2022-12-26T09:54:23,261 Created temporary directory: /tmp/pip-ephem-wheel-cache-_lxpqmpq
2022-12-26T09:54:23,263 Created temporary directory: /tmp/pip-build-tracker-6y0veoym
2022-12-26T09:54:23,264 Initialized build tracking at /tmp/pip-build-tracker-6y0veoym
2022-12-26T09:54:23,264 Created build tracker: /tmp/pip-build-tracker-6y0veoym
2022-12-26T09:54:23,264 Entered build tracker: /tmp/pip-build-tracker-6y0veoym
2022-12-26T09:54:23,264 Created temporary directory: /tmp/pip-wheel-kt0ko4f_
2022-12-26T09:54:23,268 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-26T09:54:23,270 Created temporary directory: /tmp/pip-ephem-wheel-cache-4gjza2bk
2022-12-26T09:54:23,301 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-26T09:54:23,304 2 location(s) to search for versions of fileformats-medimage:
2022-12-26T09:54:23,304 * https://pypi.org/simple/fileformats-medimage/
2022-12-26T09:54:23,304 * https://www.piwheels.org/simple/fileformats-medimage/
2022-12-26T09:54:23,305 Fetching project page and analyzing links: https://pypi.org/simple/fileformats-medimage/
2022-12-26T09:54:23,305 Getting page https://pypi.org/simple/fileformats-medimage/
2022-12-26T09:54:23,307 Found index url https://pypi.org/simple
2022-12-26T09:54:23,360 Fetched page https://pypi.org/simple/fileformats-medimage/ as application/vnd.pypi.simple.v1+json
2022-12-26T09:54:23,361   Found link https://files.pythonhosted.org/packages/7a/9b/47e9e09b729b3fa124b1c1e46c87e26054c77a2fa724721962b5df471531/fileformats-medimage-0.1.1.tar.gz (from https://pypi.org/simple/fileformats-medimage/) (requires-python:>=3.8), version: 0.1.1
2022-12-26T09:54:23,362   Skipping link: No binaries permitted for fileformats-medimage: https://files.pythonhosted.org/packages/b7/16/8b671149af2aeeddb6cf88c0f310e7f98bfbb1b9f2a47c5e274ab5f8b92d/fileformats_medimage-0.1.1-py3-none-any.whl (from https://pypi.org/simple/fileformats-medimage/) (requires-python:>=3.8)
2022-12-26T09:54:23,362 Fetching project page and analyzing links: https://www.piwheels.org/simple/fileformats-medimage/
2022-12-26T09:54:23,362 Getting page https://www.piwheels.org/simple/fileformats-medimage/
2022-12-26T09:54:23,363 Found index url https://www.piwheels.org/simple
2022-12-26T09:54:23,516 Fetched page https://www.piwheels.org/simple/fileformats-medimage/ as text/html
2022-12-26T09:54:23,517 Skipping link: not a file: https://www.piwheels.org/simple/fileformats-medimage/
2022-12-26T09:54:23,517 Skipping link: not a file: https://pypi.org/simple/fileformats-medimage/
2022-12-26T09:54:23,536 Given no hashes to check 1 links for project 'fileformats-medimage': discarding no candidates
2022-12-26T09:54:23,553 Collecting fileformats-medimage==0.1.1
2022-12-26T09:54:23,555   Created temporary directory: /tmp/pip-unpack-1cw06h_x
2022-12-26T09:54:23,742   Downloading fileformats-medimage-0.1.1.tar.gz (13 kB)
2022-12-26T09:54:23,779   Added fileformats-medimage==0.1.1 from https://files.pythonhosted.org/packages/7a/9b/47e9e09b729b3fa124b1c1e46c87e26054c77a2fa724721962b5df471531/fileformats-medimage-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-6y0veoym'
2022-12-26T09:54:23,784   Created temporary directory: /tmp/pip-build-env-m480h1lp
2022-12-26T09:54:23,791   Installing build dependencies: started
2022-12-26T09:54:23,793   Running command pip subprocess to install build dependencies
2022-12-26T09:54:24,979   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-12-26T09:54:25,364   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-26T09:54:25,389   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-26T09:54:26,036   Collecting flit_scm
2022-12-26T09:54:26,090     Using cached https://www.piwheels.org/simple/flit-scm/flit_scm-1.7.0-py3-none-any.whl (3.0 kB)
2022-12-26T09:54:26,222   Collecting tomli
2022-12-26T09:54:26,239     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2022-12-26T09:54:26,501   Collecting flit-core~=3.5
2022-12-26T09:54:26,560     Using cached https://www.piwheels.org/simple/flit-core/flit_core-3.8.0-py3-none-any.whl (62 kB)
2022-12-26T09:54:26,904   Collecting setuptools_scm>=6.4
2022-12-26T09:54:26,961     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB)
2022-12-26T09:54:27,122   Collecting typing-extensions
2022-12-26T09:54:27,140     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB)
2022-12-26T09:54:27,356   Collecting packaging>=20.0
2022-12-26T09:54:27,386     Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB)
2022-12-26T09:54:28,758   Collecting setuptools
2022-12-26T09:54:28,887     Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB)
2022-12-26T09:54:30,942   Installing collected packages: typing-extensions, tomli, setuptools, packaging, flit-core, setuptools_scm, flit_scm
2022-12-26T09:54:34,335   Successfully installed flit-core-3.8.0 flit_scm-1.7.0 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0

2022-12-26T09:54:34,351   [notice] A new release of pip available: 22.3 -> 22.3.1
2022-12-26T09:54:34,351   [notice] To update, run: python3 -m pip install --upgrade pip
2022-12-26T09:54:34,633   Installing build dependencies: finished with status 'done'
2022-12-26T09:54:34,638   Getting requirements to build wheel: started
2022-12-26T09:54:34,639   Running command Getting requirements to build wheel
2022-12-26T09:54:35,066   Getting requirements to build wheel: finished with status 'done'
2022-12-26T09:54:35,178   Installing backend dependencies: started
2022-12-26T09:54:35,179   Running command pip subprocess to install backend dependencies
2022-12-26T09:54:36,367   Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2022-12-26T09:54:36,774   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-12-26T09:54:36,799   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-12-26T09:54:37,266   Collecting fileformats-core>=0.1
2022-12-26T09:54:37,297     Downloading https://www.piwheels.org/simple/fileformats-core/fileformats_core-0.1.0-py3-none-any.whl (20 kB)
2022-12-26T09:54:37,609   Collecting pydicom>=2.3.0
2022-12-26T09:54:37,657     Downloading https://www.piwheels.org/simple/pydicom/pydicom-2.3.1-py3-none-any.whl (2.0 MB)
2022-12-26T09:54:37,890        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.0/2.0 MB 8.8 MB/s eta 0:00:00
2022-12-26T09:54:38,153   Collecting pydra-mrtrix3>=0.2
2022-12-26T09:54:38,199     Downloading https://www.piwheels.org/simple/pydra-mrtrix3/pydra_mrtrix3-0.2-py3-none-any.whl (6.7 kB)
2022-12-26T09:54:38,908   Collecting jq>=1.2.2
2022-12-26T09:54:38,990     Downloading https://www.piwheels.org/simple/jq/jq-1.3.0-cp39-cp39-linux_armv7l.whl (537 kB)
2022-12-26T09:54:39,079        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 537.8/537.8 kB 6.7 MB/s eta 0:00:00
2022-12-26T09:54:39,162     Link requires a different Python (3.9.2 not in: '!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7'): https://files.pythonhosted.org/packages/7a/4e/6ba3b19108bb4a67848e922975583fd96dc4f67766d18ab630d03ed105e2/nibabel-2.5.2-py3-none-any.whl (from https://pypi.org/simple/nibabel/) (requires-python:!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7)
2022-12-26T09:54:39,164     Link requires a different Python (3.9.2 not in: '!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7'): https://files.pythonhosted.org/packages/16/53/258afe4a2415e35a78ea0800e98498922b17de9d03c394f5d60f28ba3eaf/nibabel-2.5.2.tar.gz (from https://pypi.org/simple/nibabel/) (requires-python:!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7)
2022-12-26T09:54:39,252     Link requires a different Python (3.9.2 not in: '!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7'): https://www.piwheels.org/simple/nibabel/nibabel-2.5.2-py3-none-any.whl#sha256=741c5eb02165402fb47fe69e6416e8f50190dfc0ddcfd68094cfe1ffbe3c0d9b (from https://www.piwheels.org/simple/nibabel/) (requires-python:!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,<3.9dev,>=2.7)
2022-12-26T09:54:39,294   Collecting nibabel>=4.0.2
2022-12-26T09:54:39,320     Downloading https://www.piwheels.org/simple/nibabel/nibabel-4.0.2-py3-none-any.whl (3.3 MB)
2022-12-26T09:54:39,672        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.3/3.3 MB 9.7 MB/s eta 0:00:00
2022-12-26T09:54:39,972   Collecting pydra-dcm2niix>=1.2.0
2022-12-26T09:54:40,000     Downloading https://www.piwheels.org/simple/pydra-dcm2niix/pydra_dcm2niix-1.2.0-py3-none-any.whl (7.5 kB)
2022-12-26T09:54:40,226   Collecting fileformats-common>=0.1.1
2022-12-26T09:54:40,252     Downloading https://www.piwheels.org/simple/fileformats-common/fileformats_common-0.1.1-py3-none-any.whl (12 kB)
2022-12-26T09:54:41,482   Collecting numpy>=1.22.3
2022-12-26T09:54:42,626     Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.0-cp39-cp39-linux_armv7l.whl (12.3 MB)
2022-12-26T09:54:43,341   Collecting pydra>=0.20.0
2022-12-26T09:54:44,397     Using cached https://www.piwheels.org/simple/pydra/pydra-0.21-py3-none-any.whl (10.6 MB)
2022-12-26T09:54:44,861   Collecting attrs>=22.1.0
2022-12-26T09:54:44,904     Using cached https://www.piwheels.org/simple/attrs/attrs-22.2.0-py3-none-any.whl (60 kB)
2022-12-26T09:54:45,421   Collecting packaging>=17.0
2022-12-26T09:54:45,440     Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB)
2022-12-26T09:54:46,896   Collecting setuptools
2022-12-26T09:54:47,029     Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB)
2022-12-26T09:54:47,707   Collecting etelemetry>=0.2.2
2022-12-26T09:54:47,715     Using cached etelemetry-0.3.0-py3-none-any.whl (6.3 kB)
2022-12-26T09:54:47,872   Collecting cloudpickle>=2.0.0
2022-12-26T09:54:47,929     Using cached https://www.piwheels.org/simple/cloudpickle/cloudpickle-2.2.0-py3-none-any.whl (25 kB)
2022-12-26T09:54:48,130   Collecting filelock>=3.0.0
2022-12-26T09:54:48,159     Using cached https://www.piwheels.org/simple/filelock/filelock-3.8.2-py3-none-any.whl (10 kB)
2022-12-26T09:54:48,484   Collecting requests
2022-12-26T09:54:48,519     Using cached https://www.piwheels.org/simple/requests/requests-2.28.1-py3-none-any.whl (62 kB)
2022-12-26T09:54:48,697   Collecting ci-info>=0.2
2022-12-26T09:54:48,718     Using cached ci_info-0.3.0-py3-none-any.whl (7.8 kB)
2022-12-26T09:54:48,986   Collecting certifi>=2017.4.17
2022-12-26T09:54:49,026     Using cached https://www.piwheels.org/simple/certifi/certifi-2022.12.7-py3-none-any.whl (155 kB)
2022-12-26T09:54:49,179   Collecting idna<4,>=2.5
2022-12-26T09:54:49,199     Using cached https://www.piwheels.org/simple/idna/idna-3.4-py3-none-any.whl (61 kB)
2022-12-26T09:54:49,593   Collecting charset-normalizer<3,>=2
2022-12-26T09:54:49,615     Using cached https://www.piwheels.org/simple/charset-normalizer/charset_normalizer-2.1.1-py3-none-any.whl (39 kB)
2022-12-26T09:54:49,913   Collecting urllib3<1.27,>=1.21.1
2022-12-26T09:54:49,972     Using cached https://www.piwheels.org/simple/urllib3/urllib3-1.26.13-py2.py3-none-any.whl (140 kB)
2022-12-26T09:54:52,937   Installing collected packages: urllib3, setuptools, pydicom, packaging, numpy, jq, idna, filelock, cloudpickle, ci-info, charset-normalizer, certifi, attrs, requests, nibabel, etelemetry, pydra, pydra-mrtrix3, pydra-dcm2niix, fileformats-core, fileformats-common
2022-12-26T09:54:59,888     Creating /tmp/pip-build-env-m480h1lp/normal/bin
2022-12-26T09:54:59,890     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/pydicom to 755
2022-12-26T09:55:08,736     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/f2py to 755
2022-12-26T09:55:08,738     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/f2py3 to 755
2022-12-26T09:55:08,740     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/f2py3.9 to 755
2022-12-26T09:55:09,504     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/normalizer to 755
2022-12-26T09:55:13,644     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-conform to 755
2022-12-26T09:55:13,647     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-convert to 755
2022-12-26T09:55:13,649     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-dicomfs to 755
2022-12-26T09:55:13,651     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-diff to 755
2022-12-26T09:55:13,653     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-ls to 755
2022-12-26T09:55:13,656     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-nifti-dx to 755
2022-12-26T09:55:13,658     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-roi to 755
2022-12-26T09:55:13,660     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-stats to 755
2022-12-26T09:55:13,662     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-tck2trk to 755
2022-12-26T09:55:13,665     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/nib-trk2tck to 755
2022-12-26T09:55:13,667     changing mode of /tmp/pip-build-env-m480h1lp/normal/bin/parrec2nii to 755
2022-12-26T09:55:15,163   Successfully installed attrs-22.2.0 certifi-2022.12.7 charset-normalizer-2.1.1 ci-info-0.3.0 cloudpickle-2.2.0 etelemetry-0.3.0 fileformats-common-0.1.1 fileformats-core-0.1.0 filelock-3.8.2 idna-3.4 jq-1.3.0 nibabel-4.0.2 numpy-1.24.0 packaging-22.0 pydicom-2.3.1 pydra-0.21 pydra-dcm2niix-1.2.0 pydra-mrtrix3-0.2 requests-2.28.1 setuptools-65.6.3 urllib3-1.26.13

2022-12-26T09:55:15,177   [notice] A new release of pip available: 22.3 -> 22.3.1
2022-12-26T09:55:15,177   [notice] To update, run: python3 -m pip install --upgrade pip
2022-12-26T09:55:15,611   Installing backend dependencies: finished with status 'done'
2022-12-26T09:55:15,614   Created temporary directory: /tmp/pip-modern-metadata-uz85p3x4
2022-12-26T09:55:15,617   Preparing metadata (pyproject.toml): started
2022-12-26T09:55:15,618   Running command Preparing metadata (pyproject.toml)
2022-12-26T09:55:17,481   Preparing metadata (pyproject.toml): finished with status 'done'
2022-12-26T09:55:17,489   Source in /tmp/pip-wheel-kt0ko4f_/fileformats-medimage_ecbeb58bcc5e48f9a3f1b17c33f6ab0b has version 0.1.1, which satisfies requirement fileformats-medimage==0.1.1 from https://files.pythonhosted.org/packages/7a/9b/47e9e09b729b3fa124b1c1e46c87e26054c77a2fa724721962b5df471531/fileformats-medimage-0.1.1.tar.gz
2022-12-26T09:55:17,490   Removed fileformats-medimage==0.1.1 from https://files.pythonhosted.org/packages/7a/9b/47e9e09b729b3fa124b1c1e46c87e26054c77a2fa724721962b5df471531/fileformats-medimage-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-6y0veoym'
2022-12-26T09:55:17,497 Created temporary directory: /tmp/pip-unpack-zouhpcqj
2022-12-26T09:55:17,497 Building wheels for collected packages: fileformats-medimage
2022-12-26T09:55:17,502   Created temporary directory: /tmp/pip-wheel-68p8ogx4
2022-12-26T09:55:17,503   Destination directory: /tmp/pip-wheel-68p8ogx4
2022-12-26T09:55:17,505   Building wheel for fileformats-medimage (pyproject.toml): started
2022-12-26T09:55:17,506   Running command Building wheel for fileformats-medimage (pyproject.toml)
2022-12-26T09:55:19,142   Building wheel for fileformats-medimage (pyproject.toml): finished with status 'done'
2022-12-26T09:55:19,148   Created wheel for fileformats-medimage: filename=fileformats_medimage-0.1.1-py3-none-any.whl size=14632 sha256=70ea720bedf55634ccaa4908b97daa085e52b6837660cfaeb4424c35bbd28545
2022-12-26T09:55:19,149   Stored in directory: /tmp/pip-ephem-wheel-cache-4gjza2bk/wheels/f1/79/ea/508191895de2a4978faab8d6590c64a4d1987cf002759672ee
2022-12-26T09:55:19,162 Successfully built fileformats-medimage
2022-12-26T09:55:19,166 Removed build tracker: '/tmp/pip-build-tracker-6y0veoym'