-23T04:01:43,358 Getting page https://pypi.org/simple/gemmi/
2022-12-23T04:01:43,360 Found index url https://pypi.org/simple
2022-12-23T04:01:43,434 Fetched page https://pypi.org/simple/gemmi/ as application/vnd.pypi.simple.v1+json
2022-12-23T04:01:43,517   Found link https://files.pythonhosted.org/packages/3d/74/21e7705118e1f4ac86f03f99a71dc2ba33b8a73fef727be638ee054886e6/gemmi-0.1.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.2
2022-12-23T04:01:43,518   Found link https://files.pythonhosted.org/packages/13/89/4369460dd34f3e7f46c4ec44765cf9f79e392cf3faa8b3792285db77c61f/gemmi-0.1.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.3
2022-12-23T04:01:43,518   Found link https://files.pythonhosted.org/packages/fb/18/819ab7731075516bb422586a97a4e59313259fa60e49642e26859fe0ef76/gemmi-0.1.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.4
2022-12-23T04:01:43,518   Found link https://files.pythonhosted.org/packages/d4/d5/85a0fecb747b415fcc6e3fee9f48edab936e6339ec50736abe1dcfc0d460/gemmi-0.1.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.5
2022-12-23T04:01:43,519   Found link https://files.pythonhosted.org/packages/e5/96/664c971ddae50eb00ff9ee39ce8db4e3f481a1ca740583081a1a84146d39/gemmi-0.1.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.6
2022-12-23T04:01:43,519   Found link https://files.pythonhosted.org/packages/e5/41/e51478a35846a23ef2764d9a36ced90e63eafd49c7a4c85559b0566c3884/gemmi-0.1.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.7
2022-12-23T04:01:43,519   Found link https://files.pythonhosted.org/packages/20/bd/36cb4b950bbe78d5a4e3fd1c127100894fc97d059db57771fa1fd1ce9f2b/gemmi-0.2.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.0
2022-12-23T04:01:43,519   Found link https://files.pythonhosted.org/packages/d1/2a/7cb4d0fbc88af06fe42971bfebbbefa670a156b396a9d59fb428809977c4/gemmi-0.2.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.1
2022-12-23T04:01:43,520   Found link https://files.pythonhosted.org/packages/09/bd/2d15c8e32c28b11d3f781293a3c828834874bf0c17d193a65a0ab4e781df/gemmi-0.2.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.2
2022-12-23T04:01:43,520   Found link https://files.pythonhosted.org/packages/2b/d5/15ac654339e17b64f6c4c3d07cea51f6f329eeee1ba01ad58536279fd400/gemmi-0.2.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.3
2022-12-23T04:01:43,520   Found link https://files.pythonhosted.org/packages/32/fa/781063687c6e47133a8c39b142a10573546153dde6f5558e9802690bb184/gemmi-0.2.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.4
2022-12-23T04:01:43,521   Found link https://files.pythonhosted.org/packages/8b/d5/92f78ebb4734212283301730b193bd44f3ea74161bfd413939a88e976f67/gemmi-0.2.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.7
2022-12-23T04:01:43,521   Found link https://files.pythonhosted.org/packages/4b/4b/51d357ef35fcf27a5325426b9326498ab1482be37efbc06a92202f921407/gemmi-0.2.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.8
2022-12-23T04:01:43,521   Found link https://files.pythonhosted.org/packages/e0/9c/6ea8ea2bbda7ab9eb8b548d899cc328aabd9cf04c720e1cd3287fcd00544/gemmi-0.3.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.0
2022-12-23T04:01:43,521   Found link https://files.pythonhosted.org/packages/e5/ed/6a91e0fe126a30842c93bfa3865dab81d8383a12026c034edfdf5bf60f85/gemmi-0.3.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.1
2022-12-23T04:01:43,522   Found link https://files.pythonhosted.org/packages/5d/86/6cef13dcfd9b5f3101e826f35fd54088942496489b9307480185fe63d2ed/gemmi-0.3.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.2
2022-12-23T04:01:43,522   Found link https://files.pythonhosted.org/packages/af/9d/ce0bdf384249da75e4584b624f5a144366a3c8eceff2dff19236aff08dd1/gemmi-0.3.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.3
2022-12-23T04:01:43,522   Found link https://files.pythonhosted.org/packages/b3/b8/1f41f9a0849c5011cb890f89b6548c8dec1b52ee4bf28cb0ebe3728016e9/gemmi-0.3.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.4
2022-12-23T04:01:43,523   Found link https://files.pythonhosted.org/packages/f4/f0/f4cd4d29e53707efccb2e6d4b2c185851dc1ef02f7aa041b9803fb1a8590/gemmi-0.3.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.5
2022-12-23T04:01:43,523   Found link https://files.pythonhosted.org/packages/39/b1/9ca0ad395150af606cf85a2e45c2dfaab02492d36ff264efdcf25f7479c1/gemmi-0.3.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.6
2022-12-23T04:01:43,523   Found link https://files.pythonhosted.org/packages/99/ff/0da30f43421b952256ba77edf0eee9bc0711715a4687489ee33037a1f132/gemmi-0.3.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.7
2022-12-23T04:01:43,523   Found link https://files.pythonhosted.org/packages/06/4f/5e2e02aa93bcdf27b54f810ecda6e3d08b962d8ef27c9fa731f04523dc80/gemmi-0.3.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.8
2022-12-23T04:01:43,524   Found link https://files.pythonhosted.org/packages/c0/4d/7567aed9911e6f62021508d72deae27d7f1e5dcb41032c4d642c01158408/gemmi-0.4.0.post1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.0.post1
2022-12-23T04:01:43,524   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/da/3fb440c7b946febcc4fdb3f4928b1e93b2627ccdf26d69962f3c05b8f077/gemmi-0.4.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,524   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/88/8c/72cd48a1e89ad92f24e67d15545b9e3f478f256fb4729dbbb4985a0efe2f/gemmi-0.4.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,524   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/84/0162cc2197241200740655ebe6cfd33342ddb152feca089f98aab91f56b0/gemmi-0.4.1-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,524   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/3a/c69ec458774b60d61a929ac2357d0b9c0a0b5187e55cdb75e138cefee2d3/gemmi-0.4.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,525   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c2/a2/55410bfd6be3391475c2a005fcde251f843e0d117707dacb07bb880d2b21/gemmi-0.4.1-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,525   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/a4/361f66459b444340a29c1dbeb81918dccfab580f92752571a361b53c80fe/gemmi-0.4.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,525   Found link https://files.pythonhosted.org/packages/2f/d5/4ca93e1691bd8cb2d1e06ce4ff816eca300aa4e09416caf45bbb6451f013/gemmi-0.4.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.1
2022-12-23T04:01:43,525   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/03/599bf3752327fdbc408133daf5d6a7b950d72c4d81f20d8d3b2d8e95be85/gemmi-0.4.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,526   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/aa/f03b573d7333211fda34ad2c7dddbb4b7310fcf9caf7e938318208819049/gemmi-0.4.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,526   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/eb/d55b627cd8cb0f9bd3fc076afdd8b3b999316d6c4c24b6b703b97730ffab/gemmi-0.4.2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,526   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/6a/fe1a65806633ea2129507b0f8b4034afdbf383e474a12152839ee50a52eb/gemmi-0.4.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,526   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/59/a4976acb0891bc600c161f08c341666daf419885f07a105e335e1aeeecb7/gemmi-0.4.2-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,526   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/f9/0e3c3e3cbb2116fa23a1fe815542a971a5775cd7ada9d02ffd5d58fcde85/gemmi-0.4.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,527   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/95/85635908935957b4ccc1700dafdcd0c309e00a4a3291aa7a8d6c65a5f089/gemmi-0.4.2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,527   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bf/5e/2dcb2454003be5505eb7a75b5eecde74486d2a1bea2f189fc30c749076e6/gemmi-0.4.2-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,527   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/8d/055161b661f3dcebbd1cfa3c55ba02ab7f434d87147481b3566080a4ccac/gemmi-0.4.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,527   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/82/a45cb30c350b56f4dc628986b84b91310b88e1b2ac73ae3b37c3a1ac8585/gemmi-0.4.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,527   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/39/784a739b8d83175667ef1cc85a53acbe79b9437292031225b3ed552bc035/gemmi-0.4.2-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,528   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/62/8911a99982bc95e629f41a7096f0f907cf4b001ed6c0087e0a2763c943e1/gemmi-0.4.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,528   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/9b/d75a5882a9bb13d47e99e0552b516e330004b411e4547b37a3743c74976b/gemmi-0.4.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,528   Found link https://files.pythonhosted.org/packages/a4/ac/b850ac03ad0f899c0c8f699af60b5c515291c74470601e3b12803d6fca2e/gemmi-0.4.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.2
2022-12-23T04:01:43,528   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/23/72/c5e726b2722bdfbbb82847582ff64caaf60f70ca38adf11946561fbc75ce/gemmi-0.4.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,528   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/cf/5a9f3534db7e32658104b69e8a631c4fcf9a4bff7b8d38dca572bb6ed5d7/gemmi-0.4.3-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,529   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d4/8b/c55499a4d0d2a155c4c4ce220a2a942f0026909f4ec849609fc6688eb5a4/gemmi-0.4.3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,529   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c4/d3239cd44ce93e14454e2f6596a723f5245776fe822238ac0473ef6d81d4/gemmi-0.4.3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,529   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/b9/4821a0951160692524e8394629b952337ad0fbe111b5cf26dc56a9c8e59e/gemmi-0.4.3-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,529   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6a/52/e2813c31a8d080649737308823e85d17324defb683a61e853beea00ed63e/gemmi-0.4.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,529   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b1/91/659f69913777cc1fa590f25f5831d9803c9681923690e426af680d9380cd/gemmi-0.4.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,530   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/c9/e78fbd8a8d48f13c9da4e6afc4941bbf40142e6423d487335f8fcf46e2db/gemmi-0.4.3-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,530   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/6e/0ab2f8a07c42a54d6e6fda65549ff13a081c94601f084f795a380a8f14d2/gemmi-0.4.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,530   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/43/aa263331953f26ee8cf573129576a87252c4667686b04280e2e2d46a1ef7/gemmi-0.4.3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,530   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/37/dd827724ae053469469c4dc3f050b5b16093195fa50030a202a593fb380a/gemmi-0.4.3-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,530   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/15/4460162edf9aea5c568b6fbdf2b55536800b32e639064db8fb112c779edf/gemmi-0.4.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,531   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/35/e8b97d567e27090876330931af7a5f097aed5387067718a25a9d4225ff82/gemmi-0.4.3-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,531   Found link https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.3
2022-12-23T04:01:43,531   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/88/e074befd61f9abbc617edd24283bf642869882c023b2da5cf78bbbe8b967/gemmi-0.4.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,531   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/f0/47da82d4ba10f1d15a212d74c9d712158b994bde8115f9d6d01f5c4ebe6f/gemmi-0.4.4-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,532   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/b6/28f2a87d7e189fe9604897e13fd05a881a7933d7d293fc04efdbc6ad436b/gemmi-0.4.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,532   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/06/0c6eda981f85fb5f1633d19c8ce0cbd2d8fcf5677b5d563740241737ac90/gemmi-0.4.4-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,532   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/66/c696b84cab12dcc9c41f4d59eb767ed681359a0eafd331d9dfe5bab42b8c/gemmi-0.4.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,532   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/ed/d6745f20401fa9383ec0f166120c8f1d569795d5dc75601386e9811e587e/gemmi-0.4.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,532   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dc/18/0b5127d8f84979f371d588a323047483a22604eadb457ce9cee709895f29/gemmi-0.4.4-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/62/eea9c84d0e37df89b34c03b562522556419c080462c92eede3ccb9697625/gemmi-0.4.4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/62/78cbc5c9e8f68a84547621a5d42ae22560c0215f918a6c8e007835a59e8a/gemmi-0.4.4-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/86/7258f7f4797308e3750c30ec16d9850dac8d0e865fc1d2fcd18e345ff82d/gemmi-0.4.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/44/c8cd594bc8075226ec1d38c330eb412650e75d9899db7c160b96b788fe5f/gemmi-0.4.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/68/832c4428629c200710b73ab360bbf3cbbe7bdff439618e06c136efb083a4/gemmi-0.4.4-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,533   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/02/b1edf3ca6e2bbc04d5bf9223ca53571a6dec25156b708bc4303352f4f8b1/gemmi-0.4.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,534   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/13/2f/37bbe81cdad4ad391102f85f660dddc3b9c69a9babb79edf7a546bb00a34/gemmi-0.4.4-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,534   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e0/3b/624099e50f36dccf6adf402c5c30f8aa788a29e7a7daa0814ffc2b029438/gemmi-0.4.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,534   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/e6/54a757bb93d5e818d3c2a9a2c78c4ce2d929831e82248e2bbdfc8b83a5a4/gemmi-0.4.4-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,534   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/61/12/f0e468abe27ca297d48739409f91ae7c8316179eb46e7d6566ef6f8531f0/gemmi-0.4.4-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,534   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/25/f86bf28f87680c7acfc0366eaeef544af75c17480777e9572f845b73a9ae/gemmi-0.4.4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,535   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/0b/5ed3cfbd0bc92abf4bed4dd765ed5c3aa639ff2500abe9855c6178f4a8f5/gemmi-0.4.4-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,535   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/54/78bf9f5257e928db4a5c3464ac0258b2e7c8ddfb01103dd2278bfc996a1c/gemmi-0.4.4-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,535   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/73/b1274d1b4e946992e17c6260498e2538744eb33003b17d9d9a8ee0560b32/gemmi-0.4.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,535   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/44/e9f31da6e5d63564620ccdfa8fbd811a7056d0ea114874273a8357b14284/gemmi-0.4.4-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,535   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/3e/d823ff5a6fa3dcf98a6460ee281c82f73c384f27467d869018b674aa7636/gemmi-0.4.4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,536   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/14/73eda6090c1a6062c6428762e3b722856dada25bfff509532ccd1b039c87/gemmi-0.4.4-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,536   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/f7/2b4825646ab5c6afaa50858c97267cbc2b234b6e99a43d956924c6518f0e/gemmi-0.4.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,536   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/34/8bdb8d15ead8117585bec881c80a62983fbd74ebc1b08bf164f15d5f97c7/gemmi-0.4.4-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,536   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/14/dd376612fc3899f68d83d60d1988f89402dd0c8f4a7010006b2f567f0d71/gemmi-0.4.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,536   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/39/e1cdaf64ff7d3c7c7b7e186e3f9f32b9957dd9644263e0879555cc2aebe4/gemmi-0.4.4-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,537   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/37/89532fece5b13a637174902bf5719cc6546c77b19b6a26e0292fc7cf8898/gemmi-0.4.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,537   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/be/1dbdfd3831075a2920c4c3cecb9178dba6f270d77995c773d65a8e16a701/gemmi-0.4.4-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,537   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/7d/3c1fab59be120cdfb4d5f2500b58864c55467381533564babcd43f8fd012/gemmi-0.4.4-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,537   Found link https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.4
2022-12-23T04:01:43,537   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/89/62715a67fdbec732441eefb9ab39bd62f7f43334ac4015b791b977be68c5/gemmi-0.4.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,538   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/39/c38fa021a44e9343cc886722365d453cf364e2a5a67c285bb328b20ff540/gemmi-0.4.5-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,538   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f7/18/b755993b408896b60e4852f9107331006a1b99c83926a948c9b4b27aab32/gemmi-0.4.5-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,538   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/57/51/0c582b5adc6cb799a6b87766c498fe7144f792cba2c70b6e4ff31542e874/gemmi-0.4.5-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,538   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/a8/12c264b0b6d417ac551fdceb2fd5ac3e0bb2e2a83f4931c8f86135b2df4d/gemmi-0.4.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,538   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/b2/660f35b80809bd4f75f2b8f5dd356f1b3b3ee6b999e6811743c68c0dc308/gemmi-0.4.5-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,539   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/44/f25c57803987a15bea2c24d638da47e8e778fd53acb194e1757523778938/gemmi-0.4.5-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,539   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/9d/58f15c2552bfc071f973eec23499c9d6a1b8dc0ce60c7997e49a7402ec91/gemmi-0.4.5-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,539   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/f0/bfa6c95e9071a4061d60c1240f6d5c1dccec497bfbc4a78e9dd0d5d261fa/gemmi-0.4.5-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,539   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/11/448e121ac8ac7217b6f7cc570a6d26bc51d27858c78bc533b6c2a7640b8e/gemmi-0.4.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,539   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/72/77ea0f799d73d54999181ddd615206492343ada2617996f7169acab168ec/gemmi-0.4.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,540   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/0b/52ea2dd8bb3d311e441674a79cee4dd490140865595473cb222096c8cdc4/gemmi-0.4.5-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,540   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/0d/a91f70f43b8a0732f82739b3abac31fc6d363c229395308205b87d383045/gemmi-0.4.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,540   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/1e/57b1c8dd3d6b918198328579e69ce68f7b0df2d7021fe9b7dac55d7e9cb6/gemmi-0.4.5-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,540   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/26/3683d8c49bae1ee13b96911f28006a90163eb65778695c2e67939c4bc37c/gemmi-0.4.5-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,540   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/69/e1/b12f90c4962282c329afdc1a4c9cb7475dda068ec1e0a815209010621c83/gemmi-0.4.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,541   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/90/276372a683c5687081103062ebc8e535181d9eff9ecf4eee42c9081be19f/gemmi-0.4.5-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,541   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/e5/da6409d8b6d9850036c3ef87e460336c6231b1e0c3bb95f34dd0aaf3836b/gemmi-0.4.5-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,541   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/8e/1764f1045f32c0bfb1d2901ac8b75fbe97e1e392b355ee9af815cf38ef57/gemmi-0.4.5-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,541   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/2f/73a7b609eac9a9c71e7bff951c2e100e407da14c5a214dc18eda13eb4141/gemmi-0.4.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,541   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/d4/4208b738e30605318d8f26090bc4380846040f98ded22271e7e4ca46d2c5/gemmi-0.4.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,542   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/ab46b8088defeb988d95646598ba860a8a627231198d45ce61a3605ba00b/gemmi-0.4.5-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,542   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/2c/663a099339e2bc8294891757038496434774ac16c65a2798cc431e206a55/gemmi-0.4.5-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,542   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/f1/13a68d2f9a11b3664e0e1de4d79326cd67862bca4f5c49ee4bef2514b9db/gemmi-0.4.5-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,542   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/82/f72b3028dd1a01369dab40d8943011dd96bd56d7d019b848b9545345a50b/gemmi-0.4.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,542   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ee/6c/c0b2f77136489e9aada94adf29c586fa51e982d63cb162b71f598aa52e4a/gemmi-0.4.5-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,543   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/62/0b7d622c7961f0df3818fd1e56d398c7c723ddacb9eaf864d1c729fc8e22/gemmi-0.4.5-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,543   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/b1/c48b5b6c866bc104ad5ad0667d4133d9185a982928235270332fb8a21436/gemmi-0.4.5-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,543   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/13/721e4b76e5db2f9549ba22f0c42181d25c936a9a7d17ad2640aaf91ee38e/gemmi-0.4.5-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,543   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/e5/ac1318a6fdd197e1a1b039658efb59afbd1abbb44ea9789fd0c6b9b49724/gemmi-0.4.5-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,543   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/bf/c3c250e76b72ececf8b9b4c46c5d53bf2f321a97137bda5c791061b2eb4d/gemmi-0.4.5-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,544   Found link https://files.pythonhosted.org/packages/cb/de/3009e2c600cdface74bc3cd3a61abe573a1795494884caabce654f7d9b67/gemmi-0.4.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.5
2022-12-23T04:01:43,544   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/fc/4278f6a11da18b4797458633032cb0a7e8babfd94e69285761ede60f972c/gemmi-0.4.6-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,544   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2b/9f4b2fa9e86ad506c5d66d1e6eb2b2e71fa2895f2675250f0a8f314ad322/gemmi-0.4.6-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,544   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/7f/10630937c391f27987c18f19aa42c4594ddb39e0b0f5302f0dfec4aa4428/gemmi-0.4.6-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,544   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/fb/798923bf3741e91253a24491049b57590469a7f50cb3cc9253fcf60945d0/gemmi-0.4.6-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,545   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/74/b4ea05a4bf76367e0ad27b4c5bc02c2ed31c32bdd2386378d72c90175c59/gemmi-0.4.6-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,545   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/10/23fa05a07b6df83608aa59cc238f74e84d8058ad2ae310bdbb47d1c81f85/gemmi-0.4.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,545   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/55/e8ba86967640ea9c436a8dda39164837d45e7ee5f7fe6688ec9e52ceec81/gemmi-0.4.6-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,545   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/03/7cd6b99f2d8ce8ac485e7550e476ff0d752b5743486de3a953ba162f8ae7/gemmi-0.4.6-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,545   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ed/2d/e80e5393bfaea7be595bcf6ace407e0042b28496e510b38395476c9a7836/gemmi-0.4.6-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,546   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/1c/1ebdff39cfc9cecab2445b22e1b480d458c253dac3e9017c3d76451e908f/gemmi-0.4.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,546   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/94/f0/1a405fed888d6d3aba90bfcdf11b6e12655202b728ff2a035e3f5ff11297/gemmi-0.4.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,546   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/51/51/71162451f2e331bd46c154b2673f38823559e90989d5e5c1196f8fd9565b/gemmi-0.4.6-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,546   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/29/d5b7a27bad71957f41c644c3c19637f0d9fefabbbc4c501cf6be1eb0537c/gemmi-0.4.6-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,546   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/e8/506e69e5caaf93daf0e9429f2379a16ff07d39b76916944f492d7fe369a0/gemmi-0.4.6-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/21/cd910ccb94c96cc6608e109eead1645be18715b4699382aae51604464b71/gemmi-0.4.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/df/e72a1f1be72b6a3ff8f4def21ec8b31ac56c77bad1b871386fc8028115dd/gemmi-0.4.6-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/cd/c2fe5e0c0673c734db137d12d45ade2a16de88a68772926ddff4ce230ac6/gemmi-0.4.6-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/08/607d0949bb3e508feb63d71dcb16c8cc54b146d5d020e228b90db69f44c0/gemmi-0.4.6-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/cd/df5f9d994a9b20ea68cc6efb0892011d870db72ec985c77df6298f3ca836/gemmi-0.4.6-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,547   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/4a/6a4e5db1bdc3be1a1cb6c0c21193d981ea5fa2991058b4ceb7454a9cb520/gemmi-0.4.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,548   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/1b/306f7baf0785078f809c12c85652537545fc0f3320c914371ffc712f19e3/gemmi-0.4.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,548   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/d8/c37aa4a871b46ee81ffc34ffa612f917fe5ec1db64245cb4d050e5d0b827/gemmi-0.4.6-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,548   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ec/94/8d880d7694f846d9a480b504e4cc4f121055b001e6d2d9070102782bde74/gemmi-0.4.6-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,548   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/ef/2b5075478d09a0c9a688507124642f7e8a99d51d46c6a8dfffc9a9d9ff8a/gemmi-0.4.6-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,548   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/92/fcae326c99c89b286efcba8cd0c95e125f6ba909c2550ab23ad1e8377cc0/gemmi-0.4.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,549   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/8b/e39db36831a95644e89dea92bdd451ec6568b4e506ff9c2194cafd38d56f/gemmi-0.4.6-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,549   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/0a/d8cb7a05a6e3f199e0363e61e8cfc369820ea6adc84affc94a9363dec59f/gemmi-0.4.6-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,549   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/53/fa/89eabf0dbbaf91fbfc99bffcb3d603474bc6cd1ef9615e3f3213cd0cfe9d/gemmi-0.4.6-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,549   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/de/a01cc76fdb904af071b74b404daedeedb9fd215609f18e2104e9ec42cabb/gemmi-0.4.6-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,549   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/c0/22d5631bb9cf8af0c9a613987e4adaf670730c2af9878dcd49a8503aece8/gemmi-0.4.6-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,550   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/79/86/a7bd5d5c766a719319244373bf8e455bf85993e67230341de9be0b3631d8/gemmi-0.4.6-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,550   Found link https://files.pythonhosted.org/packages/ce/18/3fd50934956b378006bbd12cde768c35dd55c7f5359e82c8680100da07a4/gemmi-0.4.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.6
2022-12-23T04:01:43,550   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/86/cdff573b699036edc8ca9f7d83f3f40736ef17ea79726e1b2de7debcd72e/gemmi-0.4.7-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,550   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1c/6b/786e51debc4e0e199c67fb5a00972f02c6b0e01fdbf6ad19b726fba6a669/gemmi-0.4.7-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,551   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/51/99d207e130a212b2bccdc179a4e78a8ceaade11f5ee15c2f4ae3f6d4ecf2/gemmi-0.4.7-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,551   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cd/2fa705d106c5c08b541db9c65bb12f237930bc504995c04e055e8f8c2a50/gemmi-0.4.7-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,551   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/1d/85b0771c0235f82fef9df78050e5b22c8b92f89a587af1b4b6b5738fd94c/gemmi-0.4.7-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,551   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/05/20ac362a07e783d571cc65efaf1b3ee539ec28e73985da6a059252b620e3/gemmi-0.4.7-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,551   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/af/06d6cd6ce75983ccf4076846eaaf4a586964cfe121f3f767f7d7891f6bfe/gemmi-0.4.7-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/61/c8e2ec5bd6d1b6288aa541edc603f43f9248a83f9ca470383d739d7d7adf/gemmi-0.4.7-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/c5/83d1c9084eab480c13849462e0f211d74d2aaefd0832e33a42099e4dc7a4/gemmi-0.4.7-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/b9/f336e9522b8375f5e3ca8f02da39a1b3e5a62aa062ca63136c267a69f2ba/gemmi-0.4.7-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/54/4c0dd5642138b078b208fcd9600fc32e2d412b8945bc5b82fc74cbef20fe/gemmi-0.4.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/91/ba6367b2cdd3e7ae0400acecb3a8b9ec714a03850eec8023aa41f6124ff7/gemmi-0.4.7-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,552   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/62/5e843d8e0706d9a1afadad6d8154e837f885aeea77ce72b55a7d88fe5cb3/gemmi-0.4.7-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,553   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/ed/c10ad32ec19e1a81c3cf7a7d5b8e511253ed8afc6c304e03ac5fb2fe7457/gemmi-0.4.7-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,553   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/79/1156866fe02ba91633024c90fceb20daae7cacdd1f13a089d52dae1b9d75/gemmi-0.4.7-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,553   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/86/8d3c3302d1bfc07187fb2c049ff130c9e512c3039a806ed2dbd5e2975efa/gemmi-0.4.7-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,553   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4a/1f/df29f693708477accb02e7aa314f31838b2706ce7c8ddb42c95273760a88/gemmi-0.4.7-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,553   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/5d/45b02fecc8de9ea01860f3619954b8f97d702a25d21b59c782b2d0a081c0/gemmi-0.4.7-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,554   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/5a/d7ef0e8daa496d1e7297fade11e9ef751b525e5e6a26aeaa53fc23acf98f/gemmi-0.4.7-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,554   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/84/862810ac717e018ac4cb77860a565b40a6a072afae12e54c0c1fee2d846c/gemmi-0.4.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,554   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d0/27/60f1014c10675300a44b83b9d9b6da47cbed148c9420cd407b89aca042db/gemmi-0.4.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,554   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/67/e3/3544831741bf92df12d53c16c10257fea7d8a5752c9212e1d6acf1359e0d/gemmi-0.4.7-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,554   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d9/22/01d397b6c9298ceeabf12c25291afba0a04841a8ee847048136afed56f49/gemmi-0.4.7-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,555   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/94/f2/59a58c53ea47f850008b60b059eb3a181cc05fd3d6a0abafbdbe8ad0b093/gemmi-0.4.7-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,555   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/32/48/f29a0b98b00d7f3a3cf6b7b194f77eab3cbb83a630be8cbc4fdb2d23ff04/gemmi-0.4.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,555   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/9c/f6426743545f32e53190ca22d524819dff6b24ca98fc5c164da1db23f6db/gemmi-0.4.7-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,555   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ab/07/ea64580e7ed5ce8f2d1db56bf901e9d169d58d4dc52061d5453f6947b8ef/gemmi-0.4.7-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,555   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/7d/fc555f63e4842fe2411b7b5add1abb0dd0991f9c8b12a7adf98135531aa3/gemmi-0.4.7-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,556   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/b3/351231310fb90d16a1a443001a66be62ac3cc357f61c3c33e55ab55552e3/gemmi-0.4.7-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,556   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/59/87/54699b9751a3d1df8f0495ebf3d94de0c2c43a4890a4f00872e1217eb466/gemmi-0.4.7-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,556   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/df/ea/e01a008a71fdb8fe566ec35e322fc2b85067f5158156b54e676f33386b69/gemmi-0.4.7-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,556   Found link https://files.pythonhosted.org/packages/1a/6a/57ab433972758026e23b70317c45e6dd3d8d5e3b613395222cfc1c66f8e0/gemmi-0.4.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.7
2022-12-23T04:01:43,556   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/09/d16e2f83de54713c5be0b634de276a7c7f6e2edc4b68acdd8f55973d1fbc/gemmi-0.4.8-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,557   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bc/7b/a0f6d52641d618fca00d462d3ea38164a3d2abe6ced000f01b804975b31d/gemmi-0.4.8-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,557   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/bf/081a34019f66d66d4821f790ed3ce0f13f19ab1a1bad9c9867011848465f/gemmi-0.4.8-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,557   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/f5/3dc5d9b61ebbc6f491aadfdfd0bce5266173a6961cfaa8c222c39fa54474/gemmi-0.4.8-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,557   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/14/6a75536f7309e2b90fbebd8f71236725f69de274a2ab14be1aa087c7ef42/gemmi-0.4.8-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,557   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/44/ea1a52fee634b16022f8f9111d2906f5e34debc4c2ee42aa85d0e5699fe3/gemmi-0.4.8-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,558   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7f/3e/0bf25e2a04b65efa4a2201b28a20d7db1a8bb553651d29b8b4bfdc808bd7/gemmi-0.4.8-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,558   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/94/4b6a2f54607f925bee432c31bca7148912f73a76065349100b30f4e1b7a6/gemmi-0.4.8-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,558   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/e6/4dae5ab0096e2e7e2e1d6deda674752991a59bd0b40bac7d15750f201fae/gemmi-0.4.8-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,558   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/5d/b904133fddc14b69650969f26adf4475c61dd6afddde5915e8f9a1a908a4/gemmi-0.4.8-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,558   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c6/66/c5d99fd508028ac16185206845a30e077d6a50e696d70f4907763bf8604a/gemmi-0.4.8-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,559   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/15/9d/2625a39a3b865592dd6625e6ffb15a8f8db73b4b6e6fb4579a01180ac7a6/gemmi-0.4.8-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,559   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/38/67/04678d6d5c1e221db2d2c454ebd191f1e64426925ac78c74b776923cb17b/gemmi-0.4.8-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,559   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/2d/550fc0225d8ee08fd7bdfb0c9afb2d813aed43f7c425bba49f74a91f1432/gemmi-0.4.8-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,559   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/52/a8/1b28d920aadbde1846187d57f9c5ba330407251ebe3d7c309e1fdabcf406/gemmi-0.4.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,559   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/bd/ba247f570a39e762d764c0331543b3043cf64f5f0ca36bced858487987db/gemmi-0.4.8-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,560   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/0b/7967a09be146cdebee17333fc3a4dfd9f0e43f6f6ab41c84fa710d8ed96b/gemmi-0.4.8-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,560   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/bc/5f1924a4857563dcf10cea63b40033966f333866d5243d1c30fec71a18f0/gemmi-0.4.8-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,560   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/41/e4/a26be690bb45b77fee54288dd81f34e10bf30efe81ae6a516dbd15d6a4de/gemmi-0.4.8-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,560   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b2/25bea6fa2c21d0c27a397eb40f4818d34693be00926af93e5bbdc605660d/gemmi-0.4.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,560   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/69/ee81c98ac6998e29cf1931b341320a4d65f694c6a095adbff7821c085a11/gemmi-0.4.8-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,561   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/c5/eccf26a655b44740191e448ab62723e73d9d8101fb7cb61e9ae612f50772/gemmi-0.4.8-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,561   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/fb/02cddcbd54aaf2bf654984d03228e3ee2fbe3aedd632bc9d8627ef27cbcd/gemmi-0.4.8-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,561   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7d/68/d6aea40eabf9be195acb7d626ba502c74ee2dee946630e72239a9cad1a81/gemmi-0.4.8-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,561   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ff/15/2b20579d523b79117297458866daa67deed9bb3ad93ef94dce78d57c83ad/gemmi-0.4.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,561   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/97/34/5c0e1a3c55b929a6f001cc57407cefa673bda7202b449aab8b0d94de96a8/gemmi-0.4.8-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,562   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/34/367588c79586d6d659f1783bb7db682f15bfe2c4dfe14a418a763f972719/gemmi-0.4.8-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,562   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/3a/d3278fc9583de3e8cfb6db2692ee91fe9551046274e4c561ae9ee82af8ca/gemmi-0.4.8-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,562   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/30/53/9123f651bede3b9b5c3c926aef95e4f628f7b460f709230453bc16557df7/gemmi-0.4.8-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,562   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0a/8d/211a30f8c8f27b313e2d51e0374a642bda020689f5bbcfe3003d13601b76/gemmi-0.4.8-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,562   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/11/c7/de6f582a7878895741ede91da2d7e4f104c72404cbc5d7bf56b1ae8be6e8/gemmi-0.4.8-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,563   Found link https://files.pythonhosted.org/packages/be/6f/e45033469acdf0b06ae8451488de7619952e889cc4a7deed73e3c6df3cec/gemmi-0.4.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.8
2022-12-23T04:01:43,563   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/eb/d2/1c0f1fe6ae5eaca6f63b963e407f54424635e5e6d42874daedab3d65b59a/gemmi-0.4.9-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,563   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/6a/373e356e0f7e3929762e59684cec83a6ff4fa3ce5e15869ab8c1f80a0a58/gemmi-0.4.9-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,563   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0a/76/57de4029f8531bfb9bbf05aa861cb3350d68d7aa1a53ed24bffc475dff36/gemmi-0.4.9-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,563   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/f9/0e9d896fb871481d49c7f2d68e8b21cc6c5175fa158eda919ba85fc00d7a/gemmi-0.4.9-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,564   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/c1/e3a3dda52195d2256e18deaeba42d1ff8870cc2c856f912e3d92d5286419/gemmi-0.4.9-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,564   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/86/7497f5f70a47af921e946978c282d41f6d6e48aa7cba7d9e48a91665674f/gemmi-0.4.9-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,564   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/4b/12cda0c8a94cf6f5424ecb640e97e53bf3c9ed9bc714ecf6f5da73acf356/gemmi-0.4.9-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,564   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/83/04/718cb69a3fac9baf5f2d3d7ecf9f5bfd0ce241b0fa26af9299109ed8c410/gemmi-0.4.9-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,564   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/4e/c75b74e6e14d378611a40c04bc33f14a64d54cfe238abac87c519f6da989/gemmi-0.4.9-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,565   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/cc/9dcb68b95ba7e63f98b26caf95511a798cb2b9cf5baabf9588137ecb5d17/gemmi-0.4.9-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,565   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/69/dc/68794b8fd14366467c60faba4e10624eb1715c43aff5082938dd7b88ea79/gemmi-0.4.9-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,565   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/70/52c43c2a25e9394b8e21681b1914e2d31c2f5cb5b8c072dff1aaa9448b28/gemmi-0.4.9-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,565   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/dc/59a7a0c5c4f854f6e1adfce5699f1ebcfe6393632c218238a5a31fa0599f/gemmi-0.4.9-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,565   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cf/b3ac2fe6712a13eb3faa131256a79ac2d58a46add4912f09a029102fda67/gemmi-0.4.9-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,566   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/79/a9f847512b292ba6a2718a87ac54090d9af14b7bf54ac874ff100122dd8f/gemmi-0.4.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,566   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/23/46a9343185dd2760a81553627971daea3d2af7e5762585b2234f111cefd6/gemmi-0.4.9-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,566   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/e1/d92de9990dd38683f20dba5974b7abff16748fe7dafe93693c9579ab64a3/gemmi-0.4.9-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,566   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/e7/f29a3313d0f0ebb7cb7f30157f5e72360811dfe3967e54d908156155086a/gemmi-0.4.9-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,566   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/c8/52ad765f76e715a19ecd1b05d6b2f61e3022037343fdd21ac596f8b61ef0/gemmi-0.4.9-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,567   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/2e/8a73d84362328ea3326470970f038a015a4dfd239c7416f66bcd09e945b6/gemmi-0.4.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,567   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/40/38935fe474a830829060f76364b181cb3530cc4e55f70eb5e703c2f35792/gemmi-0.4.9-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,567   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c1/60/bf7c8d55f0e01150736289648b9317afc8aaaaa341d2df736b88250aac1f/gemmi-0.4.9-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,567   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/bd/bccc8fc52bcb02fed07fc82e1fc76470397705048a3c6464f769d20964d1/gemmi-0.4.9-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,567   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/f4/8b77aaff5a83c69d45aa84dbe95df55a1f881b67792c63ada24a1cc3b787/gemmi-0.4.9-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/c8/81912349292efd57f8b418615c5f3d5989939a700fc1824ee0381c55cad7/gemmi-0.4.9-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5f/09/b14a04e144961d07aa8d7794c2a74ca0a98ec3eef934cf5af385e7ea577f/gemmi-0.4.9-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/78/3d88e30416ea7e5281a388c548786e42cc34d0a3dbc5b6c3ae99c4e9584c/gemmi-0.4.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/70/24d2179a9a315ee7697b89434fe4704fa976bc5f8f35bd36ada7d3146554/gemmi-0.4.9-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6c/57/ae1e113330952b2dd3e16054607347065c39635d5b0eef42f82706c4573e/gemmi-0.4.9-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,568   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/e8/5f9736f5c9eb35d4e7e46863ae1178edc03ff57969c4ec2b410442bf588d/gemmi-0.4.9-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,569   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2d/a2/8fa1006b4b71ffb6127c284aa6a3ab434aeee124724333f338d6b8b63019/gemmi-0.4.9-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,569   Found link https://files.pythonhosted.org/packages/a3/07/40e5d0b8eeed379c2f0494b24d5777df3ad1df473e49f694688fe55d606c/gemmi-0.4.9.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.9
2022-12-23T04:01:43,569   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/7e/b1b2e2352137c9efb05b74829494b236cba98819d7b1eebecea2712cfa0b/gemmi-0.5.0-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,569   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/e9/ec01690a20730dcd1a058fcceede913ceaa418cf54ab33ac6ae581afccb0/gemmi-0.5.0-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,570   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/4b/e158002bc02949b84a5db4d34ee590e483ecbdf0933c91d44623fdf2d0bc/gemmi-0.5.0-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,570   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/2e/35ee66fe2b29f24d4ade466c65bcc05a329831cf2b2b0835c8e5f605c288/gemmi-0.5.0-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,570   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/b7/df0e4c0f360194eecc6497ccc9efbb77e16e86e30a80f05fb8c826961084/gemmi-0.5.0-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,570   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d3/5f/2a90f7feffa450e0c01107b789df325ad04d6d03e38c0170e4947247eac8/gemmi-0.5.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,570   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/cb/3095d21f6581cce5238ef7d22a952dd686b5cde4e5f0353b42f7d5722d6b/gemmi-0.5.0-cp310-cp310-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,571   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/9a/df01727dabeeec4325edd3c6e300394c351ef632dd924a1e57b95397ac5a/gemmi-0.5.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,571   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/ad/7711a08353106486f32bae4f04cdd61e9d074cd6f4041529d32ca8733947/gemmi-0.5.0-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,571   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/90/839af23d8b9ad3fc3c8082013d31940de27508350b274e405a716cbd6c36/gemmi-0.5.0-cp310-cp310-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,571   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/0f/6f8136965ed4b67f0b63ae86263f5012e4e5fb98c9d45ae6664c38e5934f/gemmi-0.5.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,571   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/3c/ff58df8fff8168a9a06e5f6ecd3f85e4047b8b4b1d53ae7f9b1f71d35b85/gemmi-0.5.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,572   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/1e/f77d398d0badef12f6717696b4781114fc8840413d03f5cd9ee6f867e212/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,572   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2a/1e/5519dac06aa9d7c30e6402b54a11621abe66b796f2050c5f26be003cf3a2/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,572   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/08/902a8302cd99b58450b9e7ab3f72c0f579bb6f142a491d2bb36792868e51/gemmi-0.5.0-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,572   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/2d/f75ed6b935336247702844ce20b8c542d5d1f11938f04675c822d536ca54/gemmi-0.5.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,572   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/a7/92cc0e9a3c0ca7cb74cf4a9842a6ee8e73f889474f759316d15468ad756b/gemmi-0.5.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/77/d6b339d7fb4d03b99cb7348548308df8aa2083c036892cf1cd0348adc008/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/de/de64b9614bc093414e201e41af48e62491033d02d54ca10518789f01bad9/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/ef/a8a518a29b43c417dfe8599b97ff8810a10f2ebb932cbc599d221ea05f34/gemmi-0.5.0-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/47/2c77c4f20424b8033cb19f9149b10f37248f6362bf6b8645470cd912ff9a/gemmi-0.5.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/6c/92cdf7e4a6e25d3e38fd9240de050dd0cd824732ae7b110286881767c7a2/gemmi-0.5.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,573   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/0d/d2fdbd7c6b9b84769358c7e88fe97f3cbde12b3b6f5c177fd36a5cefcea4/gemmi-0.5.0-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,574   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/40/ba626feff2b321db0b80b31312142f8dc0da8706ea65eba09eb92c69fb52/gemmi-0.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,574   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/58/2e3530707625e09caf89244deb9759afc44a775a2fff6ba3a7bef82ea476/gemmi-0.5.0-cp38-cp38-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,574   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8f/3d/2245c341a333ef8fa247e44237665150e6167f8ac2c63dd01f789bd72959/gemmi-0.5.0-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,574   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/89/33e00d7d352fad174b8767c4b9e8538fb6f33021689a36ee3928ee9924bd/gemmi-0.5.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,574   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/87/d7/7dc338573b4b8181c10df98be95cdbeb0b4e6a93079096623222dd6aa3a8/gemmi-0.5.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,575   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/1c/37636503b6acc4df72f7f2b8bb15941a44f129b0190a1f0abcdb561dda1a/gemmi-0.5.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,575   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/95/61916884f56af3cc500a8029a478e45eb05a716574c71656304bfd3455ee/gemmi-0.5.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,575   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/64/03d57b7c76535f4d2e79bf36c405ae25619264e9b1d7f673b0d204f13bd3/gemmi-0.5.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,575   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/04/4e7b48d479213ee6907e50c42b568c789ff991e11a69c628595f24908d91/gemmi-0.5.0-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,575   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/45/60bc4f0e73c1ed8c1071ccc74c3ae860b47d457ccdc9f930e0277482e3a6/gemmi-0.5.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,576   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/3c/66946187b011efb26cf735df9fcd1e6ae5a91cd4ddbe216beefc6be26172/gemmi-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,576   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/a4/44932652e4acd0c04debcdd7115d1c5a087fc8e7477cdbbbf4f1ee771e74/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,576   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/50/d2bd30b284932128864c0ba34e3a8cf0dc6d1c9b6dd44e081807a30927f3/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,576   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/be/8da12fbe007e468ef7125affeb15375ea602ab22eed9d5197278356ae884/gemmi-0.5.0-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,576   Found link https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.0
2022-12-23T04:01:43,577   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/5e/e7134f790fc3d419f478fa9ec5b234285878294745d74c2ba20807036cfc/gemmi-0.5.1-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,577   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/76/33/6a777f73f20ef9378ecbc89500246399e194c39e4cd3650159bcc747fb07/gemmi-0.5.1-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,577   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c1/48/6ceac36a3900c03fd574a1a4640a376416eb1b0f5ea4839c16df2c1e82cc/gemmi-0.5.1-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,577   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e8/4ebaa0e04865e4a3735025adc76eb0997235c0352e5e416be040c4fc1ab5/gemmi-0.5.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,577   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/e9/b3a2e6ba224e6cdc28bb65c4e651e8e8e5d06311694a0443489e78840553/gemmi-0.5.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,578   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/7a/33c34b0cd03c25f5739e634e0a0fdda976acc63e37328076de3816a6570b/gemmi-0.5.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,578   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/cf/9c36863fec54765cf8aebb899b078b2ef4a3786f777709f4246c682a78e8/gemmi-0.5.1-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,578   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/c9/6f2873961d70968de2c7454667356545b49729458986e2445babca52b666/gemmi-0.5.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,578   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/8a/5bee8dd8d5fa98a08788e90bc85f178697095ee874fd519f851371638ee3/gemmi-0.5.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,578   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/70/de03b41043537110b431c090827318d40e987d2d76d45cc2b26568069a17/gemmi-0.5.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,579   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/35/f7/16e3e6bf9f587f9f1e628779cb91d64c4fc87b7a1bc39c516ccd12d43bf6/gemmi-0.5.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,579   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/40/66/9253c3fc51382c7deb6a6d79789bce72eff84f664d7644c344dc8074a859/gemmi-0.5.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,579   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/67/26/f4b4f8ced10fbdc0ac99869c30d02bff92f06008eddb529e34592dec0b9f/gemmi-0.5.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,579   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/2c/e933240d7b3469de8584df7a2d696ecb32bf632a17fe14f64590c1c0181b/gemmi-0.5.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,579   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2a/49fcab403e40d161ef7d5e6b74e1c16d1377e93ff9f05a481ac2d93d5b9b/gemmi-0.5.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,580   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/37/6d/3abe1d11e3d5412b83bbe1e6227ed14a4e609a199b14d84c877154004130/gemmi-0.5.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,580   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/a4/e50ec4ffbbb1e2fd754f9e580b75572a452b6f2ef6b3b6a517c479c43739/gemmi-0.5.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,580   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/dc/ba2300387d633bffacac2f6c9c0a68669602a15efe30b6e35dc9599685ea/gemmi-0.5.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,580   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/78/dcabd5c547aa07eb130931089d810c21577ac7627a9b8f9a6cfc0a9db0f1/gemmi-0.5.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,580   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/da/6b9be38d955006a6dc09955cea0e6c3561b0dd3cab2d7102d25fb012d62a/gemmi-0.5.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,581   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b0/2b9efe6a849f9fe8ee450ba0f85b6298a68696c813dc33fe3a2cdf033aea/gemmi-0.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,581   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/5a/881dd10dda412b9f8c7610a2f588fb16c9f1ec22d88811f0bfd1a2bab0d5/gemmi-0.5.1-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,581   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/be/57ed099c9778f29bdfcb8496cb125d802cd8e1967fcbba3b2e029e06a900/gemmi-0.5.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,581   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/1a/68c0cf47ccb39d4215b2756a4c547b99bc009233e9def8b911dad19f7523/gemmi-0.5.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,581   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/8c/06f5b496a81040137b98886745477b7eee4edf4bd896d4123bb121fc1671/gemmi-0.5.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,582   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/cb/f2b6eed33269e437d6c1a6bb1398e1738f41b3e0ee4ff403e45d5e9f119a/gemmi-0.5.1-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,582   Found link https://files.pythonhosted.org/packages/57/65/5d3e560231481bf7c79a05d88230177e435eb4d1acdf59ccf42a716a0b02/gemmi-0.5.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.1
2022-12-23T04:01:43,582   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/a9/5f858b6487c4e5ab0622e6fdcdf0538c72bd50f825617150471754585acb/gemmi-0.5.2-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,582   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/40/d5af9e230a7ccea751437fc4b85317844e86113514e83b3f7e0393f03b40/gemmi-0.5.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,582   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/59/c560957e0664136774ffe09cca069b2b0040bd8fa24b9452d9ae1bb98102/gemmi-0.5.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,583   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/81/a7/be0bab8a6ffc965c5ffe54fa58185e1292549592cfe2d3b591a96b7259cc/gemmi-0.5.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,583   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/9d/bc42166366a086933cf70c4225c71ba8c138798a865c95a0ccecbc8c933f/gemmi-0.5.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,583   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/67/2344228e9a6de7cf2de55f186f97940411c21e5db626d4b0836511c986d1/gemmi-0.5.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,583   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/3b/979104e1d6612313a87d36ae1471d9283322c34b187360cf6ac323341c09/gemmi-0.5.2-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,583   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/26/fb7bb9d8046137561d4ee1e78f69efa922459fd0dbf4065547a2dace3675/gemmi-0.5.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,584   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d9/47/646295105e51c0022c0dc5adf2b3a6497f73e802bf741cc45b1ca5b45e65/gemmi-0.5.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,584   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/34/aa506ceccf8aad40def7f7de57e4a17384aff3ae311dca7e89a10ea9a8d1/gemmi-0.5.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,584   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/7a/6832c9ec110fa92d49c83b29a20a7c639bd20748a711b6743fa5cfd125dd/gemmi-0.5.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,584   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/15/dd9a5b7a3e7e98254ce1c991d759777c7e4e2b8b7d277e7ddbb280ed5745/gemmi-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,584   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/aa/527a757195dc72187c0ff83bf131dcf0038bf0c2e3a603a38d7fa4215527/gemmi-0.5.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,585   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/00/fa/9f13049567db238c9d54878057964a2bbbe6487eaa44e0dfe43f91499001/gemmi-0.5.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,585   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/5d/3b545003aa183963308071286e02eabc505dc916d6fd5345a9da1016cb1c/gemmi-0.5.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,585   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/aa/471b25c35d0766820ad2c2a910929082964d2d5cbc5b2792cffcbf2eb32f/gemmi-0.5.2-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,585   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/20/470fdeca31ccfda56451c19ecb2e620c16bc1070b2b9ec7d405f1fb01b27/gemmi-0.5.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,585   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/94/672d0881ddddebac8df9a459002b78bd0b7063f7354f05bbb72f86449d7e/gemmi-0.5.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/49/accc59e5cc1fe68d24b74fe6e861d050dc84bbda02fe1c1766401179c4b2/gemmi-0.5.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c2/26696dd217cde1c53004d6b43a94c2704c363ae16e390ea6c69bdd2239c0/gemmi-0.5.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/c5/6595cd65360e50de9ee0fe440fab1f2d0d00ded089a6fbe651fe6ae86344/gemmi-0.5.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/44/ee/a6d5ba33d69cc6fdb73effea27ff3e2ea9fd3bbe00e535902c24c098e349/gemmi-0.5.2-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/3e/1bb0e7f54832a84d703740394e4e88ee8a63807930bfe36dcd2e61e18b70/gemmi-0.5.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,586   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/bf/05d6199ebd6b4a78d89f7ab4679ac525ff245db1310b35fdceeed72268c5/gemmi-0.5.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,587   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/e3/46432303490b40a1db81cecac60777c45469bddf13af36e0364a8b73e98b/gemmi-0.5.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,587   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/e4/d8552659c51352812ed8eaea7c7036cd1d6816c4129521bba271342dad71/gemmi-0.5.2-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,587   Found link https://files.pythonhosted.org/packages/05/d2/7cbd2c8ed64f30098ca929426c4581947d3a307657ad383897c6d426c352/gemmi-0.5.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.2
2022-12-23T04:01:43,587   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/e4/aaf93cf945278e8eafe401c439a3fa0f9872fe1403adb3615cfd98b2eeff/gemmi-0.5.3-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,588   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/0b/8e99c7eb4b831b9fa748d4a1c51691017c4c74960c992f45a04093df0314/gemmi-0.5.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,588   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/b6/7e643460394a2463d6be493e111742e597dbcc9d1b85471e2cd2d7ceea77/gemmi-0.5.3-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,588   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/05/75c929884c6e1a3ea06e664261167ebd8ecab191439c2bfcfffb3018f3cb/gemmi-0.5.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,588   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/97/af6260feae87f042b55acaedd39c65c1fe63ce68d23d282888d91a6f066c/gemmi-0.5.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,588   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3e/63/bd2f2fa6fa6843537c4af7794e6d09bceb88461f3b6c03dea202c7cb5bc1/gemmi-0.5.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,589   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/ec/bb184260b935967bb7e05f02a369ce12bb1c5ceac1376da6b567f17e0d9f/gemmi-0.5.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,589   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/b3/5c8739dc4b97a085259caa681178227ba459f239653afb39a40b18e3f78d/gemmi-0.5.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,589   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/6a/15269ce5647809592e78d29ebe0e8cc35e637b57cdd51afd508642292ee1/gemmi-0.5.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,589   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/55/12a973e951b309941ffb88ea6310918613f9690e7958637b623d067915f4/gemmi-0.5.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,589   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/a9/ac222c95a7727c7779caa8befaa46c55d78f5f7fbe9c1bee699004c3f414/gemmi-0.5.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,590   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/58/f2d460de3646c007fc4037f3a35e22fc415aa0e58d8d1f43927a022fae1f/gemmi-0.5.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,590   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/64/05/a9daa5301eaaa48e7791db8d62cbc2a69181908ed3d6f3aec73019884097/gemmi-0.5.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,590   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ef/1d/07b0ff9f29974b8862afda122a573c9cde0d7a076179c8b6eb8e9fbc11fe/gemmi-0.5.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,590   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/7e/c78766eca9aa7ff1e0cfc5513b60c22d34d7791c215cc6c4cbea70c7a571/gemmi-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,590   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/d7/41e2e4f53d2391fd50fe5da1b0bf61cc2411dda9ad0113137753cd5498ee/gemmi-0.5.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/01/d09bdd5e6d0b40c3193eb628c048119a0778053a68836679d7f24000e7f1/gemmi-0.5.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5f/f1/01ea751ada8a3665c06c19f7a2c0b3902735ad44c329c1dd0bc2d54181ad/gemmi-0.5.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/0b/e7bdec1e4649cf3063c561781ce0c6952c3f088bdb903c6d6b2d4d114736/gemmi-0.5.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/86/3c/16781083dc69d625181527455f69d8e3fd953cff5ddbb12fca049cf284ba/gemmi-0.5.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/c8/cc9d7cb994b98cd594952fdd297897ded30d9626b7200322cd8bff2f72cd/gemmi-0.5.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,591   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/64/9581c9bdf168eb3e20271277d4f03c0f41ad32f9e4a660f5bb3052cb65e7/gemmi-0.5.3-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,592   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e0/752a99fc9677f351e1d491d8e91f5e20ddb4a3a16c584132d14051529149/gemmi-0.5.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,592   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/76/4f/57e247a7435cb18a1c07c9d5f0b47025ede0d54cef7e51ca1f7c9054aa44/gemmi-0.5.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,592   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/c0/27d20d226b9e1bf664d3fa5ed997ad6743dc4fe55551b8e44939c360e5f2/gemmi-0.5.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,592   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/3d/667bfc38478d2cef712c4e8069484fb240c7cbe02cb6c6a623e7b3dafd7b/gemmi-0.5.3-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,592   Found link https://files.pythonhosted.org/packages/da/a5/9b9db3e78655c1dbaf3b23c583e198887d7a1c24f8ebfcaf7b71bf09567b/gemmi-0.5.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.3
2022-12-23T04:01:43,593   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/16/9cdb5f325927d94675187cce48d3f9d70a69801a0f0c0b9b9a5812335932/gemmi-0.5.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,593   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/22/280fbec5a23dbcc5657925137f5dd0568b9d1f13b55c82db21c0689cc528/gemmi-0.5.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,593   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/d3/65f7ca88c42515502eca86a82322123f83b65fb925b7adcbc8ad4d00acd8/gemmi-0.5.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,593   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/b6/7f62137922cacb64cb7c3c65a6813183c9dbf18c56743ff04496856c9e59/gemmi-0.5.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/fc/630f4ddb5f5e9a68f8cca1457675d79eb6951dd8dcc1813ab788dc649654/gemmi-0.5.4-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7e/2c/edc7d68067cc769844907e2da36785a5e6ccdf642a4958001d0644b51cd3/gemmi-0.5.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/55/a4c35b0b4af64f09dbf804c829df1c823ca7ec88ca1749af6180ad99637c/gemmi-0.5.4-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/92/b8678a72f53b1c7fbbb06e1b5624d19ced139d9f19f93396b46d4650ccf1/gemmi-0.5.4-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/6e/0bcd81331a8b50c56414d97ffd917364c563777c443714667e39e7b02f83/gemmi-0.5.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,594   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/b6/f337087726e77a4e60be19c67c44cea3daed83ba53729bcec15ab8275b1c/gemmi-0.5.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,595   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/47/5a/570914192298919f5000ec857127d4f3128eaacbe336a12478002410be99/gemmi-0.5.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,595   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/40/9b2f5eb45200eed97427e0a3355f81e01cdcd020017fef5962e10b37a822/gemmi-0.5.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,595   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/63/be97c983f4d05eb9834c63bc2af12ff079c91ca9e5704deadf6185470ab4/gemmi-0.5.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,595   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/a5/9b9833335b38730e20103557d943896c983406df688e48b3b1d5756af918/gemmi-0.5.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,595   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/58/91/2b84026b4633850b732d24eb42ea90d205a665db0634f08d6f9729a975a2/gemmi-0.5.4-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,596   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/27/00586c50ea1c77d56f5b4bd32b3c8ca51761613bbdd4ab4828449321638c/gemmi-0.5.4-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,596   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/e4/27e116fbf2eea2606cc29d3e12f9bee397f36739a33e7cd673b0b60e55a9/gemmi-0.5.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,596   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/e7/e3b59e8f3832dc8368de486fa527b8653a9123c1646d72dde64bd483f2c6/gemmi-0.5.4-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,596   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/19/9135d06fdc0b4794326c0f020a658b053c9ceec94ecf272233e3de503129/gemmi-0.5.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,596   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/ff/8b5914f6ab4d7b3545a1099e5fc5f3f793cef92685e759efa487b6c4d068/gemmi-0.5.4-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,597   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/a5/88577ee7c9715f2f2f1e3fc81e892bffbb840598699063960957057a7995/gemmi-0.5.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,597   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/82/dcef0f4314e04d5f79575def71f8311811f6699e3c36fd79153892515fd8/gemmi-0.5.4-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,597   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/ef/9dbe8ef4d72224b1f768f15597bc7d63a92e45bf167e13c8ebf5c759c6e2/gemmi-0.5.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,597   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/d0/1a6f551b957e99b87b2a69c04142cc12484158ad9e97782f8c7f3cfe6347/gemmi-0.5.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,597   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/4f/c0814113c10a1bef981ccc9d58e68c21994cc05f9cc524b51c38066fd914/gemmi-0.5.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,598   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/52/561df927c23e6f12a3315946d41936240b3f1059bdacaf56c738c5c69bb3/gemmi-0.5.4-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,598   Found link https://files.pythonhosted.org/packages/f8/17/fd072a26394bbb01c9562b0090fc9282e5ca208364754b36cf30153b52e9/gemmi-0.5.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.4
2022-12-23T04:01:43,598   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/33/cf906ce011ccfca79c5704d4cf5691e5c2be9dffa46f159e2f792fd7f056/gemmi-0.5.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,598   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/9f/8d5439e37ad8337904a303d2d5a02027b1eacc6684449e0a19f9992d90b3/gemmi-0.5.5-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,598   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/d2/1531afc7535decb6b7bebbb74524ca3d4c716bb7f3a7570f0acc1a91cc34/gemmi-0.5.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,599   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/3a/a6ecf3270090f874239f38287a3eda4e7fdb071bb7e24774a23207b76c73/gemmi-0.5.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,599   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cf/83ca23cd819854187169b6a474a5c4df6e9334762c9021ec0303f7d51765/gemmi-0.5.5-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,599   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/26/7c5607f1b6231d1efd5607badd3bb4cf2d944444bd1b377420af5194c9a7/gemmi-0.5.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,599   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/88/c16708d525a708babfb5221aa8fd42905692fda86349f4374a102c80b57e/gemmi-0.5.5-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,599   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e9/95/cb33484a637c67e71cedd9be10d4dda406babf21f56497c5a1221e16d1f6/gemmi-0.5.5-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,600   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2f/a3/641e5b5fa5bd5a3cfcaea7ee3bda4b09c62c25bc9a4d9721f45b0959164f/gemmi-0.5.5-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,600   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/39/e809c957ba1fe10ff61af42f87b84c00f8cbaaa894db076763c9a1838fcf/gemmi-0.5.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,600   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/50/24ab02b6a771c88127e7c414e516aa71f76db1f04abd7c9491769c61e0ae/gemmi-0.5.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,600   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/9e/383f0ff461bfc73d4a00604d2a64c69443ce5e108f54eead7502d5935709/gemmi-0.5.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,600   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/c3/a2b34fdbac813054e446afc711368db28175a31a286fc297333dcef46bca/gemmi-0.5.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,601   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/83/bd/ed4ee26ea944e3415e72cb79dca5bbd3c3b7a03467dbccb355f1739b4e0c/gemmi-0.5.5-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,601   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/26/06944404ac8615dd3fb414c8c7600785f62764c72091fedd1181d0373393/gemmi-0.5.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,601   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/50/db3c022a134b7ff00b94fbfda112985fee3d030345ecd499d0aefad9f472/gemmi-0.5.5-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,601   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/64/715370a8abc99de51024107b1ea899d7cd15e0721331e61b61d950771767/gemmi-0.5.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,601   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/7e/000c77c1494a3b7b2b301b9234da30fec8ea78b5392617804cf3c4c1138b/gemmi-0.5.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,602   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/64/5955e1602cc634e8e125f41a726a029bb75a7f4164783c79a4f174e52064/gemmi-0.5.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,602   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/c0/78d31a28e549358964a3e1e2f289e0e1a228a123329efaccff0cc9df3362/gemmi-0.5.5-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,602   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/b6ffb1e4c451d0998f7a4723aea2423ff2f200098985ea8bcc0bca1a7e8b/gemmi-0.5.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,602   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cb/0bcde9adb9e6f2aca5a4c713da9472be061148f5f9f5f7429136f5d52572/gemmi-0.5.5-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,602   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/4a/61fa7c56fc1c9995a26f34ba33b7e784e5f29ec438f10436c389d34969d6/gemmi-0.5.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,603   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/64/5e4a17a96753ac6b446b2d845b5347402d3752a4a2c6a6911d48f2ee7341/gemmi-0.5.5-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,603   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/07/b239263539dc2aa2f7dd30755bf4cad735861a81d31fc62a08bf8b4405c7/gemmi-0.5.5-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,603   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/90/3c7646c751dc39b2a0d44a4800fd61cbdae17d0207b5edbbf2c91778f5e5/gemmi-0.5.5-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,603   Found link https://files.pythonhosted.org/packages/61/fd/6d97b18fb1875f92195eb0177d824a5778310a137fd39fa9c943ed8e5edf/gemmi-0.5.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.5
2022-12-23T04:01:43,603   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/26/b1/12d0e2fe36dc8e78277ddb3d1841e30c6abfccd9927bcf4d8f887e81b1af/gemmi-0.5.6-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,604   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/b3/508c9744a3e8318a27a2984d59cc86c1f7f61056ac39932a095bd6e298b7/gemmi-0.5.6-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,604   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/c6/fce3c6fd9664de4bed996186b9533433c1bc8d8c1d722be17ba4cd65b5d2/gemmi-0.5.6-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,604   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/45/806610e4fe9ff71818f491ff0699ee46abe44c17a73a5be5e1ba3f45fe72/gemmi-0.5.6-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,604   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5e/90/2d0f5a495510346f41105389611a9732e1f709de9e222a2341f63efcfc33/gemmi-0.5.6-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,604   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4a/4f/dd9cf3831a90318629ff6e9975f93bc98d8b25aa8c1be3cc362339596801/gemmi-0.5.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,605   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/46/dc/b7c19dd6604a45ec54d12cf560cfadcf135cd2fac5557cd7a67b181d9c7a/gemmi-0.5.6-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,605   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/19/a0/4cd0c72f67d1a44b5b6466a8abdcf2ee84d75d81a9e4b8c240c7c24b15e5/gemmi-0.5.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,605   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/63/ca5211bfb39c1934ed40b723be97dd7efed2e50a3f56b667720e306625f2/gemmi-0.5.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,605   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/99/c454fb9a6657d21f4de67c15bb48a5158bb28b707c1bd0c402fc25695718/gemmi-0.5.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,605   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/18/9dd0ca3ac0a13038edd29bb9859dad1b49e9f7bac582641a362ceb2fdaca/gemmi-0.5.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/01/394943328a4c6f484f66351902135e2108a3edfd8a836bee77d8527dedf6/gemmi-0.5.6-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/06/7a11f069d4e0e0de718e958b4dec13ff06b2e61b9ed636fb872b2874f750/gemmi-0.5.6-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/f4/02932d6055588ab3aa7a993bedcc49697f661804cba1fe84d5413be94044/gemmi-0.5.6-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/ef/f64bc4e49cb6ee6937aa3b0227465519eda3c256fa0534f427793fdfaddc/gemmi-0.5.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/6e/8c79ba89f1f40510864f001434183bbe249842254a774c2f44a4d39f624e/gemmi-0.5.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,606   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/27/7dc4a6f04a5c9ec681c000f2c5b21b63721585902e8bbacb4c1466d8e669/gemmi-0.5.6-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,607   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/06/487726cc18dadeed631a7938289f9a94caea1eddc5a836964094665e4aa5/gemmi-0.5.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,607   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/24/a40c11848aeaf65533a6949f7443eee8492fc8ac529526c15aec30c3a0c2/gemmi-0.5.6-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,607   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/12/288c6857358ddb6c4b9a71cc4b9b730ad52c3e8fbdd37b17a937879a7133/gemmi-0.5.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,607   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/55/fa99c74e8003f77bcf0575601231a35ec692e745b97e8e0635fe79535128/gemmi-0.5.6-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,607   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/74/ab723bc4e967a1bc60bf3a246ce1069c6215e5e6f20c45ea111bc2ea11e2/gemmi-0.5.6-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,608   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e2/037d85e2bc942e71df33b36e5551271853fdc5fe727fcc70e02405470b22/gemmi-0.5.6-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,608   Found link https://files.pythonhosted.org/packages/d8/b9/f34297a0a44be48553a7fee2c2cb3cdae9ba629b91755becd130fcd1a4d7/gemmi-0.5.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.6
2022-12-23T04:01:43,608   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/4d/15b3312e17b104ef2de349d509543a43a4f02f9f9fa24764651f3e715083/gemmi-0.5.7-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,608   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/aa/d5204b40f378e5c6ba1ba0c8cde26d17fb2f449998330bff40e77e108749/gemmi-0.5.7-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,609   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/61/bdf291633f75e932583c842ab93bdfe0c0fe71bafb578264c66a91fe9207/gemmi-0.5.7-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,609   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/eb/473841e07a0589795175c7a39c26bf8dbe9d9649aa4ac9f954e656fb5f43/gemmi-0.5.7-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,609   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/81/6d7c394103240c5483fab560c1833ca928ac4363b371aeda6ec8beb3c548/gemmi-0.5.7-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,609   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/2f/45ff904208c88487dd29b5b917ef89d497526d8807a46a1158353dbb8964/gemmi-0.5.7-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,609   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/fc/0e7b14dfa36821e5489c94f1007ef283681f9c08cbcd3a087cc0de2e1371/gemmi-0.5.7-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/2b/73c8d2e66c6efb52437e9b752b2364788fb041d443bc23dcee92ea01323c/gemmi-0.5.7-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e7/f7/699371413dde01c3775ddb9a9606c64d22e202f707a158b8b7999a5c36e9/gemmi-0.5.7-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/6b/b6aa72bd150c22cd5ed36c952f589bd6e135addc1a53908976fb2e27e961/gemmi-0.5.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c7/3e/6b22d8ba1ab0c423d5086dce986c31e54894890148bafac9cd6502928871/gemmi-0.5.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/4d/aa20493f2b338261c826c154ba3bfc73e884ced797c7b0e1b989159a1e96/gemmi-0.5.7-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,610   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8d/45/c0e0e60e1227554740011b312ccfb9660fe1289e491ba1140e056e56b0eb/gemmi-0.5.7-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,611   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/5a/145f04dc67fe9fd6e10cdcc65af696b34e41d628f135340aefa926cdc56e/gemmi-0.5.7-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,611   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/3f/175a88e4a4e13b6188f5294e6ee0d5d74ca2bac1b341223d75653bdb46ae/gemmi-0.5.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,611   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/4b/ec697a9dc25567987c188f007403de25cbcd7bebdf01d5d76f889101168d/gemmi-0.5.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,611   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/3e/d4a38d1df34cd653ebc3f969a87e83096c1cadee26b67aebb62efb197fa2/gemmi-0.5.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,611   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/fd/7a55214ae1697d99e1477d5ca3cf1193ee12ce43474dbf92314d5a0fe8ec/gemmi-0.5.7-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,612   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/d5/3a20c4cfaaae5918c3188c2078aeed251268abf46879af21632cea267dbf/gemmi-0.5.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,612   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/bf/6a8458470e18fadb53fe916f30de33c796b25d69b85c43a725792a8a7f56/gemmi-0.5.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,612   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/ad/7c9adbe2642836b0c115816e9ba841317f667f7aab2493c2a76a9435e2b0/gemmi-0.5.7-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,612   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/ff/9244d4f389985d2034e7a3c35020d832c794dc38d5fb7513cd681472ef5d/gemmi-0.5.7-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,612   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/40/80/c819325effcebc0e34d0f050707c0fabf7a302738752f62155d1c6d5dd43/gemmi-0.5.7-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,613   Found link https://files.pythonhosted.org/packages/f6/b7/183942691786c635166851be162c76b53c80323daa801d818718c6b0eec9/gemmi-0.5.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.7
2022-12-23T04:01:43,613   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/aa/34/1e4d8059a01ff7436a0c7a0d3ef48d15c672db1f529694c902536860cfbe/gemmi-0.5.8-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,613   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ec/7f/b5f95b84e021d30aab650bff0b84bba139bbe0d3633aeaab04a4e77689ca/gemmi-0.5.8-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,613   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/5d/6ef13a910a48b552ef3e84231071b9cfae5ca51944139104550ba28a2da2/gemmi-0.5.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,613   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/01/37/5bcae9ec39b50be8e7c297693449bceb55c8037c5d3011966b7ded490f2a/gemmi-0.5.8-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,614   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/74/5211db7e95dc56aeb0611722b138de707800fafbc05a10a0f0e7d55e4202/gemmi-0.5.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,614   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/68/f0dd6c85d62979dfed0a3e164524a9ee9ca62b955ef8c8fbf4ff3c8a490e/gemmi-0.5.8-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,614   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/5f/9802b68c37bd4d3b167d41a7f5667b99e2fa2e9d7f54994175b580acd0bf/gemmi-0.5.8-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,614   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/97/c3/a7d706f15cbedf68e63ec01fbd0ae94c3de00f0c07ef0cdf20281df20cae/gemmi-0.5.8-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,614   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5e/98/8e07bf4d4a6644c1ca4deca16766185de4dfeb40b66772e51bb57620ae8e/gemmi-0.5.8-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,615   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/b8/6413d0a26c118bb6e08991cdfc868555566a81c7f66448a5ba5adcb9664f/gemmi-0.5.8-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,615   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/c7/85d577c2f6184d3444e8cecd2dc21c953e1f8e04fd1c39c266391ed7766e/gemmi-0.5.8-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,615   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/20/e33d69e6e313ff0939cbc9e77af39db6c470cc15bf5bfebffc049679accb/gemmi-0.5.8-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,615   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6c/07/e2700cfbd04c5903652651dfb30688324c62f61fccc58bac09776cecb30f/gemmi-0.5.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,615   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/19/f4/4e9f828704c03448bd66d84eab814b4dd5ded83e0eb07d67f363fc5e4302/gemmi-0.5.8-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/9e/caa0fe5cb5fca449fe35c82533fd1bc0fdabab17c8a759ff4ed9c001c8eb/gemmi-0.5.8-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f6/aa/cbd00efe85fb1554bef6cc7b831692c7d66ef3b2dda319015721098f7744/gemmi-0.5.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/aa/0c3d6233091464d8cf46d45aaf12b5cd1479abe458f0947caaeb91b69fc9/gemmi-0.5.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/29/62/c65abc1ce7d8e38d84ff591b07a4e18b19910ed835375100bd375b099ba4/gemmi-0.5.8-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/29/22d9fe974ff14d61c69da5944f55161b2387c4f74a16d615a6d67a58c737/gemmi-0.5.8-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,616   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/08/c6/cd3fff2364296ca1871cf972b4d78ace2401da5debba5cbb1b9a878b20c7/gemmi-0.5.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,617   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/ac/19af429331388199ce2f2c8c334e9f58fabbd7dc4e68270f0a8a2042feb5/gemmi-0.5.8-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,617   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/80/6c8d142b76a6a2cbc5fb797070c47c778cd1fe65f0bd2a9d140233b78d6b/gemmi-0.5.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,617   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/40/fe/5146194f32779b457319a9b63e4bcdc07a5e0f76c3e92f6a8a963501509b/gemmi-0.5.8-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,617   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/85/b213cacd5e71ab28ae1229899773786f9e062fe2c0f563a794b3e69b28b0/gemmi-0.5.8-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,617   Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/06/64/52befb7f6fdb71090c1e892bf779c6e082f8780bb4fef1b80da6a428b1c8/gemmi-0.5.8-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/)
2022-12-23T04:01:43,618   Found link https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.8
2022-12-23T04:01:43,618 Fetching project page and analyzing links: https://www.piwheels.org/simple/gemmi/
2022-12-23T04:01:43,618 Getting page https://www.piwheels.org/simple/gemmi/
2022-12-23T04:01:43,619 Found index url https://www.piwheels.org/simple
2022-12-23T04:01:44,319 Fetched page https://www.piwheels.org/simple/gemmi/ as text/html
2022-12-23T04:01:44,379   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.8-cp37-cp37m-linux_armv7l.whl#sha256=cb1712edce1e77e72d89f944731f8921a14bcacd4beca9ea2cad730f395b64ed (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,380   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=cb1712edce1e77e72d89f944731f8921a14bcacd4beca9ea2cad730f395b64ed (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,380   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,381   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,381   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp37-cp37m-linux_armv7l.whl#sha256=7eb6942c6a99792aef64cd0ff72c80fc34933edcf90125fdee4ca2377d579a81 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,381   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp37-cp37m-linux_armv6l.whl#sha256=7eb6942c6a99792aef64cd0ff72c80fc34933edcf90125fdee4ca2377d579a81 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,382   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp39-cp39-linux_armv7l.whl#sha256=afda5bc299b811242039c9ddf9865fe0cf50d5147ad8dcdb467cfc6e2ef9e3b5 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,382   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp39-cp39-linux_armv6l.whl#sha256=afda5bc299b811242039c9ddf9865fe0cf50d5147ad8dcdb467cfc6e2ef9e3b5 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,383   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv7l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,383   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv6l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,383   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp39-cp39-linux_armv7l.whl#sha256=8009bd6c9ff05ba855d46259b0947b0f0b036af556d8f91f974c1a5a3c511f27 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,384   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp39-cp39-linux_armv6l.whl#sha256=8009bd6c9ff05ba855d46259b0947b0f0b036af556d8f91f974c1a5a3c511f27 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,384   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp37-cp37m-linux_armv7l.whl#sha256=7d5744c3c52e1d39f8a5ec841e7dd6993c2c710b9990d05a737c5fbf3554529b (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,385   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp37-cp37m-linux_armv6l.whl#sha256=7d5744c3c52e1d39f8a5ec841e7dd6993c2c710b9990d05a737c5fbf3554529b (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,385   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp35-cp35m-linux_armv7l.whl#sha256=9467b11948268fd9f578d982bba4cfa8cd2ba910997da7191fa7babbfe48775f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,385   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp35-cp35m-linux_armv6l.whl#sha256=9467b11948268fd9f578d982bba4cfa8cd2ba910997da7191fa7babbfe48775f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,386   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv7l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,386   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv6l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,386   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp37-cp37m-linux_armv7l.whl#sha256=27b200335951702bf05693af7a25b892d2704bd363bc95737a707a532b46c3ae (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,387   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp37-cp37m-linux_armv6l.whl#sha256=27b200335951702bf05693af7a25b892d2704bd363bc95737a707a532b46c3ae (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,387   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp35-cp35m-linux_armv7l.whl#sha256=f46e8a1c4f10da497acf531e385d07d5a1e7f6c1a76997c637a870fbd5cb1186 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,387   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp35-cp35m-linux_armv6l.whl#sha256=f46e8a1c4f10da497acf531e385d07d5a1e7f6c1a76997c637a870fbd5cb1186 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,388   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv7l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,388   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv6l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,389   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=3d8916944c98ec93f9bd59c9a383b4a1791583710d7476df8199f3ea86bbadb9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,389   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp37-cp37m-linux_armv6l.whl#sha256=3d8916944c98ec93f9bd59c9a383b4a1791583710d7476df8199f3ea86bbadb9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,389   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp35-cp35m-linux_armv7l.whl#sha256=42608213f8d38a4be9ba49609e10c980eefb7b6b1931a6f8f8b43772f5e7e408 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,390   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp35-cp35m-linux_armv6l.whl#sha256=42608213f8d38a4be9ba49609e10c980eefb7b6b1931a6f8f8b43772f5e7e408 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,390   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp39-cp39-linux_armv7l.whl#sha256=a916f9b8f3aa33b7aaf544ac67c897653368dc30ecc72943055e5fcadbdd8bac (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,391   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp39-cp39-linux_armv6l.whl#sha256=a916f9b8f3aa33b7aaf544ac67c897653368dc30ecc72943055e5fcadbdd8bac (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,391   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp37-cp37m-linux_armv7l.whl#sha256=052489f96e150b422dcff47059295f7a84a7fcfd4b952e18ad3b5f6e898a2e12 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,391   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp37-cp37m-linux_armv6l.whl#sha256=052489f96e150b422dcff47059295f7a84a7fcfd4b952e18ad3b5f6e898a2e12 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,392   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp35-cp35m-linux_armv7l.whl#sha256=6d1686cb8f3ae7494b27622f42808bf47a9fe6525ea9e9fc3cdd74071df0b367 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,392   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp35-cp35m-linux_armv6l.whl#sha256=6d1686cb8f3ae7494b27622f42808bf47a9fe6525ea9e9fc3cdd74071df0b367 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,392   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp39-cp39-linux_armv7l.whl#sha256=bd75da08aefacc09b12aa6af459b5bb72108130848a8fcaa74f6c6c4effb1568 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,393   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp39-cp39-linux_armv6l.whl#sha256=bd75da08aefacc09b12aa6af459b5bb72108130848a8fcaa74f6c6c4effb1568 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,393   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,394   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,394   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp35-cp35m-linux_armv7l.whl#sha256=b3c34bc9a9dd3f01dadf85b11a711c6f605d3cc9dbe55f93d07513a9a4200cb3 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,394   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp35-cp35m-linux_armv6l.whl#sha256=b3c34bc9a9dd3f01dadf85b11a711c6f605d3cc9dbe55f93d07513a9a4200cb3 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,395   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp39-cp39-linux_armv7l.whl#sha256=b87b079626f3ac98837abdd64cf589fd2d38c5c5c2eff8a04edba74493c76db9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,395   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp39-cp39-linux_armv6l.whl#sha256=b87b079626f3ac98837abdd64cf589fd2d38c5c5c2eff8a04edba74493c76db9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,395   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp37-cp37m-linux_armv7l.whl#sha256=7104c1d2c9213a52f1a0545dfecc585b5b6840942df62c54fdbd4a276a5b7636 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,396   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=7104c1d2c9213a52f1a0545dfecc585b5b6840942df62c54fdbd4a276a5b7636 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,396   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp35-cp35m-linux_armv7l.whl#sha256=495e32466beb8e1ae74c7f50d1f004945eabb979d5fdaf1f4a3ea000dcb96bf8 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,396   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp35-cp35m-linux_armv6l.whl#sha256=495e32466beb8e1ae74c7f50d1f004945eabb979d5fdaf1f4a3ea000dcb96bf8 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,397   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp39-cp39-linux_armv7l.whl#sha256=fd76139e419765029a4c1ccf388ddeb9cb6bd76c9f29e539e75520e9f0c47796 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,397   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp39-cp39-linux_armv6l.whl#sha256=fd76139e419765029a4c1ccf388ddeb9cb6bd76c9f29e539e75520e9f0c47796 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,398   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp37-cp37m-linux_armv7l.whl#sha256=d6f54f50c0058ae0f9233cd372b87396d3782f0aaddbab217635d0672aa4b262 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,398   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp37-cp37m-linux_armv6l.whl#sha256=d6f54f50c0058ae0f9233cd372b87396d3782f0aaddbab217635d0672aa4b262 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,398   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp35-cp35m-linux_armv7l.whl#sha256=535bae04fca6e24ea40c8521192837473e2acf105694933be7fd6d487858632c (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,399   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp35-cp35m-linux_armv6l.whl#sha256=535bae04fca6e24ea40c8521192837473e2acf105694933be7fd6d487858632c (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,399   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp39-cp39-linux_armv7l.whl#sha256=8cfb068becef1e8ce10a4cc8438544d203310a3a03519be5e1e89bde640015c1 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,399   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp39-cp39-linux_armv6l.whl#sha256=8cfb068becef1e8ce10a4cc8438544d203310a3a03519be5e1e89bde640015c1 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,400   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp37-cp37m-linux_armv7l.whl#sha256=969c981d811b123de397da46d72c3343995b102a311ac19bd74ef621148b4307 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,400   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp37-cp37m-linux_armv6l.whl#sha256=969c981d811b123de397da46d72c3343995b102a311ac19bd74ef621148b4307 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,400   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp35-cp35m-linux_armv7l.whl#sha256=e03cf06fbb6e76ee02b7aeadf4a35df8c381ea4fb93721c5ae76e655fc371dee (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,401   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.8-cp35-cp35m-linux_armv6l.whl#sha256=e03cf06fbb6e76ee02b7aeadf4a35df8c381ea4fb93721c5ae76e655fc371dee (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,401   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp39-cp39-linux_armv7l.whl#sha256=1d714c066088eb5213521e5096864257db64599979fc1064ebfbe7302199a2c6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,402   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp39-cp39-linux_armv6l.whl#sha256=1d714c066088eb5213521e5096864257db64599979fc1064ebfbe7302199a2c6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,402   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv7l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,402   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp37-cp37m-linux_armv6l.whl#sha256=581b43842fd2da1beebaa4df1a87066041fb5902883a519626d81ddc6fa2469a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,403   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp35-cp35m-linux_armv7l.whl#sha256=b53875d6708aaf3f3b6315fbe1e72ef76c4215760d09635673e9b6e5f54df3e5 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,403   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.7-cp35-cp35m-linux_armv6l.whl#sha256=b53875d6708aaf3f3b6315fbe1e72ef76c4215760d09635673e9b6e5f54df3e5 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,403   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv7l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,404   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv6l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,404   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv7l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,404   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp37-cp37m-linux_armv6l.whl#sha256=df534bcd0117e11f2e4a2f83c4a05ff2fa9d29d35f7525550808ebacd7f443bb (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,405   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv7l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,405   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp35-cp35m-linux_armv6l.whl#sha256=cd4a41dc4421d9c0691772d8f2168bb365e517ac7217cb052d6713bbccc5305e (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,406   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv7l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,406   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv6l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,406   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv7l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,407   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv6l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,407   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv7l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,407   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv6l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,408   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv7l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,408   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv6l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,408   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv7l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,409   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv6l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,409   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv7l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,410   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv6l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,410   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv7l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,410   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv6l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,411   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,411   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv6l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,411   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv7l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,412   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv6l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,412   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv7l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,412   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv6l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,413   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv7l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,413   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv6l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,414   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv7l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,414   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv6l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,414   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,415   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,415   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=0fa0e00dda8349e934da9b378af10d708d0f1474244d39b834fb6b5424ce357f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,415   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=0fa0e00dda8349e934da9b378af10d708d0f1474244d39b834fb6b5424ce357f (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,416   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv7l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,416   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv6l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,416   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv6l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,417   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv7l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,417   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv7l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,418   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv6l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,418   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,418   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,419   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv7l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,419   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv6l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,419   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,420   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,420   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,420   Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/)
2022-12-23T04:01:44,421 Skipping link: not a file: https://www.piwheels.org/simple/gemmi/
2022-12-23T04:01:44,421 Skipping link: not a file: https://pypi.org/simple/gemmi/
2022-12-23T04:01:44,455 Given no hashes to check 1 links for project 'gemmi': discarding no candidates
2022-12-23T04:01:44,527 Collecting gemmi==0.5.8
2022-12-23T04:01:44,529   Created temporary directory: /tmp/pip-unpack-eipbl6p1
2022-12-23T04:01:44,581   Downloading gemmi-0.5.8.tar.gz (719 kB)
2022-12-23T04:01:47,034   Added gemmi==0.5.8 from https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz to build tracker '/tmp/pip-build-tracker-hn8g2mn2'
2022-12-23T04:01:47,037   Running setup.py (path:/tmp/pip-wheel-nvm99dvn/gemmi_23f59b2865f04ad584bd9dc4a89fba35/setup.py) egg_info for package gemmi
2022-12-23T04:01:47,038   Created temporary directory: /tmp/pip-pip-egg-info-omf667do
2022-12-23T04:01:47,038   Preparing metadata (setup.py): started
2022-12-23T04:01:47,040   Running command python setup.py egg_info
2022-12-23T04:01:48,937   running egg_info
2022-12-23T04:01:48,939   creating /tmp/pip-pip-egg-info-omf667do/gemmi.egg-info
2022-12-23T04:01:48,979   writing /tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/PKG-INFO
2022-12-23T04:01:48,982   writing dependency_links to /tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/dependency_links.txt
2022-12-23T04:01:48,984   writing top-level names to /tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/top_level.txt
2022-12-23T04:01:48,985   writing manifest file '/tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/SOURCES.txt'
2022-12-23T04:01:49,107   reading manifest file '/tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/SOURCES.txt'
2022-12-23T04:01:49,110   reading manifest template 'MANIFEST.in'
2022-12-23T04:01:49,243   adding license file 'LICENSE.txt'
2022-12-23T04:01:49,258   writing manifest file '/tmp/pip-pip-egg-info-omf667do/gemmi.egg-info/SOURCES.txt'
2022-12-23T04:01:49,382   Preparing metadata (setup.py): finished with status 'done'
2022-12-23T04:01:49,388   Source in /tmp/pip-wheel-nvm99dvn/gemmi_23f59b2865f04ad584bd9dc4a89fba35 has version 0.5.8, which satisfies requirement gemmi==0.5.8 from https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz
2022-12-23T04:01:49,388   Removed gemmi==0.5.8 from https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz from build tracker '/tmp/pip-build-tracker-hn8g2mn2'
2022-12-23T04:01:49,393 Created temporary directory: /tmp/pip-unpack-88u9c1n4
2022-12-23T04:01:49,393 Building wheels for collected packages: gemmi
2022-12-23T04:01:49,398   Created temporary directory: /tmp/pip-wheel-9tqbr3f9
2022-12-23T04:01:49,398   Building wheel for gemmi (setup.py): started
2022-12-23T04:01:49,399   Destination directory: /tmp/pip-wheel-9tqbr3f9
2022-12-23T04:01:49,399   Running command python setup.py bdist_wheel
2022-12-23T04:01:50,798   running bdist_wheel
2022-12-23T04:01:50,985   running build
2022-12-23T04:01:50,985   running build_py
2022-12-23T04:01:51,013   creating build
2022-12-23T04:01:51,013   creating build/lib.linux-armv7l-cpython-39
2022-12-23T04:01:51,014   creating build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,015   copying examples/multiproc.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,016   copying examples/patterson_slice.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,018   copying examples/rama_gather.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,020   copying examples/hello.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,022   copying examples/merge_mtz_mmcif.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,023   copying examples/from_json.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,025   copying examples/aafreq.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,026   copying examples/col_order.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,028   copying examples/maskdiff.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,030   copying examples/maskcheck.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,031   copying examples/weight.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,033   copying examples/__init__.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,035   copying examples/ccd_subgraph.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,036   copying examples/map2mtz.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,038   copying examples/sub_ccd.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,040   copying examples/simple_search.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,041   copying examples/mtrix_iso.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,043   copying examples/cif_i_sigi.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,044   copying examples/ccd_gi.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,046   copying examples/long_geom.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,047   copying examples/matthews.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,050   copying examples/monomers.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,052   copying examples/mtz_i_sigi.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,053   copying examples/rama_plot.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,055   copying examples/__main__.py -> build/lib.linux-armv7l-cpython-39/gemmi-examples
2022-12-23T04:01:51,058   running build_clib
2022-12-23T04:01:51,091   building 'gemmi_zlib' library
2022-12-23T04:01:51,092   creating build/temp.linux-armv7l-cpython-39
2022-12-23T04:01:51,092   creating build/temp.linux-armv7l-cpython-39/third_party
2022-12-23T04:01:51,093   creating build/temp.linux-armv7l-cpython-39/third_party/zlib
2022-12-23T04:01:51,094   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/adler32.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/adler32.o
2022-12-23T04:01:51,518   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/crc32.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/crc32.o
2022-12-23T04:01:52,208   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzlib.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/gzlib.o
2022-12-23T04:01:52,703   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzread.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/gzread.o
2022-12-23T04:01:53,254   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inflate.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/inflate.o
2022-12-23T04:01:55,100   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inftrees.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/inftrees.o
2022-12-23T04:01:55,431   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inffast.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/inffast.o
2022-12-23T04:01:55,824   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/zutil.c -o build/temp.linux-armv7l-cpython-39/third_party/zlib/zutil.o
2022-12-23T04:01:56,017   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libgemmi_zlib.a build/temp.linux-armv7l-cpython-39/third_party/zlib/adler32.o build/temp.linux-armv7l-cpython-39/third_party/zlib/crc32.o build/temp.linux-armv7l-cpython-39/third_party/zlib/gzlib.o build/temp.linux-armv7l-cpython-39/third_party/zlib/gzread.o build/temp.linux-armv7l-cpython-39/third_party/zlib/inflate.o build/temp.linux-armv7l-cpython-39/third_party/zlib/inftrees.o build/temp.linux-armv7l-cpython-39/third_party/zlib/inffast.o build/temp.linux-armv7l-cpython-39/third_party/zlib/zutil.o
2022-12-23T04:01:56,049   running build_ext
2022-12-23T04:01:56,054   creating tmp
2022-12-23T04:01:56,055   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmprdolppfs.cpp -o tmp/tmprdolppfs.o -std=c++20
2022-12-23T04:01:56,147   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmphj7qso9y.cpp -o tmp/tmphj7qso9y.o -fvisibility=hidden
2022-12-23T04:01:56,253   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmpbvc0zel6.cpp -o tmp/tmpbvc0zel6.o -g0
2022-12-23T04:01:56,347   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c /tmp/tmp1i6y1ux1.cpp -o tmp/tmp1i6y1ux1.o -Wl,-s
2022-12-23T04:01:56,471   building 'gemmi' extension
2022-12-23T04:01:56,522   creating build/temp.linux-armv7l-cpython-39/python
2022-12-23T04:01:56,524   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/align.cpp -o build/temp.linux-armv7l-cpython-39/python/align.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:02:20,410   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:02:20,410                    from /usr/include/c++/10/functional:62,
2022-12-23T04:02:20,410                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:02:20,410                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:02:20,411                    from include/gemmi/model.hpp:8,
2022-12-23T04:02:20,411                    from include/gemmi/align.hpp:8,
2022-12-23T04:02:20,411                    from python/align.cpp:3:
2022-12-23T04:02:20,411   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator<gemmi::Position>]’:
2022-12-23T04:02:20,411   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Position>::iterator’ changed in GCC 7.1
2022-12-23T04:02:20,411     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:02:20,411         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:02:24,539   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:02:24,539                    from /usr/include/c++/10/functional:62,
2022-12-23T04:02:24,539                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:02:24,539                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:02:24,539                    from include/gemmi/model.hpp:8,
2022-12-23T04:02:24,540                    from include/gemmi/align.hpp:8,
2022-12-23T04:02:24,540                    from python/align.cpp:3:
2022-12-23T04:02:24,540   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::prepare_positions_for_superposition(std::vector<gemmi::Position>&, std::vector<gemmi::Position>&, gemmi::ConstResidueSpan, gemmi::ConstResidueSpan, gemmi::PolymerType, gemmi::SupSelect, char, std::vector<int>*)’:
2022-12-23T04:02:24,540   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:02:24,540    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:02:24,540         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:02:24,540   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:02:24,541    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:02:24,541         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:02:24,541   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:02:24,541    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:02:24,541         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:02:24,541   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:02:24,542    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:02:24,542         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:02:24,919   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:02:24,920                    from /usr/include/c++/10/functional:62,
2022-12-23T04:02:24,920                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:02:24,920                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:02:24,920                    from include/gemmi/model.hpp:8,
2022-12-23T04:02:24,920                    from include/gemmi/align.hpp:8,
2022-12-23T04:02:24,920                    from python/align.cpp:3:
2022-12-23T04:02:24,920   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::SupResult}; _Tp = gemmi::SupResult; _Alloc = std::allocator<gemmi::SupResult>]’:
2022-12-23T04:02:24,920   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SupResult>::iterator’ changed in GCC 7.1
2022-12-23T04:02:24,921     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:02:24,921         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:02:24,950   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::SupResult}; _Tp = gemmi::SupResult; _Alloc = std::allocator<gemmi::SupResult>]’:
2022-12-23T04:02:24,950   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SupResult*, std::vector<gemmi::SupResult> >’ changed in GCC 7.1
2022-12-23T04:02:24,950     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:02:24,950         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:02:33,979   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:02:33,979                    from /usr/include/c++/10/functional:62,
2022-12-23T04:02:33,979                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:02:33,979                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:02:33,980                    from include/gemmi/model.hpp:8,
2022-12-23T04:02:33,980                    from include/gemmi/align.hpp:8,
2022-12-23T04:02:33,980                    from python/align.cpp:3:
2022-12-23T04:02:33,980   /usr/include/c++/10/bits/stl_vector.h: In member function ‘bool pybind11::detail::list_caster<Type, Value>::load(pybind11::handle, bool) [with Type = std::vector<gemmi::Position>; Value = gemmi::Position]’:
2022-12-23T04:02:33,980   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:02:33,980    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:02:33,980         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:02:34,608   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:02:34,608                    from /usr/include/c++/10/functional:62,
2022-12-23T04:02:34,609                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:02:34,609                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:02:34,609                    from include/gemmi/model.hpp:8,
2022-12-23T04:02:34,609                    from include/gemmi/align.hpp:8,
2022-12-23T04:02:34,609                    from python/align.cpp:3:
2022-12-23T04:02:34,609   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:02:34,609   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:02:34,610     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:02:34,610         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:02:34,660   /usr/include/c++/10/bits/vector.tcc: In member function ‘bool pybind11::detail::list_caster<Type, Value>::load(pybind11::handle, bool) [with Type = std::vector<double>; Value = double]’:
2022-12-23T04:02:34,660   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:02:34,660     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:02:34,660         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:02:35,153   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/ccp4.cpp -o build/temp.linux-armv7l-cpython-39/python/ccp4.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:03:14,611   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/chemcomp.cpp -o build/temp.linux-armv7l-cpython-39/python/chemcomp.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:04:04,048   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:04,048                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:04,048                    from python/chemcomp.cpp:3:
2022-12-23T04:04:04,048   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:04:04,049   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:04:04,049     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:04,049         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:04,120   /usr/include/c++/10/bits/vector.tcc: In member function ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const string&)’:
2022-12-23T04:04:04,120   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:04,120     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:04,120         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:04,201   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:04:04,202   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:04:04,202     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:04,202         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:04,202   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:04:04,283   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:04:04,283   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:04:04,283   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:04:06,156   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:04:06,156   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:04:06,156   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:04:06,522   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:06,522                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:06,522                    from python/chemcomp.cpp:3:
2022-12-23T04:04:06,522   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::ChemComp::remove_nonmatching_restraints()’:
2022-12-23T04:04:06,522   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:06,522    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:06,523         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:06,523   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:06,523    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:06,523         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:06,524   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:06,524    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:06,525         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:07,038   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:07,038                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:07,038                    from python/chemcomp.cpp:3:
2022-12-23T04:04:07,038   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:04:07,038   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:04:07,039     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:07,039         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:07,141   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:04:07,142   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:04:07,280   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:04:07,280   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:04:09,839   /usr/include/c++/10/bits/vector.tcc: In function ‘gemmi::ChemComp gemmi::make_chemcomp_from_block(const gemmi::cif::Block&)’:
2022-12-23T04:04:09,839   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:09,839     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:09,840         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:09,840   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:09,840     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:09,840         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:09,840   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:09,840     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:09,840         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:10,809   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:04:10,809   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:04:10,809     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:10,809         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:10,909   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:04:10,909   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:10,909     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:10,909         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:10,911   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:10,911     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:04:10,911         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,002   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:04:11,003   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:04:11,003     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:11,003         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,110   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:04:11,110   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:04:11,110     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:11,110         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,227   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:04:11,227   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:11,227     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:11,227         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,229   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:11,230     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:04:11,230         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,325   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:04:11,326   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:04:11,326     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:11,326         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,437   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:04:11,437   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:04:11,437     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:11,438         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,577   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:04:11,577   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:11,577     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:11,577         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,579   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:11,580     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:04:11,580         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:11,720   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:04:11,721   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:04:11,721     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:11,721         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:12,214   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Plane&}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:04:12,214   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:04:12,214     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:04:12,215         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:12,289   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:04:12,289   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:12,289     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:12,290         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:12,291   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:12,291     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:04:12,291         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:12,370   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:04:12,371   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:04:12,371     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:12,371         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:12,371   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:04:12,438   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:04:12,438   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:04:12,439     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:04:12,439         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:19,894   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:19,894                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:19,895                    from python/chemcomp.cpp:3:
2022-12-23T04:04:19,895   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, pybind11::slice)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:19,895   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:19,895    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:19,895         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:20,041   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(const std::vector<gemmi::Restraints::Plane>&, pybind11::slice)>, std::vector<gemmi::Restraints::Plane>*, {const std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,042   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:20,042    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:20,042         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:20,162   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, const T&)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, const gemmi::Restraints::Plane&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,162   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:20,162    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:20,163         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:20,481   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, pybind11::slice)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,482   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:20,482    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:20,482         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:20,624   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(const std::vector<gemmi::Restraints::Torsion>&, pybind11::slice)>, std::vector<gemmi::Restraints::Torsion>*, {const std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,625   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:20,625    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:20,625         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:20,728   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, const T&)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, const gemmi::Restraints::Torsion&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,729   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:20,729    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:20,729         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:20,763   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, pybind11::slice)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,763   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:20,763    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:20,763         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:20,898   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(const std::vector<gemmi::Restraints::Angle>&, pybind11::slice)>, std::vector<gemmi::Restraints::Angle>*, {const std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:20,898   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:20,898    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:20,899         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:21,077   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, const T&)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, const gemmi::Restraints::Angle&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:21,077   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:21,077    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:21,078         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:21,115   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, pybind11::slice)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:21,116   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:21,116    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:21,116         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:21,256   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(const std::vector<gemmi::Restraints::Bond>&, pybind11::slice)>, std::vector<gemmi::Restraints::Bond>*, {const std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:21,256   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:21,256    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:21,256         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:21,363   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, const T&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, const gemmi::Restraints::Bond&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:21,363   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:21,363    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:04:21,364         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:04:21,886   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:21,886                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:21,886                    from python/chemcomp.cpp:3:
2022-12-23T04:04:21,886   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:21,887   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:21,887     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:21,887         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:21,887   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:21,887                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:21,887                    from python/chemcomp.cpp:3:
2022-12-23T04:04:21,887   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:21,887    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:21,888         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:22,095   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:22,096                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:22,096                    from python/chemcomp.cpp:3:
2022-12-23T04:04:22,096   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:22,096   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:22,096     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:22,097         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:22,690   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:22,690   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:22,691     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:22,691         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:22,691   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:22,691                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:22,691                    from python/chemcomp.cpp:3:
2022-12-23T04:04:22,691   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:22,691    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:22,692         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:22,858   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:22,858                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:22,858                    from python/chemcomp.cpp:3:
2022-12-23T04:04:22,858   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:22,858   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:22,859     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:22,859         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,019   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:23,019   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:23,019     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:23,019         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,020   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:23,020                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:23,020                    from python/chemcomp.cpp:3:
2022-12-23T04:04:23,020   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:23,020    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:23,020         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,191   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:23,192                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:23,192                    from python/chemcomp.cpp:3:
2022-12-23T04:04:23,192   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:23,192   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:23,192     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:23,192         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,357   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:23,357   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:23,357     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:23,358         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,358   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:23,358                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:23,358                    from python/chemcomp.cpp:3:
2022-12-23T04:04:23,358   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:23,358    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:04:23,358         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:23,514   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:04:23,514                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:23,515                    from python/chemcomp.cpp:3:
2022-12-23T04:04:23,515   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:23,515   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:23,515     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:04:23,515         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:33,830   In file included from python/common.h:3,
2022-12-23T04:04:33,830                    from python/chemcomp.cpp:6:
2022-12-23T04:04:33,830   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >, gemmi::Restraints::Bond&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’:
2022-12-23T04:04:33,830   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:33,830    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:04:33,830         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:33,831   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:33,831   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:33,888   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&)>, pybind11::iterator, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:33,888   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:33,889    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:04:33,889         |                                                                                           ^
2022-12-23T04:04:33,955   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >, gemmi::Restraints::Angle&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’:
2022-12-23T04:04:33,955   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:33,956    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:04:33,956         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:33,956   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:33,956   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:34,014   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&)>, pybind11::iterator, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:34,014   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:34,014    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:04:34,014         |                                                                                           ^
2022-12-23T04:04:34,081   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >, gemmi::Restraints::Torsion&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’:
2022-12-23T04:04:34,081   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:34,081    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:04:34,082         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:34,082   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:34,082   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:34,139   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&)>, pybind11::iterator, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:34,139   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:34,139    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:04:34,139         |                                                                                           ^
2022-12-23T04:04:34,330   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >, gemmi::Restraints::Plane&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’:
2022-12-23T04:04:34,330   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:34,330    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:04:34,330         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:34,331   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:34,331   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:34,388   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&)>, pybind11::iterator, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:34,388   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:34,388    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:04:34,388         |                                                                                           ^
2022-12-23T04:04:36,076   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:36,077                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:36,077                    from python/chemcomp.cpp:3:
2022-12-23T04:04:36,077   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, DiffType)>, gemmi::Restraints::Plane, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,077   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:36,077    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,077         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,133   In file included from python/chemcomp.cpp:8:
2022-12-23T04:04:36,133   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, DiffType, const T&)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, int, const gemmi::Restraints::Plane&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,134   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:36,134     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:04:36,134         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,261   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:36,262                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:36,262                    from python/chemcomp.cpp:3:
2022-12-23T04:04:36,262   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, DiffType)>, gemmi::Restraints::Torsion, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,262   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:36,262    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,262         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,304   In file included from python/chemcomp.cpp:8:
2022-12-23T04:04:36,304   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, DiffType, const T&)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, int, const gemmi::Restraints::Torsion&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,304   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:36,304     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:04:36,304         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,352   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:36,352                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:36,352                    from python/chemcomp.cpp:3:
2022-12-23T04:04:36,353   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, DiffType)>, gemmi::Restraints::Angle, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,353   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:36,353    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,353         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,402   In file included from python/chemcomp.cpp:8:
2022-12-23T04:04:36,402   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, DiffType, const T&)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, int, const gemmi::Restraints::Angle&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,402   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:36,402     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:04:36,402         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,444   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:36,444                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:36,445                    from python/chemcomp.cpp:3:
2022-12-23T04:04:36,445   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType)>, gemmi::Restraints::Bond, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,445   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:36,445    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,445         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,489   In file included from python/chemcomp.cpp:8:
2022-12-23T04:04:36,489   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType, const T&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int, const gemmi::Restraints::Bond&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,489   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::const_iterator’ changed in GCC 7.1
2022-12-23T04:04:36,489     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:04:36,489         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,632   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:04:36,632                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:36,632                    from python/chemcomp.cpp:3:
2022-12-23T04:04:36,632   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, DiffType)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,632   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:36,632    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,633         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,666   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, DiffType)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,666   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:36,666    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,666         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,734   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, DiffType)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,734   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:36,734    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,735         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:36,767   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, DiffType)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:36,767   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:36,767    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:04:36,767         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,799   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:04:37,799                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:04:37,800                    from python/chemcomp.cpp:3:
2022-12-23T04:04:37,800   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’:
2022-12-23T04:04:37,800   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:37,800      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:04:37,800         |         ^~~~~~~~~~~~~
2022-12-23T04:04:37,800   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:37,869   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Bond>, pybind11::class_<std::vector<gemmi::Restraints::Bond>, std::unique_ptr<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >, std::default_delete<std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> > > > > >::<lambda(std::vector<gemmi::Restraints::Bond>&, const std::vector<gemmi::Restraints::Bond>&)>, void, {std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&, const std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:37,870   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:37,870     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:37,870         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,870     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:37,870         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,870     149 |            && __assignable>::
2022-12-23T04:04:37,871         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,871     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:37,871         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,871   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:37,871     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:37,871         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,871     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:37,872         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,872     149 |            && __assignable>::
2022-12-23T04:04:37,872         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,872     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:37,872         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,976   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Restraints, std::vector<gemmi::Restraints::Bond>, {}>::<lambda(pybind11::class_<gemmi::Restraints>::type&, const std::vector<gemmi::Restraints::Bond>&)>, void, {gemmi::Restraints&, const std::vector<gemmi::Restraints::Bond, std::allocator<gemmi::Restraints::Bond> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:37,976   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:04:37,976     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:37,976         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,977     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:37,977         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,977     149 |            && __assignable>::
2022-12-23T04:04:37,977         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:37,977     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:37,977         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,084   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’:
2022-12-23T04:04:38,084   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:38,084      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:04:38,084         |         ^~~~~~~~~~~~~
2022-12-23T04:04:38,084   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:38,168   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Angle>, pybind11::class_<std::vector<gemmi::Restraints::Angle>, std::unique_ptr<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >, std::default_delete<std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> > > > > >::<lambda(std::vector<gemmi::Restraints::Angle>&, const std::vector<gemmi::Restraints::Angle>&)>, void, {std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&, const std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:38,168   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:38,169     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,169         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,169     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,169         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,169     149 |            && __assignable>::
2022-12-23T04:04:38,169         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,169     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,170         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,170   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:38,170     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,170         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,170     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,170         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,170     149 |            && __assignable>::
2022-12-23T04:04:38,170         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,171     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,171         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,278   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Restraints, std::vector<gemmi::Restraints::Angle>, {}>::<lambda(pybind11::class_<gemmi::Restraints>::type&, const std::vector<gemmi::Restraints::Angle>&)>, void, {gemmi::Restraints&, const std::vector<gemmi::Restraints::Angle, std::allocator<gemmi::Restraints::Angle> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:38,279   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:04:38,279     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,279         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,279     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,279         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,279     149 |            && __assignable>::
2022-12-23T04:04:38,279         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,280     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,280         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,407   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’:
2022-12-23T04:04:38,407   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:38,407      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:04:38,407         |         ^~~~~~~~~~~~~
2022-12-23T04:04:38,408   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:38,511   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Torsion>, pybind11::class_<std::vector<gemmi::Restraints::Torsion>, std::unique_ptr<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >, std::default_delete<std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> > > > > >::<lambda(std::vector<gemmi::Restraints::Torsion>&, const std::vector<gemmi::Restraints::Torsion>&)>, void, {std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&, const std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:38,511   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:38,511     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,511         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,511     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,512         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,512     149 |            && __assignable>::
2022-12-23T04:04:38,512         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,512     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,512         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,512   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:38,512     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,513         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,513     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,513         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,513     149 |            && __assignable>::
2022-12-23T04:04:38,513         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,513     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,513         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,607   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Restraints, std::vector<gemmi::Restraints::Torsion>, {}>::<lambda(pybind11::class_<gemmi::Restraints>::type&, const std::vector<gemmi::Restraints::Torsion>&)>, void, {gemmi::Restraints&, const std::vector<gemmi::Restraints::Torsion, std::allocator<gemmi::Restraints::Torsion> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:38,608   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:04:38,608     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:38,608         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,608     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:38,608         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,608     149 |            && __assignable>::
2022-12-23T04:04:38,608         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:38,609     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:38,609         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,025   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’:
2022-12-23T04:04:39,026   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:39,026      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:04:39,026         |         ^~~~~~~~~~~~~
2022-12-23T04:04:39,026   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:39,127   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Restraints::Plane>, pybind11::class_<std::vector<gemmi::Restraints::Plane>, std::unique_ptr<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >, std::default_delete<std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> > > > > >::<lambda(std::vector<gemmi::Restraints::Plane>&, const std::vector<gemmi::Restraints::Plane>&)>, void, {std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&, const std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:39,127   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:39,127     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:39,127         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,127     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:39,128         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,128     149 |            && __assignable>::
2022-12-23T04:04:39,128         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,128     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:39,128         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,128   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:39,128     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:39,129         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,129     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:39,129         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,129     149 |            && __assignable>::
2022-12-23T04:04:39,129         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,129     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:39,129         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,258   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Restraints, std::vector<gemmi::Restraints::Plane>, {}>::<lambda(pybind11::class_<gemmi::Restraints>::type&, const std::vector<gemmi::Restraints::Plane>&)>, void, {gemmi::Restraints&, const std::vector<gemmi::Restraints::Plane, std::allocator<gemmi::Restraints::Plane> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:04:39,258   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:04:39,258     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:04:39,258         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,259     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:04:39,259         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,259     149 |            && __assignable>::
2022-12-23T04:04:39,259         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:39,259     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:04:39,259         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:04:40,852   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/cif.cpp -o build/temp.linux-armv7l-cpython-39/python/cif.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:05:38,474   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/custom.cpp -o build/temp.linux-armv7l-cpython-39/python/custom.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:05:45,671   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/elem.cpp -o build/temp.linux-armv7l-cpython-39/python/elem.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:06:19,620   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/gemmi.cpp -o build/temp.linux-armv7l-cpython-39/python/gemmi.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:06:47,429   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/grid.cpp -o build/temp.linux-armv7l-cpython-39/python/grid.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:07:24,033   In file included from /usr/include/c++/10/bits/stl_algo.h:61,
2022-12-23T04:07:24,033                    from /usr/include/c++/10/string:52,
2022-12-23T04:07:24,033                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:07:24,033                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:07:24,033                    from /usr/include/c++/10/ios:42,
2022-12-23T04:07:24,034                    from /usr/include/c++/10/istream:38,
2022-12-23T04:07:24,034                    from /usr/include/c++/10/sstream:38,
2022-12-23T04:07:24,034                    from /usr/include/c++/10/complex:45,
2022-12-23T04:07:24,034                    from python/grid.cpp:3:
2022-12-23T04:07:24,034   /usr/include/c++/10/bits/stl_heap.h: In function ‘constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >; _Distance = int; _Tp = gemmi::Blob; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::find_blobs_by_flood_fill(const gemmi::Grid<float>&, const gemmi::BlobCriteria&, bool)::<lambda(const gemmi::Blob&, const gemmi::Blob&)> >]’:
2022-12-23T04:07:24,034   /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:24,034     223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
2022-12-23T04:07:24,035         |     ^~~~~~~~~~~~~
2022-12-23T04:07:28,279   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:07:28,279                    from /usr/include/c++/10/functional:62,
2022-12-23T04:07:28,279                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:07:28,280                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:07:28,280                    from include/gemmi/grid.hpp:11,
2022-12-23T04:07:28,280                    from python/grid.cpp:13:
2022-12-23T04:07:28,280   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Blob&}; _Tp = gemmi::Blob; _Alloc = std::allocator<gemmi::Blob>]’:
2022-12-23T04:07:28,280   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Blob>::iterator’ changed in GCC 7.1
2022-12-23T04:07:28,280     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:07:28,280         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:07:33,466   In file included from /usr/include/c++/10/string:52,
2022-12-23T04:07:33,466                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:07:33,466                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:07:33,466                    from /usr/include/c++/10/ios:42,
2022-12-23T04:07:33,467                    from /usr/include/c++/10/istream:38,
2022-12-23T04:07:33,467                    from /usr/include/c++/10/sstream:38,
2022-12-23T04:07:33,467                    from /usr/include/c++/10/complex:45,
2022-12-23T04:07:33,467                    from python/grid.cpp:3:
2022-12-23T04:07:33,467   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::find_blobs_by_flood_fill(const gemmi::Grid<float>&, const gemmi::BlobCriteria&, bool)::<lambda(const gemmi::Blob&, const gemmi::Blob&)> >]’:
2022-12-23T04:07:33,467   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:33,467    1945 |     __introsort_loop(_RandomAccessIterator __first,
2022-12-23T04:07:33,467         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:07:33,468   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:33,468   /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:33,468    1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
2022-12-23T04:07:33,468         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:07:59,346   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:07:59,346                    from /usr/include/c++/10/functional:62,
2022-12-23T04:07:59,346                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:07:59,346                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:07:59,347                    from include/gemmi/grid.hpp:11,
2022-12-23T04:07:59,347                    from python/grid.cpp:13:
2022-12-23T04:07:59,347   /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<gemmi::Blob> gemmi::find_blobs_by_flood_fill(const gemmi::Grid<float>&, const gemmi::BlobCriteria&, bool)’:
2022-12-23T04:07:59,347   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:59,347    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:07:59,347         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:07:59,348   In file included from /usr/include/c++/10/string:52,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/ios:42,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/istream:38,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/sstream:38,
2022-12-23T04:07:59,348                    from /usr/include/c++/10/complex:45,
2022-12-23T04:07:59,349                    from python/grid.cpp:3:
2022-12-23T04:07:59,349   /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Blob*, std::vector<gemmi::Blob> >’ changed in GCC 7.1
2022-12-23T04:07:59,349    1974 |    std::__introsort_loop(__first, __last,
2022-12-23T04:07:59,349         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-12-23T04:07:59,349    1975 |     std::__lg(__last - __first) * 2,
2022-12-23T04:07:59,349         |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:07:59,349    1976 |     __comp);
2022-12-23T04:07:59,350         |     ~~~~~~~
2022-12-23T04:08:02,519   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:08:02,520                    from /usr/include/c++/10/functional:62,
2022-12-23T04:08:02,520                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:08:02,520                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:08:02,520                    from include/gemmi/grid.hpp:11,
2022-12-23T04:08:02,520                    from python/grid.cpp:13:
2022-12-23T04:08:02,520   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator<gemmi::Position>]’:
2022-12-23T04:08:02,520   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Position>::iterator’ changed in GCC 7.1
2022-12-23T04:08:02,521     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:08:02,521         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:02,579   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:08:02,580                    from /usr/include/c++/10/functional:62,
2022-12-23T04:08:02,580                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:08:02,580                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:08:02,580                    from include/gemmi/grid.hpp:11,
2022-12-23T04:08:02,580                    from python/grid.cpp:13:
2022-12-23T04:08:02,580   /usr/include/c++/10/bits/stl_vector.h: In member function ‘bool pybind11::detail::list_caster<Type, Value>::load(pybind11::handle, bool) [with Type = std::vector<gemmi::Position>; Value = gemmi::Position]’:
2022-12-23T04:08:02,581   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Position*, std::vector<gemmi::Position> >’ changed in GCC 7.1
2022-12-23T04:08:02,581    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:08:02,581         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:08:03,525   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/hkl.cpp -o build/temp.linux-armv7l-cpython-39/python/hkl.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:08:13,046   python/hkl.cpp: In lambda function:
2022-12-23T04:08:13,047   python/hkl.cpp:143:18: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
2022-12-23T04:08:13,047     143 |           return r;
2022-12-23T04:08:13,047         |                  ^
2022-12-23T04:08:42,195   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:08:42,195                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:42,195                    from python/hkl.cpp:3:
2022-12-23T04:08:42,196   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
2022-12-23T04:08:42,196   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:08:42,196    1945 |     __introsort_loop(_RandomAccessIterator __first,
2022-12-23T04:08:42,196         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:08:42,196   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:08:42,196   /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:08:42,197    1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
2022-12-23T04:08:42,197         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:42,779   In file included from /usr/include/c++/10/bits/stl_algo.h:61,
2022-12-23T04:08:42,779                    from /usr/include/c++/10/vector:62,
2022-12-23T04:08:42,780                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:42,780                    from python/hkl.cpp:3:
2022-12-23T04:08:42,780   /usr/include/c++/10/bits/stl_heap.h: In function ‘constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >; _Distance = int; _Tp = gemmi::Intensities::Refl; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
2022-12-23T04:08:42,780   /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:42,780     223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
2022-12-23T04:08:42,780         |     ^~~~~~~~~~~~~
2022-12-23T04:08:42,845   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:08:42,845                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:42,845                    from python/hkl.cpp:3:
2022-12-23T04:08:42,845   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
2022-12-23T04:08:42,845   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:42,846    1839 |     __insertion_sort(_RandomAccessIterator __first,
2022-12-23T04:08:42,846         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:08:42,846   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:46,053   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
2022-12-23T04:08:46,054   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:46,054    1945 |     __introsort_loop(_RandomAccessIterator __first,
2022-12-23T04:08:46,054         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:08:46,054   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:46,056   /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:46,056    1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
2022-12-23T04:08:46,056         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,266   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:08:49,266                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:49,266                    from python/hkl.cpp:3:
2022-12-23T04:08:49,267   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator<gemmi::Intensities::Refl>]’:
2022-12-23T04:08:49,267   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Intensities::Refl>::iterator’ changed in GCC 7.1
2022-12-23T04:08:49,267     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:08:49,267         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,267   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Intensities::Refl>::iterator’ changed in GCC 7.1
2022-12-23T04:08:49,306   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:08:49,306                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:49,306                    from python/hkl.cpp:3:
2022-12-23T04:08:49,306   /usr/include/c++/10/bits/stl_algo.h: In member function ‘void gemmi::Intensities::merge_in_place(gemmi::DataType)’:
2022-12-23T04:08:49,306   /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:49,307    1974 |    std::__introsort_loop(__first, __last,
2022-12-23T04:08:49,307         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,307    1975 |     std::__lg(__last - __first) * 2,
2022-12-23T04:08:49,307         |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,307    1976 |     __comp);
2022-12-23T04:08:49,307         |     ~~~~~~~
2022-12-23T04:08:49,308   /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:49,308    1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
2022-12-23T04:08:49,308         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,308   /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:49,308    1891 |  std::__insertion_sort(__first, __last, __comp);
2022-12-23T04:08:49,308         |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,308   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:08:49,309                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:49,309                    from python/hkl.cpp:3:
2022-12-23T04:08:49,309   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:49,309    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:08:49,309         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,443   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:08:49,443                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:49,443                    from python/hkl.cpp:3:
2022-12-23T04:08:49,443   /usr/include/c++/10/bits/stl_algo.h: In member function ‘int gemmi::Binner::setup_from_1_d2(int, gemmi::Binner::Method, std::vector<double>&&, const gemmi::UnitCell*)’:
2022-12-23T04:08:49,443   /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:08:49,444    1974 |    std::__introsort_loop(__first, __last,
2022-12-23T04:08:49,444         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,444    1975 |     std::__lg(__last - __first) * 2,
2022-12-23T04:08:49,444         |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:49,444    1976 |     __comp);
2022-12-23T04:08:49,444         |     ~~~~~~~
2022-12-23T04:08:54,654   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:08:54,655                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:54,655                    from python/hkl.cpp:3:
2022-12-23T04:08:54,655   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::Intensities::remove_systematic_absences()’:
2022-12-23T04:08:54,655   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:54,655    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:08:54,655         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:55,468   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:08:55,468                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:08:55,468                    from python/hkl.cpp:3:
2022-12-23T04:08:55,468   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:08:55,468   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:08:55,469     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:08:55,469         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:55,546   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’:
2022-12-23T04:08:55,547   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:08:55,547     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:08:55,547         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:56,156   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:08:56,156   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:08:56,156     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:08:56,157         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:56,307   /usr/include/c++/10/bits/vector.tcc: In member function ‘gemmi::Mtz::Dataset& gemmi::Mtz::add_dataset(const string&)’:
2022-12-23T04:08:56,307   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:08:56,308     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:08:56,308         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:56,766   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Intensities::Refl}; _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator<gemmi::Intensities::Refl>]’:
2022-12-23T04:08:56,766   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Intensities::Refl>::iterator’ changed in GCC 7.1
2022-12-23T04:08:56,766     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:08:56,766         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:56,787   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Intensities::Refl}; _Tp = gemmi::Intensities::Refl; _Alloc = std::allocator<gemmi::Intensities::Refl>]’:
2022-12-23T04:08:56,787   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Intensities::Refl*, std::vector<gemmi::Intensities::Refl> >’ changed in GCC 7.1
2022-12-23T04:08:56,788     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:08:56,788         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:08:59,300   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator<gemmi::ReflnBlock>]’:
2022-12-23T04:08:59,300   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ReflnBlock>::iterator’ changed in GCC 7.1
2022-12-23T04:08:59,300     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:08:59,300         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:09:10,823   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_hkl(pybind11::module&)::<lambda(gemmi::cif::Document&)>, std::vector<gemmi::ReflnBlock>, {gemmi::cif::Document&}, {pybind11::name, pybind11::scope, pybind11::sibling}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:09:10,824   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2022-12-23T04:09:10,824     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:09:10,824         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:09:17,496   In file included from python/common.h:3,
2022-12-23T04:09:17,497                    from python/hkl.cpp:13:
2022-12-23T04:09:17,497   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >, gemmi::ReflnBlock&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >; ValueType = gemmi::ReflnBlock&; Extra = {}]’:
2022-12-23T04:09:17,497   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2022-12-23T04:09:17,497    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:09:17,497         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:09:17,497   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2022-12-23T04:09:17,498   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2022-12-23T04:09:17,565   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::ReflnBlock>, pybind11::class_<std::vector<gemmi::ReflnBlock>, std::unique_ptr<std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> >, std::default_delete<std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> > > > > >::<lambda(std::vector<gemmi::ReflnBlock>&)>, pybind11::iterator, {std::vector<gemmi::ReflnBlock, std::allocator<gemmi::ReflnBlock> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:09:17,566   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflnBlock*, std::vector<gemmi::ReflnBlock> >’ changed in GCC 7.1
2022-12-23T04:09:17,566    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:09:17,566         |                                                                                           ^
2022-12-23T04:09:26,432   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:09:26,433                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:09:26,433                    from python/hkl.cpp:3:
2022-12-23T04:09:26,433   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Correlation&}; _Tp = gemmi::Correlation; _Alloc = std::allocator<gemmi::Correlation>]’:
2022-12-23T04:09:26,433   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Correlation>::iterator’ changed in GCC 7.1
2022-12-23T04:09:26,433     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:09:26,433         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:09:26,434   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Correlation>::iterator’ changed in GCC 7.1
2022-12-23T04:09:26,495   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:09:26,495                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:09:26,496                    from python/hkl.cpp:3:
2022-12-23T04:09:26,496   /usr/include/c++/10/bits/stl_vector.h: In member function ‘bool pybind11::detail::list_caster<Type, Value>::load(pybind11::handle, bool) [with Type = std::vector<gemmi::Correlation>; Value = gemmi::Correlation]’:
2022-12-23T04:09:26,496   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Correlation*, std::vector<gemmi::Correlation> >’ changed in GCC 7.1
2022-12-23T04:09:26,496    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:09:26,496         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:09:29,399   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/meta.cpp -o build/temp.linux-armv7l-cpython-39/python/meta.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:10:24,555   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:24,555                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:24,555                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:24,556                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:24,556                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:24,556                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:24,556                    from python/common.h:3,
2022-12-23T04:10:24,556                    from python/meta.cpp:3:
2022-12-23T04:10:24,556   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::NcsOp&}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:10:24,556   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:10:24,557     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:24,557         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:24,611   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:10:24,611   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:24,612     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:24,612         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:24,612   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:24,613     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:10:24,613         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:24,665   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:10:24,665   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:10:24,665     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:24,665         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:24,666   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:10:24,704   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:10:24,704   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:10:24,704     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:24,704         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:25,033   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:10:25,034   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:10:25,034     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:25,034         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:25,157   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:10:25,157   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:25,157     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:25,157         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:25,158   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:25,159     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:10:25,159         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:25,228   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:10:25,228   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:10:25,228     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:25,229         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:25,229   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:10:25,301   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:10:25,302   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:10:25,302     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:25,302         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:26,285   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:10:26,285   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,285     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:26,286         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:26,286   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,347   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:10:26,347   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,347     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:26,348         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:26,641   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:10:26,641   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,641     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:26,642         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:26,642   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,734   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:10:26,734   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:10:26,735     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:26,735         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:33,997   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:33,998                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:33,998                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:33,998                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:33,998                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:33,998                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:33,998                    from python/common.h:3,
2022-12-23T04:10:33,999                    from python/meta.cpp:3:
2022-12-23T04:10:33,999   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, pybind11::slice)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:33,999   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:33,999    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:33,999         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:34,162   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, pybind11::slice)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:34,162   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:34,162    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:34,162         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:34,867   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, pybind11::slice)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:34,868   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:34,868    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:34,868         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:35,017   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(const std::vector<gemmi::Connection>&, pybind11::slice)>, std::vector<gemmi::Connection>*, {const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:35,017   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:35,017    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:35,017         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:10:35,140   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, const T&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, const gemmi::Connection&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:35,141   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:35,141    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:35,141         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:10:35,279   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, pybind11::slice)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:35,279   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:35,280    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:35,280         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:35,397   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(const std::vector<gemmi::NcsOp>&, pybind11::slice)>, std::vector<gemmi::NcsOp>*, {const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:35,397   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:35,397    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:35,397         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:10:35,491   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, const T&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, const gemmi::NcsOp&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:35,491   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:35,491    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:35,492         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:10:48,794   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:48,794                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:48,794                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:48,795                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:48,795                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:48,795                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:48,795                    from python/common.h:3,
2022-12-23T04:10:48,795                    from python/meta.cpp:3:
2022-12-23T04:10:48,795   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:10:48,795   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:10:48,796     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:48,796         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:48,850   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:48,851   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:48,851     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:48,851         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:48,957   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, const pybind11::iterable&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:48,957   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:48,957     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:48,957         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:48,957   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:48,958                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:48,958                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:48,958                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:48,958                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:48,958                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:48,958                    from python/common.h:3,
2022-12-23T04:10:48,958                    from python/meta.cpp:3:
2022-12-23T04:10:48,959   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:48,959    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:10:48,959         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:49,110   In file included from python/common.h:3,
2022-12-23T04:10:49,110                    from python/meta.cpp:3:
2022-12-23T04:10:49,111   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >, gemmi::NcsOp&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; ValueType = gemmi::NcsOp&; Extra = {}]’:
2022-12-23T04:10:49,111   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:49,111    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:10:49,111         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:49,111   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:49,111   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:49,165   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&)>, pybind11::iterator, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:49,166   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:49,166    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:10:49,166         |                                                                                           ^
2022-12-23T04:10:49,548   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:49,548                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:49,548                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:49,549                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:49,549                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:49,549                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:49,549                    from python/common.h:3,
2022-12-23T04:10:49,549                    from python/meta.cpp:3:
2022-12-23T04:10:49,549   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:10:49,549   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:10:49,550     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:49,550         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:49,809   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, const pybind11::iterable&)>’:
2022-12-23T04:10:49,810   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:49,810     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:49,810         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:49,810   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:49,810                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:49,810                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:49,810                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:49,811                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:49,811                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:49,811                    from python/common.h:3,
2022-12-23T04:10:49,811                    from python/meta.cpp:3:
2022-12-23T04:10:49,811   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:49,811    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:10:49,811         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:50,102   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:50,102                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:50,102                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:50,102                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:50,102                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:50,102                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:50,103                    from python/common.h:3,
2022-12-23T04:10:50,103                    from python/meta.cpp:3:
2022-12-23T04:10:50,103   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(const pybind11::iterable&)>’:
2022-12-23T04:10:50,103   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:50,103     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:50,103         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:50,318   In file included from python/common.h:3,
2022-12-23T04:10:50,319                    from python/meta.cpp:3:
2022-12-23T04:10:50,319   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >, gemmi::Connection&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >; ValueType = gemmi::Connection&; Extra = {}]’:
2022-12-23T04:10:50,319   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:50,319    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:10:50,319         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:50,320   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:50,320   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:50,373   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&)>, pybind11::iterator, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:50,374   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:50,374    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:10:50,374         |                                                                                           ^
2022-12-23T04:10:53,399   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:53,399                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:53,399                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:53,399                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:53,399                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:53,400                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:53,400                    from python/common.h:3,
2022-12-23T04:10:53,400                    from python/meta.cpp:3:
2022-12-23T04:10:53,400   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:10:53,400   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:10:53,400     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:53,400         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:53,473   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:53,473   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,473     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:53,473         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:53,603   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:53,603   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,603     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:10:53,603         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:53,604   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:53,604                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:53,605                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:53,605                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:53,605                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:53,605                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:53,605                    from python/common.h:3,
2022-12-23T04:10:53,605                    from python/meta.cpp:3:
2022-12-23T04:10:53,605   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,605    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:10:53,606         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:53,790   In file included from python/common.h:3,
2022-12-23T04:10:53,790                    from python/meta.cpp:3:
2022-12-23T04:10:53,791   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >, gemmi::Assembly::Operator&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’:
2022-12-23T04:10:53,791   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,791    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:10:53,791         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:53,791   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,792   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,847   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&)>, pybind11::iterator, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:53,847   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:53,847    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:10:53,847         |                                                                                           ^
2022-12-23T04:10:54,113   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:54,113                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:54,114                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:54,114                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:54,114                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:54,114                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:54,114                    from python/common.h:3,
2022-12-23T04:10:54,114                    from python/meta.cpp:3:
2022-12-23T04:10:54,114   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Assembly}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:10:54,114   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:10:54,115     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:54,115         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:54,223   In file included from python/common.h:3,
2022-12-23T04:10:54,223                    from python/meta.cpp:3:
2022-12-23T04:10:54,223   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >, gemmi::Assembly&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >; ValueType = gemmi::Assembly&; Extra = {}]’:
2022-12-23T04:10:54,223   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:54,223    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:10:54,223         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:54,224   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:54,224   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:54,279   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&)>, pybind11::iterator, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:54,280   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:54,280    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:10:54,280         |                                                                                           ^
2022-12-23T04:10:55,271   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:55,272                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:55,272                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:55,272                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:55,272                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:55,272                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:55,272                    from python/common.h:3,
2022-12-23T04:10:55,272                    from python/meta.cpp:3:
2022-12-23T04:10:55,273   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType)>, gemmi::Assembly, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:55,273   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:55,273    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:55,273         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:55,371   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, DiffType)>, gemmi::Assembly::Operator, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:55,371   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:55,371    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:55,371         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:55,595   /usr/include/c++/10/bits/stl_vector.h: In function ‘pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType)>, gemmi::Connection, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>’:
2022-12-23T04:10:55,595   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:55,595    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:55,595         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:55,640   In file included from python/meta.cpp:5:
2022-12-23T04:10:55,641   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType, const T&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int, const gemmi::Connection&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:55,641   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:55,641     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:10:55,641         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:55,765   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:55,766                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:55,766                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:55,766                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:55,766                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:55,766                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:55,766                    from python/common.h:3,
2022-12-23T04:10:55,766                    from python/meta.cpp:3:
2022-12-23T04:10:55,766   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType)>, gemmi::NcsOp, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:55,767   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:55,767    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:55,767         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:55,810   In file included from python/meta.cpp:5:
2022-12-23T04:10:55,810   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType, const T&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int, const gemmi::NcsOp&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:55,810   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:55,810     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:10:55,811         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:56,090   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:56,091                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:56,091                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:56,091                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:56,091                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:56,091                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:56,091                    from python/common.h:3,
2022-12-23T04:10:56,091                    from python/meta.cpp:3:
2022-12-23T04:10:56,092   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, DiffType)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:56,092   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:10:56,092    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:56,092         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:56,158   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, DiffType)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:56,158   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:10:56,158    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:56,158         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:56,189   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:56,190   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:10:56,190    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:56,190         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:56,221   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, DiffType)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:56,221   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:56,222    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:10:56,222         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:57,806   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:57,807                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:57,807                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:57,807                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:57,807                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:57,807                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:57,807                    from python/common.h:3,
2022-12-23T04:10:57,807                    from python/meta.cpp:3:
2022-12-23T04:10:57,807   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:10:57,808   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:10:57,808     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:10:57,808         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:57,872   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:57,873                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:57,873                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:57,873                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:57,873                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:57,873                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:57,873                    from python/common.h:3,
2022-12-23T04:10:57,873                    from python/meta.cpp:3:
2022-12-23T04:10:57,873   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, const T&)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, const gemmi::Assembly::Operator&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:57,873   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:57,874    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:57,874         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:10:57,930   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:10:57,930                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:57,930                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:57,930                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:57,930                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:57,930                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:57,931                    from python/common.h:3,
2022-12-23T04:10:57,931                    from python/meta.cpp:3:
2022-12-23T04:10:57,931   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:10:57,931   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:57,931     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:10:57,931         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:57,933   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:57,933     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:10:57,933         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:10:57,992   In file included from python/meta.cpp:5:
2022-12-23T04:10:57,992   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, DiffType, const T&)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, int, const gemmi::Assembly::Operator&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:57,992   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::const_iterator’ changed in GCC 7.1
2022-12-23T04:10:57,993     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:10:57,993         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:10:58,057   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:10:58,057                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:10:58,057                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:10:58,057                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:10:58,057                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:10:58,057                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:10:58,058                    from python/common.h:3,
2022-12-23T04:10:58,058                    from python/meta.cpp:3:
2022-12-23T04:10:58,058   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(const std::vector<gemmi::Assembly::Operator>&, pybind11::slice)>, std::vector<gemmi::Assembly::Operator>*, {const std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:10:58,058   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:10:58,058    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:10:58,058         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:11:00,926   In file included from /usr/include/c++/10/memory:66,
2022-12-23T04:11:00,926                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:246,
2022-12-23T04:11:00,926                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:00,926                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:00,927                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:00,927                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:00,927                    from python/common.h:3,
2022-12-23T04:11:00,927                    from python/meta.cpp:3:
2022-12-23T04:11:00,927   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’:
2022-12-23T04:11:00,927   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:11:00,927      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:11:00,927         |         ^~~~~~~~~~~~~
2022-12-23T04:11:00,928   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:11:00,998   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly::Operator>, pybind11::class_<std::vector<gemmi::Assembly::Operator>, std::unique_ptr<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >, std::default_delete<std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> > > > > >::<lambda(std::vector<gemmi::Assembly::Operator>&, const std::vector<gemmi::Assembly::Operator>&)>, void, {std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&, const std::vector<gemmi::Assembly::Operator, std::allocator<gemmi::Assembly::Operator> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:00,999   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:11:00,999     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:00,999         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:00,999     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:00,999         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:00,999     149 |            && __assignable>::
2022-12-23T04:11:01,000         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,000     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:01,000         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,000   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:11:01,000     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:01,000         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,000     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:01,001         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,001     149 |            && __assignable>::
2022-12-23T04:11:01,001         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,001     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:01,001         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,087   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:11:01,087   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:11:01,087     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:01,087         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,087     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:01,088         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,088     149 |            && __assignable>::
2022-12-23T04:11:01,088         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,088     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:01,088         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,819   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:11:01,819                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:01,819                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:01,819                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:01,819                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:01,820                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:01,820                    from python/common.h:3,
2022-12-23T04:11:01,820                    from python/meta.cpp:3:
2022-12-23T04:11:01,820   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Assembly&}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:11:01,820   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:11:01,820     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:11:01,820         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,890   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:11:01,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:01,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:01,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:01,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:01,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:01,890                    from python/common.h:3,
2022-12-23T04:11:01,891                    from python/meta.cpp:3:
2022-12-23T04:11:01,891   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, const T&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, const gemmi::Assembly&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:01,891   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:01,891    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:11:01,891         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:11:01,979   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:11:01,980                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:01,980                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:01,980                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:01,980                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:01,980                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:01,980                    from python/common.h:3,
2022-12-23T04:11:01,980                    from python/meta.cpp:3:
2022-12-23T04:11:01,981   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:11:01,981   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::const_iterator’ changed in GCC 7.1
2022-12-23T04:11:01,981     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:11:01,981         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:01,981   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:01,981     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:11:01,982         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,067   In file included from python/meta.cpp:5:
2022-12-23T04:11:02,067   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, DiffType, const T&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, int, const gemmi::Assembly&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,067   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::const_iterator’ changed in GCC 7.1
2022-12-23T04:11:02,068     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:11:02,068         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,120   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:11:02,120                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:02,120                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:02,121                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:02,121                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:02,121                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:02,121                    from python/common.h:3,
2022-12-23T04:11:02,121                    from python/meta.cpp:3:
2022-12-23T04:11:02,121   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,121   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:02,122     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:11:02,122         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,356   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:11:02,356                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:02,357                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:02,357                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:02,357                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:02,357                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:02,357                    from python/common.h:3,
2022-12-23T04:11:02,357                    from python/meta.cpp:3:
2022-12-23T04:11:02,357   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(const std::vector<gemmi::Assembly>&, pybind11::slice)>, std::vector<gemmi::Assembly>*, {const std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,357   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:02,358    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:11:02,358         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:11:02,535   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:11:02,535                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:02,535                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:02,535                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:02,536                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:02,536                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:02,536                    from python/common.h:3,
2022-12-23T04:11:02,536                    from python/meta.cpp:3:
2022-12-23T04:11:02,536   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, const pybind11::iterable&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,536   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:02,536     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:11:02,537         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,537   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:11:02,537                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:11:02,537                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:02,537                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:02,537                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:02,537                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:02,538                    from python/common.h:3,
2022-12-23T04:11:02,538                    from python/meta.cpp:3:
2022-12-23T04:11:02,538   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:02,538    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:11:02,538         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,727   In file included from /usr/include/c++/10/memory:66,
2022-12-23T04:11:02,728                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:246,
2022-12-23T04:11:02,728                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:11:02,728                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:11:02,728                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:11:02,728                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:11:02,728                    from python/common.h:3,
2022-12-23T04:11:02,728                    from python/meta.cpp:3:
2022-12-23T04:11:02,729   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’:
2022-12-23T04:11:02,729   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:11:02,729      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:11:02,729         |         ^~~~~~~~~~~~~
2022-12-23T04:11:02,729   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:11:02,759   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::constructor<Args>::execute<pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > >, {char [17]}, 0>::<lambda(pybind11::detail::value_and_holder&, const std::vector<gemmi::NcsOp>&)>, void, {pybind11::detail::value_and_holder&, const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor, char [17]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,759   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:11:02,759     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:02,760         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,760     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:02,760         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,760     149 |            && __assignable>::
2022-12-23T04:11:02,760         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,760     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:02,760         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,818   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::NcsOp>, pybind11::class_<std::vector<gemmi::NcsOp>, std::unique_ptr<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >, std::default_delete<std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> > > > > >::<lambda(std::vector<gemmi::NcsOp>&, const std::vector<gemmi::NcsOp>&)>, void, {std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&, const std::vector<gemmi::NcsOp, std::allocator<gemmi::NcsOp> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:02,818   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:11:02,818     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:02,818         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,818     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:02,818         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,819     149 |            && __assignable>::
2022-12-23T04:11:02,819         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,819     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:02,819         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,819   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:11:02,819     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:02,819         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,820     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:02,820         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,820     149 |            && __assignable>::
2022-12-23T04:11:02,820         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,820     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:02,820         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:02,934   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’:
2022-12-23T04:11:02,934   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:11:02,934      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:11:02,935         |         ^~~~~~~~~~~~~
2022-12-23T04:11:02,935   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:11:03,049   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::constructor<Args>::execute<pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > >, {char [17]}, 0>::<lambda(pybind11::detail::value_and_holder&, const std::vector<gemmi::Connection>&)>, void, {pybind11::detail::value_and_holder&, const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor, char [17]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:03,049   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:11:03,049     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:03,049         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,049     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:03,050         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,050     149 |            && __assignable>::
2022-12-23T04:11:03,050         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,050     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:03,050         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,110   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Connection>, pybind11::class_<std::vector<gemmi::Connection>, std::unique_ptr<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >, std::default_delete<std::vector<gemmi::Connection, std::allocator<gemmi::Connection> > > > > >::<lambda(std::vector<gemmi::Connection>&, const std::vector<gemmi::Connection>&)>, void, {std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&, const std::vector<gemmi::Connection, std::allocator<gemmi::Connection> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:03,110   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:11:03,110     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:03,111         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,111     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:03,111         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,111     149 |            && __assignable>::
2022-12-23T04:11:03,111         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,111     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:03,111         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,112   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:11:03,112     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:03,112         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,113     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:03,113         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,113     149 |            && __assignable>::
2022-12-23T04:11:03,113         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:03,113     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:03,113         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,119   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2022-12-23T04:11:04,119   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:04,119      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:11:04,120         |         ^~~~~~~~~~~~~
2022-12-23T04:11:04,120   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:04,215   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Assembly>, pybind11::class_<std::vector<gemmi::Assembly>, std::unique_ptr<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >, std::default_delete<std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> > > > > >::<lambda(std::vector<gemmi::Assembly>&, const std::vector<gemmi::Assembly>&)>, void, {std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&, const std::vector<gemmi::Assembly, std::allocator<gemmi::Assembly> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:11:04,215   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:04,215     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:04,215         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,216     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:04,216         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,216     149 |            && __assignable>::
2022-12-23T04:11:04,216         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,216     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:04,216         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,217   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:11:04,217     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:11:04,217         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,217     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:11:04,217         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,217     149 |            && __assignable>::
2022-12-23T04:11:04,218         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:04,218     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:11:04,218         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:11:05,651   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/mol.cpp -o build/temp.linux-armv7l-cpython-39/python/mol.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:12:10,299   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:10,299                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:10,299                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:10,299                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:10,300                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:10,300                    from python/mol.cpp:3:
2022-12-23T04:12:10,300   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:12:10,300   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:12:10,300     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:10,300         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:10,339   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:12:10,340   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:12:10,394   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector<gemmi::NcsOp>&)’:
2022-12-23T04:12:10,394   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:12:10,394     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:12:10,394         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:10,394   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:12:10,395     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:12:10,395         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:10,446   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:12:10,446   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:12:10,446     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:10,446         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:10,997   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:12:10,997   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:10,997     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:12:10,997         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,030   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:12:11,030                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:11,030                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:11,030                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:11,030                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:11,030                    from python/mol.cpp:3:
2022-12-23T04:12:11,031   /usr/include/c++/10/bits/stl_vector.h: In function ‘void remove_child(P&, int) [with P = gemmi::Residue]’:
2022-12-23T04:12:11,031   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:11,031    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:12:11,031         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,064   /usr/include/c++/10/bits/stl_vector.h: In function ‘bool gemmi::replace_deuterium_with_fraction(gemmi::Residue&)’:
2022-12-23T04:12:11,064   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:11,065    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:12:11,065         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,180   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::remove_alternative_conformations(T&) [with T = gemmi::Chain]’:
2022-12-23T04:12:11,180   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:11,180    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:12:11,180         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,314   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:11,314                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:11,314                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:11,314                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:11,314                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:11,315                    from python/mol.cpp:3:
2022-12-23T04:12:11,315   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = gemmi::Atom; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:12:11,315   /usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:11,315     395 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:11,315         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,401   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:12:11,402   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:11,402     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:11,402         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,402   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:11,524   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::expand_hd_mixture(gemmi::Structure&)’:
2022-12-23T04:12:11,524   /usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type ‘const __gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:11,524     154 |      _M_insert_aux(__pos, std::move(__x_copy._M_val()));
2022-12-23T04:12:11,524         |      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:11,524   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:11,525     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:12:11,525         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:12,017   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator<gemmi::Fractional>]’:
2022-12-23T04:12:12,018   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Fractional>::iterator’ changed in GCC 7.1
2022-12-23T04:12:12,018     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:12,018         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:12,135   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:12:12,138                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:12,138                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:12,139                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:12,139                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:12,139                    from python/mol.cpp:3:
2022-12-23T04:12:12,139   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’:
2022-12-23T04:12:12,139   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Fractional*, std::vector<gemmi::Fractional> >’ changed in GCC 7.1
2022-12-23T04:12:12,139    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:12:12,139         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:12:12,807   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:12,807                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:12,807                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:12,807                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:12,807                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:12,807                    from python/mol.cpp:3:
2022-12-23T04:12:12,807   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:12:12,808   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:12:12,808     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:12,808         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:15,755   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:12:15,755   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:12:15,784   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:12:15,784   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:12:15,784     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:12:15,784         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:15,879   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:12:15,880                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:15,880                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:15,880                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:15,880                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:15,880                    from python/mol.cpp:3:
2022-12-23T04:12:15,880   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::set_bounding_cell(const gemmi::UnitCell&)’:
2022-12-23T04:12:15,880   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:12:15,881    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:12:15,881         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:12:19,759   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:19,759                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:19,759                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:19,759                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:19,759                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:19,760                    from python/mol.cpp:3:
2022-12-23T04:12:19,760   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:12:19,760   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:19,760     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:12:19,760         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:19,760   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:19,760   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:19,798   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:12:19,799                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:19,799                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:19,799                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:19,799                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:19,799                    from python/mol.cpp:3:
2022-12-23T04:12:19,799   /usr/include/c++/10/bits/stl_vector.h: In function ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’:
2022-12-23T04:12:19,800   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:19,800    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:12:19,800         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:19,800   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:19,800    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:12:19,801         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:19,869   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::vector_remove_if(std::vector<T>&, F&&) [with T = gemmi::Atom; F = gemmi::trim_to_alanine(gemmi::Residue&)::<lambda(const gemmi::Atom&)>]’:
2022-12-23T04:12:19,869   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:19,870    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:12:19,870         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:20,072   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::vector_remove_if(std::vector<T>&, F&&) [with T = gemmi::Atom; F = gemmi::remove_hydrogens<gemmi::Residue>::<lambda(const gemmi::Atom&)>]’:
2022-12-23T04:12:20,072   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:20,072    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:12:20,072         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:20,462   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Model]’:
2022-12-23T04:12:20,462   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:20,462    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:12:20,462         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:20,894   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::Selection::remove_selected(T&) const [with T = gemmi::Model]’:
2022-12-23T04:12:20,895   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:20,895    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:12:20,895         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:22,157   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:22,158                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:22,158                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:22,158                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:22,158                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:22,158                    from python/mol.cpp:3:
2022-12-23T04:12:22,158   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Selection::AtomInequality}; _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator<gemmi::Selection::AtomInequality>]’:
2022-12-23T04:12:22,158   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Selection::AtomInequality>::iterator’ changed in GCC 7.1
2022-12-23T04:12:22,159     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:22,159         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:23,510   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:12:23,511                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:23,511                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:23,511                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:23,511                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:23,511                    from python/mol.cpp:3:
2022-12-23T04:12:23,511   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::expand_ncs(gemmi::Structure&, gemmi::HowToNameCopiedChain)’:
2022-12-23T04:12:23,511   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:12:23,512    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:12:23,512         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:12:27,187   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:27,187                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:27,187                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:27,188                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:27,188                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:27,188                    from python/mol.cpp:3:
2022-12-23T04:12:27,188   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::impl::parse_cid(const string&, gemmi::Selection&)’:
2022-12-23T04:12:27,188   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Selection::AtomInequality*, std::vector<gemmi::Selection::AtomInequality> >’ changed in GCC 7.1
2022-12-23T04:12:27,188     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:12:27,188         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:28,265   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:12:28,266                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:28,266                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:28,266                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:28,266                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:28,266                    from python/mol.cpp:3:
2022-12-23T04:12:28,266   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’:
2022-12-23T04:12:28,266   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:12:28,267      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:12:28,267         |         ^~~~~~~~~~~~~
2022-12-23T04:12:28,267   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:12:28,424   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:12:28,425   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:12:28,425     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:12:28,425         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:28,425     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:12:28,425         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:28,425     149 |            && __assignable>::
2022-12-23T04:12:28,425         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:28,426     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:12:28,426         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:47,976   In file included from python/common.h:3,
2022-12-23T04:12:47,976                    from python/mol.cpp:11:
2022-12-23T04:12:47,976   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >; Sentinel = gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’:
2022-12-23T04:12:47,977   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:47,977    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:12:47,977         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:12:47,977   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:47,977   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,051   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::FilterProxy<gemmi::Selection, gemmi::Atom>; Extra = {}]’:
2022-12-23T04:12:48,051   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,051    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:12:48,051         |                                                                                           ^
2022-12-23T04:12:48,051   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::FilterIterPolicy<gemmi::Selection, std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,577   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >, const gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >; Sentinel = __gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >; ValueType = const gemmi::Atom&; Extra = {}]’:
2022-12-23T04:12:48,577   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,577    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:12:48,578         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:12:48,578   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,578   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,639   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(const gemmi::Residue&)>, pybind11::iterator, {const gemmi::Residue&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:12:48,639   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:48,640    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:12:48,640         |                                                                                           ^
2022-12-23T04:12:49,104   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >; Sentinel = gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’:
2022-12-23T04:12:49,104   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,104    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:12:49,104         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:12:49,104   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,105   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,105   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,169   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(gemmi::UniqProxy<gemmi::Atom>&)>, pybind11::iterator, {gemmi::UniqProxy<gemmi::Atom, std::vector<gemmi::Atom, std::allocator<gemmi::Atom> > >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:12:49,169   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,169    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:12:49,170         |                                                                                           ^
2022-12-23T04:12:49,170   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:49,170   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘gemmi::BidirIterator<gemmi::UniqIterPolicy<std::vector<gemmi::Atom>, gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:57,572   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:12:57,572                    from /usr/include/c++/10/functional:62,
2022-12-23T04:12:57,572                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:12:57,572                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:12:57,572                    from include/gemmi/model.hpp:8,
2022-12-23T04:12:57,572                    from python/mol.cpp:3:
2022-12-23T04:12:57,573   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:12:57,573   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:12:57,573     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:12:57,573         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:57,662   /usr/include/c++/10/bits/vector.tcc: In function ‘C& add_child(P&, C, int) [with P = gemmi::Residue; C = gemmi::Atom]’:
2022-12-23T04:12:57,662   /usr/include/c++/10/bits/vector.tcc:354:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:57,662     354 |    _M_insert_aux(begin() + __n, std::move(__v));
2022-12-23T04:12:57,662         |    ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:57,663   /usr/include/c++/10/bits/vector.tcc:356:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:57,663     356 |  _M_realloc_insert(begin() + __n, std::move(__v));
2022-12-23T04:12:57,663         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:12:57,743   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Chain]’:
2022-12-23T04:12:57,743   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:12:57,743     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:12:57,743         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,617   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:13:00,617                    from /usr/include/c++/10/functional:62,
2022-12-23T04:13:00,617                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:13:00,617                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:13:00,618                    from include/gemmi/model.hpp:8,
2022-12-23T04:13:00,618                    from python/mol.cpp:3:
2022-12-23T04:13:00,618   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2022-12-23T04:13:00,618   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:13:00,618      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:13:00,618         |         ^~~~~~~~~~~~~
2022-12-23T04:13:00,618   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:13:00,724   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:13:00,725   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:13:00,725     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:00,725         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,725     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:00,725         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,725     149 |            && __assignable>::
2022-12-23T04:13:00,725         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,725     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:00,726         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,818   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static void* pybind11::detail::type_caster_base<type>::make_copy_constructor<std::vector<gemmi::Assembly>, void>::<lambda(const void*)>::_FUN(const void*)’:
2022-12-23T04:13:00,818   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:13:00,818     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:00,818         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,818     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:00,819         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,819     149 |            && __assignable>::
2022-12-23T04:13:00,819         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:00,819     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:00,819         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,379   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’:
2022-12-23T04:13:02,379   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,379      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:13:02,379         |         ^~~~~~~~~~~~~
2022-12-23T04:13:02,380   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,505   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator<gemmi::ExperimentInfo>]’:
2022-12-23T04:13:02,505   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,505     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:02,505         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,505     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:02,506         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,506     149 |            && __assignable>::
2022-12-23T04:13:02,506         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,506     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:02,506         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,802   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’:
2022-12-23T04:13:02,803   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,803      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:13:02,803         |         ^~~~~~~~~~~~~
2022-12-23T04:13:02,803   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,964   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator<gemmi::CrystalInfo>]’:
2022-12-23T04:13:02,964   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:13:02,965     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:02,965         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,965     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:02,965         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,965     149 |            && __assignable>::
2022-12-23T04:13:02,965         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:02,965     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:02,965         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:03,366   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:13:03,367                    from /usr/include/c++/10/functional:62,
2022-12-23T04:13:03,367                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:13:03,367                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:13:03,367                    from include/gemmi/model.hpp:8,
2022-12-23T04:13:03,367                    from python/mol.cpp:3:
2022-12-23T04:13:03,367   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::merge_atoms_in_expanded_model(gemmi::Model&, const gemmi::UnitCell&, double)’:
2022-12-23T04:13:03,367   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:13:03,367    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:13:03,368         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:03,783   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::transform_to_assembly(gemmi::Structure&, const string&, gemmi::HowToNameCopiedChain, std::ostream*)’:
2022-12-23T04:13:03,783   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:13:03,784    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:13:03,784         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:13:04,303   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_mol(pybind11::module&)::<lambda(gemmi::Residue&, const string&, char, gemmi::Element)>, void, {gemmi::Residue&, const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, char, gemmi::Element}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:13:04,303   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:13:04,304    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:13:04,304         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,500   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:13:04,500                    from /usr/include/c++/10/functional:62,
2022-12-23T04:13:04,500                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:13:04,500                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:13:04,500                    from include/gemmi/model.hpp:8,
2022-12-23T04:13:04,501                    from python/mol.cpp:3:
2022-12-23T04:13:04,501   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’:
2022-12-23T04:13:04,501   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:13:04,501      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:13:04,501         |         ^~~~~~~~~~~~~
2022-12-23T04:13:04,501   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:13:04,612   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’:
2022-12-23T04:13:04,612   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:13:04,612     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:04,612         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,612     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:04,612         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,612     149 |            && __assignable>::
2022-12-23T04:13:04,612         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,613     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:04,613         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,738   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’:
2022-12-23T04:13:04,738   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:13:04,738     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:04,738         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,739     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:04,739         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,739     149 |            && __assignable>::
2022-12-23T04:13:04,739         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,739     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:04,739         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,739   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:13:04,740     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:04,740         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,740     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:04,740         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,740     149 |            && __assignable>::
2022-12-23T04:13:04,740         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,740     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:04,741         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,928   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Structure::Structure(const gemmi::Structure&)’:
2022-12-23T04:13:04,928   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:13:04,928     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:04,929         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,929     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:04,929         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,929     149 |            && __assignable>::
2022-12-23T04:13:04,929         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:04,929     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:04,929         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:05,232   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator<gemmi::TlsGroup>]’:
2022-12-23T04:13:05,232   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:13:05,232     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:13:05,232         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:05,232     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:13:05,232         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:05,233     149 |            && __assignable>::
2022-12-23T04:13:05,233         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:05,233     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:13:05,233         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:07,438   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/monlib.cpp -o build/temp.linux-armv7l-cpython-39/python/monlib.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:13:50,911   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:13:50,911                    from include/gemmi/monlib.hpp:12,
2022-12-23T04:13:50,911                    from python/monlib.cpp:3:
2022-12-23T04:13:50,911   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:13:50,911   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:13:50,911     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:13:50,912         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:50,991   /usr/include/c++/10/bits/vector.tcc: In member function ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const string&)’:
2022-12-23T04:13:50,991   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:13:50,991     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:13:50,992         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,185   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:13:51,185   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:13:51,185     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:13:51,186         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,257   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:13:51,257   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:13:51,257     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:13:51,258         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,331   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:13:51,331   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:13:51,331     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:13:51,332         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,416   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:13:51,416   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:13:51,416     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:13:51,416         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,532   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:13:51,532   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:13:51,532     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:13:51,532         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:13:51,662   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:13:51,663   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:13:51,663     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:13:51,663         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:10,896   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:14:10,896                    from include/gemmi/monlib.hpp:12,
2022-12-23T04:14:10,896                    from python/monlib.cpp:3:
2022-12-23T04:14:10,897   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’:
2022-12-23T04:14:10,897   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:14:10,897      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:14:10,897         |         ^~~~~~~~~~~~~
2022-12-23T04:14:10,897   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:14:11,079   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’:
2022-12-23T04:14:11,079   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:14:11,079     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:14:11,079         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:11,079     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:14:11,079         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:11,080     149 |            && __assignable>::
2022-12-23T04:14:11,080         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:11,080     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:14:11,080         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:12,591   /usr/include/c++/10/bits/stl_uninitialized.h: In function ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:14:12,591   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:14:12,591     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:14:12,591         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:12,591     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:14:12,591         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:12,592     149 |            && __assignable>::
2022-12-23T04:14:12,592         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:12,592     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:14:12,592         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:14:14,920   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/mtz.cpp -o build/temp.linux-armv7l-cpython-39/python/mtz.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:15:08,403   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:15:08,403                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:08,403                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:08,403                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:08,404                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:08,404                    from python/mtz.cpp:3:
2022-12-23T04:15:08,404   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:15:08,404   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:15:08,404     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:15:08,404         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:08,432   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:15:08,432   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:15:08,432     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:15:08,433         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:09,114   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:09,114   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:09,114     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:15:09,115         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:09,205   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:09,205   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:09,206     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:15:09,206         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:12,068   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Mtz::Dataset&}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:12,068   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:12,068     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:15:12,069         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:12,216   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:12,216   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::const_iterator’ changed in GCC 7.1
2022-12-23T04:15:12,216     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:15:12,217         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:12,218   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:12,218     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:15:12,219         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:12,351   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:12,351   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:12,351     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:15:12,351         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:12,352   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:12,467   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:12,468   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:12,468     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:15:12,468         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:13,720   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:13,720   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::iterator’ changed in GCC 7.1
2022-12-23T04:15:13,720     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:15:13,720         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:13,813   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator<gemmi::Mtz::Dataset>]’:
2022-12-23T04:15:13,813   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:13,813     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:15:13,813         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:23,837   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:15:23,837                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:23,837                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:23,837                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:23,838                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:23,838                    from python/mtz.cpp:3:
2022-12-23T04:15:23,838   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, pybind11::slice)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:23,838   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:23,838    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:15:23,838         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:24,036   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(const std::vector<gemmi::Mtz::Dataset>&, pybind11::slice)>, std::vector<gemmi::Mtz::Dataset>*, {const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:24,036   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:24,037    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:15:24,037         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:15:24,157   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, const T&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, const gemmi::Mtz::Dataset&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:24,157   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:24,157    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:15:24,157         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:15:24,737   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:15:24,738                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:24,738                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:24,738                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:24,738                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:24,738                    from python/mtz.cpp:3:
2022-12-23T04:15:24,738   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, const pybind11::iterable&)>’:
2022-12-23T04:15:24,739   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:24,739     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:15:24,739         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:24,739   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:15:24,739                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:24,739                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:24,740                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:24,740                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:24,740                    from python/mtz.cpp:3:
2022-12-23T04:15:24,740   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:24,740    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:15:24,740         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:25,079   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:15:25,080                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:25,080                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:25,080                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:25,080                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:25,080                    from python/mtz.cpp:3:
2022-12-23T04:15:25,080   /usr/include/c++/10/bits/vector.tcc: In function ‘pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(const pybind11::iterable&)>’:
2022-12-23T04:15:25,081   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:25,081     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:15:25,081         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:34,083   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:15:34,083                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:34,083                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:34,083                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:34,083                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:34,083                    from python/mtz.cpp:3:
2022-12-23T04:15:34,084   /usr/include/c++/10/bits/stl_vector.h: In function ‘pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType)>, gemmi::Mtz::Dataset, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>’:
2022-12-23T04:15:34,084   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:34,084    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:15:34,084         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:34,129   In file included from python/mtz.cpp:11:
2022-12-23T04:15:34,130   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType, const T&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int, const gemmi::Mtz::Dataset&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:34,130   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::Mtz::Dataset>::const_iterator’ changed in GCC 7.1
2022-12-23T04:15:34,130     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:15:34,130         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:15:34,419   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:15:34,420                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:34,420                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:34,420                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:34,420                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:34,420                    from python/mtz.cpp:3:
2022-12-23T04:15:34,420   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, DiffType)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:34,420   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:34,421    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:15:34,421         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:34,955   In file included from python/common.h:3,
2022-12-23T04:15:34,955                    from python/mtz.cpp:9:
2022-12-23T04:15:34,955   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >, gemmi::Mtz::Dataset&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’:
2022-12-23T04:15:34,955   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:34,955    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:15:34,955         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:15:34,956   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:34,956   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:35,021   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&)>, pybind11::iterator, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:35,022   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:35,022    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:15:35,022         |                                                                                           ^
2022-12-23T04:15:39,164   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:15:39,165                    from /usr/include/c++/10/functional:62,
2022-12-23T04:15:39,165                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:15:39,165                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:15:39,165                    from include/gemmi/mtz.hpp:13,
2022-12-23T04:15:39,165                    from python/mtz.cpp:3:
2022-12-23T04:15:39,166   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >; _ForwardIterator = gemmi::Mtz::Dataset*; bool _TrivialValueTypes = false]’:
2022-12-23T04:15:39,166   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,166      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:15:39,166         |         ^~~~~~~~~~~~~
2022-12-23T04:15:39,166   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,245   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::constructor<Args>::execute<pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > >, {char [17]}, 0>::<lambda(pybind11::detail::value_and_holder&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {pybind11::detail::value_and_holder&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor, char [17]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:39,245   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,245     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:15:39,245         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,246     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:15:39,246         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,246     149 |            && __assignable>::
2022-12-23T04:15:39,246         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,246     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:15:39,246         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,319   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::Mtz::Dataset>, pybind11::class_<std::vector<gemmi::Mtz::Dataset>, std::unique_ptr<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >, std::default_delete<std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> > > > > >::<lambda(std::vector<gemmi::Mtz::Dataset>&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:39,319   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,320     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:15:39,320         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,320     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:15:39,320         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,320     149 |            && __assignable>::
2022-12-23T04:15:39,320         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,320     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:15:39,320         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,321   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,321     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:15:39,321         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,321     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:15:39,321         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,321     149 |            && __assignable>::
2022-12-23T04:15:39,321         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,322     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:15:39,322         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,457   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::class_<type_, options>::def_readwrite<gemmi::Mtz, std::vector<gemmi::Mtz::Dataset>, {}>::<lambda(pybind11::class_<gemmi::Mtz>::type&, const std::vector<gemmi::Mtz::Dataset>&)>, void, {gemmi::Mtz&, const std::vector<gemmi::Mtz::Dataset, std::allocator<gemmi::Mtz::Dataset> >&}, {pybind11::is_method}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:15:39,458   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Mtz::Dataset*, std::vector<gemmi::Mtz::Dataset> >’ changed in GCC 7.1
2022-12-23T04:15:39,458     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:15:39,458         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,458     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:15:39,458         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,458     149 |            && __assignable>::
2022-12-23T04:15:39,458         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:39,459     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:15:39,459         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:15:49,418   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/read.cpp -o build/temp.linux-armv7l-cpython-39/python/read.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:16:33,971   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:16:33,971                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:33,972                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:33,972                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:33,972                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:33,972                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:33,972                    from python/read.cpp:3:
2022-12-23T04:16:33,972   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:16:33,972   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:16:33,973     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:33,973         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:34,012   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:16:34,012   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:16:34,095   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector<gemmi::NcsOp>&)’:
2022-12-23T04:16:34,096   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:16:34,096     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:34,096         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:34,096   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:16:34,096     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:34,096         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:34,191   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::AtomType&}; _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator<gemmi::SmallStructure::AtomType>]’:
2022-12-23T04:16:34,191   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::AtomType>::iterator’ changed in GCC 7.1
2022-12-23T04:16:34,191     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:34,192         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:35,345   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:16:35,345   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:16:35,525   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:16:35,525   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:16:35,525     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:35,525         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:35,712   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:16:35,713   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:16:35,713     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:35,713         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:35,767   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:16:35,767   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:16:35,767     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:35,767         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:35,898   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator<gemmi::ExperimentInfo>]’:
2022-12-23T04:16:35,898   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ExperimentInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:35,899     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:35,899         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:35,962   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator<gemmi::ExperimentInfo>]’:
2022-12-23T04:16:35,962   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:16:35,962     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:35,962         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,031   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator<gemmi::CrystalInfo>]’:
2022-12-23T04:16:36,032   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::CrystalInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:36,032     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:36,032         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,096   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator<gemmi::CrystalInfo>]’:
2022-12-23T04:16:36,097   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:16:36,097     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:36,097         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,270   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator<gemmi::DiffractionInfo>]’:
2022-12-23T04:16:36,270   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::DiffractionInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:36,270     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:36,271         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,469   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator<gemmi::DiffractionInfo>]’:
2022-12-23T04:16:36,469   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::DiffractionInfo*, std::vector<gemmi::DiffractionInfo> >’ changed in GCC 7.1
2022-12-23T04:16:36,469     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:36,469         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,781   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:16:36,781   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:16:36,781     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:36,781         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:36,858   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:16:36,858   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:16:36,858     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:36,859         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:37,070   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator<gemmi::TlsGroup>]’:
2022-12-23T04:16:37,070   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::TlsGroup>::iterator’ changed in GCC 7.1
2022-12-23T04:16:37,070     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:37,070         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:37,228   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator<gemmi::BasicRefinementInfo>]’:
2022-12-23T04:16:37,228   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::BasicRefinementInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:37,275   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator<gemmi::ReflectionsInfo>]’:
2022-12-23T04:16:37,275   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::ReflectionsInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:42,758   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:16:42,758   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:16:42,758   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:16:42,838   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’:
2022-12-23T04:16:42,838   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:16:42,838     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:42,838         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:42,998   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2022-12-23T04:16:42,998   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:42,999     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:16:42,999         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:42,999   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:42,999   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:43,063   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:16:43,063                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:43,063                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:43,063                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:43,063                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:43,064                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:43,064                    from python/read.cpp:3:
2022-12-23T04:16:43,064   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::SmallStructure::remove_hydrogens()’:
2022-12-23T04:16:43,064   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:43,064    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:16:43,064         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:43,412   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:16:43,412                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:43,412                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:43,412                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:43,413                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:43,413                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:43,413                    from python/read.cpp:3:
2022-12-23T04:16:43,413   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::SmallStructure::Site}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2022-12-23T04:16:43,413   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:43,413     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:43,413         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:43,513   /usr/include/c++/10/bits/vector.tcc: In function ‘gemmi::SmallStructure gemmi::mx_to_sx_structure(const gemmi::Structure&, int)’:
2022-12-23T04:16:43,513   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:43,513     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:43,513         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:43,798   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:16:43,798   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly>::iterator’ changed in GCC 7.1
2022-12-23T04:16:43,798     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:43,798         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:43,869   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >}; _Tp = gemmi::Assembly; _Alloc = std::allocator<gemmi::Assembly>]’:
2022-12-23T04:16:43,869   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:16:43,869     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:43,870         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:44,036   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:16:44,036   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::NcsOp>::iterator’ changed in GCC 7.1
2022-12-23T04:16:44,036     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:44,036         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:44,075   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator<gemmi::NcsOp>]’:
2022-12-23T04:16:44,075   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::NcsOp*, std::vector<gemmi::NcsOp> >’ changed in GCC 7.1
2022-12-23T04:16:44,075     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:44,075         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:46,475   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::impl::read_connectivity(gemmi::cif::Block&, gemmi::Structure&)’:
2022-12-23T04:16:46,475   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:16:46,475     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:46,475         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:47,167   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::read_remark_200_230_240(const char*, gemmi::Metadata&, std::string*&)’:
2022-12-23T04:16:47,167   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::ReflectionsInfo*, std::vector<gemmi::ReflectionsInfo> >’ changed in GCC 7.1
2022-12-23T04:16:47,168     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:47,168         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:48,166   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2022-12-23T04:16:48,167   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:48,167     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:48,167         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:48,289   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2022-12-23T04:16:48,289   /usr/include/c++/10/bits/vector.tcc:130:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::const_iterator’ changed in GCC 7.1
2022-12-23T04:16:48,290     130 |     vector<_Tp, _Alloc>::
2022-12-23T04:16:48,290         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:48,291   /usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:48,291     161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
2022-12-23T04:16:48,291         |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:48,475   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:16:48,475                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:48,475                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:48,475                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:48,475                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:48,475                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:48,475                    from python/read.cpp:3:
2022-12-23T04:16:48,476   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<gemmi::SmallStructure::Site> gemmi::SmallStructure::get_all_unit_cell_sites() const’:
2022-12-23T04:16:48,476   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:48,476    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:16:48,476         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:16:48,476   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:48,477    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:16:48,477         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:16:48,807   /usr/include/c++/10/bits/stl_vector.h: In function ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const gemmi::cif::Block&)’:
2022-12-23T04:16:48,808   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:16:48,808    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:16:48,808         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:16:48,811   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::AtomType*, std::vector<gemmi::SmallStructure::AtomType> >’ changed in GCC 7.1
2022-12-23T04:16:48,811    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:16:48,811         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:16:52,106   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:16:52,106                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:52,107                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:52,107                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:52,107                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:52,107                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:52,107                    from python/read.cpp:3:
2022-12-23T04:16:52,107   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator<gemmi::Assembly::Operator>]’:
2022-12-23T04:16:52,107   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Assembly::Operator>::iterator’ changed in GCC 7.1
2022-12-23T04:16:52,107     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:52,108         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:52,338   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:16:52,338                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:52,338                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:52,338                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:52,338                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:52,339                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:52,339                    from python/read.cpp:3:
2022-12-23T04:16:52,339   /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<gemmi::Assembly> gemmi::impl::read_assemblies(gemmi::cif::Block&)’:
2022-12-23T04:16:52,339   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Assembly::Operator*, std::vector<gemmi::Assembly::Operator> >’ changed in GCC 7.1
2022-12-23T04:16:52,339    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:16:52,340         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:16:53,192   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:16:53,192                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:53,192                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:53,192                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:53,192                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:53,192                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:53,193                    from python/read.cpp:3:
2022-12-23T04:16:53,193   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator<gemmi::RefinementInfo>]’:
2022-12-23T04:16:53,193   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo>::iterator’ changed in GCC 7.1
2022-12-23T04:16:53,193     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:53,193         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:53,308   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator<gemmi::RefinementInfo>]’:
2022-12-23T04:16:53,308   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2022-12-23T04:16:53,308     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:53,308         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:56,840   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator<gemmi::SmallStructure::Site>]’:
2022-12-23T04:16:56,840   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:56,840     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:16:56,841         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:56,841   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::iterator’ changed in GCC 7.1
2022-12-23T04:16:58,219   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:16:58,219                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:58,219                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:58,219                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:58,220                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:58,220                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:58,220                    from python/read.cpp:3:
2022-12-23T04:16:58,220   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’:
2022-12-23T04:16:58,220   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:16:58,220      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:16:58,220         |         ^~~~~~~~~~~~~
2022-12-23T04:16:58,220   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:16:58,311   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:16:58,312                    from /usr/include/c++/10/functional:62,
2022-12-23T04:16:58,312                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:16:58,312                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:16:58,312                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:16:58,312                    from include/gemmi/numb.hpp:14,
2022-12-23T04:16:58,312                    from python/read.cpp:3:
2022-12-23T04:16:58,313   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator<gemmi::RefinementInfo::Restr>]’:
2022-12-23T04:16:58,313   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo::Restr>::iterator’ changed in GCC 7.1
2022-12-23T04:16:58,313     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:58,313         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:58,389   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::add_restraint_count_weight(gemmi::RefinementInfo&, const char*, const char*)’:
2022-12-23T04:16:58,389   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo::Restr*, std::vector<gemmi::RefinementInfo::Restr> >’ changed in GCC 7.1
2022-12-23T04:16:58,389     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:58,389         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:58,458   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator<gemmi::RefinementInfo::Restr>]’:
2022-12-23T04:16:58,458   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::RefinementInfo::Restr>::iterator’ changed in GCC 7.1
2022-12-23T04:16:58,458     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:16:58,458         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:58,537   /usr/include/c++/10/bits/vector.tcc: In function ‘T& gemmi::impl::find_or_add(std::vector<Value>&, const string&) [with T = gemmi::RefinementInfo::Restr]’:
2022-12-23T04:16:58,538   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::RefinementInfo::Restr*, std::vector<gemmi::RefinementInfo::Restr> >’ changed in GCC 7.1
2022-12-23T04:16:58,538     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:58,538         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:58,666   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’:
2022-12-23T04:16:58,666   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:16:58,666     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:58,666         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:16:58,669   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::BasicRefinementInfo*, std::vector<gemmi::BasicRefinementInfo> >’ changed in GCC 7.1
2022-12-23T04:16:58,669     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:16:58,669         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:08,996   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:17:08,997                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:08,997                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:08,997                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:08,997                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:08,997                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:08,997                    from python/read.cpp:3:
2022-12-23T04:17:08,998   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, const T&)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, const gemmi::SmallStructure::Site&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:08,998   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:08,998    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:17:08,998         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:17:09,049   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(const std::vector<gemmi::SmallStructure::Site>&, pybind11::slice)>, std::vector<gemmi::SmallStructure::Site>*, {const std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:09,049   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:09,050    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:17:09,050         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:17:09,276   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_small(pybind11::module&)::<lambda(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&)>, void, {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}, {pybind11::name, pybind11::is_method, pybind11::sibling}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:09,277   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:09,277    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:17:09,277         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:17:09,382   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:17:09,382                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:09,383                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:09,383                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:09,383                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:09,383                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:09,383                    from python/read.cpp:3:
2022-12-23T04:17:09,383   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, const pybind11::iterable&)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:09,383   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:09,384     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:17:09,384         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:09,384   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:17:09,384                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:09,384                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:09,384                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:09,384                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:09,384                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:09,385                    from python/read.cpp:3:
2022-12-23T04:17:09,385   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:09,385    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:17:09,385         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:10,389   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:17:10,389                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:10,389                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:10,389                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:10,390                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:10,390                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:10,390                    from python/read.cpp:3:
2022-12-23T04:17:10,390   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::initimpl::factory<Func, pybind11::detail::void_type (*)(), Return(Args ...)>::execute<pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > >, {}>::<lambda(pybind11::detail::value_and_holder&, const pybind11::iterable&)>, void, {pybind11::detail::value_and_holder&, const pybind11::iterable&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:10,390   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:10,390     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:17:10,390         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:10,569   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:17:10,569                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:10,569                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:10,569                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:10,569                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:10,570                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:10,570                    from python/read.cpp:3:
2022-12-23T04:17:10,570   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, pybind11::slice)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, pybind11::slice}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:10,570   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:10,570    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:17:10,570         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,304   In file included from python/common.h:3,
2022-12-23T04:17:14,304                    from python/read.cpp:17:
2022-12-23T04:17:14,304   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = pybind11::detail::iterator_access<__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >, gemmi::SmallStructure::Site&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >; Sentinel = __gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >; ValueType = gemmi::SmallStructure::Site&; Extra = {}]’:
2022-12-23T04:17:14,305   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:14,305    2356 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) {
2022-12-23T04:17:14,305         |          ^~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,305   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:14,305   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2356:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:14,367   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_accessor<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&)>, pybind11::iterator, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1>}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:14,367   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:2399:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:14,368    2399 |                                       Extra...>(first, last, std::forward<Extra>(extra)...);
2022-12-23T04:17:14,368         |                                                                                           ^
2022-12-23T04:17:14,456   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:17:14,456                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:14,456                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:14,456                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:14,456                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:14,456                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:14,457                    from python/read.cpp:3:
2022-12-23T04:17:14,457   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’:
2022-12-23T04:17:14,457   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:17:14,457      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:17:14,457         |         ^~~~~~~~~~~~~
2022-12-23T04:17:14,457   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:17:14,535   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’:
2022-12-23T04:17:14,546   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,547   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,595   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’:
2022-12-23T04:17:14,596   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:17:14,596   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:17:14,689   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’:
2022-12-23T04:17:14,689   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,689   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,691   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::TlsGroup*, std::vector<gemmi::TlsGroup> >’ changed in GCC 7.1
2022-12-23T04:17:14,691     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:14,691         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,692     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:14,692         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,692     149 |            && __assignable>::
2022-12-23T04:17:14,692         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,692     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:14,692         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,823   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’:
2022-12-23T04:17:14,823   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::ExperimentInfo*, std::vector<gemmi::ExperimentInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,824     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:14,824         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,824     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:14,824         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,824     149 |            && __assignable>::
2022-12-23T04:17:14,824         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,824     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:14,824         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,825   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::CrystalInfo*, std::vector<gemmi::CrystalInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,825     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:14,825         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,825     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:14,826         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,826     149 |            && __assignable>::
2022-12-23T04:17:14,826         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,826     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:14,826         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,827   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::RefinementInfo*, std::vector<gemmi::RefinementInfo> >’ changed in GCC 7.1
2022-12-23T04:17:14,827     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:14,827         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,827     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:14,827         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,827     149 |            && __assignable>::
2022-12-23T04:17:14,827         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:14,828     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:14,828         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,078   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:17:15,079                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:15,079                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:15,079                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:15,079                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:15,079                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:15,079                    from python/read.cpp:3:
2022-12-23T04:17:15,080   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, DiffType)>, gemmi::SmallStructure::Site, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:15,080   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:15,080    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:17:15,080         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,126   In file included from python/read.cpp:19:
2022-12-23T04:17:15,126   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, DiffType, const T&)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, int, const gemmi::SmallStructure::Site&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:15,126   /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/stl_bind.h:198:21: note: parameter passing for argument of type ‘std::vector<gemmi::SmallStructure::Site>::const_iterator’ changed in GCC 7.1
2022-12-23T04:17:15,126     198 |             v.insert(v.begin() + i, x);
2022-12-23T04:17:15,127         |             ~~~~~~~~^~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,372   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:17:15,372                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:15,372                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:15,373                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:15,373                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:15,373                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:15,373                    from python/read.cpp:3:
2022-12-23T04:17:15,373   /usr/include/c++/10/bits/stl_vector.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, DiffType)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, int}, {pybind11::name, pybind11::is_method, pybind11::sibling, char [40]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:15,373   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:15,373    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:17:15,373         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,705   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:17:15,705                    from /usr/include/c++/10/functional:62,
2022-12-23T04:17:15,705                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:17:15,705                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:17:15,706                    from include/gemmi/third_party/fast_float.h:1701,
2022-12-23T04:17:15,706                    from include/gemmi/numb.hpp:14,
2022-12-23T04:17:15,706                    from python/read.cpp:3:
2022-12-23T04:17:15,706   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >; _ForwardIterator = gemmi::SmallStructure::Site*; bool _TrivialValueTypes = false]’:
2022-12-23T04:17:15,706   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:15,706      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:17:15,706         |         ^~~~~~~~~~~~~
2022-12-23T04:17:15,707   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:15,770   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<pybind11::detail::vector_modifiers<std::vector<gemmi::SmallStructure::Site>, pybind11::class_<std::vector<gemmi::SmallStructure::Site>, std::unique_ptr<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >, std::default_delete<std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> > > > > >::<lambda(std::vector<gemmi::SmallStructure::Site>&, const std::vector<gemmi::SmallStructure::Site>&)>, void, {std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&, const std::vector<gemmi::SmallStructure::Site, std::allocator<gemmi::SmallStructure::Site> >&}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:17:15,770   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::SmallStructure::Site*, std::vector<gemmi::SmallStructure::Site> >’ changed in GCC 7.1
2022-12-23T04:17:15,770     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:15,771         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,771     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:15,771         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,771     149 |            && __assignable>::
2022-12-23T04:17:15,771         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:15,771     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:15,771         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:16,008   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Structure::Structure(const gemmi::Structure&)’:
2022-12-23T04:17:16,008   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Assembly*, std::vector<gemmi::Assembly> >’ changed in GCC 7.1
2022-12-23T04:17:16,008     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:17:16,008         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:16,008     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:17:16,009         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:16,009     149 |            && __assignable>::
2022-12-23T04:17:16,009         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:16,009     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:17:16,009         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:17:21,703   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/recgrid.cpp -o build/temp.linux-armv7l-cpython-39/python/recgrid.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:18:04,246   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:18:04,246                    from /usr/include/c++/10/functional:62,
2022-12-23T04:18:04,246                    from /usr/include/c++/10/pstl/glue_algorithm_defs.h:13,
2022-12-23T04:18:04,246                    from /usr/include/c++/10/algorithm:74,
2022-12-23T04:18:04,246                    from include/gemmi/asudata.hpp:9,
2022-12-23T04:18:04,247                    from include/gemmi/recgrid.hpp:8,
2022-12-23T04:18:04,247                    from python/recgrid.cpp:3:
2022-12-23T04:18:04,247   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:18:04,247   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:18:04,247     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:18:04,247         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:18:06,557   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’:
2022-12-23T04:18:06,558   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:18:06,558     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:18:06,558         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:18:37,772   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/scaling.cpp -o build/temp.linux-armv7l-cpython-39/python/scaling.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:18:53,546   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:18:53,547                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:18:53,547                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:18:53,547                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:18:53,547                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:18:53,547                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:18:53,547                    from python/common.h:3,
2022-12-23T04:18:53,547                    from python/scaling.cpp:3:
2022-12-23T04:18:53,548   /usr/include/c++/10/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const double*; _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:18:53,548   /usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:18:53,548     721 |       vector<_Tp, _Alloc>::
2022-12-23T04:18:53,548         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:18:57,609   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Scaling<float>::Point}; _Tp = gemmi::Scaling<float>::Point; _Alloc = std::allocator<gemmi::Scaling<float>::Point>]’:
2022-12-23T04:18:57,610   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Scaling<float>::Point, std::allocator<gemmi::Scaling<float>::Point> >::iterator’ changed in GCC 7.1
2022-12-23T04:18:57,610     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:18:57,610         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:18:57,679   /usr/include/c++/10/bits/vector.tcc: In member function ‘void gemmi::Scaling<Real>::prepare_points(const gemmi::AsuData<std::complex<_Tp> >&, const gemmi::AsuData<gemmi::ValueSigma<Real> >&, const gemmi::AsuData<std::complex<_Tp> >&) [with Real = float]’:
2022-12-23T04:18:57,679   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Scaling<float>::Point*, std::vector<gemmi::Scaling<float>::Point, std::allocator<gemmi::Scaling<float>::Point> > >’ changed in GCC 7.1
2022-12-23T04:18:57,679     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:18:57,679         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,855   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:19:04,855   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:19:04,855     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:19:04,855         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,856   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:19:04,889   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:19:04,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:19:04,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:19:04,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:19:04,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:19:04,890                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:19:04,890                    from python/common.h:3,
2022-12-23T04:19:04,890                    from python/scaling.cpp:3:
2022-12-23T04:19:04,891   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<double> gemmi::Scaling<Real>::get_parameters() const [with Real = float]’:
2022-12-23T04:19:04,891   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,891    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:04,891         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:04,891   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,891    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:04,892         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:04,892   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,892    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:04,892         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:04,892   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,892    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,892         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,893    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,893         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,893   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,893    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,893         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,893    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,893         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,893   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,894    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,894         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,894    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,894         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,894   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,894    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,894         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,894    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,894         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,895   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,895    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,895         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,895    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,895         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,895   /usr/include/c++/10/bits/stl_vector.h:1313:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,895    1313 |  _M_range_insert(begin() + __offset, __l.begin(), __l.end(),
2022-12-23T04:19:04,895         |  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,896    1314 |    std::random_access_iterator_tag());
2022-12-23T04:19:04,896         |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,896   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,896    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:04,896         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:04,931   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:19:04,931                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:19:04,931                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:19:04,931                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:19:04,931                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:19:04,931                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:19:04,932                    from python/common.h:3,
2022-12-23T04:19:04,932                    from python/scaling.cpp:3:
2022-12-23T04:19:04,932   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:19:04,932   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:19:04,932     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:19:04,932         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:04,964   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<double> gemmi::Scaling<Real>::compute_values() const [with Real = float]’:
2022-12-23T04:19:04,964   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:19:04,964     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:19:04,964         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:06,297   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/search.cpp -o build/temp.linux-armv7l-cpython-39/python/search.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:19:42,347   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:19:42,347                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:19:42,347                    from python/search.cpp:3:
2022-12-23T04:19:42,347   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:19:42,347   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:19:42,347     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:19:42,348         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:42,617   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator<gemmi::Fractional>]’:
2022-12-23T04:19:42,617   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Fractional>::iterator’ changed in GCC 7.1
2022-12-23T04:19:42,725   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:19:42,725                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:19:42,725                    from python/search.cpp:3:
2022-12-23T04:19:42,725   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’:
2022-12-23T04:19:42,725   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Fractional*, std::vector<gemmi::Fractional> >’ changed in GCC 7.1
2022-12-23T04:19:42,725    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:42,726         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:45,392   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:19:45,393                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:19:45,393                    from python/search.cpp:3:
2022-12-23T04:19:45,393   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:19:45,393   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:19:45,393     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:19:45,393         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:19:45,551   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:19:45,551                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:19:45,552                    from python/search.cpp:3:
2022-12-23T04:19:45,552   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::set_bounding_cell(const gemmi::UnitCell&)’:
2022-12-23T04:19:45,552   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:19:45,552    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:19:45,552         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:19:45,554   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:19:45,555                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:19:45,555                    from python/search.cpp:3:
2022-12-23T04:19:45,555   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:19:45,555     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:19:45,555         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:04,515   In file included from /usr/include/c++/10/vector:66,
2022-12-23T04:20:04,515                    from include/gemmi/neighbor.hpp:9,
2022-12-23T04:20:04,515                    from python/search.cpp:3:
2022-12-23T04:20:04,516   /usr/include/c++/10/bits/stl_uninitialized.h: In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’:
2022-12-23T04:20:04,516   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:20:04,516      84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
2022-12-23T04:20:04,516         |         ^~~~~~~~~~~~~
2022-12-23T04:20:04,516   /usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:20:04,662   /usr/include/c++/10/bits/stl_uninitialized.h: In copy constructor ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’:
2022-12-23T04:20:04,662   /usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<const gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:20:04,662     147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
2022-12-23T04:20:04,663         |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:04,663     148 |            && __is_trivial(_ValueType2)
2022-12-23T04:20:04,663         |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:04,663     149 |            && __assignable>::
2022-12-23T04:20:04,663         |            ~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:04,663     150 |  __uninit_copy(__first, __last, __result);
2022-12-23T04:20:04,663         |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:05,473   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/sf.cpp -o build/temp.linux-armv7l-cpython-39/python/sf.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:20:19,669   In file included from include/gemmi/it92.hpp:16,
2022-12-23T04:20:19,669                    from python/sf.cpp:6:
2022-12-23T04:20:19,670   include/gemmi/formfact.hpp: In instantiation of ‘std::pair<_ForwardIterator, _ForwardIterator> gemmi::ExpSum<N, Real>::calculate_with_derivative(Real) const [with int N = 5; Real = double]’:
2022-12-23T04:20:19,670   include/gemmi/dencalc.hpp:19:54:   required from ‘double gemmi::determine_cutoff_radius(double, const PrecalExpSum&, double) [with PrecalExpSum = gemmi::ExpSum<5, double>]’
2022-12-23T04:20:19,670   include/gemmi/dencalc.hpp:130:35:   required from ‘double gemmi::DensityCalculator<Table, Real>::estimate_radius(const gemmi::ExpSum<N, typename Table::Coef::coef_type>&, double) const [with int N = 5; Table = gemmi::IT92<double>; Real = float; typename Table::Coef::coef_type = double]’
2022-12-23T04:20:19,670   python/sf.cpp:63:36:   required from ‘void add_dencalc(pybind11::module&, const char*) [with Table = gemmi::IT92<double>; pybind11::module = pybind11::module_]’
2022-12-23T04:20:19,670   python/sf.cpp:86:44:   required from here
2022-12-23T04:20:19,670   include/gemmi/formfact.hpp:28:24: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
2022-12-23T04:20:19,671      28 |   std::pair<Real,Real> calculate_with_derivative(Real r) const {
2022-12-23T04:20:19,671         |                        ^~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:45,939   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:20:45,939                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:20:45,939                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:20:45,940                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:20:45,940                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:20:45,940                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:20:45,940                    from python/common.h:3,
2022-12-23T04:20:45,940                    from python/sf.cpp:3:
2022-12-23T04:20:45,940   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:20:45,940   /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:20:45,941     509 |     vector<_Tp, _Alloc>::
2022-12-23T04:20:45,941         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:45,941   /usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2022-12-23T04:20:45,987   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:20:45,987                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../detail/common.h:253,
2022-12-23T04:20:45,987                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../cast.h:13,
2022-12-23T04:20:45,987                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/../attr.h:13,
2022-12-23T04:20:45,987                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/detail/class.h:12,
2022-12-23T04:20:45,988                    from /home/piwheels/.local/lib/python3.9/site-packages/pybind11/include/pybind11/pybind11.h:13,
2022-12-23T04:20:45,988                    from python/common.h:3,
2022-12-23T04:20:45,988                    from python/sf.cpp:3:
2022-12-23T04:20:45,988   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const Miller&) [with Table = gemmi::Neutron92<double>]’:
2022-12-23T04:20:45,988   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:45,988     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:45,988         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:46,034   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const Miller&) [with Table = gemmi::C4322<double>]’:
2022-12-23T04:20:46,034   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:46,034     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:46,034         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:46,086   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const Miller&) [with Table = gemmi::IT92<double>]’:
2022-12-23T04:20:46,087   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:46,087     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:46,087         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:46,352   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_model(const gemmi::Model&, const Miller&) [with Table = gemmi::Neutron92<double>]’:
2022-12-23T04:20:46,352   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:46,352     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:46,353         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:46,607   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_model(const gemmi::Model&, const Miller&) [with Table = gemmi::C4322<double>]’:
2022-12-23T04:20:46,607   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:46,607     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:46,607         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:46,870   /usr/include/c++/10/bits/stl_vector.h: In member function ‘std::complex<double> gemmi::StructureFactorCalculator<Table>::calculate_sf_from_model(const gemmi::Model&, const Miller&) [with Table = gemmi::IT92<double>]’:
2022-12-23T04:20:46,870   /usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2022-12-23T04:20:46,870     960 |    _M_fill_insert(end(), __new_size - size(), __x);
2022-12-23T04:20:46,871         |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:20:50,229   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/sym.cpp -o build/temp.linux-armv7l-cpython-39/python/sym.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:21:38,549   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/topo.cpp -o build/temp.linux-armv7l-cpython-39/python/topo.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:22:28,749   In file included from /usr/include/c++/10/bits/stl_algo.h:61,
2022-12-23T04:22:28,749                    from /usr/include/c++/10/string:52,
2022-12-23T04:22:28,750                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:22:28,750                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:22:28,750                    from /usr/include/c++/10/ios:42,
2022-12-23T04:22:28,750                    from /usr/include/c++/10/ostream:38,
2022-12-23T04:22:28,750                    from include/gemmi/topo.hpp:9,
2022-12-23T04:22:28,750                    from python/topo.cpp:3:
2022-12-23T04:22:28,750   /usr/include/c++/10/bits/stl_heap.h: In function ‘constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >; _Distance = int; _Tp = gemmi::Atom; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::prepare_topology(gemmi::Structure&, gemmi::MonLib&, size_t, gemmi::HydrogenChange, bool, std::ostream*, bool)::<lambda(const gemmi::Atom&, const gemmi::Atom&)> >]’:
2022-12-23T04:22:28,751   /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:28,751     223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
2022-12-23T04:22:28,751         |     ^~~~~~~~~~~~~
2022-12-23T04:22:29,031   In file included from /usr/include/c++/10/string:52,
2022-12-23T04:22:29,031                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:22:29,031                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:22:29,031                    from /usr/include/c++/10/ios:42,
2022-12-23T04:22:29,031                    from /usr/include/c++/10/ostream:38,
2022-12-23T04:22:29,031                    from include/gemmi/topo.hpp:9,
2022-12-23T04:22:29,032                    from python/topo.cpp:3:
2022-12-23T04:22:29,032   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::prepare_topology(gemmi::Structure&, gemmi::MonLib&, size_t, gemmi::HydrogenChange, bool, std::ostream*, bool)::<lambda(const gemmi::Atom&, const gemmi::Atom&)> >]’:
2022-12-23T04:22:29,032   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:29,032    1839 |     __insertion_sort(_RandomAccessIterator __first,
2022-12-23T04:22:29,032         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:22:29,032   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:34,518   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:34,518                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:34,519                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:34,519                    from python/topo.cpp:3:
2022-12-23T04:22:34,519   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:22:34,519   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:22:34,519     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:34,519         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:34,678   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:22:34,679   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:22:34,679     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:22:34,679         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:34,766   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:22:34,766   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:22:34,766     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:34,766         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:34,928   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:22:34,928   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:22:35,108   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator<gemmi::Restraints::Torsion>]’:
2022-12-23T04:22:35,109   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Torsion>::iterator’ changed in GCC 7.1
2022-12-23T04:22:35,109     171 |     vector<_Tp, _Alloc>::
2022-12-23T04:22:35,109         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:35,890   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:22:35,891   /usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:22:35,942   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:35,942                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:35,942                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:35,942                    from python/topo.cpp:3:
2022-12-23T04:22:35,943   /usr/include/c++/10/bits/stl_vector.h: In function ‘bool gemmi::replace_deuterium_with_fraction(gemmi::Residue&)’:
2022-12-23T04:22:35,943   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:35,943    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:22:35,943         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:35,994   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::remove_hydrogens_from_atom(gemmi::Topo::ResInfo*, const string&, char)’:
2022-12-23T04:22:35,994   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:35,995    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:22:35,995         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:36,058   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:36,058                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:36,058                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:36,058                    from python/topo.cpp:3:
2022-12-23T04:22:36,059   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator<gemmi::Atom>]’:
2022-12-23T04:22:36,059   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:22:36,059     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:36,059         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:36,059   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Atom>::iterator’ changed in GCC 7.1
2022-12-23T04:22:36,419   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator<gemmi::Fractional>]’:
2022-12-23T04:22:36,420   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Fractional>::iterator’ changed in GCC 7.1
2022-12-23T04:22:36,580   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:36,580                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:36,580                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:36,581                    from python/topo.cpp:3:
2022-12-23T04:22:36,581   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’:
2022-12-23T04:22:36,581   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Fractional*, std::vector<gemmi::Fractional> >’ changed in GCC 7.1
2022-12-23T04:22:36,581    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:36,581         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:36,951   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:36,951                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:36,951                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:36,951                    from python/topo.cpp:3:
2022-12-23T04:22:36,952   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator<gemmi::Connection>]’:
2022-12-23T04:22:36,952   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Connection>::iterator’ changed in GCC 7.1
2022-12-23T04:22:36,952     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:36,952         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:43,987   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:43,988                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:43,988                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:43,988                    from python/topo.cpp:3:
2022-12-23T04:22:43,988   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::add_hydrogens_without_positions(gemmi::Topo::ResInfo&)’:
2022-12-23T04:22:43,988   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:22:43,988    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:43,988         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:45,256   /usr/include/c++/10/bits/stl_vector.h: In lambda function:
2022-12-23T04:22:45,256   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Connection*, std::vector<gemmi::Connection> >’ changed in GCC 7.1
2022-12-23T04:22:45,256    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:45,257         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:48,478   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:48,478                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:48,478                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:48,478                    from python/topo.cpp:3:
2022-12-23T04:22:48,478   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:22:48,479   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:22:48,479     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:48,479         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:48,479   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:22:48,656   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:48,656                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:48,657                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:48,657                    from python/topo.cpp:3:
2022-12-23T04:22:48,657   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::NeighborSearch::set_bounding_cell(const gemmi::UnitCell&)’:
2022-12-23T04:22:48,657   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:22:48,657    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:48,657         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:48,659   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:48,659                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:48,659                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:48,659                    from python/topo.cpp:3:
2022-12-23T04:22:48,659   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:22:48,659     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:22:48,660         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:48,868   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator<gemmi::Restraints::Plane>]’:
2022-12-23T04:22:48,869   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Plane>::iterator’ changed in GCC 7.1
2022-12-23T04:22:48,869     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:48,869         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:48,948   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:22:48,949   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:22:48,949     184 |     vector<_Tp, _Alloc>::
2022-12-23T04:22:48,949         |     ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:48,949   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:22:49,030   /usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator<gemmi::Restraints::Angle>]’:
2022-12-23T04:22:49,030   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:22:49,031   /usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Angle>::iterator’ changed in GCC 7.1
2022-12-23T04:22:49,121   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:49,122                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:49,122                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:49,122                    from python/topo.cpp:3:
2022-12-23T04:22:49,122   /usr/include/c++/10/bits/stl_vector.h: In function ‘void gemmi::vector_remove_if(std::vector<Value>&, F&&) [with T = gemmi::Restraints::Angle; F = gemmi::ChemMod::apply_to(gemmi::ChemComp&, gemmi::ChemComp::Group) const::<lambda(const gemmi::Restraints::Angle&)>]’:
2022-12-23T04:22:49,122   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:22:49,122    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:22:49,122         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:49,579   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:49,579                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:49,579                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:49,579                    from python/topo.cpp:3:
2022-12-23T04:22:49,580   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:22:49,580   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:22:49,580     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:49,580         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:50,859   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair}; _Tp = gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair; _Alloc = std::allocator<gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair>]’:
2022-12-23T04:22:50,859   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair>::iterator’ changed in GCC 7.1
2022-12-23T04:22:50,877   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair}; _Tp = gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair; _Alloc = std::allocator<gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair>]’:
2022-12-23T04:22:50,877   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair*, std::vector<gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)::Pair> >’ changed in GCC 7.1
2022-12-23T04:22:50,877     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:22:50,877         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:50,957   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom}; _Tp = gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom; _Alloc = std::allocator<gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom>]’:
2022-12-23T04:22:50,957   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom>::iterator’ changed in GCC 7.1
2022-12-23T04:22:50,957     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:50,957         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:51,141   /usr/include/c++/10/bits/vector.tcc: In function ‘void gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)’:
2022-12-23T04:22:51,141   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom*, std::vector<gemmi::place_hydrogens(const gemmi::Topo&, const gemmi::Atom&)::BondedAtom> >’ changed in GCC 7.1
2022-12-23T04:22:51,142     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:22:51,142         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:52,528   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator<gemmi::Restraints::Bond>]’:
2022-12-23T04:22:52,528   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::Restraints::Bond>::iterator’ changed in GCC 7.1
2022-12-23T04:22:52,528     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:22:52,528         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:53,194   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:53,194                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:53,194                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:53,194                    from python/topo.cpp:3:
2022-12-23T04:22:53,195   /usr/include/c++/10/bits/stl_vector.h: In member function ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&, gemmi::ChemComp::Group) const’:
2022-12-23T04:22:53,195   /usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:22:53,195    1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
2022-12-23T04:22:53,195         |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:53,198   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:22:53,198    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:53,198         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:53,199   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:22:53,199    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:22:53,199         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:53,203   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:22:53,203    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:53,203         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:53,206   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:22:53,206    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:53,206         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:53,206   /usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Torsion*, std::vector<gemmi::Restraints::Torsion> >’ changed in GCC 7.1
2022-12-23T04:22:53,207    1431 |       { return _M_erase(begin() + (__position - cbegin())); }
2022-12-23T04:22:53,207         |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:53,211   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:53,211                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:53,211                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:53,211                    from python/topo.cpp:3:
2022-12-23T04:22:53,211   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Plane*, std::vector<gemmi::Restraints::Plane> >’ changed in GCC 7.1
2022-12-23T04:22:53,212     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:22:53,212         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:22:54,319   In file included from /usr/include/c++/10/vector:67,
2022-12-23T04:22:54,319                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:54,320                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:54,320                    from python/topo.cpp:3:
2022-12-23T04:22:54,320   /usr/include/c++/10/bits/stl_vector.h: In function ‘std::unique_ptr<gemmi::ChemComp> gemmi::make_chemcomp_with_restraints(const gemmi::Residue&)’:
2022-12-23T04:22:54,320   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:22:54,320    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:54,320         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:54,324   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Angle*, std::vector<gemmi::Restraints::Angle> >’ changed in GCC 7.1
2022-12-23T04:22:54,324    1198 |    _M_realloc_insert(end(), __x);
2022-12-23T04:22:54,324         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2022-12-23T04:22:55,017   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:22:55,018                    from include/gemmi/chemcomp.hpp:10,
2022-12-23T04:22:55,018                    from include/gemmi/topo.hpp:12,
2022-12-23T04:22:55,018                    from python/topo.cpp:3:
2022-12-23T04:22:55,018   /usr/include/c++/10/bits/vector.tcc: In member function ‘const string& gemmi::MonLib::add_auto_chemlink(const string&, const string&, const string&, const string&, double, double)’:
2022-12-23T04:22:55,018   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Restraints::Bond*, std::vector<gemmi::Restraints::Bond> >’ changed in GCC 7.1
2022-12-23T04:22:55,018     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:22:55,018         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:23:06,082   In file included from /usr/include/c++/10/string:52,
2022-12-23T04:23:06,082                    from /usr/include/c++/10/bits/locale_classes.h:40,
2022-12-23T04:23:06,082                    from /usr/include/c++/10/bits/ios_base.h:41,
2022-12-23T04:23:06,082                    from /usr/include/c++/10/ios:42,
2022-12-23T04:23:06,082                    from /usr/include/c++/10/ostream:38,
2022-12-23T04:23:06,083                    from include/gemmi/topo.hpp:9,
2022-12-23T04:23:06,083                    from python/topo.cpp:3:
2022-12-23T04:23:06,083   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::prepare_topology(gemmi::Structure&, gemmi::MonLib&, size_t, gemmi::HydrogenChange, bool, std::ostream*, bool)::<lambda(const gemmi::Atom&, const gemmi::Atom&)> >]’:
2022-12-23T04:23:06,083   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,083    1945 |     __introsort_loop(_RandomAccessIterator __first,
2022-12-23T04:23:06,083         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:23:06,083   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,087   /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,087    1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
2022-12-23T04:23:06,087         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:23:06,522   /usr/include/c++/10/bits/stl_algo.h: In function ‘std::unique_ptr<gemmi::Topo> gemmi::prepare_topology(gemmi::Structure&, gemmi::MonLib&, size_t, gemmi::HydrogenChange, bool, std::ostream*, bool)’:
2022-12-23T04:23:06,523   /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,523    1974 |    std::__introsort_loop(__first, __last,
2022-12-23T04:23:06,523         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-12-23T04:23:06,523    1975 |     std::__lg(__last - __first) * 2,
2022-12-23T04:23:06,523         |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:23:06,523    1976 |     __comp);
2022-12-23T04:23:06,523         |     ~~~~~~~
2022-12-23T04:23:06,524   /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,524    1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
2022-12-23T04:23:06,524         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:23:06,526   /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::Atom*, std::vector<gemmi::Atom> >’ changed in GCC 7.1
2022-12-23T04:23:06,526    1891 |  std::__insertion_sort(__first, __last, __comp);
2022-12-23T04:23:06,526         |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:23:22,750   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/unitcell.cpp -o build/temp.linux-armv7l-cpython-39/python/unitcell.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:23:55,543   In file included from /usr/include/c++/10/bits/stl_algo.h:61,
2022-12-23T04:23:55,544                    from /usr/include/c++/10/vector:62,
2022-12-23T04:23:55,544                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:23:55,544                    from python/unitcell.cpp:3:
2022-12-23T04:23:55,544   /usr/include/c++/10/bits/stl_heap.h: In function ‘constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >; _Distance = int; _Tp = std::pair<gemmi::Op, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::find_lattice_2fold_ops(const gemmi::UnitCell&, double)::<lambda(const OpObliquity&, const OpObliquity&)> >]’:
2022-12-23T04:23:55,544   /usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:23:55,544     223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
2022-12-23T04:23:55,545         |     ^~~~~~~~~~~~~
2022-12-23T04:23:56,150   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:23:56,150                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:23:56,150                    from python/unitcell.cpp:3:
2022-12-23T04:23:56,150   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::find_lattice_2fold_ops(const gemmi::UnitCell&, double)::<lambda(const OpObliquity&, const OpObliquity&)> >]’:
2022-12-23T04:23:56,150   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:23:56,150    1839 |     __insertion_sort(_RandomAccessIterator __first,
2022-12-23T04:23:56,151         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:23:56,151   /usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:23:59,795   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:23:59,795                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:23:59,795                    from python/unitcell.cpp:3:
2022-12-23T04:23:59,795   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::Op&, double}; _Tp = std::pair<gemmi::Op, double>; _Alloc = std::allocator<std::pair<gemmi::Op, double> >]’:
2022-12-23T04:23:59,796   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<gemmi::Op, double> >::iterator’ changed in GCC 7.1
2022-12-23T04:23:59,796     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:23:59,796         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,427   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator<gemmi::FTransform>]’:
2022-12-23T04:24:01,428   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<gemmi::FTransform>::iterator’ changed in GCC 7.1
2022-12-23T04:24:01,509   /usr/include/c++/10/bits/vector.tcc: In member function ‘gemmi::UnitCell gemmi::UnitCell::changed_basis_backward(const gemmi::Op&, bool)’:
2022-12-23T04:24:01,509   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<gemmi::FTransform*, std::vector<gemmi::FTransform> >’ changed in GCC 7.1
2022-12-23T04:24:01,510     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:24:01,510         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,632   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:24:01,632                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:24:01,633                    from python/unitcell.cpp:3:
2022-12-23T04:24:01,633   /usr/include/c++/10/bits/stl_algo.h: In function ‘constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<gemmi::find_lattice_2fold_ops(const gemmi::UnitCell&, double)::<lambda(const OpObliquity&, const OpObliquity&)> >]’:
2022-12-23T04:24:01,633   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,633    1945 |     __introsort_loop(_RandomAccessIterator __first,
2022-12-23T04:24:01,633         |     ^~~~~~~~~~~~~~~~
2022-12-23T04:24:01,633   /usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,634   /usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,634    1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
2022-12-23T04:24:01,635         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,794   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:24:01,794                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:24:01,794                    from python/unitcell.cpp:3:
2022-12-23T04:24:01,794   /usr/include/c++/10/bits/vector.tcc: In function ‘std::vector<std::pair<gemmi::Op, double> > gemmi::find_lattice_2fold_ops(const gemmi::UnitCell&, double)’:
2022-12-23T04:24:01,794   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,794     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:24:01,795         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,795   In file included from /usr/include/c++/10/vector:62,
2022-12-23T04:24:01,795                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:24:01,795                    from python/unitcell.cpp:3:
2022-12-23T04:24:01,795   /usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,795    1974 |    std::__introsort_loop(__first, __last,
2022-12-23T04:24:01,795         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,796    1975 |     std::__lg(__last - __first) * 2,
2022-12-23T04:24:01,796         |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,796    1976 |     __comp);
2022-12-23T04:24:01,796         |     ~~~~~~~
2022-12-23T04:24:01,796   /usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,796    1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
2022-12-23T04:24:01,796         |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:01,796   /usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<gemmi::Op, double>*, std::vector<std::pair<gemmi::Op, double> > >’ changed in GCC 7.1
2022-12-23T04:24:01,797    1891 |  std::__insertion_sort(__first, __last, __comp);
2022-12-23T04:24:01,797         |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:05,697   In file included from /usr/include/c++/10/vector:72,
2022-12-23T04:24:05,697                    from include/gemmi/unitcell.hpp:10,
2022-12-23T04:24:05,697                    from python/unitcell.cpp:3:
2022-12-23T04:24:05,697   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
2022-12-23T04:24:05,697   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double, std::allocator<double> >::iterator’ changed in GCC 7.1
2022-12-23T04:24:05,698     426 |       vector<_Tp, _Alloc>::
2022-12-23T04:24:05,698         |       ^~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:27,122   /usr/include/c++/10/bits/vector.tcc: In static member function ‘static pybind11::handle pybind11::cpp_function::initialize<add_smat33<double>::<lambda(const M&, pybind11::array_t<int>)>, pybind11::array_t<double, 16>, {const gemmi::SMat33<double>&, pybind11::array_t<int, 16>}, {pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg}>::<lambda(pybind11::detail::function_call&)>::_FUN(pybind11::detail::function_call&)’:
2022-12-23T04:24:27,122   /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >’ changed in GCC 7.1
2022-12-23T04:24:27,122     121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
2022-12-23T04:24:27,123         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2022-12-23T04:24:28,771   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.8\" -Ithird_party/zlib -Iinclude -Ithird_party -I/home/piwheels/.local/lib/python3.9/site-packages/pybind11/include -I/usr/include/python3.9 -c python/write.cpp -o build/temp.linux-armv7l-cpython-39/python/write.o -std=c++20 -fvisibility=hidden -g0
2022-12-23T04:25:30,931   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/python/align.o build/temp.linux-armv7l-cpython-39/python/ccp4.o build/temp.linux-armv7l-cpython-39/python/chemcomp.o build/temp.linux-armv7l-cpython-39/python/cif.o build/temp.linux-armv7l-cpython-39/python/custom.o build/temp.linux-armv7l-cpython-39/python/elem.o build/temp.linux-armv7l-cpython-39/python/gemmi.o build/temp.linux-armv7l-cpython-39/python/grid.o build/temp.linux-armv7l-cpython-39/python/hkl.o build/temp.linux-armv7l-cpython-39/python/meta.o build/temp.linux-armv7l-cpython-39/python/mol.o build/temp.linux-armv7l-cpython-39/python/monlib.o build/temp.linux-armv7l-cpython-39/python/mtz.o build/temp.linux-armv7l-cpython-39/python/read.o build/temp.linux-armv7l-cpython-39/python/recgrid.o build/temp.linux-armv7l-cpython-39/python/scaling.o build/temp.linux-armv7l-cpython-39/python/search.o build/temp.linux-armv7l-cpython-39/python/sf.o build/temp.linux-armv7l-cpython-39/python/sym.o build/temp.linux-armv7l-cpython-39/python/topo.o build/temp.linux-armv7l-cpython-39/python/unitcell.o build/temp.linux-armv7l-cpython-39/python/write.o -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -lgemmi_zlib -lgemmi_zlib -o build/lib.linux-armv7l-cpython-39/gemmi.cpython-39-arm-linux-gnueabihf.so -Wl,-s
2022-12-23T04:25:35,651   /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-12-23T04:25:35,651     warnings.warn(
2022-12-23T04:25:35,677   installing to build/bdist.linux-armv7l/wheel
2022-12-23T04:25:35,677   running install
2022-12-23T04:25:35,703   running install_lib
2022-12-23T04:25:35,729   creating build/bdist.linux-armv7l
2022-12-23T04:25:35,730   creating build/bdist.linux-armv7l/wheel
2022-12-23T04:25:35,731   copying build/lib.linux-armv7l-cpython-39/gemmi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2022-12-23T04:25:35,856   creating build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,857   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/multiproc.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,859   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/patterson_slice.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,861   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/rama_gather.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,863   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/hello.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,865   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/merge_mtz_mmcif.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,867   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/from_json.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,869   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/aafreq.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,870   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/col_order.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,872   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/maskdiff.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,874   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/maskcheck.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,876   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/weight.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,879   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/__init__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,880   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/ccd_subgraph.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,882   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/map2mtz.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,884   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/sub_ccd.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,886   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/simple_search.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,888   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/mtrix_iso.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,890   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/cif_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,892   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/ccd_gi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,894   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/long_geom.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,896   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/matthews.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,898   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/monomers.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,900   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/mtz_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,902   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/rama_plot.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,904   copying build/lib.linux-armv7l-cpython-39/gemmi-examples/__main__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples
2022-12-23T04:25:35,906   running install_egg_info
2022-12-23T04:25:35,974   running egg_info
2022-12-23T04:25:35,997   writing gemmi.egg-info/PKG-INFO
2022-12-23T04:25:36,000   writing dependency_links to gemmi.egg-info/dependency_links.txt
2022-12-23T04:25:36,002   writing top-level names to gemmi.egg-info/top_level.txt
2022-12-23T04:25:36,041   reading manifest file 'gemmi.egg-info/SOURCES.txt'
2022-12-23T04:25:36,092   reading manifest template 'MANIFEST.in'
2022-12-23T04:25:36,204   adding license file 'LICENSE.txt'
2022-12-23T04:25:36,224   writing manifest file 'gemmi.egg-info/SOURCES.txt'
2022-12-23T04:25:36,226   Copying gemmi.egg-info to build/bdist.linux-armv7l/wheel/gemmi-0.5.8-py3.9.egg-info
2022-12-23T04:25:36,238   running install_scripts
2022-12-23T04:25:36,311   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2022-12-23T04:25:36,317   creating build/bdist.linux-armv7l/wheel/gemmi-0.5.8.dist-info/WHEEL
2022-12-23T04:25:36,319   creating '/tmp/pip-wheel-9tqbr3f9/gemmi-0.5.8-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-12-23T04:25:37,520   adding 'gemmi.cpython-39-arm-linux-gnueabihf.so'
2022-12-23T04:25:37,564   adding 'gemmi-examples/__init__.py'
2022-12-23T04:25:37,565   adding 'gemmi-examples/__main__.py'
2022-12-23T04:25:37,566   adding 'gemmi-examples/aafreq.py'
2022-12-23T04:25:37,567   adding 'gemmi-examples/ccd_gi.py'
2022-12-23T04:25:37,568   adding 'gemmi-examples/ccd_subgraph.py'
2022-12-23T04:25:37,569   adding 'gemmi-examples/cif_i_sigi.py'
2022-12-23T04:25:37,571   adding 'gemmi-examples/col_order.py'
2022-12-23T04:25:37,572   adding 'gemmi-examples/from_json.py'
2022-12-23T04:25:37,573   adding 'gemmi-examples/hello.py'
2022-12-23T04:25:37,574   adding 'gemmi-examples/long_geom.py'
2022-12-23T04:25:37,575   adding 'gemmi-examples/map2mtz.py'
2022-12-23T04:25:37,576   adding 'gemmi-examples/maskcheck.py'
2022-12-23T04:25:37,578   adding 'gemmi-examples/maskdiff.py'
2022-12-23T04:25:37,579   adding 'gemmi-examples/matthews.py'
2022-12-23T04:25:37,581   adding 'gemmi-examples/merge_mtz_mmcif.py'
2022-12-23T04:25:37,582   adding 'gemmi-examples/monomers.py'
2022-12-23T04:25:37,583   adding 'gemmi-examples/mtrix_iso.py'
2022-12-23T04:25:37,584   adding 'gemmi-examples/mtz_i_sigi.py'
2022-12-23T04:25:37,585   adding 'gemmi-examples/multiproc.py'
2022-12-23T04:25:37,586   adding 'gemmi-examples/patterson_slice.py'
2022-12-23T04:25:37,588   adding 'gemmi-examples/rama_gather.py'
2022-12-23T04:25:37,589   adding 'gemmi-examples/rama_plot.py'
2022-12-23T04:25:37,590   adding 'gemmi-examples/simple_search.py'
2022-12-23T04:25:37,591   adding 'gemmi-examples/sub_ccd.py'
2022-12-23T04:25:37,592   adding 'gemmi-examples/weight.py'
2022-12-23T04:25:37,595   adding 'gemmi-0.5.8.dist-info/LICENSE.txt'
2022-12-23T04:25:37,596   adding 'gemmi-0.5.8.dist-info/METADATA'
2022-12-23T04:25:37,597   adding 'gemmi-0.5.8.dist-info/WHEEL'
2022-12-23T04:25:37,598   adding 'gemmi-0.5.8.dist-info/top_level.txt'
2022-12-23T04:25:37,599   adding 'gemmi-0.5.8.dist-info/RECORD'
2022-12-23T04:25:37,639   removing build/bdist.linux-armv7l/wheel
2022-12-23T04:25:37,803   Building wheel for gemmi (setup.py): finished with status 'done'
2022-12-23T04:25:37,836   Created wheel for gemmi: filename=gemmi-0.5.8-cp39-cp39-linux_armv7l.whl size=2586532 sha256=445bbb038f56a5b082944b8f3a593f7abe5161b7c9a52a32434c39866aeccbe2
2022-12-23T04:25:37,837   Stored in directory: /tmp/pip-ephem-wheel-cache-7vwzqi62/wheels/df/05/91/bedd1a3fdb59c844f316a50fd4a6ad3802cd52f0034ef48cd6
2022-12-23T04:25:37,851 Successfully built gemmi
2022-12-23T04:25:37,933 Removed build tracker: '/tmp/pip-build-tracker-hn8g2mn2'