2022-12-29T03:32:24,622 Created temporary directory: /tmp/pip-ephem-wheel-cache-woql9c39 2022-12-29T03:32:24,624 Created temporary directory: /tmp/pip-build-tracker-ysymv98r 2022-12-29T03:32:24,625 Initialized build tracking at /tmp/pip-build-tracker-ysymv98r 2022-12-29T03:32:24,625 Created build tracker: /tmp/pip-build-tracker-ysymv98r 2022-12-29T03:32:24,625 Entered build tracker: /tmp/pip-build-tracker-ysymv98r 2022-12-29T03:32:24,625 Created temporary directory: /tmp/pip-wheel-0gfw98dg 2022-12-29T03:32:24,629 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T03:32:24,631 Created temporary directory: /tmp/pip-ephem-wheel-cache-n0a9h40u 2022-12-29T03:32:24,659 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T03:32:24,662 2 location(s) to search for versions of trisicell: 2022-12-29T03:32:24,662 * https://pypi.org/simple/trisicell/ 2022-12-29T03:32:24,662 * https://www.piwheels.org/simple/trisicell/ 2022-12-29T03:32:24,663 Fetching project page and analyzing links: https://pypi.org/simple/trisicell/ 2022-12-29T03:32:24,663 Getting page https://pypi.org/simple/trisicell/ 2022-12-29T03:32:24,665 Found index url https://pypi.org/simple 2022-12-29T03:32:24,722 Fetched page https://pypi.org/simple/trisicell/ as application/vnd.pypi.simple.v1+json 2022-12-29T03:32:24,760 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/b8/2950fd2454a806fc4e752550f3a1e904c28b64cd00b2e3ee256347d0bf3e/trisicell-0.0.1-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,761 Found link https://files.pythonhosted.org/packages/0f/77/31db547e742846df730f8781d49cc48ff7bd57e693f72b0395d30a6829c3/trisicell-0.0.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.1 2022-12-29T03:32:24,761 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fa/b2/6fb0a205be456eb6fbcfc6c5b083c4f6d956632c21a34ffaa18b36c9fe76/trisicell-0.0.2-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,762 Found link https://files.pythonhosted.org/packages/ce/b5/21b4e3824519dc1a88b1739b340f38af88b62eecfc9b5aa9cd7677df48a9/trisicell-0.0.2.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.2 2022-12-29T03:32:24,762 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/86/35/557a32884b5081d4645717d2d73bda6c75f7fde6f4f7511d74a7323a8a3e/trisicell-0.0.3-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,762 Found link https://files.pythonhosted.org/packages/fe/42/67954c24d7ff4c671b56f453c80b4e16802763c1d6995ff92afb7fd31218/trisicell-0.0.3.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.3 2022-12-29T03:32:24,763 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/43/f2/e79dcc28e0095e1c808c1250cd9c6878a025ed842cb2f552099dfc0e75e1/trisicell-0.0.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,763 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e1/6b/2cde12b1c4a1e4e4c700fe1cb6381bfa45fd88dcaff9a8a11a466499d3a4/trisicell-0.0.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,763 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/52/77/f576fe4f1d51a1c25a0b48fca809994e32ba23fc97cdf7d46bce3d25a753/trisicell-0.0.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,763 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5e/4d/9c8b5d9e3b215cc96eedc5e26653435d9b3672c6cfb550d4bb2c00d7b356/trisicell-0.0.7-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,764 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f6/14/06ed20f29289c004db1b2199ff3d16f6af748015fe9ea2f7359cfb15a77d/trisicell-0.0.8-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,764 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/31/2ba8d94d342b4ae52a741c024748302eaa5470e8016d6229ae8d70303805/trisicell-0.0.9-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,764 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/95/4a/2f93780b7f99a6d374aaf6e2683c88ae2816664461694bb1053a02d8ab2d/trisicell-0.0.10-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,764 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/c8/3955d678890b02ce13119cbfbd8845d0b4697f8011c049c4708f77c217fa/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,764 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/15/fc/8c9ccb70b5bc5f772bf1ed47fb5a69f57c9366c3080eb51bc1ffe179395c/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,765 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/37/40a4dc368c6c9fe0e5322ef68de70fe2f82052acd7c4f86e78809b204d9d/trisicell-0.0.10-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,765 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/ce/21f6ba6ea18fe75c6bdc3bdef8b738e9e38d8410f97acecc31f1c34a1ea6/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,765 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b3/88/2818eaaefda0fe41d7d9244c3baa10826c2a816b61853c35b76c2ea0cf08/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,765 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3d/54/dd8fd80a1519d5d2b61be06976dc83ecb4a313c67222784979b4dd4562a3/trisicell-0.0.10-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,765 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d0/f7/71587b93fd9a862b23b593d68981164c462cbc171e8f83396694a69f66ad/trisicell-0.0.10-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,766 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e6/e3/4d22c1afbf3984957aa19ff3d552e0daa89c560a48b12691d12600efd7e6/trisicell-0.0.10-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,766 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f4/57/dc75865dfa7f68ce1ecc5da762ea64e716c2992ee3c091ae049c0afbab76/trisicell-0.0.10-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,766 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/5c/25cb5b003df9264665bf20eab56e654f35a5352f581e54d2fee83c85a0e8/trisicell-0.0.10-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,766 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b5/ac/1ffd83c0cdb49aae3e2407de9b988b11ab36fda097faf5cf33ac21649812/trisicell-0.0.10-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,766 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/af/dbdafefd2bd2ae816e1945b9195b30c0c54785f8122fc9d664531b590e7c/trisicell-0.0.10-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,767 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/96/41/2b2b17f0b7bb66ababb403d1132a69115e1d25357f20e388b66d1b4a84dd/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,767 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9b/7f/5cac564f5e251b071fa271e4c0549c8b001ddd1a31fd7ab3bd319c55e429/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,767 Found link https://files.pythonhosted.org/packages/be/35/77379d91c1ed8566f2692c3086936d1eec091a6ee37244e152e2d31e3d5c/trisicell-0.0.10.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.10 2022-12-29T03:32:24,768 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/39/9b/c6f63cfede491173af4570a3a8adb0b23e5db82963b3b3a49a12096e8727/trisicell-0.0.11-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,768 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/4b/ff3d54872b512626d17e9e1309e53a78ecc0dcfdae338372501bb974348a/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,768 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/25/9d/e6175c0845bf72aee1d3a871f99fd0512df522d2076714c1271db43b1a98/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,768 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/91/37/b6772ee6c1913db7797b17dfe25b925f664f23c964c17d5386cad2e15974/trisicell-0.0.11-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,769 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f3/14/6bc32344227b4b18a9e4e4f46d705e81c89c21d33be921845b407581d8f1/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,769 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1b/3c/0ba95413a931207f805fb98c773ad42df37ef563b4303b53e674f81da3ae/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,769 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/eb/2a/a163038e304553b5a43b7532fe6093486d48eada442e7efdc944b67b8cb6/trisicell-0.0.11.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.11 2022-12-29T03:32:24,771 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/4f/3fb4123f6e54a0e55759cd13a3ac5bad7329e0f12db6e1fefd5df5c50c02/trisicell-0.0.12-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,772 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b1/ef/fc937cc8002bdb83627ee72d573aaeadd0c1fdd3193f7d975acd022d51c6/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,772 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/31/1f/6be51d3dbe2fc8c8bebcf9d3ef65bbc0eb032e2a6cae295d8b6ba90765c7/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,772 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/a1/cbecb821708867f74b50850da19a73c6bd5f76ba9515e3c438f46dcba55a/trisicell-0.0.12-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,772 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/e5/c4c150f5efca3f50a7616e13264b54646b3ffa33814c7aa3600ebceae4d1/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,772 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/2d/55edfcefb69b65b51fda5bcc4f35dff8e3d3bc9b635d06db52ebc5de0285/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,773 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0f/56/1b51c8351499be210b2796341f52d6df8775993dc52f306403d734a295b8/trisicell-0.0.12-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,773 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/f8/d4bf1c3bc2d61c0fdf4517ee957710c901fb76185db17e971c0861bda284/trisicell-0.0.12-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,773 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1c/7c/faccfe894e56285406078ebc6b41aec43dc494813c28382277355bf9ee24/trisicell-0.0.12-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,773 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/dc/c3/6d40f602bf437f538e88dff4b954c4d68c2bce613e0ec7317afdc816ebd8/trisicell-0.0.12-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,773 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/f4/bd2b84a751e40c872e238094e51469feb02657fa518236a45793dd782d8e/trisicell-0.0.12-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,774 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/2c/17e9aed816b843dbdc618f82f319b4f8f0e7eb6314f379fb041afab061b3/trisicell-0.0.12-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,774 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/c5/e45f81f8e73901115c192f3fe34b5cae11ed6ab3d39e51153780b2a180e0/trisicell-0.0.12-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,774 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e0/88/82561e771a63dcfdecbb2b53c03ad596a906d678dac3a191a16688f9c0af/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,774 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3a/7b/e9826627d69511e5882ca953a9e4a59a41802c6fe996f6e4da7804051962/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,775 Found link https://files.pythonhosted.org/packages/c7/e1/ade053876eb2b0fdb9ef2a4f42f18b2403471a9b26cf899cba463043bdb7/trisicell-0.0.12.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.12 2022-12-29T03:32:24,775 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ab/e5/6fd6cbb639907d603cfdaa19ee4302399dd6cc8ab1132b9f7ca1cbf8ebdf/trisicell-0.0.13-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,775 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/ef/1c/413c65088f586d97b3dafaad37e64223a31f0ca44ff1dd6ae98db6b92baf/trisicell-0.0.14-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,779 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/48/95/2976bc1892dcefadbef6ac9f3f57e8038b5d42b3253e3af527e4c1fcb9b6/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,779 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/39/aa9dbdafcb926cbcbc3533d9084381508992d8d5de95e1e02187aae32286/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,779 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/96/b4/2315f07e590ed7dd0c489a4a7ed0b101099192629a2ec3ae2b937cab0918/trisicell-0.0.14.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.14 2022-12-29T03:32:24,782 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/af/08/cb80b06db6765ecad6479ed30e8ecf9159bbf3778dedb614fc0846dda264/trisicell-0.0.15-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,782 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/33/03a174d81c58e8a719888629de16b89e8b365b2d030beab5306538e4de49/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,783 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/b9/698c67ae9194ebb50148963fdc2740ad07e8b9775ffa49a2c2f77186cf19/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,783 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/3e/c41835cb89d53b4952552796cc5f2827c6950f6c3934e8d648e3f1ff5605/trisicell-0.0.15-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,783 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/26/f4/42172fde474a5dcce1a06e9be79fcdfa9e28229289e1b67403159894ea9e/trisicell-0.0.15-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,783 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/c7/98/1ebae14aa5be3b1c97aff53a647c7d3c210129a00058c8c53ccaefcd8554/trisicell-0.0.15-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,784 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/49/30/7043332c770a9ea0f6de404ff7207997eb63e9235bc3d94df875adec6275/trisicell-0.0.15-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,784 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5d/01/927e0e5d3f799adefe2eef3958d188c1d5fb64e9985b3ec61d6f25ee1887/trisicell-0.0.15-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,784 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/68/60/32ab36da479a3a5dbe3fed6940cbcb04ec2a37821cf74bc888ef8b83bd74/trisicell-0.0.15-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,785 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0d/5b/e0fed4825a2ca741be71ee2abbb993e33a91ea56319d04b474392b1ab310/trisicell-0.0.15-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,785 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/56/19/162c9241acabd2705cc5c2cc9ba6291ce71add4cda2286ed08f31d6d93d3/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,785 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/74/e59316d78a645710e28f41a0a286d4d712b517bf64a01bb543d40b9c67e7/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,786 Found link https://files.pythonhosted.org/packages/09/51/b71422ae4bfc6904bc6197b9a0ba7b00873719306e27f8d549ea713a2eb4/trisicell-0.0.15.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.15 2022-12-29T03:32:24,786 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ba/ef/b141bb5e6beaf5d3f40aa0f47e5f58c4a3616f26f6b439d416c4a22c71e6/trisicell-0.0.17-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,786 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ce/bb/a84f280257973126cabf750f512aad66408f3ffc8eda178900d687902160/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,786 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d9/8b/26e7b6fe7c9f0a801b9560f64ffa9d281bcb38252ca1e56df50c1fd34c8b/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,786 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/47/d2/61987600a45df1b54af4c54b6c6ee808f9178103bbde24d89003378e6bb4/trisicell-0.0.17-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,787 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f9/0a/79294e867f4db48e0b382c39fb76360b77ec467eff09de99e7b772aedb7a/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,787 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/c6/670c6154db038cf35e6e1ced5ebce4dcdc3b8a47103d042becde5b63bc78/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,787 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/8b/7f/8c576ba6a21ff37ea84af2dd20e47edf0965dd82dfd88ee3717071d25dad/trisicell-0.0.17-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,787 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/d5/3e/b4d8e5e2b1ab9d81c0b9e09ace7cf2e822b2aad41824555c57255c331c37/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,789 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fe/5b/281df62e3fd3a2427e173491695f1e53c86fc342c0af967025f6c497f5a0/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,789 Found link https://files.pythonhosted.org/packages/8f/50/417a46ad6591aba07b8fbe81b15cae4dd35343d3524c2a150c824124b501/trisicell-0.0.17.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.17 2022-12-29T03:32:24,789 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/29/4e/5d083ebef8d7a8a73abc2991bc4f941b90faf5ab0e3bf1e45a8163a86473/trisicell-0.0.18-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,790 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/c1/52e9474e3f93bcf3424676c74c0844502cf2a4c52fdf36e6c746b9a1b3db/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,790 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/bc/84692f18c164186b3b3c5f4c095ee289d6252d4c4253c188aa153c5514d1/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,790 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/1e/1e/46b6dd9d3dfa063b03fe440d8419bb254ba347b9d6a6ed62036e21e70019/trisicell-0.0.18.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.18 2022-12-29T03:32:24,793 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/4f/d93614ac82e5b5edb63a95e8c9e75c98dea3ee346acaf16618f199f3301b/trisicell-0.0.19-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,793 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/89/cf976eb9b0ca028734e266cb632aa99170bcf964f1de41067c6051ede1ad/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,793 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/01/7e365bc970805f0112341d214e9ceb6c3730ea123f466189cbe7282d0b08/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,794 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/ff/f430af3b04d9850bb3c4676740bb8c0d12cd88e91aa97e78f5801ee30105/trisicell-0.0.19-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,794 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/22/7730486ef2001bbf8dd62950dc964176ca7c176f43ca790b652ad0d4e747/trisicell-0.0.19-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,794 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/92/32/a9558d6f6a9291e6cd95172849256e14c9997eb4ad60a82eb95615a5cdec/trisicell-0.0.19-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,795 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/eb/64/612915a71230c697a44a8835e1ddbad0ddfedfc882acbe5308570b727acb/trisicell-0.0.19-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,795 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2e/36/08d36f74261352be966a34ccb39f6fd23f4eb5fdbad3bdb5597226ed8f87/trisicell-0.0.19-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,795 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/79/279867ef139fa30bccb78f170ccdec30beebfb9746c7b5618fba1dd853b0/trisicell-0.0.19-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,795 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/72/d2/6460afb8eb78ac836faa1dfb4968dbd6fb28fe95c964ef3467e8b2da31ba/trisicell-0.0.19-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,796 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/00/8aee47eed339815441421aa74c44ffd9656cf6eb3644a4b6049fd2f154b9/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,796 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ae/50/e671e71bda08d505e833d3b3257ca5ad0843365908660ee2f853e8de28b7/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,796 Found link https://files.pythonhosted.org/packages/7f/8a/b21a4b088399b772c0d96379d71aec538e74da32131cf383c8903ca4b587/trisicell-0.0.19.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.19 2022-12-29T03:32:24,797 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/0e/f7622188c509b0bb7e8518b3a641c71c42d6c920dfa21d8a6f8d02668d9b/trisicell-0.0.20-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,797 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/85/ae/6a8a9c4b00b76c56ed29cad1bc15d6ad0579db4641dd0e3bed94e4af4f47/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,797 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/bc/d5/f537f767ef0d300a60c99917b2a126e5c6e26fcc1a2f57a538ab98d5c1e7/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,797 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/78/cc/d561d90e65c511fab3fb83c568c2a7435de0a795384e596b616d1ad2c456/trisicell-0.0.20-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,797 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/90/63/239bd4268a11e41aca96d5bee3a8d1f11a00a2d8f33e985a0bb16ee4c5a3/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,798 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4b/ca/bfac2fbaa3d2d4d094c015c9e590ce8032a11973b62dd176e439c2ee8ce8/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,798 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9c/cd/a811ef434301ef4af12de370f4a8af22d99b64b84cb62cbb7613584f1043/trisicell-0.0.20-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,798 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/40/17/b3abf3ab533d0bf6fd93bfd02ae9a55a7a4b5b19eb3f47069ed938b91697/trisicell-0.0.20-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,798 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/47/57725061d474ac4e36ca25ad288060de1da9910b156e0ad325602e9c6b0e/trisicell-0.0.20-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,798 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ca/06/247d875e24eda93a9ba980b2712e8af71cb7b6b99627a35cf4f872087af7/trisicell-0.0.20-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,799 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/50/a0e1fe6bff27cdfc657b06ca51df5260f7b64c490251a85cf1fcb02d561a/trisicell-0.0.20-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,799 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6e/24/e0d9527cf63ef663dd39cb05add63e511267697e45e73d086bdbf6020512/trisicell-0.0.20-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,799 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2f/93/fe11b90918a4209cddf61733e2c7045280a75a361d8030bb42f6822c1847/trisicell-0.0.20-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,799 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/fa/0cf1cbaabd9df2848cdc43014f875221f556bb10ccf96bc33032df736f0e/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,799 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/e9/0a905a07667b2b284273601fe852ccd5098d7afa280e5f800d0488bba2e9/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,800 Found link https://files.pythonhosted.org/packages/80/8f/5cd6e2543aa53fe39919c80fd76173bdb37cb178699120546b316119f78b/trisicell-0.0.20.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.20 2022-12-29T03:32:24,800 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/33/49/a197eaa50f21fe8410cdc124c190335e7be5ff686492601eb1f7261c7979/trisicell-0.0.21-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,801 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f8/97/570fd2f9a575ab00909f9664487b62843e31372b9733aa367e2186649554/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,801 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/b4/8a70a28c33fb18dd391ad89993da456cf5e652bd0bb29b20b8809c3f8736/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,801 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/6f/31/1d023987313bb9c3b7a7785ba8299b6a36690c6b2d4b98f7d6776966792e/trisicell-0.1.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,805 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/aa/31/f195be4c965b060b300976551c862a285340db7e62666d0e387d186b7dde/trisicell-0.1.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,805 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b9/8c/f89f7913badc6a73423493bdb76178aec8c72f889239f26ecefb43a8736a/trisicell-0.1.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,805 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/eb/1c/4c10230ff77851d054f097723acdf4a66e132aa736cc3c705a727ec6f9e2/trisicell-0.1.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,806 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c4/d3/1bcddcfd3ce3c43ff0fb1b8a433f74f3fecf1c3715b788b6abfebc1086e3/trisicell-0.1.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,806 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/ac/56179f89ddd9c3cf3fc6849ffdcb5f35d78de76c840a740dc3511109d985/trisicell-0.1.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,806 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/30/6f/bf5be03efc652f74b1f8524ff18d89cdf29e6164e2f07c4730ae68929558/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,806 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/69/e02ad86d1b69212c45eaa10f4d92dffaa8f46d26344a144b21eb00b71a7c/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,807 Found link https://files.pythonhosted.org/packages/66/f0/febc83c6d3ec0b2581b3da2cad09e7aecb4b9c9ef4c514269533d2e24f3d/trisicell-0.1.0.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.1.0 2022-12-29T03:32:24,807 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/76/2e/df06101e7c596b39f42efbc2d883c52ef8c069c4236616b5ffaca4fbc51b/trisicell-0.1.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,808 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4f/f1/1d576151435b04fe1a59e8160b7230a2eeb7c01af7467d0cf6966a2030bc/trisicell-0.1.1-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,808 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/92/f6/58b3e0d2117892fe478bafbe307f45ba525bbcfd4af222aa2ee23dc7e1b6/trisicell-0.1.1-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,808 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/43/da/ac554aa98e6d36949e35dba0b080b80d216884802c5955af2ab96035270d/trisicell-0.1.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,808 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a9/99/c501629fc32ffe0cc6721a109a91698673642c8917f77d47876c082a6536/trisicell-0.1.1-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,808 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/42/870d340609b3ec20bb6029f2e825a6fa4619a1f074b05fbafe785cd5b0c8/trisicell-0.1.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/92/4d/812df4542f6d9bb64e3f6229efe41283c1e47c2c09099cb5b951c45224b1/trisicell-0.1.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4e/bd/a4d65bdf6e6fd9fea41b00263505d0e4709f2afa8ce4c13f6d69ffa551f2/trisicell-0.1.1-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/25/0c/2b5257c91af04bc2ff9f7c8c769a31a4ba37d872ab832b011c91330795ce/trisicell-0.1.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f5/69/4e2c1069f4176c48abc5452fa946b7edec6e71bc27975a95fc97f52d983c/trisicell-0.1.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a0/33/9e5fca7b580212cd645f02095495644af01d68bf4b28c02a599ef79e2e58/trisicell-0.1.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,809 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/24/37/13e115551b6163b6f7290c9b54a20fbaff16a16576d58d52491c5029198e/trisicell-0.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,810 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d2/d7/a0a7661f69170b4390eac40c9cf532d626aa6db5244b0b476a044e84a8c1/trisicell-0.1.1-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,810 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ab/3a/7fb66a4fce38ef92bbd3dfde25022cfd261cb7180df928eaaf7093be9d08/trisicell-0.1.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,810 Found link https://files.pythonhosted.org/packages/c1/0e/42a8f71f25e956bed0fe923528bc174c2f3410bec48c5e9de48d4d1b8239/trisicell-0.1.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.1.1 2022-12-29T03:32:24,811 Fetching project page and analyzing links: https://www.piwheels.org/simple/trisicell/ 2022-12-29T03:32:24,811 Getting page https://www.piwheels.org/simple/trisicell/ 2022-12-29T03:32:24,812 Found index url https://www.piwheels.org/simple 2022-12-29T03:32:24,970 Fetched page https://www.piwheels.org/simple/trisicell/ as text/html 2022-12-29T03:32:24,979 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=e74653a1ef66937894f29971b74a1cc1d70045d234acd164911bcec67e2952e8 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,979 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=e74653a1ef66937894f29971b74a1cc1d70045d234acd164911bcec67e2952e8 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,980 Skipping link: No binaries permitted for trisicell: 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https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv7l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,984 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv6l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,984 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv7l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,984 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv6l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,984 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv7l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,984 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv6l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,985 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.3-py3-none-any.whl#sha256=1673dfd550aa8b6f6fbb7ab02f404f6bc0cbc9c8ef6350da9101e756f50d1172 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,985 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.2-py3-none-any.whl#sha256=90e36d6a009270d45a57c8519ffaebd1c79ba4037d2f68abf2d17af9263fcd38 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,985 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.1-py3-none-any.whl#sha256=9bd9a3c4d1224294fe104ca92f349bd257ccb36c21f2210f4fbedb000b0736fc (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2022-12-29T03:32:24,985 Skipping link: not a file: https://www.piwheels.org/simple/trisicell/ 2022-12-29T03:32:24,985 Skipping link: not a file: https://pypi.org/simple/trisicell/ 2022-12-29T03:32:25,006 Given no hashes to check 1 links for project 'trisicell': discarding no candidates 2022-12-29T03:32:25,022 Collecting trisicell==0.1.1 2022-12-29T03:32:25,025 Created temporary directory: /tmp/pip-unpack-x9hxlr2k 2022-12-29T03:32:25,074 Downloading trisicell-0.1.1.tar.gz (43.2 MB) 2022-12-29T03:32:31,046 Added trisicell==0.1.1 from https://files.pythonhosted.org/packages/c1/0e/42a8f71f25e956bed0fe923528bc174c2f3410bec48c5e9de48d4d1b8239/trisicell-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-ysymv98r' 2022-12-29T03:32:31,054 Created temporary directory: /tmp/pip-build-env-wwlim0w0 2022-12-29T03:32:31,061 Installing build dependencies: started 2022-12-29T03:32:31,062 Running command pip subprocess to install build dependencies 2022-12-29T03:32:32,316 Using pip 22.3 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2022-12-29T03:32:32,728 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T03:32:32,753 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T03:32:34,347 Collecting setuptools 2022-12-29T03:32:34,480 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-29T03:32:34,929 Collecting setuptools_scm 2022-12-29T03:32:35,010 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2022-12-29T03:32:35,267 Collecting wheel 2022-12-29T03:32:35,286 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-29T03:32:36,490 Collecting numpy 2022-12-29T03:32:37,761 Using cached https://www.piwheels.org/simple/numpy/numpy-1.24.1-cp39-cp39-linux_armv7l.whl (12.3 MB) 2022-12-29T03:32:39,398 Collecting Cython 2022-12-29T03:32:39,872 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.32-cp39-cp39-linux_armv7l.whl (5.0 MB) 2022-12-29T03:32:40,168 Collecting tomli>=1.0.0 2022-12-29T03:32:40,185 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-12-29T03:32:40,324 Collecting typing-extensions 2022-12-29T03:32:40,341 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-12-29T03:32:40,540 Collecting packaging>=20.0 2022-12-29T03:32:40,558 Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB) 2022-12-29T03:32:42,618 Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, numpy, Cython, setuptools_scm 2022-12-29T03:32:42,770 Creating /tmp/pip-build-env-wwlim0w0/overlay/bin 2022-12-29T03:32:42,773 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/wheel to 755 2022-12-29T03:32:54,755 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/f2py to 755 2022-12-29T03:32:54,757 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/f2py3 to 755 2022-12-29T03:32:54,760 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/f2py3.9 to 755 2022-12-29T03:32:57,778 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/cygdb to 755 2022-12-29T03:32:57,780 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/cython to 755 2022-12-29T03:32:57,782 changing mode of /tmp/pip-build-env-wwlim0w0/overlay/bin/cythonize to 755 2022-12-29T03:32:58,020 Successfully installed Cython-0.29.32 numpy-1.24.1 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 2022-12-29T03:32:58,035 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-29T03:32:58,035 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-29T03:32:58,424 Installing build dependencies: finished with status 'done' 2022-12-29T03:32:58,429 Getting requirements to build wheel: started 2022-12-29T03:32:58,430 Running command Getting requirements to build wheel 2022-12-29T03:33:00,340 Getting requirements to build wheel: finished with status 'done' 2022-12-29T03:33:00,355 Created temporary directory: /tmp/pip-modern-metadata-oufakvti 2022-12-29T03:33:00,358 Preparing metadata (pyproject.toml): started 2022-12-29T03:33:00,359 Running command Preparing metadata (pyproject.toml) 2022-12-29T03:33:01,115 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2022-12-29T03:33:01,115 warnings.warn(msg) 2022-12-29T03:33:01,362 running dist_info 2022-12-29T03:33:01,385 creating /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info 2022-12-29T03:33:01,393 writing /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/PKG-INFO 2022-12-29T03:33:01,396 writing dependency_links to /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/dependency_links.txt 2022-12-29T03:33:01,398 writing entry points to /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/entry_points.txt 2022-12-29T03:33:01,400 writing requirements to /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/requires.txt 2022-12-29T03:33:01,401 writing top-level names to /tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/top_level.txt 2022-12-29T03:33:01,402 writing manifest file '/tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/SOURCES.txt' 2022-12-29T03:33:01,737 listing git files failed - pretending there aren't any 2022-12-29T03:33:01,747 reading manifest file '/tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/SOURCES.txt' 2022-12-29T03:33:01,752 reading manifest template 'MANIFEST.in' 2022-12-29T03:33:01,754 no previously-included directories found matching 'docs' 2022-12-29T03:33:01,755 no previously-included directories found matching '.scripts' 2022-12-29T03:33:01,755 no previously-included directories found matching '.github' 2022-12-29T03:33:01,757 adding license file 'LICENSE' 2022-12-29T03:33:01,764 writing manifest file '/tmp/pip-modern-metadata-oufakvti/trisicell.egg-info/SOURCES.txt' 2022-12-29T03:33:01,766 creating '/tmp/pip-modern-metadata-oufakvti/trisicell-0.1.1.dist-info' 2022-12-29T03:33:02,047 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-29T03:33:02,055 Source in /tmp/pip-wheel-0gfw98dg/trisicell_62e9240d63da453dba30005598bcabbf has version 0.1.1, which satisfies requirement trisicell==0.1.1 from https://files.pythonhosted.org/packages/c1/0e/42a8f71f25e956bed0fe923528bc174c2f3410bec48c5e9de48d4d1b8239/trisicell-0.1.1.tar.gz 2022-12-29T03:33:02,056 Removed trisicell==0.1.1 from https://files.pythonhosted.org/packages/c1/0e/42a8f71f25e956bed0fe923528bc174c2f3410bec48c5e9de48d4d1b8239/trisicell-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-ysymv98r' 2022-12-29T03:33:02,063 Created temporary directory: /tmp/pip-unpack-7jb66p8h 2022-12-29T03:33:02,064 Building wheels for collected packages: trisicell 2022-12-29T03:33:02,070 Created temporary directory: /tmp/pip-wheel-ac9c01p3 2022-12-29T03:33:02,070 Destination directory: /tmp/pip-wheel-ac9c01p3 2022-12-29T03:33:02,072 Building wheel for trisicell (pyproject.toml): started 2022-12-29T03:33:02,073 Running command Building wheel for trisicell (pyproject.toml) 2022-12-29T03:33:02,807 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2022-12-29T03:33:02,808 warnings.warn(msg) 2022-12-29T03:33:03,083 running bdist_wheel 2022-12-29T03:33:03,350 running build 2022-12-29T03:33:03,350 running build_py 2022-12-29T03:33:03,361 creating build 2022-12-29T03:33:03,362 creating build/lib.linux-armv7l-cpython-39 2022-12-29T03:33:03,362 creating build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,364 copying tests/test_datasets.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,366 copying tests/test_logging.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,368 copying tests/test_commands.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,371 copying tests/test_pl.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,373 copying tests/_helpers.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,374 copying tests/__init__.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,376 copying tests/test_tl_solvers.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,378 copying tests/test_ul.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,380 copying tests/test_tl_scores.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,382 copying tests/test_pp.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,384 copying tests/test_tl_consensus.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,386 copying tests/test_tl_partition_function.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,387 copying tests/test_tl_solvers_tmp.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,389 copying tests/test_io.py -> build/lib.linux-armv7l-cpython-39/tests 2022-12-29T03:33:03,392 creating build/lib.linux-armv7l-cpython-39/trisicell 2022-12-29T03:33:03,392 copying trisicell/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell 2022-12-29T03:33:03,395 creating build/lib.linux-armv7l-cpython-39/trisicell/settings 2022-12-29T03:33:03,396 copying trisicell/settings/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2022-12-29T03:33:03,398 copying trisicell/settings/_settings.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2022-12-29T03:33:03,400 creating build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,401 copying trisicell/ul/_hclustering.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,404 copying trisicell/ul/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,406 copying trisicell/ul/_servers.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,408 copying trisicell/ul/_packages.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,410 copying trisicell/ul/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,412 copying trisicell/ul/_utils.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2022-12-29T03:33:03,415 creating build/lib.linux-armv7l-cpython-39/trisicell/logging 2022-12-29T03:33:03,416 copying trisicell/logging/_logging.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2022-12-29T03:33:03,418 copying trisicell/logging/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2022-12-29T03:33:03,421 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets 2022-12-29T03:33:03,422 copying trisicell/datasets/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2022-12-29T03:33:03,424 copying trisicell/datasets/_simulate.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2022-12-29T03:33:03,426 copying trisicell/datasets/_datasets.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2022-12-29T03:33:03,430 creating build/lib.linux-armv7l-cpython-39/trisicell/tl 2022-12-29T03:33:03,431 copying trisicell/tl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl 2022-12-29T03:33:03,448 creating build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:03,449 copying trisicell/external/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:03,451 copying trisicell/external/_mp3.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:03,453 copying trisicell/external/_betabinom.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:03,458 creating build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,459 copying trisicell/commands/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,461 copying trisicell/commands/trisicell.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,462 copying trisicell/commands/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,464 copying trisicell/commands/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,466 copying trisicell/commands/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,468 copying trisicell/commands/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,470 copying trisicell/commands/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,472 copying trisicell/commands/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,473 copying trisicell/commands/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,476 copying trisicell/commands/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,478 copying trisicell/commands/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,480 copying trisicell/commands/_mcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,482 copying trisicell/commands/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,484 copying trisicell/commands/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,487 copying trisicell/commands/_score.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,488 copying trisicell/commands/_search.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,490 copying trisicell/commands/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,492 copying trisicell/commands/_partf.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,494 copying trisicell/commands/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2022-12-29T03:33:03,496 creating build/lib.linux-armv7l-cpython-39/trisicell/pl 2022-12-29T03:33:03,497 copying trisicell/pl/_helper.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2022-12-29T03:33:03,500 copying trisicell/pl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2022-12-29T03:33:03,502 copying trisicell/pl/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2022-12-29T03:33:03,505 copying trisicell/pl/_data.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2022-12-29T03:33:03,508 creating build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,508 copying trisicell/pp/_bifiltering.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,511 copying trisicell/pp/_binary.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,512 copying trisicell/pp/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,514 copying trisicell/pp/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,516 copying trisicell/pp/_readcount.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2022-12-29T03:33:03,519 creating build/lib.linux-armv7l-cpython-39/trisicell/io 2022-12-29T03:33:03,520 copying trisicell/io/_genotype.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2022-12-29T03:33:03,522 copying trisicell/io/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2022-12-29T03:33:03,524 copying trisicell/io/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2022-12-29T03:33:03,527 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,528 copying trisicell/tl/solver/_cellphy.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,530 copying trisicell/tl/solver/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,532 copying trisicell/tl/solver/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,534 copying trisicell/tl/solver/_dendro.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,536 copying trisicell/tl/solver/_scelestial.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,538 copying trisicell/tl/solver/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,540 copying trisicell/tl/solver/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,543 copying trisicell/tl/solver/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,545 copying trisicell/tl/solver/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,548 copying trisicell/tl/solver/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,550 copying trisicell/tl/solver/_sciphi.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,552 copying trisicell/tl/solver/_cardelino.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,554 copying trisicell/tl/solver/_sbm.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,556 copying trisicell/tl/solver/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,559 copying trisicell/tl/solver/_sasc.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,561 copying trisicell/tl/solver/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,563 copying trisicell/tl/solver/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2022-12-29T03:33:03,565 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2022-12-29T03:33:03,566 copying trisicell/tl/consensus/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2022-12-29T03:33:03,568 copying trisicell/tl/consensus/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2022-12-29T03:33:03,570 copying trisicell/tl/consensus/_consensus_day.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2022-12-29T03:33:03,573 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2022-12-29T03:33:03,574 copying trisicell/tl/partition_function/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2022-12-29T03:33:03,576 copying trisicell/tl/partition_function/_pf.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2022-12-29T03:33:03,578 copying trisicell/tl/partition_function/_clt_sampler.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2022-12-29T03:33:03,580 copying trisicell/tl/partition_function/_partition_function.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2022-12-29T03:33:03,583 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2022-12-29T03:33:03,584 copying trisicell/tl/score/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2022-12-29T03:33:03,586 copying trisicell/tl/score/_others.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2022-12-29T03:33:03,588 copying trisicell/tl/score/_ours.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2022-12-29T03:33:03,591 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2022-12-29T03:33:03,592 copying trisicell/tl/fitch/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2022-12-29T03:33:03,594 copying trisicell/tl/fitch/_fitch.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2022-12-29T03:33:03,597 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2022-12-29T03:33:03,598 copying trisicell/tl/cna/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2022-12-29T03:33:03,599 copying trisicell/tl/cna/_cna.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2022-12-29T03:33:03,602 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2022-12-29T03:33:03,603 copying trisicell/tl/solver/huntress/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2022-12-29T03:33:03,606 copying trisicell/tl/solver/huntress/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2022-12-29T03:33:03,609 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,610 copying trisicell/tl/solver/booster/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,612 copying trisicell/tl/solver/booster/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,614 copying trisicell/tl/solver/booster/_dependencies.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,616 copying trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,619 copying trisicell/tl/solver/booster/_subsamples.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2022-12-29T03:33:03,622 creating build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,623 copying trisicell/external/gpps/_utils_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,625 copying trisicell/external/gpps/_nh2lgf.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,627 copying trisicell/external/gpps/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,629 copying trisicell/external/gpps/_utils_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,631 copying trisicell/external/gpps/_gpps_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,634 copying trisicell/external/gpps/_gpps_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2022-12-29T03:33:03,637 creating build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,638 copying trisicell/commands/mcalling/s07merging.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,640 copying trisicell/commands/mcalling/z01status.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,642 copying trisicell/commands/mcalling/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,643 copying trisicell/commands/mcalling/s10velocitying.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,645 copying trisicell/commands/mcalling/s04mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,648 copying trisicell/commands/mcalling/s02mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,650 copying trisicell/commands/mcalling/s09expressing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,652 copying trisicell/commands/mcalling/s03indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,654 copying trisicell/commands/mcalling/s08annotating.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,656 copying trisicell/commands/mcalling/s06jointcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,658 copying trisicell/commands/mcalling/z03clean.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,660 copying trisicell/commands/mcalling/s05calling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,662 copying trisicell/commands/mcalling/z02matrixing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,664 copying trisicell/commands/mcalling/s01indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2022-12-29T03:33:03,666 running egg_info 2022-12-29T03:33:03,692 writing trisicell.egg-info/PKG-INFO 2022-12-29T03:33:03,694 writing dependency_links to trisicell.egg-info/dependency_links.txt 2022-12-29T03:33:03,696 writing entry points to trisicell.egg-info/entry_points.txt 2022-12-29T03:33:03,698 writing requirements to trisicell.egg-info/requires.txt 2022-12-29T03:33:03,699 writing top-level names to trisicell.egg-info/top_level.txt 2022-12-29T03:33:03,752 listing git files failed - pretending there aren't any 2022-12-29T03:33:03,762 reading manifest file 'trisicell.egg-info/SOURCES.txt' 2022-12-29T03:33:03,785 reading manifest template 'MANIFEST.in' 2022-12-29T03:33:03,788 no previously-included directories found matching '.scripts' 2022-12-29T03:33:03,789 no previously-included directories found matching '.github' 2022-12-29T03:33:03,790 adding license file 'LICENSE' 2022-12-29T03:33:03,804 writing manifest file 'trisicell.egg-info/SOURCES.txt' 2022-12-29T03:33:03,808 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.datasets.data' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,809 !! 2022-12-29T03:33:03,809 ############################ 2022-12-29T03:33:03,809 # Package would be ignored # 2022-12-29T03:33:03,809 ############################ 2022-12-29T03:33:03,809 Python recognizes 'trisicell.datasets.data' as an importable package, 2022-12-29T03:33:03,810 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,810 'trisicell.datasets.data' has been automatically added to the distribution only 2022-12-29T03:33:03,810 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,810 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,810 Please make sure that 'trisicell.datasets.data' is included as a package by using 2022-12-29T03:33:03,810 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,811 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,811 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,811 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,811 documentation page. 2022-12-29T03:33:03,811 !! 2022-12-29T03:33:03,812 check.warn(importable) 2022-12-29T03:33:03,812 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.datasets.real' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,812 !! 2022-12-29T03:33:03,812 ############################ 2022-12-29T03:33:03,812 # Package would be ignored # 2022-12-29T03:33:03,813 ############################ 2022-12-29T03:33:03,813 Python recognizes 'trisicell.datasets.real' as an importable package, 2022-12-29T03:33:03,813 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,813 'trisicell.datasets.real' has been automatically added to the distribution only 2022-12-29T03:33:03,813 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,813 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,814 Please make sure that 'trisicell.datasets.real' is included as a package by using 2022-12-29T03:33:03,814 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,814 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,814 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,814 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,814 documentation page. 2022-12-29T03:33:03,815 !! 2022-12-29T03:33:03,815 check.warn(importable) 2022-12-29T03:33:03,815 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.datasets.test' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,815 !! 2022-12-29T03:33:03,815 ############################ 2022-12-29T03:33:03,816 # Package would be ignored # 2022-12-29T03:33:03,816 ############################ 2022-12-29T03:33:03,816 Python recognizes 'trisicell.datasets.test' as an importable package, 2022-12-29T03:33:03,816 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,816 'trisicell.datasets.test' has been automatically added to the distribution only 2022-12-29T03:33:03,816 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,816 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,817 Please make sure that 'trisicell.datasets.test' is included as a package by using 2022-12-29T03:33:03,817 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,817 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,817 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,817 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,817 documentation page. 2022-12-29T03:33:03,818 !! 2022-12-29T03:33:03,818 check.warn(importable) 2022-12-29T03:33:03,818 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.datasets.test.consensus' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,818 !! 2022-12-29T03:33:03,819 ############################ 2022-12-29T03:33:03,819 # Package would be ignored # 2022-12-29T03:33:03,819 ############################ 2022-12-29T03:33:03,819 Python recognizes 'trisicell.datasets.test.consensus' as an importable package, 2022-12-29T03:33:03,819 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,819 'trisicell.datasets.test.consensus' has been automatically added to the distribution only 2022-12-29T03:33:03,819 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,819 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,820 Please make sure that 'trisicell.datasets.test.consensus' is included as a package by using 2022-12-29T03:33:03,820 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,820 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,820 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,820 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,820 documentation page. 2022-12-29T03:33:03,821 !! 2022-12-29T03:33:03,821 check.warn(importable) 2022-12-29T03:33:03,821 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.datasets.test.mcalling' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,821 !! 2022-12-29T03:33:03,822 ############################ 2022-12-29T03:33:03,822 # Package would be ignored # 2022-12-29T03:33:03,822 ############################ 2022-12-29T03:33:03,822 Python recognizes 'trisicell.datasets.test.mcalling' as an importable package, 2022-12-29T03:33:03,822 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,822 'trisicell.datasets.test.mcalling' has been automatically added to the distribution only 2022-12-29T03:33:03,822 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,822 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,823 Please make sure that 'trisicell.datasets.test.mcalling' is included as a package by using 2022-12-29T03:33:03,823 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,823 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,823 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,823 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,823 documentation page. 2022-12-29T03:33:03,824 !! 2022-12-29T03:33:03,824 check.warn(importable) 2022-12-29T03:33:03,824 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.external.mltd' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,824 !! 2022-12-29T03:33:03,825 ############################ 2022-12-29T03:33:03,825 # Package would be ignored # 2022-12-29T03:33:03,825 ############################ 2022-12-29T03:33:03,825 Python recognizes 'trisicell.external.mltd' as an importable package, 2022-12-29T03:33:03,825 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,825 'trisicell.external.mltd' has been automatically added to the distribution only 2022-12-29T03:33:03,825 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,825 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,826 Please make sure that 'trisicell.external.mltd' is included as a package by using 2022-12-29T03:33:03,826 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,826 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,826 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,826 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,826 documentation page. 2022-12-29T03:33:03,827 !! 2022-12-29T03:33:03,827 check.warn(importable) 2022-12-29T03:33:03,827 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.external.scistree' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,827 !! 2022-12-29T03:33:03,827 ############################ 2022-12-29T03:33:03,828 # Package would be ignored # 2022-12-29T03:33:03,828 ############################ 2022-12-29T03:33:03,828 Python recognizes 'trisicell.external.scistree' as an importable package, 2022-12-29T03:33:03,828 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,828 'trisicell.external.scistree' has been automatically added to the distribution only 2022-12-29T03:33:03,828 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,828 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,829 Please make sure that 'trisicell.external.scistree' is included as a package by using 2022-12-29T03:33:03,829 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,829 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,829 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,829 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,829 documentation page. 2022-12-29T03:33:03,830 !! 2022-12-29T03:33:03,830 check.warn(importable) 2022-12-29T03:33:03,830 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.external.scite' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,830 !! 2022-12-29T03:33:03,830 ############################ 2022-12-29T03:33:03,830 # Package would be ignored # 2022-12-29T03:33:03,831 ############################ 2022-12-29T03:33:03,831 Python recognizes 'trisicell.external.scite' as an importable package, 2022-12-29T03:33:03,831 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,831 'trisicell.external.scite' has been automatically added to the distribution only 2022-12-29T03:33:03,831 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,831 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,831 Please make sure that 'trisicell.external.scite' is included as a package by using 2022-12-29T03:33:03,832 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,832 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,832 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,832 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,832 documentation page. 2022-12-29T03:33:03,833 !! 2022-12-29T03:33:03,833 check.warn(importable) 2022-12-29T03:33:03,833 /tmp/pip-build-env-wwlim0w0/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'trisicell.external.scprob' as data is deprecated, please list it in `packages`. 2022-12-29T03:33:03,833 !! 2022-12-29T03:33:03,834 ############################ 2022-12-29T03:33:03,834 # Package would be ignored # 2022-12-29T03:33:03,834 ############################ 2022-12-29T03:33:03,834 Python recognizes 'trisicell.external.scprob' as an importable package, 2022-12-29T03:33:03,835 but it is not listed in the `packages` configuration of setuptools. 2022-12-29T03:33:03,835 'trisicell.external.scprob' has been automatically added to the distribution only 2022-12-29T03:33:03,835 because it may contain data files, but this behavior is likely to change 2022-12-29T03:33:03,835 in future versions of setuptools (and therefore is considered deprecated). 2022-12-29T03:33:03,835 Please make sure that 'trisicell.external.scprob' is included as a package by using 2022-12-29T03:33:03,835 the `packages` configuration field or the proper discovery methods 2022-12-29T03:33:03,835 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2022-12-29T03:33:03,836 instead of `find_packages(...)`/`find:`). 2022-12-29T03:33:03,836 You can read more about "package discovery" and "data files" on setuptools 2022-12-29T03:33:03,836 documentation page. 2022-12-29T03:33:03,836 !! 2022-12-29T03:33:03,837 check.warn(importable) 2022-12-29T03:33:03,837 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2022-12-29T03:33:03,837 copying trisicell/datasets/data/expression.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2022-12-29T03:33:03,987 copying trisicell/datasets/data/genotype.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2022-12-29T03:33:03,996 copying trisicell/datasets/data/sublines_scrnaseq.h5md.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2022-12-29T03:33:04,482 copying trisicell/datasets/data/sublines_wes.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2022-12-29T03:33:04,547 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,549 copying trisicell/datasets/real/acute_lymphocytic_leukemia1.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,553 copying trisicell/datasets/real/acute_lymphocytic_leukemia2.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,556 copying trisicell/datasets/real/acute_lymphocytic_leukemia3.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,561 copying trisicell/datasets/real/acute_lymphocytic_leukemia4.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,566 copying trisicell/datasets/real/acute_lymphocytic_leukemia5.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,571 copying trisicell/datasets/real/acute_lymphocytic_leukemia6.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,575 copying trisicell/datasets/real/colorectal1.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,580 copying trisicell/datasets/real/colorectal2.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,584 copying trisicell/datasets/real/colorectal2.rc.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,589 copying trisicell/datasets/real/erbc.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,596 copying trisicell/datasets/real/melanoma20.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,625 copying trisicell/datasets/real/muscle_invasive_bladder.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,632 copying trisicell/datasets/real/myeloproliferative_neoplasms18.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,636 copying trisicell/datasets/real/myeloproliferative_neoplasms712.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,647 copying trisicell/datasets/real/myeloproliferative_neoplasms78.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,651 copying trisicell/datasets/real/oligodendroglioma_idh_mutated_tumor.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:04,658 copying trisicell/datasets/real/ovarian.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:05,037 copying trisicell/datasets/real/renal_cell_carcinoma.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:05,040 copying trisicell/datasets/real/tnbc.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2022-12-29T03:33:05,043 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,043 copying trisicell/datasets/test/T00.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,046 copying trisicell/datasets/test/T06.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,049 copying trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,052 copying trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,055 copying trisicell/datasets/test/mcalling_config.yml -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,058 copying trisicell/datasets/test/test.tsv -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2022-12-29T03:33:05,060 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,061 copying trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,069 copying trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,073 copying trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,089 copying trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,094 copying trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,098 copying trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,103 copying trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2022-12-29T03:33:05,109 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,110 copying trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,113 copying trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,115 copying trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,118 copying trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,120 copying trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,123 copying trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,125 copying trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,128 copying trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,131 copying trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,133 copying trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,136 copying trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,138 copying trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,141 copying trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,143 copying trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,153 copying trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,156 copying trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,158 copying trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,161 copying trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,163 copying trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,166 copying trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2022-12-29T03:33:05,171 copying trisicell/external/_mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,177 copying trisicell/external/_mltd.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,179 copying trisicell/external/_scistree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,187 copying trisicell/external/_scistree.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,189 copying trisicell/external/_scite.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,195 copying trisicell/external/_scite.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,197 copying trisicell/external/_scprob.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,203 copying trisicell/external/_scprob.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,206 creating build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2022-12-29T03:33:05,207 copying trisicell/external/mltd/mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2022-12-29T03:33:05,210 copying trisicell/external/mltd/mltd.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2022-12-29T03:33:05,212 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,214 copying trisicell/external/scistree/BinaryMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,218 copying trisicell/external/scistree/BinaryMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,221 copying trisicell/external/scistree/BioSequenceMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,224 copying trisicell/external/scistree/BioSequenceMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,227 copying trisicell/external/scistree/GenotypeMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,230 copying trisicell/external/scistree/GenotypeMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,233 copying trisicell/external/scistree/MarginalTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,238 copying trisicell/external/scistree/MarginalTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,241 copying trisicell/external/scistree/PhylogenyTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,245 copying trisicell/external/scistree/PhylogenyTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,248 copying trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,255 copying trisicell/external/scistree/PhylogenyTreeBasic.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,259 copying trisicell/external/scistree/RBT.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,264 copying trisicell/external/scistree/RBT.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,267 copying trisicell/external/scistree/RerootTreeUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,270 copying trisicell/external/scistree/RerootTreeUtils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,273 copying trisicell/external/scistree/ScistDoublet.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,281 copying trisicell/external/scistree/ScistDoublet.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,284 copying trisicell/external/scistree/ScistErrRateInf.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,287 copying trisicell/external/scistree/ScistErrRateInf.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,290 copying trisicell/external/scistree/ScistGenotype.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,293 copying trisicell/external/scistree/ScistGenotype.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,296 copying trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,300 copying trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,303 copying trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,306 copying trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,309 copying trisicell/external/scistree/TreeBuilder.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,313 copying trisicell/external/scistree/TreeBuilder.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,316 copying trisicell/external/scistree/UnWeightedGraph.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,320 copying trisicell/external/scistree/UnWeightedGraph.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,323 copying trisicell/external/scistree/Utils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,328 copying trisicell/external/scistree/Utils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,331 copying trisicell/external/scistree/Utils2.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,335 copying trisicell/external/scistree/Utils2.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,338 copying trisicell/external/scistree/Utils3.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,342 copying trisicell/external/scistree/Utils3.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,345 copying trisicell/external/scistree/Utils4.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,366 copying trisicell/external/scistree/Utils4.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,370 copying trisicell/external/scistree/UtilsNumerical.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,373 copying trisicell/external/scistree/UtilsNumerical.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,376 copying trisicell/external/scistree/ctpl_stl.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,379 copying trisicell/external/scistree/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,383 copying trisicell/external/scistree/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:05,385 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,386 copying trisicell/external/scite/findBestTrees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,390 copying trisicell/external/scite/findBestTrees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,392 copying trisicell/external/scite/matrices.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,396 copying trisicell/external/scite/matrices.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,398 copying trisicell/external/scite/mcmc.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,402 copying trisicell/external/scite/mcmc.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,404 copying trisicell/external/scite/mcmcBinTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,407 copying trisicell/external/scite/mcmcBinTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,409 copying trisicell/external/scite/mcmcTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,413 copying trisicell/external/scite/mcmcTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,415 copying trisicell/external/scite/output.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,418 copying trisicell/external/scite/output.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,421 copying trisicell/external/scite/rand.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,423 copying trisicell/external/scite/rand.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,426 copying trisicell/external/scite/scoreBinTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,429 copying trisicell/external/scite/scoreBinTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,432 copying trisicell/external/scite/scoreTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,435 copying trisicell/external/scite/scoreTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,437 copying trisicell/external/scite/treelist.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,440 copying trisicell/external/scite/treelist.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,443 copying trisicell/external/scite/trees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,446 copying trisicell/external/scite/trees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:33:05,448 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2022-12-29T03:33:05,450 copying trisicell/external/scprob/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2022-12-29T03:33:05,453 copying trisicell/external/scprob/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2022-12-29T03:33:05,471 running build_ext 2022-12-29T03:33:05,477 building 'trisicell.external._mltd' extension 2022-12-29T03:33:05,479 creating build/temp.linux-armv7l-cpython-39 2022-12-29T03:33:05,479 creating build/temp.linux-armv7l-cpython-39/trisicell 2022-12-29T03:33:05,480 creating build/temp.linux-armv7l-cpython-39/trisicell/external 2022-12-29T03:33:05,482 creating build/temp.linux-armv7l-cpython-39/trisicell/external/mltd 2022-12-29T03:33:05,483 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/_mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o -std=c++11 2022-12-29T03:33:08,418 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/mltd/mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -std=c++11 2022-12-29T03:33:14,844 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so 2022-12-29T03:33:15,163 building 'trisicell.external._scprob' extension 2022-12-29T03:33:15,164 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scprob 2022-12-29T03:33:15,165 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/_scprob.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o -std=c++11 2022-12-29T03:33:16,717 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/scprob/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -std=c++11 2022-12-29T03:33:18,975 trisicell/external/scprob/main.cpp:501:13: warning: ‘void AdjustReadCountForDrop(int, int, const std::map, std::pair >&, std::pair&)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,975 501 | static void AdjustReadCountForDrop(int cell, int site, const map, pair > &setDropPos, pair &readCount) 2022-12-29T03:33:18,975 | ^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:18,975 trisicell/external/scprob/main.cpp:487:13: warning: ‘void ConvReadBasedProbToGeno(const std::vector > >&, std::vector >&)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,976 487 | static void ConvReadBasedProbToGeno( const vector > > &listReadBasedProb, vector > &listGenos) 2022-12-29T03:33:18,976 | ^~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:18,976 trisicell/external/scprob/main.cpp:440:12: warning: ‘int CountTotAlleleForGenos(const std::map >&)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,976 440 | static int CountTotAlleleForGenos(const map > &mapGenosOfCells) 2022-12-29T03:33:18,976 | ^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:18,976 trisicell/external/scprob/main.cpp:426:12: warning: ‘int CalcAllele0FreqForGenos(const std::vector&)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,977 426 | static int CalcAllele0FreqForGenos(const vector &listGenos) 2022-12-29T03:33:18,977 | ^~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:18,977 trisicell/external/scprob/main.cpp:242:13: warning: ‘void CalcGenotypeProbOfReads(const std::pair&, double, std::vector&)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,977 242 | static void CalcGenotypeProbOfReads(const pair &readsCount01, double allele0Freq, vector &listGenoProbs) 2022-12-29T03:33:18,977 | ^~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:18,977 trisicell/external/scprob/main.cpp:166:15: warning: ‘double CalcProb1()’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,978 166 | static double CalcProb1() 2022-12-29T03:33:18,978 | ^~~~~~~~~ 2022-12-29T03:33:18,978 trisicell/external/scprob/main.cpp:158:15: warning: ‘double CalcProb0(int)’ defined but not used [-Wunused-function] 2022-12-29T03:33:18,978 158 | static double CalcProb0(int cell) 2022-12-29T03:33:18,978 | ^~~~~~~~~ 2022-12-29T03:33:18,978 trisicell/external/scprob/main.cpp:37:15: warning: ‘stdStrandBias’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,979 37 | static double stdStrandBias = 0.0; 2022-12-29T03:33:18,979 | ^~~~~~~~~~~~~ 2022-12-29T03:33:18,979 trisicell/external/scprob/main.cpp:36:15: warning: ‘aveStrandBias’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,979 36 | static double aveStrandBias = 0.0; 2022-12-29T03:33:18,979 | ^~~~~~~~~~~~~ 2022-12-29T03:33:18,979 trisicell/external/scprob/main.cpp:35:15: warning: ‘stdReadDepth’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,979 35 | static double stdReadDepth = 2.0; 2022-12-29T03:33:18,980 | ^~~~~~~~~~~~ 2022-12-29T03:33:18,980 trisicell/external/scprob/main.cpp:34:15: warning: ‘aveReadDepth’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,980 34 | static double aveReadDepth = 4.0; 2022-12-29T03:33:18,980 | ^~~~~~~~~~~~ 2022-12-29T03:33:18,980 trisicell/external/scprob/main.cpp:28:15: warning: ‘minAlleFreq’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,980 28 | static double minAlleFreq = 0.0; 2022-12-29T03:33:18,980 | ^~~~~~~~~~~ 2022-12-29T03:33:18,980 trisicell/external/scprob/main.cpp:27:13: warning: ‘seedRndUserDef’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,981 27 | static bool seedRndUserDef = true; 2022-12-29T03:33:18,981 | ^~~~~~~~~~~~~~ 2022-12-29T03:33:18,981 trisicell/external/scprob/main.cpp:26:15: warning: ‘fracMissing’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,981 26 | static double fracMissing = 0.0; 2022-12-29T03:33:18,981 | ^~~~~~~~~~~ 2022-12-29T03:33:18,981 trisicell/external/scprob/main.cpp:24:15: warning: ‘rateDropoutstd’ defined but not used [-Wunused-variable] 2022-12-29T03:33:18,981 24 | static double rateDropoutstd = 0.0; 2022-12-29T03:33:18,982 | ^~~~~~~~~~~~~~ 2022-12-29T03:33:19,670 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:33:19,670 from trisicell/external/scprob/main.cpp:8: 2022-12-29T03:33:19,671 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:33:19,671 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:19,671 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:33:19,671 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:20,545 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:33:20,545 from trisicell/external/scprob/main.cpp:8: 2022-12-29T03:33:20,545 /usr/include/c++/10/bits/stl_vector.h: In function ‘int main_in_c(int, char**)’: 2022-12-29T03:33:20,545 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,545 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,546 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,546 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,546 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,546 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,549 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,549 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,549 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,549 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,549 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,549 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,550 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,550 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,550 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,550 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,551 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,551 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,551 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,551 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,551 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,551 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,551 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,552 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:20,552 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:20,552 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:20,552 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:22,149 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so 2022-12-29T03:33:22,451 building 'trisicell.external._scistree' extension 2022-12-29T03:33:22,453 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scistree 2022-12-29T03:33:22,455 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/_scistree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o -O3 -std=c++11 -c 2022-12-29T03:33:24,069 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BinaryMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o -O3 -std=c++11 -c 2022-12-29T03:33:25,651 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘void BinaryMatrix::TrimDupSites(std::set*, bool)’: 2022-12-29T03:33:25,651 trisicell/external/scistree/BinaryMatrix.cpp:96:9: warning: variable ‘f’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:33:25,651 96 | bool f = false; 2022-12-29T03:33:25,651 | ^ 2022-12-29T03:33:25,682 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘bool BinaryMatrix::IsCompatibleRooted(int, int, int, int)’: 2022-12-29T03:33:25,682 trisicell/external/scistree/BinaryMatrix.cpp:870:7: warning: variable ‘f00’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:33:25,682 870 | bool f00 = false; 2022-12-29T03:33:25,682 | ^~~ 2022-12-29T03:33:32,184 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:33:32,184 from trisicell/external/scistree/BinaryMatrix.h:5, 2022-12-29T03:33:32,184 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2022-12-29T03:33:32,185 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:33:32,185 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:32,185 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:33:32,185 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:32,185 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:32,289 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:33:32,289 from trisicell/external/scistree/BinaryMatrix.h:5, 2022-12-29T03:33:32,289 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2022-12-29T03:33:32,290 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ReadSitePosFromFirstRowInFile(const char*, int, std::vector&)’: 2022-12-29T03:33:32,290 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:32,290 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:32,290 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:34,136 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:33:34,136 from trisicell/external/scistree/BinaryMatrix.h:5, 2022-12-29T03:33:34,137 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2022-12-29T03:33:34,137 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:33:34,137 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:34,137 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:33:34,137 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:34,176 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CalcSFS(std::vector&) const’: 2022-12-29T03:33:34,176 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:34,176 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:34,176 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:34,211 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CollectAllPairwiseDiffs(const std::set&, const std::set&, std::vector&) const’: 2022-12-29T03:33:34,212 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:34,212 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:34,212 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:35,543 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BioSequenceMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o -O3 -std=c++11 -c 2022-12-29T03:33:36,907 trisicell/external/scistree/BioSequenceMatrix.cpp: In member function ‘void BioSequenceMatrix::TrimDupRows(std::set*, std::vector >*)’: 2022-12-29T03:33:36,908 trisicell/external/scistree/BioSequenceMatrix.cpp:273:7: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:33:36,908 273 | bool res = false; // we stop unless we find some duplicate rows and/or non-informat site 2022-12-29T03:33:36,908 | ^~~ 2022-12-29T03:33:44,210 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/GenotypeMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o -O3 -std=c++11 -c 2022-12-29T03:33:45,563 trisicell/external/scistree/GenotypeMatrix.cpp: In member function ‘bool GenotypeMatrix::AreColumnsComplete(int, int)’: 2022-12-29T03:33:45,564 trisicell/external/scistree/GenotypeMatrix.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:33:45,564 140 | for (int i = 0; i < completePairs.size(); ++i) 2022-12-29T03:33:45,564 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:48,028 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/MarginalTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o -O3 -std=c++11 -c 2022-12-29T03:33:56,133 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:33:56,133 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:33:56,133 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:33:56,133 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:33:56,133 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:56,134 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:33:56,134 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:56,396 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:33:56,396 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:33:56,397 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:33:56,397 /usr/include/c++/10/bits/stl_vector.h: In function ‘bool ReadinMarginalTrees(std::ifstream&, std::vector&)’: 2022-12-29T03:33:56,397 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:56,397 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:33:56,397 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:33:59,802 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:33:59,802 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:33:59,803 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:33:59,803 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:33:59,803 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:59,803 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:33:59,803 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,803 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:33:59,845 /usr/include/c++/10/bits/vector.tcc: In function ‘void InitMarginalTree(MarginalTree&, int, const std::vector&, const std::vector&)’: 2022-12-29T03:33:59,846 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,846 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,846 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,846 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,846 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,846 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,847 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,847 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,847 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,898 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTree(int, MarginalTree&)’: 2022-12-29T03:33:59,899 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,899 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,899 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,899 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,899 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,899 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:33:59,969 /usr/include/c++/10/bits/vector.tcc: In function ‘bool ReadinMarginalTreesNewickWLenString(const string&, int, MarginalTree&, bool, TaxaMapper*)’: 2022-12-29T03:33:59,970 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:33:59,970 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:33:59,970 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,261 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::InitUnitEdgelen()’: 2022-12-29T03:34:00,261 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,261 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,261 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,309 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:34:00,309 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,309 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,309 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::InitDefaultEdgeLen()’: 2022-12-29T03:34:00,309 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,310 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,310 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,310 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:00,310 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,310 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,310 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,310 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,311 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,456 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:34:00,456 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,456 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,456 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Binarize()’: 2022-12-29T03:34:00,457 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,457 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,457 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,457 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,457 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,457 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,458 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:00,458 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,458 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,458 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,458 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,459 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,459 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:34:00,459 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,459 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,459 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,459 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,459 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,730 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:00,730 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,730 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,730 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::MakeLeafSubtreeOfTwo(int, int, int, double, double)’: 2022-12-29T03:34:00,730 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,731 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,731 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,731 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:34:00,731 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,731 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,731 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,732 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,732 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,732 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,732 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:00,732 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:00,732 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:00,732 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,732 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,733 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,733 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,733 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,733 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,733 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,733 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,880 In file included from /usr/include/c++/10/set:60, 2022-12-29T03:34:00,881 from trisicell/external/scistree/Utils.h:6, 2022-12-29T03:34:00,881 from trisicell/external/scistree/MarginalTree.h:8, 2022-12-29T03:34:00,881 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,881 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2022-12-29T03:34:00,881 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:34:00,881 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:34:00,882 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,988 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:00,988 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:00,988 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,988 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTreeClock(int, double, MarginalTree&)’: 2022-12-29T03:34:00,989 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,989 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,989 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,989 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:00,989 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:00,989 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,990 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:34:00,990 from trisicell/external/scistree/Utils.h:7, 2022-12-29T03:34:00,991 from trisicell/external/scistree/MarginalTree.h:8, 2022-12-29T03:34:00,991 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:00,991 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:34:00,991 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:34:00,991 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,991 502 | std::tuple(__k), 2022-12-29T03:34:00,992 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,992 503 | std::tuple<>()); 2022-12-29T03:34:00,992 | ~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,992 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:34:00,992 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:34:00,992 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,992 502 | std::tuple(__k), 2022-12-29T03:34:00,993 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:00,993 503 | std::tuple<>()); 2022-12-29T03:34:00,993 | ~~~~~~~~~~~~~~~ 2022-12-29T03:34:01,416 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:34:01,417 from trisicell/external/scistree/MarginalTree.h:5, 2022-12-29T03:34:01,417 from trisicell/external/scistree/MarginalTree.cpp:1: 2022-12-29T03:34:01,417 /usr/include/c++/10/bits/stl_vector.h: In function ‘void UpdateBranchLenInSubtree(MarginalTree&, std::map&, MarginalTree&)’: 2022-12-29T03:34:01,417 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:01,417 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:01,417 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:02,559 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Consolidate()’: 2022-12-29T03:34:02,559 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:02,559 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:34:02,559 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:34:07,666 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o -O3 -std=c++11 -c 2022-12-29T03:34:09,162 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::SortByOneBit(int, const BinaryMatrix&, const std::vector&, std::vector&)’: 2022-12-29T03:34:09,163 trisicell/external/scistree/PhylogenyTree.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,163 95 | for (int i = 0; i < preList.size(); ++i) 2022-12-29T03:34:09,163 | ~~^~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,163 trisicell/external/scistree/PhylogenyTree.cpp:107:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,163 107 | for (int i = 0; i < preList.size(); ++i) 2022-12-29T03:34:09,163 | ~~^~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,167 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDupSites(const BinaryMatrix&, std::vector&, std::vector >&)’: 2022-12-29T03:34:09,167 trisicell/external/scistree/PhylogenyTree.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,168 129 | for (int i = 1; i < sortedPosList.size(); ++i) 2022-12-29T03:34:09,168 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,169 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::ComputeLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, std::vector&, std::vector&)’: 2022-12-29T03:34:09,169 trisicell/external/scistree/PhylogenyTree.cpp:182:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,169 182 | for (int j = 0; j < sortedPosList.size(); ++j) 2022-12-29T03:34:09,170 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,170 trisicell/external/scistree/PhylogenyTree.cpp:199:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,170 199 | for (int j = 0; j < sortedPosList.size(); ++j) 2022-12-29T03:34:09,170 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,171 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ExamineLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector&, const std::vector&)’: 2022-12-29T03:34:09,171 trisicell/external/scistree/PhylogenyTree.cpp:221:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,171 221 | for (int j = 0; j < sortedPosList.size(); ++j) 2022-12-29T03:34:09,172 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,177 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::BuildTree(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector >&, const std::vector&)’: 2022-12-29T03:34:09,177 trisicell/external/scistree/PhylogenyTree.cpp:250:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,177 250 | for (int i = 0; i < sortedPosList.size(); ++i) 2022-12-29T03:34:09,177 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,178 trisicell/external/scistree/PhylogenyTree.cpp:257:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,178 257 | for (int j = 0; j < Lj.size(); ++j) 2022-12-29T03:34:09,178 | ~~^~~~~~~~~~~ 2022-12-29T03:34:09,178 trisicell/external/scistree/PhylogenyTree.cpp:263:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,178 263 | for (int dup = 0; dup < duplicates[j].size(); ++dup) 2022-12-29T03:34:09,179 | ~~~~^~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,183 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::CleanupTree(const BinaryMatrix&)’: 2022-12-29T03:34:09,183 trisicell/external/scistree/PhylogenyTree.cpp:373:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,184 373 | for (int i = 0; i < curTN->nodeValues.size(); ++i) 2022-12-29T03:34:09,184 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,185 trisicell/external/scistree/PhylogenyTree.cpp:399:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,185 399 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2022-12-29T03:34:09,185 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,186 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDegreeTwoNodes()’: 2022-12-29T03:34:09,187 trisicell/external/scistree/PhylogenyTree.cpp:424:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,187 424 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2022-12-29T03:34:09,187 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:09,199 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ConsOnBinMatrix(const BinaryMatrix&)’: 2022-12-29T03:34:09,199 trisicell/external/scistree/PhylogenyTree.cpp:522:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:09,199 522 | for (int i = 0; i < Lij.size(); ++i) 2022-12-29T03:34:09,199 | ~~^~~~~~~~~~~~ 2022-12-29T03:34:09,292 trisicell/external/scistree/PhylogenyTree.cpp: In function ‘std::string ConsRootedPerfectPhylogenyFromMat(const BinaryMatrix&, bool, bool)’: 2022-12-29T03:34:09,292 trisicell/external/scistree/PhylogenyTree.cpp:564:26: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2022-12-29T03:34:09,293 564 | if (split.size() == matInput.GetRowNum()) 2022-12-29T03:34:09,293 | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:15,897 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTreeBasic.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o -O3 -std=c++11 -c 2022-12-29T03:34:17,591 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In function ‘bool ReadinPhyloTreesNewick(std::ifstream&, int, std::vector&, TaxaMapper*)’: 2022-12-29T03:34:17,592 trisicell/external/scistree/PhylogenyTreeBasic.cpp:105:9: warning: variable ‘nLvs’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:34:17,592 105 | int nLvs = numLeaves; 2022-12-29T03:34:17,592 | ^~~~ 2022-12-29T03:34:18,143 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘void TreeNode::IncEdgeLabelsBy(int, bool)’: 2022-12-29T03:34:18,144 trisicell/external/scistree/PhylogenyTreeBasic.cpp:2346:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:34:18,144 2346 | for (int j = 0; j < listEdgeLabels[i].size(); ++j) 2022-12-29T03:34:18,144 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:18,223 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘TreeNode* PhylogenyTreeBasic::ConsOnNewickSubtree(const string&, int&, int&, int, bool, TaxaMapper*)’: 2022-12-29T03:34:18,223 trisicell/external/scistree/PhylogenyTreeBasic.cpp:3543:13: warning: variable ‘rightPos’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:34:18,224 3543 | int rightPos = (int)nwStringPart.size() - 1; 2022-12-29T03:34:18,224 | ^~~~~~~~ 2022-12-29T03:34:37,613 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:34:37,614 from trisicell/external/scistree/PhylogenyTreeBasic.h:7, 2022-12-29T03:34:37,614 from trisicell/external/scistree/PhylogenyTreeBasic.cpp:5: 2022-12-29T03:34:37,614 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:34:37,614 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:34:37,615 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:34:37,615 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:44,868 /usr/include/c++/10/bits/vector.tcc: In function ‘void RandTrimLeavesFromTree(PhylogenyTreeBasic*, int)’: 2022-12-29T03:34:44,868 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:34:44,868 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:34:44,869 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:34:59,584 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RBT.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o -O3 -std=c++11 -c 2022-12-29T03:35:08,385 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:35:08,386 from trisicell/external/scistree/RBT.h:7, 2022-12-29T03:35:08,386 from trisicell/external/scistree/RBT.cpp:1: 2022-12-29T03:35:08,386 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:35:08,386 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:35:08,386 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:35:08,386 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:08,502 /usr/include/c++/10/bits/vector.tcc: In member function ‘void RBT::RetrievePlainDesc(int&, std::vector&, std::vector&, std::vector&)’: 2022-12-29T03:35:08,502 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:35:08,503 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:35:08,503 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:09,823 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RerootTreeUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o -O3 -std=c++11 -c 2022-12-29T03:35:11,012 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘double stringToDouble(std::string&)’: 2022-12-29T03:35:11,012 trisicell/external/scistree/RerootTreeUtils.cpp:62:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:35:11,012 62 | for (; i < content.size() && content[i] != '.'; ++i) 2022-12-29T03:35:11,012 | ~~^~~~~~~~~~~~~~~~ 2022-12-29T03:35:11,062 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2022-12-29T03:35:11,062 trisicell/external/scistree/RerootTreeUtils.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:35:11,063 95 | for (int i = 0; i < elements.size(); ++i) 2022-12-29T03:35:11,063 | ~~^~~~~~~~~~~~~~~~~ 2022-12-29T03:35:11,318 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void Test_split()’: 2022-12-29T03:35:11,319 trisicell/external/scistree/RerootTreeUtils.cpp:384:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:35:11,319 384 | for (int i = 0; i < elements.size(); ++i) 2022-12-29T03:35:11,319 | ~~^~~~~~~~~~~~~~~~~ 2022-12-29T03:35:11,319 trisicell/external/scistree/RerootTreeUtils.cpp:390:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:35:11,319 390 | for (int i = 0; i < elements.size(); ++i) 2022-12-29T03:35:11,319 | ~~^~~~~~~~~~~~~~~~~ 2022-12-29T03:35:14,488 In file included from /usr/include/c++/10/map:60, 2022-12-29T03:35:14,488 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2022-12-29T03:35:14,489 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2022-12-29T03:35:14,489 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:14,489 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:35:14,489 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:15,746 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:35:15,746 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2022-12-29T03:35:15,746 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:35:15,746 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:35:15,746 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:35:15,746 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,248 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:35:16,248 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2022-12-29T03:35:16,248 /usr/include/c++/10/bits/stl_map.h: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2022-12-29T03:35:16,249 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:16,249 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:16,249 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,249 502 | std::tuple(__k), 2022-12-29T03:35:16,249 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,249 503 | std::tuple<>()); 2022-12-29T03:35:16,249 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,250 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:16,250 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:16,250 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,250 502 | std::tuple(__k), 2022-12-29T03:35:16,250 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,250 503 | std::tuple<>()); 2022-12-29T03:35:16,250 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,251 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:16,251 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:16,251 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,251 502 | std::tuple(__k), 2022-12-29T03:35:16,251 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,251 503 | std::tuple<>()); 2022-12-29T03:35:16,252 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,252 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:16,252 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:16,252 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,252 502 | std::tuple(__k), 2022-12-29T03:35:16,252 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:16,252 503 | std::tuple<>()); 2022-12-29T03:35:16,253 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,752 /usr/include/c++/10/bits/stl_map.h: In function ‘std::string convert(char*, char*)’: 2022-12-29T03:35:17,752 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:17,753 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:17,753 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,753 502 | std::tuple(__k), 2022-12-29T03:35:17,753 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,753 503 | std::tuple<>()); 2022-12-29T03:35:17,753 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,753 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:17,754 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:17,754 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,754 502 | std::tuple(__k), 2022-12-29T03:35:17,754 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,754 503 | std::tuple<>()); 2022-12-29T03:35:17,754 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,755 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:17,755 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:17,755 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,755 502 | std::tuple(__k), 2022-12-29T03:35:17,755 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,755 503 | std::tuple<>()); 2022-12-29T03:35:17,755 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,756 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:17,756 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:17,756 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,756 502 | std::tuple(__k), 2022-12-29T03:35:17,756 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,756 503 | std::tuple<>()); 2022-12-29T03:35:17,756 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,757 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:35:17,757 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:35:17,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,757 502 | std::tuple(__k), 2022-12-29T03:35:17,757 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,757 503 | std::tuple<>()); 2022-12-29T03:35:17,757 | ~~~~~~~~~~~~~~~ 2022-12-29T03:35:17,758 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:35:17,758 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2022-12-29T03:35:17,758 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:35:17,758 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:35:17,758 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:21,302 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistDoublet.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o -O3 -std=c++11 -c 2022-12-29T03:35:26,315 trisicell/external/scistree/ScistDoublet.cpp:744:15: warning: ‘std::string GetNonDoubleName(const string&)’ defined but not used [-Wunused-function] 2022-12-29T03:35:26,315 744 | static string GetNonDoubleName(const string &strTaxon) 2022-12-29T03:35:26,315 | ^~~~~~~~~~~~~~~~ 2022-12-29T03:35:30,942 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:35:30,942 from trisicell/external/scistree/ScistDoublet.hpp:12, 2022-12-29T03:35:30,942 from trisicell/external/scistree/ScistDoublet.cpp:9: 2022-12-29T03:35:30,942 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2022-12-29T03:35:30,942 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-12-29T03:35:30,942 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:35:30,943 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:35:31,239 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:35:31,239 from trisicell/external/scistree/ScistDoublet.hpp:12, 2022-12-29T03:35:31,239 from trisicell/external/scistree/ScistDoublet.cpp:9: 2022-12-29T03:35:31,239 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistDoublet::ConsDPTblDoubletNodes(const std::map&, const std::map&, int, ScistPerfPhyClusTreeNode*, std::map > >&) const’: 2022-12-29T03:35:31,239 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2022-12-29T03:35:31,239 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:35:31,239 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:35:31,241 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2022-12-29T03:35:31,241 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:35:31,241 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:35:31,243 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2022-12-29T03:35:31,243 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:35:31,243 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:35:31,246 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2022-12-29T03:35:31,246 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:35:31,246 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:35:37,140 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistErrRateInf.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o -O3 -std=c++11 -c 2022-12-29T03:35:41,968 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistGenotype.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o -O3 -std=c++11 -c 2022-12-29T03:35:58,531 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyImp.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o -O3 -std=c++11 -c 2022-12-29T03:36:12,054 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:36:12,054 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2022-12-29T03:36:12,054 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2022-12-29T03:36:12,054 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:36:12,055 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:36:12,055 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:36:12,055 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:12,177 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:36:12,177 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2022-12-29T03:36:12,177 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2022-12-29T03:36:12,178 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistPerfPhyMLE::Init()’: 2022-12-29T03:36:12,178 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:12,178 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:12,178 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:12,384 /usr/include/c++/10/bits/stl_vector.h: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteGeno(int, ScistPerfPhyCluster&, ScistPerfPhyCluster&) const’: 2022-12-29T03:36:12,384 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:12,384 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:12,384 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:12,385 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:12,385 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:12,385 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:12,385 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:12,385 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:12,385 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:12,385 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:12,386 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:12,386 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:13,007 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:36:13,007 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2022-12-29T03:36:13,007 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2022-12-29T03:36:13,008 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:36:13,008 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:36:13,008 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:36:13,008 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:13,064 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteHap(int, ScistPerfPhyCluster&) const’: 2022-12-29T03:36:13,064 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:13,064 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:36:13,065 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:13,182 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbForSiteHap(int, double, const std::vector >&) const’: 2022-12-29T03:36:13,182 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:13,182 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:36:13,183 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:13,671 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:36:13,671 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2022-12-29T03:36:13,671 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2022-12-29T03:36:13,671 /usr/include/c++/10/bits/stl_vector.h: In constructor ‘ScistPerfPhyProbOnTree::ScistPerfPhyProbOnTree(ScistGenGenotypeMat&, MarginalTree&)’: 2022-12-29T03:36:13,671 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:36:13,672 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:36:13,672 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:36:19,047 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o -O3 -std=c++11 -c 2022-12-29T03:36:27,514 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/TreeBuilder.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o -O3 -std=c++11 -c 2022-12-29T03:36:35,376 In file included from /usr/include/c++/10/map:60, 2022-12-29T03:36:35,376 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:35,376 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:35,376 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2022-12-29T03:36:35,376 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,376 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:36:35,377 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,458 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:36:35,458 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:35,458 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:35,458 /usr/include/c++/10/bits/stl_map.h: In member function ‘double PhyloDistance::GetDistance(int, int) const’: 2022-12-29T03:36:35,459 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,459 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,459 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,459 502 | std::tuple(__k), 2022-12-29T03:36:35,459 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,459 503 | std::tuple<>()); 2022-12-29T03:36:35,459 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,460 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,460 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,461 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,461 502 | std::tuple(__k), 2022-12-29T03:36:35,461 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,461 503 | std::tuple<>()); 2022-12-29T03:36:35,461 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,707 In file included from /usr/include/c++/10/map:60, 2022-12-29T03:36:35,707 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:35,707 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:35,707 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2022-12-29T03:36:35,708 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,708 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:36:35,708 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,836 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:36:35,836 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:35,836 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:35,836 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::NJFindNgbrs(int, std::set&, int&, int&)’: 2022-12-29T03:36:35,836 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,836 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,836 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,837 502 | std::tuple(__k), 2022-12-29T03:36:35,837 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,837 503 | std::tuple<>()); 2022-12-29T03:36:35,837 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,838 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,838 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,838 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,838 502 | std::tuple(__k), 2022-12-29T03:36:35,838 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,838 503 | std::tuple<>()); 2022-12-29T03:36:35,839 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,839 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,840 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,840 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,840 502 | std::tuple(__k), 2022-12-29T03:36:35,840 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,840 503 | std::tuple<>()); 2022-12-29T03:36:35,840 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,841 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,841 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,841 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,841 502 | std::tuple(__k), 2022-12-29T03:36:35,841 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,842 503 | std::tuple<>()); 2022-12-29T03:36:35,842 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,842 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,843 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,843 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,843 502 | std::tuple(__k), 2022-12-29T03:36:35,843 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,843 503 | std::tuple<>()); 2022-12-29T03:36:35,843 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,844 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:35,844 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:35,844 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,844 502 | std::tuple(__k), 2022-12-29T03:36:35,844 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:35,845 503 | std::tuple<>()); 2022-12-29T03:36:35,845 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:38,347 In file included from /usr/include/c++/10/map:60, 2022-12-29T03:36:38,347 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:38,347 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:38,348 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >, std::set, std::allocator > >&>, std::tuple<>}; _Key = std::pair, std::set >; _Val = std::pair, std::set >, double>; _KeyOfValue = std::_Select1st, std::set >, double> >; _Compare = std::less, std::set > >; _Alloc = std::allocator, std::set >, double> >]’: 2022-12-29T03:36:38,348 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:38,348 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:36:38,348 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,006 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:36:39,007 from trisicell/external/scistree/TreeBuilder.h:13, 2022-12-29T03:36:39,007 from trisicell/external/scistree/TreeBuilder.cpp:9: 2022-12-29T03:36:39,007 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::SetDistForTwoClusters(const std::set&, const std::set&, double)’: 2022-12-29T03:36:39,007 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:39,007 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:39,007 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,007 502 | std::tuple(__k), 2022-12-29T03:36:39,008 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,008 503 | std::tuple<>()); 2022-12-29T03:36:39,008 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,197 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::UpdateDistUPGMA(const std::set&, const std::set&)’: 2022-12-29T03:36:39,198 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:39,198 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:39,198 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,198 502 | std::tuple(__k), 2022-12-29T03:36:39,198 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,198 503 | std::tuple<>()); 2022-12-29T03:36:39,198 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,200 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:39,200 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:39,200 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,201 502 | std::tuple(__k), 2022-12-29T03:36:39,201 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,201 503 | std::tuple<>()); 2022-12-29T03:36:39,201 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,727 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::UpdateDistUPGMA(const std::pair, std::set >&, const std::map, std::pair, double> >&, std::map, std::set >, double>&)’: 2022-12-29T03:36:39,727 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:39,728 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:39,728 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,728 502 | std::tuple(__k), 2022-12-29T03:36:39,728 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,728 503 | std::tuple<>()); 2022-12-29T03:36:39,728 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,730 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:36:39,730 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:36:39,730 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,730 502 | std::tuple(__k), 2022-12-29T03:36:39,730 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:36:39,731 503 | std::tuple<>()); 2022-12-29T03:36:39,731 | ~~~~~~~~~~~~~~~ 2022-12-29T03:36:45,105 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UnWeightedGraph.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o -O3 -std=c++11 -c 2022-12-29T03:36:55,106 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o -O3 -std=c++11 -c 2022-12-29T03:36:56,348 trisicell/external/scistree/Utils.cpp: In function ‘void DumpIntVec(const std::vector&)’: 2022-12-29T03:36:56,348 trisicell/external/scistree/Utils.cpp:175:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,348 175 | for(int i=0; i&, const std::vector&)’: 2022-12-29T03:36:56,350 trisicell/external/scistree/Utils.cpp:186:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,350 186 | for(int i=0; i&, const std::vector&)’: 2022-12-29T03:36:56,352 trisicell/external/scistree/Utils.cpp:216:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,352 216 | for(int i=0; i&, const std::vector&)’: 2022-12-29T03:36:56,382 trisicell/external/scistree/Utils.cpp:239:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,382 239 | for(int i=0; i&)’: 2022-12-29T03:36:56,386 trisicell/external/scistree/Utils.cpp:335:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,386 335 | for(int i=0; i&, const std::vector&)’: 2022-12-29T03:36:56,387 trisicell/external/scistree/Utils.cpp:389:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,387 389 | for(int j=i+1; j&, std::vector&)’: 2022-12-29T03:36:56,397 trisicell/external/scistree/Utils.cpp:634:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,397 634 | if(pos >= posvec.size() || i < posvec[pos] ) 2022-12-29T03:36:56,398 | ~~~~^~~~~~~~~~~~~~~~ 2022-12-29T03:36:56,407 trisicell/external/scistree/Utils.cpp: In function ‘void GetIntVec(int, const std::vector&, std::vector&)’: 2022-12-29T03:36:56,408 trisicell/external/scistree/Utils.cpp:657:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,408 657 | if(pos >= posvec.size() || i < posvec[pos] ) 2022-12-29T03:36:56,408 | ~~~~^~~~~~~~~~~~~~~~ 2022-12-29T03:36:56,459 trisicell/external/scistree/Utils.cpp: In function ‘bool GetNextPermutation(std::vector&, const std::vector&)’: 2022-12-29T03:36:56,459 trisicell/external/scistree/Utils.cpp:856:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,459 856 | for(int j=i+1; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,463 1003 | for(int i=brPt+1; i < s2.size(); ++i) 2022-12-29T03:36:56,464 | ~~^~~~~~~~~~~ 2022-12-29T03:36:56,474 trisicell/external/scistree/Utils.cpp: In function ‘void AddUniqueSeqToVec(const SEQUENCE&, std::vector >&)’: 2022-12-29T03:36:56,474 trisicell/external/scistree/Utils.cpp:1084:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,474 1084 | for(int i=0; i >&)’: 2022-12-29T03:36:56,475 trisicell/external/scistree/Utils.cpp:1096:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,475 1096 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,477 1124 | if(seedPos < 0 || seedPos >= seq1.size() ) 2022-12-29T03:36:56,477 | ~~~~~~~~^~~~~~~~~~~~~~ 2022-12-29T03:36:56,477 trisicell/external/scistree/Utils.cpp:1144:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,478 1144 | for(i=seedPos+1; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,478 1151 | if( i< seq1.size() ) 2022-12-29T03:36:56,478 | ~^~~~~~~~~~~~~ 2022-12-29T03:36:56,479 trisicell/external/scistree/Utils.cpp: In function ‘int IsSeqsMutPair(const SEQUENCE&, const SEQUENCE&)’: 2022-12-29T03:36:56,479 trisicell/external/scistree/Utils.cpp:1183:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,479 1183 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,480 1205 | for(int i=0; i&, const std::vector&, bool&)’: 2022-12-29T03:36:56,482 trisicell/external/scistree/Utils.cpp:1244:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,482 1244 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,483 1258 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,483 1274 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,484 1303 | for(int i=0; i&, std::vector&, std::vector&)’: 2022-12-29T03:36:56,485 trisicell/external/scistree/Utils.cpp:1357:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,485 1357 | for(int i=0; i&, const std::vector&)’: 2022-12-29T03:36:56,487 trisicell/external/scistree/Utils.cpp:1405:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,487 1405 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,487 1409 | for(int i=0; i&, std::vector&)’: 2022-12-29T03:36:56,488 trisicell/external/scistree/Utils.cpp:1440:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:36:56,488 1440 | for(int i=0; i&, std::set&)’ defined but not used [-Wunused-function] 2022-12-29T03:36:57,067 10 | static void MakeComplementSet( int start, int end, 2022-12-29T03:36:57,067 | ^~~~~~~~~~~~~~~~~ 2022-12-29T03:37:01,963 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils2.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o -O3 -std=c++11 -c 2022-12-29T03:37:06,134 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils3.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o -O3 -std=c++11 -c 2022-12-29T03:37:15,531 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:37:15,532 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:15,532 from trisicell/external/scistree/Utils3.cpp:2: 2022-12-29T03:37:15,532 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:37:15,532 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:37:15,532 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:37:15,532 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:15,566 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:37:15,566 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:15,566 from trisicell/external/scistree/Utils3.cpp:2: 2022-12-29T03:37:15,566 /usr/include/c++/10/bits/stl_vector.h: In function ‘double GetLogSumOfTwo(double, double)’: 2022-12-29T03:37:15,566 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:15,566 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:15,567 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:15,567 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:15,567 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:15,567 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:18,700 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils4.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o -O3 -std=c++11 -c 2022-12-29T03:37:24,943 In file included from /usr/include/c++/10/set:60, 2022-12-29T03:37:24,944 from trisicell/external/scistree/Utils3.h:6, 2022-12-29T03:37:24,944 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:24,944 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:24,944 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2022-12-29T03:37:24,944 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:37:24,945 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2022-12-29T03:37:24,945 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:26,635 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:37:26,635 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:26,635 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:26,635 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:26,635 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:37:26,636 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:37:26,636 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:37:26,636 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:26,669 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:37:26,669 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:26,669 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:26,669 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:26,669 /usr/include/c++/10/bits/stl_vector.h: In function ‘void FindEvenDistriPoints(double, double, double, int, std::vector&)’: 2022-12-29T03:37:26,669 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:26,670 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:26,670 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:27,009 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:37:27,009 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:27,009 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:27,009 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:27,010 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2022-12-29T03:37:27,010 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2022-12-29T03:37:27,010 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:37:27,010 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,247 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:37:27,247 from trisicell/external/scistree/Utils3.h:5, 2022-12-29T03:37:27,247 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:27,248 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:27,248 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ClusterLinearPoints(const std::vector&, double, std::vector&)’: 2022-12-29T03:37:27,248 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2022-12-29T03:37:27,248 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:27,248 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:27,250 In file included from /usr/include/c++/10/map:61, 2022-12-29T03:37:27,250 from trisicell/external/scistree/Utils3.h:7, 2022-12-29T03:37:27,250 from trisicell/external/scistree/Utils4.h:12, 2022-12-29T03:37:27,250 from trisicell/external/scistree/Utils4.cpp:9: 2022-12-29T03:37:27,251 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:37:27,251 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:37:27,251 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,251 502 | std::tuple(__k), 2022-12-29T03:37:27,251 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,251 503 | std::tuple<>()); 2022-12-29T03:37:27,251 | ~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,252 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:37:27,252 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:37:27,252 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,252 502 | std::tuple(__k), 2022-12-29T03:37:27,252 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,252 503 | std::tuple<>()); 2022-12-29T03:37:27,252 | ~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,253 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:37:27,253 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:37:27,253 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,253 502 | std::tuple(__k), 2022-12-29T03:37:27,253 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,253 503 | std::tuple<>()); 2022-12-29T03:37:27,254 | ~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,254 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2022-12-29T03:37:27,254 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2022-12-29T03:37:27,254 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,254 502 | std::tuple(__k), 2022-12-29T03:37:27,254 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:27,254 503 | std::tuple<>()); 2022-12-29T03:37:27,255 | ~~~~~~~~~~~~~~~ 2022-12-29T03:37:30,791 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UtilsNumerical.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o -O3 -std=c++11 -c 2022-12-29T03:37:32,497 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -O3 -std=c++11 -c 2022-12-29T03:37:39,917 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so 2022-12-29T03:37:41,994 building 'trisicell.external._scite' extension 2022-12-29T03:37:41,995 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scite 2022-12-29T03:37:41,996 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/_scite.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scite.o -O3 -std=c++11 -c 2022-12-29T03:37:43,584 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/findBestTrees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.o -O3 -std=c++11 -c 2022-12-29T03:37:44,658 trisicell/external/scite/findBestTrees.cpp: In function ‘int* getParentVectorFromGVfile(std::string, int)’: 2022-12-29T03:37:44,658 trisicell/external/scite/findBestTrees.cpp:206:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,658 206 | for(int i=0; i < lines.size(); i++){ 2022-12-29T03:37:44,658 | ~~^~~~~~~~~~~~~~ 2022-12-29T03:37:44,669 trisicell/external/scite/findBestTrees.cpp: In function ‘int getMinDist(int*, std::vector, int)’: 2022-12-29T03:37:44,669 trisicell/external/scite/findBestTrees.cpp:222:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,669 222 | for(int i=0; i setMoveProbs()’: 2022-12-29T03:37:44,684 trisicell/external/scite/findBestTrees.cpp:356:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,684 356 | for(int i=0; i< treeMoves.size(); i++){ sum += treeMoves[i]; } 2022-12-29T03:37:44,684 | ~^~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:44,685 trisicell/external/scite/findBestTrees.cpp:359:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,686 359 | for(int i=0; i< treeMoves.size(); i++){ 2022-12-29T03:37:44,686 | ~^~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:44,687 trisicell/external/scite/findBestTrees.cpp:363:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,687 363 | for(int i=0; i< treeMoves.size(); i++){ cout << " " << treeMoves[i];} 2022-12-29T03:37:44,687 | ~^~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:44,689 trisicell/external/scite/findBestTrees.cpp:366:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:44,689 366 | for(int i=0; i< treeMoves.size(); i++){ 2022-12-29T03:37:44,689 | ~^~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:46,323 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:37:46,323 from trisicell/external/scite/findBestTrees.cpp:9: 2022-12-29T03:37:46,323 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:37:46,323 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:37:46,323 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:37:46,324 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:46,386 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:37:46,386 from trisicell/external/scite/findBestTrees.cpp:9: 2022-12-29T03:37:46,386 /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector setMoveProbs()’: 2022-12-29T03:37:46,387 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,387 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,387 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,387 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,388 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,388 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,388 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,388 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,389 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,389 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,389 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,389 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,390 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,390 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,390 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,390 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,391 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,391 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,392 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,392 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:37:46,392 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:37:46,470 In file included from /usr/include/c++/10/vector:72, 2022-12-29T03:37:46,470 from trisicell/external/scite/findBestTrees.cpp:9: 2022-12-29T03:37:46,470 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:37:46,470 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:37:46,471 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:37:46,471 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:46,471 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:37:46,500 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2022-12-29T03:37:46,500 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:37:46,500 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2022-12-29T03:37:46,501 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2022-12-29T03:37:49,918 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/matrices.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/matrices.o -O3 -std=c++11 -c 2022-12-29T03:37:51,710 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmc.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.o -O3 -std=c++11 -c 2022-12-29T03:37:53,072 trisicell/external/scite/mcmc.cpp: In function ‘std::string runMCMCbeta(std::vector&, double*, int, int, double, std::vector, int, int, int**, char, int*, int, bool, double, double, bool, char)’: 2022-12-29T03:37:53,072 trisicell/external/scite/mcmc.cpp:87:15: warning: variable ‘moveAccepted’ set but not used [-Wunused-but-set-variable] 2022-12-29T03:37:53,073 87 | bool moveAccepted = false; // Is the MCMC move accepted? 2022-12-29T03:37:53,073 | ^~~~~~~~~~~~ 2022-12-29T03:37:54,184 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcBinTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.o -O3 -std=c++11 -c 2022-12-29T03:37:55,286 trisicell/external/scite/mcmcBinTreeMove.cpp: In function ‘int pickNodeToMove(int*, int)’: 2022-12-29T03:37:55,287 trisicell/external/scite/mcmcBinTreeMove.cpp:75:1: warning: control reaches end of non-void function [-Wreturn-type] 2022-12-29T03:37:55,287 75 | } 2022-12-29T03:37:55,287 | ^ 2022-12-29T03:37:55,620 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.o -O3 -std=c++11 -c 2022-12-29T03:37:56,998 trisicell/external/scite/mcmcTreeMove.cpp: In function ‘bool** getNewAncMatrix(bool**, int, std::vector, std::vector, int, bool**)’: 2022-12-29T03:37:56,998 trisicell/external/scite/mcmcTreeMove.cpp:177:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:56,998 177 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:56,999 178 | for(int j=0; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:57,000 185 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:57,001 186 | for(int j=0; j, int, int, double**, int**)’: 2022-12-29T03:37:58,726 trisicell/external/scite/output.cpp:298:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:58,727 298 | for(int i=0; i, int, std::string)’: 2022-12-29T03:37:58,738 trisicell/external/scite/output.cpp:320:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:37:58,739 320 | for(int i=0; i)’: 2022-12-29T03:38:03,288 trisicell/external/scite/rand.cpp:53:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:03,288 53 | for(int i=1; i)’: 2022-12-29T03:38:03,298 trisicell/external/scite/rand.cpp:96:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:03,298 96 | if (index != queue.size() - 1) 2022-12-29T03:38:03,298 | ~~~~~~^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:38:03,302 trisicell/external/scite/rand.cpp: In function ‘int* getRandomBinaryTree(int)’: 2022-12-29T03:38:03,302 trisicell/external/scite/rand.cpp:119:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:03,302 119 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2022-12-29T03:38:03,302 | ~~~~^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:38:03,303 trisicell/external/scite/rand.cpp:125:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:03,303 125 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2022-12-29T03:38:03,303 | ~~~~^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:38:03,793 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/scoreBinTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.o -O3 -std=c++11 -c 2022-12-29T03:38:04,786 trisicell/external/scite/scoreBinTree.cpp: In function ‘double getBinTreeScore(int**, int, int, double**, int*)’: 2022-12-29T03:38:04,786 trisicell/external/scite/scoreBinTree.cpp:78:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:04,787 78 | for(int i=0; i&, int)’: 2022-12-29T03:38:07,849 trisicell/external/scite/treelist.cpp:51:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:07,849 51 | for(int i=0; i&, int)’: 2022-12-29T03:38:07,858 trisicell/external/scite/treelist.cpp:59:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:07,859 59 | for(int i=0; i&, int*, int)’: 2022-12-29T03:38:07,859 trisicell/external/scite/treelist.cpp:75:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:07,859 75 | for(int k=0; k::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const treeBeta&}; _Tp = treeBeta; _Alloc = std::allocator]’: 2022-12-29T03:38:08,106 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:38:08,106 426 | vector<_Tp, _Alloc>:: 2022-12-29T03:38:08,106 | ^~~~~~~~~~~~~~~~~~~ 2022-12-29T03:38:08,106 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2022-12-29T03:38:08,154 In file included from /usr/include/c++/10/vector:67, 2022-12-29T03:38:08,155 from trisicell/external/scite/treelist.cpp:10: 2022-12-29T03:38:08,155 /usr/include/c++/10/bits/stl_vector.h: In function ‘void resetTreeList(std::vector&, int*, int, double)’: 2022-12-29T03:38:08,155 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:38:08,155 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:38:08,155 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:38:08,169 /usr/include/c++/10/bits/stl_vector.h: In function ‘void updateTreeList(std::vector&, int*, int, double, double, double)’: 2022-12-29T03:38:08,170 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2022-12-29T03:38:08,170 1198 | _M_realloc_insert(end(), __x); 2022-12-29T03:38:08,170 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2022-12-29T03:38:08,277 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/trees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/trees.o -O3 -std=c++11 -c 2022-12-29T03:38:09,341 trisicell/external/scite/trees.cpp: In function ‘int countBranches(int*, int)’: 2022-12-29T03:38:09,341 trisicell/external/scite/trees.cpp:55:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,342 55 | for(int i=0; i >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,342 58 | for(int i=0; i >&)’: 2022-12-29T03:38:09,343 trisicell/external/scite/trees.cpp:76:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,344 76 | for(int i=0; i >, int)’: 2022-12-29T03:38:09,346 trisicell/external/scite/trees.cpp:90:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,346 90 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,350 114 | for(int j=0; j >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2022-12-29T03:38:09,350 118 | for(int i=0; i build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,241 copying build/lib.linux-armv7l-cpython-39/tests/test_logging.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,244 copying build/lib.linux-armv7l-cpython-39/tests/test_commands.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,246 copying build/lib.linux-armv7l-cpython-39/tests/test_pl.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,249 copying build/lib.linux-armv7l-cpython-39/tests/_helpers.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,251 copying build/lib.linux-armv7l-cpython-39/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,252 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,255 copying build/lib.linux-armv7l-cpython-39/tests/test_ul.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,257 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_scores.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,259 copying build/lib.linux-armv7l-cpython-39/tests/test_pp.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,261 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_consensus.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,264 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_partition_function.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,266 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers_tmp.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,268 copying build/lib.linux-armv7l-cpython-39/tests/test_io.py -> build/bdist.linux-armv7l/wheel/tests 2022-12-29T03:38:11,270 creating build/bdist.linux-armv7l/wheel/trisicell 2022-12-29T03:38:11,272 creating build/bdist.linux-armv7l/wheel/trisicell/settings 2022-12-29T03:38:11,273 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2022-12-29T03:38:11,276 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/_settings.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2022-12-29T03:38:11,278 creating build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,279 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_hclustering.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,282 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,285 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_servers.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,287 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_packages.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,289 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,291 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_utils.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2022-12-29T03:38:11,295 creating build/bdist.linux-armv7l/wheel/trisicell/logging 2022-12-29T03:38:11,296 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/_logging.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2022-12-29T03:38:11,298 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2022-12-29T03:38:11,301 creating build/bdist.linux-armv7l/wheel/trisicell/datasets 2022-12-29T03:38:11,301 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2022-12-29T03:38:11,304 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_simulate.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2022-12-29T03:38:11,307 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,308 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia6.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,312 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia3.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,316 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/myeloproliferative_neoplasms18.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,319 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/muscle_invasive_bladder.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,326 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia2.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,330 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/ovarian.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,701 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia5.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,705 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.rc.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,710 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,714 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia4.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,718 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/oligodendroglioma_idh_mutated_tumor.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,726 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/myeloproliferative_neoplasms78.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,729 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/erbc.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,732 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/renal_cell_carcinoma.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,735 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal1.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,738 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/acute_lymphocytic_leukemia1.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,741 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/melanoma20.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,762 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/tnbc.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,764 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/myeloproliferative_neoplasms712.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2022-12-29T03:38:11,780 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,781 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,785 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/test.tsv -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,787 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,788 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,795 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,801 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,804 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,815 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,819 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,823 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2022-12-29T03:38:11,840 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,844 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,845 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,847 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,849 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,851 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,853 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,856 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,858 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,860 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,862 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,864 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,866 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,868 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,870 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,872 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,874 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,876 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,878 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,881 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,883 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,885 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2022-12-29T03:38:11,887 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling_config.yml -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,889 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T06.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,892 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T00.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2022-12-29T03:38:11,895 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_datasets.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2022-12-29T03:38:11,898 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2022-12-29T03:38:11,899 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/sublines_wes.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2022-12-29T03:38:11,948 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/expression.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2022-12-29T03:38:12,114 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/genotype.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2022-12-29T03:38:12,122 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/sublines_scrnaseq.h5md.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2022-12-29T03:38:12,560 creating build/bdist.linux-armv7l/wheel/trisicell/tl 2022-12-29T03:38:12,561 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,563 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2022-12-29T03:38:12,564 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2022-12-29T03:38:12,568 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2022-12-29T03:38:12,570 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cellphy.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,573 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,575 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,576 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,579 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,581 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_dependencies.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,583 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,586 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_subsamples.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2022-12-29T03:38:12,588 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,590 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_dendro.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,593 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scelestial.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,595 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,597 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,600 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,603 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,606 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,608 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sciphi.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,610 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cardelino.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,612 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sbm.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,614 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,617 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sasc.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,619 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,621 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2022-12-29T03:38:12,623 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl 2022-12-29T03:38:12,626 creating build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2022-12-29T03:38:12,627 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2022-12-29T03:38:12,629 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2022-12-29T03:38:12,631 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus_day.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2022-12-29T03:38:12,634 creating build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2022-12-29T03:38:12,635 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2022-12-29T03:38:12,637 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_pf.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2022-12-29T03:38:12,640 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_clt_sampler.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2022-12-29T03:38:12,642 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_partition_function.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2022-12-29T03:38:12,645 creating build/bdist.linux-armv7l/wheel/trisicell/tl/score 2022-12-29T03:38:12,646 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2022-12-29T03:38:12,648 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_others.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2022-12-29T03:38:12,651 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_ours.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2022-12-29T03:38:12,654 creating build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2022-12-29T03:38:12,655 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2022-12-29T03:38:12,657 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/_fitch.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2022-12-29T03:38:12,660 creating build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2022-12-29T03:38:12,661 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2022-12-29T03:38:12,663 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/_cna.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2022-12-29T03:38:12,666 copying build/lib.linux-armv7l-cpython-39/trisicell/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell 2022-12-29T03:38:12,668 creating build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,670 creating build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,671 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,673 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_nh2lgf.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,676 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,678 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,681 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,683 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2022-12-29T03:38:12,686 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,691 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,697 creating build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,698 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,701 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,704 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,707 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,709 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,711 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,713 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,716 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,718 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,721 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,724 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,728 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,731 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,734 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,736 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,740 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,743 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,745 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,747 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,751 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,755 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,759 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,762 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,765 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,768 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,771 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,773 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,777 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ctpl_stl.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,780 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,782 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,785 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,788 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,791 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,794 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,800 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,803 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,805 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,808 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,811 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,813 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,816 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,818 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,821 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2022-12-29T03:38:12,823 copying build/lib.linux-armv7l-cpython-39/trisicell/external/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,825 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,827 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mp3.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,830 creating build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2022-12-29T03:38:12,831 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2022-12-29T03:38:12,834 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2022-12-29T03:38:12,836 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:12,874 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,350 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,352 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,358 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,376 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,379 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_betabinom.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,382 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,396 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,399 creating build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2022-12-29T03:38:13,400 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2022-12-29T03:38:13,403 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.h -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2022-12-29T03:38:13,406 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2022-12-29T03:38:13,412 creating build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,413 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,416 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,419 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,421 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,424 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,427 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,429 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,432 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,434 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,437 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,439 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,442 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,445 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,447 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,450 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,452 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,455 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,457 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,459 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,462 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,464 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,467 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2022-12-29T03:38:13,471 creating build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,533 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,536 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/trisicell.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,538 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,541 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,544 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,546 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,549 creating build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,551 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s07merging.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,553 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z01status.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,556 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,558 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s10velocitying.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,560 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s04mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,563 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s02mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,566 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s09expressing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,569 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s03indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,572 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s08annotating.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,574 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s06jointcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,577 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z03clean.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,579 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s05calling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,582 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z02matrixing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,585 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s01indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2022-12-29T03:38:13,587 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,590 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,592 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,594 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,596 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,599 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_mcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,601 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,604 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,606 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_score.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,608 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_search.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,610 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,612 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_partf.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,614 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2022-12-29T03:38:13,617 creating build/bdist.linux-armv7l/wheel/trisicell/pl 2022-12-29T03:38:13,618 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_helper.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2022-12-29T03:38:13,621 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2022-12-29T03:38:13,623 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2022-12-29T03:38:13,626 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_data.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2022-12-29T03:38:13,628 creating build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,629 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_bifiltering.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,631 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_binary.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,633 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,636 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,638 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_readcount.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2022-12-29T03:38:13,641 creating build/bdist.linux-armv7l/wheel/trisicell/io 2022-12-29T03:38:13,642 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_genotype.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2022-12-29T03:38:13,644 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2022-12-29T03:38:13,646 copying build/lib.linux-armv7l-cpython-39/trisicell/io/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2022-12-29T03:38:13,648 running install_egg_info 2022-12-29T03:38:13,659 Copying trisicell.egg-info to build/bdist.linux-armv7l/wheel/trisicell-0.1.1-py3.9.egg-info 2022-12-29T03:38:13,673 running install_scripts 2022-12-29T03:38:13,836 creating build/bdist.linux-armv7l/wheel/trisicell-0.1.1.dist-info/WHEEL 2022-12-29T03:38:13,839 creating '/tmp/pip-wheel-ac9c01p3/.tmp-9tpimqhu/trisicell-0.1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-29T03:38:13,842 adding 'tests/__init__.py' 2022-12-29T03:38:13,843 adding 'tests/_helpers.py' 2022-12-29T03:38:13,844 adding 'tests/test_commands.py' 2022-12-29T03:38:13,846 adding 'tests/test_datasets.py' 2022-12-29T03:38:13,847 adding 'tests/test_io.py' 2022-12-29T03:38:13,848 adding 'tests/test_logging.py' 2022-12-29T03:38:13,850 adding 'tests/test_pl.py' 2022-12-29T03:38:13,851 adding 'tests/test_pp.py' 2022-12-29T03:38:13,852 adding 'tests/test_tl_consensus.py' 2022-12-29T03:38:13,853 adding 'tests/test_tl_partition_function.py' 2022-12-29T03:38:13,855 adding 'tests/test_tl_scores.py' 2022-12-29T03:38:13,856 adding 'tests/test_tl_solvers.py' 2022-12-29T03:38:13,858 adding 'tests/test_tl_solvers_tmp.py' 2022-12-29T03:38:13,859 adding 'tests/test_ul.py' 2022-12-29T03:38:13,861 adding 'trisicell/__init__.py' 2022-12-29T03:38:13,863 adding 'trisicell/commands/__init__.py' 2022-12-29T03:38:13,864 adding 'trisicell/commands/_bnb.py' 2022-12-29T03:38:13,866 adding 'trisicell/commands/_booster.py' 2022-12-29T03:38:13,867 adding 'trisicell/commands/_consensus.py' 2022-12-29T03:38:13,868 adding 'trisicell/commands/_gpps.py' 2022-12-29T03:38:13,870 adding 'trisicell/commands/_grmt.py' 2022-12-29T03:38:13,871 adding 'trisicell/commands/_huntress.py' 2022-12-29T03:38:13,873 adding 'trisicell/commands/_mcalling.py' 2022-12-29T03:38:13,874 adding 'trisicell/commands/_onconem.py' 2022-12-29T03:38:13,875 adding 'trisicell/commands/_partf.py' 2022-12-29T03:38:13,877 adding 'trisicell/commands/_phiscs.py' 2022-12-29T03:38:13,878 adding 'trisicell/commands/_scistree.py' 2022-12-29T03:38:13,880 adding 'trisicell/commands/_scite.py' 2022-12-29T03:38:13,881 adding 'trisicell/commands/_score.py' 2022-12-29T03:38:13,882 adding 'trisicell/commands/_search.py' 2022-12-29T03:38:13,884 adding 'trisicell/commands/_siclonefit.py' 2022-12-29T03:38:13,885 adding 'trisicell/commands/_sphyr.py' 2022-12-29T03:38:13,886 adding 'trisicell/commands/_trees.py' 2022-12-29T03:38:13,888 adding 'trisicell/commands/trisicell.py' 2022-12-29T03:38:13,890 adding 'trisicell/commands/mcalling/__init__.py' 2022-12-29T03:38:13,891 adding 'trisicell/commands/mcalling/s01indexing.py' 2022-12-29T03:38:13,893 adding 'trisicell/commands/mcalling/s02mapping.py' 2022-12-29T03:38:13,894 adding 'trisicell/commands/mcalling/s03indexing.py' 2022-12-29T03:38:13,896 adding 'trisicell/commands/mcalling/s04mapping.py' 2022-12-29T03:38:13,897 adding 'trisicell/commands/mcalling/s05calling.py' 2022-12-29T03:38:13,899 adding 'trisicell/commands/mcalling/s06jointcalling.py' 2022-12-29T03:38:13,900 adding 'trisicell/commands/mcalling/s07merging.py' 2022-12-29T03:38:13,901 adding 'trisicell/commands/mcalling/s08annotating.py' 2022-12-29T03:38:13,903 adding 'trisicell/commands/mcalling/s09expressing.py' 2022-12-29T03:38:13,904 adding 'trisicell/commands/mcalling/s10velocitying.py' 2022-12-29T03:38:13,905 adding 'trisicell/commands/mcalling/z01status.py' 2022-12-29T03:38:13,907 adding 'trisicell/commands/mcalling/z02matrixing.py' 2022-12-29T03:38:13,909 adding 'trisicell/commands/mcalling/z03clean.py' 2022-12-29T03:38:13,911 adding 'trisicell/datasets/__init__.py' 2022-12-29T03:38:13,913 adding 'trisicell/datasets/_datasets.py' 2022-12-29T03:38:13,915 adding 'trisicell/datasets/_simulate.py' 2022-12-29T03:38:14,963 adding 'trisicell/datasets/data/expression.h5ad.gz' 2022-12-29T03:38:15,037 adding 'trisicell/datasets/data/genotype.h5ad.gz' 2022-12-29T03:38:18,200 adding 'trisicell/datasets/data/sublines_scrnaseq.h5md.gz' 2022-12-29T03:38:18,641 adding 'trisicell/datasets/data/sublines_wes.h5ad.gz' 2022-12-29T03:38:18,659 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia1.h5ad' 2022-12-29T03:38:18,663 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia2.h5ad' 2022-12-29T03:38:18,671 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia3.h5ad' 2022-12-29T03:38:18,682 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia4.h5ad' 2022-12-29T03:38:18,692 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia5.h5ad' 2022-12-29T03:38:18,696 adding 'trisicell/datasets/real/acute_lymphocytic_leukemia6.h5ad' 2022-12-29T03:38:18,700 adding 'trisicell/datasets/real/colorectal1.h5ad' 2022-12-29T03:38:18,705 adding 'trisicell/datasets/real/colorectal2.h5ad' 2022-12-29T03:38:18,716 adding 'trisicell/datasets/real/colorectal2.rc.h5ad' 2022-12-29T03:38:18,719 adding 'trisicell/datasets/real/erbc.h5ad' 2022-12-29T03:38:18,762 adding 'trisicell/datasets/real/melanoma20.h5ad' 2022-12-29T03:38:18,783 adding 'trisicell/datasets/real/muscle_invasive_bladder.h5ad' 2022-12-29T03:38:18,787 adding 'trisicell/datasets/real/myeloproliferative_neoplasms18.h5ad' 2022-12-29T03:38:18,818 adding 'trisicell/datasets/real/myeloproliferative_neoplasms712.h5ad' 2022-12-29T03:38:18,826 adding 'trisicell/datasets/real/myeloproliferative_neoplasms78.h5ad' 2022-12-29T03:38:18,835 adding 'trisicell/datasets/real/oligodendroglioma_idh_mutated_tumor.h5ad' 2022-12-29T03:38:21,310 adding 'trisicell/datasets/real/ovarian.h5ad.gz' 2022-12-29T03:38:21,527 adding 'trisicell/datasets/real/renal_cell_carcinoma.h5ad' 2022-12-29T03:38:21,529 adding 'trisicell/datasets/real/tnbc.h5ad' 2022-12-29T03:38:21,532 adding 'trisicell/datasets/test/T00.nwk' 2022-12-29T03:38:21,533 adding 'trisicell/datasets/test/T06.nwk' 2022-12-29T03:38:21,535 adding 'trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix' 2022-12-29T03:38:21,538 adding 'trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix' 2022-12-29T03:38:21,539 adding 'trisicell/datasets/test/mcalling_config.yml' 2022-12-29T03:38:21,541 adding 'trisicell/datasets/test/test.tsv' 2022-12-29T03:38:21,578 adding 'trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix' 2022-12-29T03:38:21,586 adding 'trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix' 2022-12-29T03:38:21,660 adding 'trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix' 2022-12-29T03:38:21,670 adding 'trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix' 2022-12-29T03:38:21,677 adding 'trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix' 2022-12-29T03:38:21,697 adding 'trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix' 2022-12-29T03:38:21,717 adding 'trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix' 2022-12-29T03:38:21,720 adding 'trisicell/datasets/test/mcalling/cell0_1.fastq.gz' 2022-12-29T03:38:21,722 adding 'trisicell/datasets/test/mcalling/cell0_2.fastq.gz' 2022-12-29T03:38:21,723 adding 'trisicell/datasets/test/mcalling/cell1_1.fastq.gz' 2022-12-29T03:38:21,725 adding 'trisicell/datasets/test/mcalling/cell1_2.fastq.gz' 2022-12-29T03:38:21,726 adding 'trisicell/datasets/test/mcalling/cell2_1.fastq.gz' 2022-12-29T03:38:21,727 adding 'trisicell/datasets/test/mcalling/cell2_2.fastq.gz' 2022-12-29T03:38:21,729 adding 'trisicell/datasets/test/mcalling/cell3_1.fastq.gz' 2022-12-29T03:38:21,730 adding 'trisicell/datasets/test/mcalling/cell3_2.fastq.gz' 2022-12-29T03:38:21,732 adding 'trisicell/datasets/test/mcalling/cell4_1.fastq.gz' 2022-12-29T03:38:21,733 adding 'trisicell/datasets/test/mcalling/cell4_2.fastq.gz' 2022-12-29T03:38:21,734 adding 'trisicell/datasets/test/mcalling/cell5_1.fastq.gz' 2022-12-29T03:38:21,736 adding 'trisicell/datasets/test/mcalling/cell5_2.fastq.gz' 2022-12-29T03:38:21,737 adding 'trisicell/datasets/test/mcalling/cell6_1.fastq.gz' 2022-12-29T03:38:21,738 adding 'trisicell/datasets/test/mcalling/cell6_2.fastq.gz' 2022-12-29T03:38:21,740 adding 'trisicell/datasets/test/mcalling/cell7_1.fastq.gz' 2022-12-29T03:38:21,741 adding 'trisicell/datasets/test/mcalling/cell7_2.fastq.gz' 2022-12-29T03:38:21,743 adding 'trisicell/datasets/test/mcalling/cell8_1.fastq.gz' 2022-12-29T03:38:21,745 adding 'trisicell/datasets/test/mcalling/cell8_2.fastq.gz' 2022-12-29T03:38:21,746 adding 'trisicell/datasets/test/mcalling/cell9_1.fastq.gz' 2022-12-29T03:38:21,747 adding 'trisicell/datasets/test/mcalling/cell9_2.fastq.gz' 2022-12-29T03:38:21,749 adding 'trisicell/external/__init__.py' 2022-12-29T03:38:21,755 adding 'trisicell/external/_betabinom.py' 2022-12-29T03:38:21,768 adding 'trisicell/external/_mltd.cpp' 2022-12-29T03:38:21,908 adding 'trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so' 2022-12-29T03:38:21,914 adding 'trisicell/external/_mltd.pyx' 2022-12-29T03:38:21,916 adding 'trisicell/external/_mp3.py' 2022-12-29T03:38:21,928 adding 'trisicell/external/_scistree.cpp' 2022-12-29T03:38:26,007 adding 'trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so' 2022-12-29T03:38:26,540 adding 'trisicell/external/_scistree.pyx' 2022-12-29T03:38:26,546 adding 'trisicell/external/_scite.cpp' 2022-12-29T03:38:26,894 adding 'trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so' 2022-12-29T03:38:26,906 adding 'trisicell/external/_scite.pyx' 2022-12-29T03:38:26,917 adding 'trisicell/external/_scprob.cpp' 2022-12-29T03:38:27,021 adding 'trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so' 2022-12-29T03:38:27,027 adding 'trisicell/external/_scprob.pyx' 2022-12-29T03:38:27,028 adding 'trisicell/external/gpps/__init__.py' 2022-12-29T03:38:27,030 adding 'trisicell/external/gpps/_gpps_hc.py' 2022-12-29T03:38:27,032 adding 'trisicell/external/gpps/_gpps_ilp.py' 2022-12-29T03:38:27,033 adding 'trisicell/external/gpps/_nh2lgf.py' 2022-12-29T03:38:27,035 adding 'trisicell/external/gpps/_utils_hc.py' 2022-12-29T03:38:27,037 adding 'trisicell/external/gpps/_utils_ilp.py' 2022-12-29T03:38:27,039 adding 'trisicell/external/mltd/mltd.cpp' 2022-12-29T03:38:27,041 adding 'trisicell/external/mltd/mltd.h' 2022-12-29T03:38:27,047 adding 'trisicell/external/scistree/BinaryMatrix.cpp' 2022-12-29T03:38:27,049 adding 'trisicell/external/scistree/BinaryMatrix.h' 2022-12-29T03:38:27,053 adding 'trisicell/external/scistree/BioSequenceMatrix.cpp' 2022-12-29T03:38:27,055 adding 'trisicell/external/scistree/BioSequenceMatrix.h' 2022-12-29T03:38:27,057 adding 'trisicell/external/scistree/GenotypeMatrix.cpp' 2022-12-29T03:38:27,058 adding 'trisicell/external/scistree/GenotypeMatrix.h' 2022-12-29T03:38:27,070 adding 'trisicell/external/scistree/MarginalTree.cpp' 2022-12-29T03:38:27,072 adding 'trisicell/external/scistree/MarginalTree.h' 2022-12-29T03:38:27,075 adding 'trisicell/external/scistree/PhylogenyTree.cpp' 2022-12-29T03:38:27,077 adding 'trisicell/external/scistree/PhylogenyTree.h' 2022-12-29T03:38:27,097 adding 'trisicell/external/scistree/PhylogenyTreeBasic.cpp' 2022-12-29T03:38:27,101 adding 'trisicell/external/scistree/PhylogenyTreeBasic.h' 2022-12-29T03:38:27,110 adding 'trisicell/external/scistree/RBT.cpp' 2022-12-29T03:38:27,113 adding 'trisicell/external/scistree/RBT.h' 2022-12-29T03:38:27,115 adding 'trisicell/external/scistree/RerootTreeUtils.cpp' 2022-12-29T03:38:27,116 adding 'trisicell/external/scistree/RerootTreeUtils.h' 2022-12-29T03:38:27,122 adding 'trisicell/external/scistree/ScistDoublet.cpp' 2022-12-29T03:38:27,124 adding 'trisicell/external/scistree/ScistDoublet.hpp' 2022-12-29T03:38:27,125 adding 'trisicell/external/scistree/ScistErrRateInf.cpp' 2022-12-29T03:38:27,127 adding 'trisicell/external/scistree/ScistErrRateInf.hpp' 2022-12-29T03:38:27,130 adding 'trisicell/external/scistree/ScistGenotype.cpp' 2022-12-29T03:38:27,132 adding 'trisicell/external/scistree/ScistGenotype.hpp' 2022-12-29T03:38:27,137 adding 'trisicell/external/scistree/ScistPerfPhyImp.cpp' 2022-12-29T03:38:27,139 adding 'trisicell/external/scistree/ScistPerfPhyImp.hpp' 2022-12-29T03:38:27,141 adding 'trisicell/external/scistree/ScistPerfPhyUtils.cpp' 2022-12-29T03:38:27,143 adding 'trisicell/external/scistree/ScistPerfPhyUtils.hpp' 2022-12-29T03:38:27,148 adding 'trisicell/external/scistree/TreeBuilder.cpp' 2022-12-29T03:38:27,150 adding 'trisicell/external/scistree/TreeBuilder.h' 2022-12-29T03:38:27,154 adding 'trisicell/external/scistree/UnWeightedGraph.cpp' 2022-12-29T03:38:27,156 adding 'trisicell/external/scistree/UnWeightedGraph.h' 2022-12-29T03:38:27,161 adding 'trisicell/external/scistree/Utils.cpp' 2022-12-29T03:38:27,163 adding 'trisicell/external/scistree/Utils.h' 2022-12-29T03:38:27,165 adding 'trisicell/external/scistree/Utils2.cpp' 2022-12-29T03:38:27,167 adding 'trisicell/external/scistree/Utils2.h' 2022-12-29T03:38:27,176 adding 'trisicell/external/scistree/Utils3.cpp' 2022-12-29T03:38:27,178 adding 'trisicell/external/scistree/Utils3.h' 2022-12-29T03:38:27,182 adding 'trisicell/external/scistree/Utils4.cpp' 2022-12-29T03:38:27,188 adding 'trisicell/external/scistree/Utils4.h' 2022-12-29T03:38:27,190 adding 'trisicell/external/scistree/UtilsNumerical.cpp' 2022-12-29T03:38:27,192 adding 'trisicell/external/scistree/UtilsNumerical.h' 2022-12-29T03:38:27,194 adding 'trisicell/external/scistree/ctpl_stl.h' 2022-12-29T03:38:27,196 adding 'trisicell/external/scistree/main.cpp' 2022-12-29T03:38:27,198 adding 'trisicell/external/scistree/main.h' 2022-12-29T03:38:27,201 adding 'trisicell/external/scite/findBestTrees.cpp' 2022-12-29T03:38:27,202 adding 'trisicell/external/scite/findBestTrees.h' 2022-12-29T03:38:27,204 adding 'trisicell/external/scite/matrices.cpp' 2022-12-29T03:38:27,206 adding 'trisicell/external/scite/matrices.h' 2022-12-29T03:38:27,208 adding 'trisicell/external/scite/mcmc.cpp' 2022-12-29T03:38:27,210 adding 'trisicell/external/scite/mcmc.h' 2022-12-29T03:38:27,211 adding 'trisicell/external/scite/mcmcBinTreeMove.cpp' 2022-12-29T03:38:27,212 adding 'trisicell/external/scite/mcmcBinTreeMove.h' 2022-12-29T03:38:27,215 adding 'trisicell/external/scite/mcmcTreeMove.cpp' 2022-12-29T03:38:27,216 adding 'trisicell/external/scite/mcmcTreeMove.h' 2022-12-29T03:38:27,218 adding 'trisicell/external/scite/output.cpp' 2022-12-29T03:38:27,219 adding 'trisicell/external/scite/output.h' 2022-12-29T03:38:27,221 adding 'trisicell/external/scite/rand.cpp' 2022-12-29T03:38:27,222 adding 'trisicell/external/scite/rand.h' 2022-12-29T03:38:27,224 adding 'trisicell/external/scite/scoreBinTree.cpp' 2022-12-29T03:38:27,226 adding 'trisicell/external/scite/scoreBinTree.h' 2022-12-29T03:38:27,228 adding 'trisicell/external/scite/scoreTree.cpp' 2022-12-29T03:38:27,229 adding 'trisicell/external/scite/scoreTree.h' 2022-12-29T03:38:27,231 adding 'trisicell/external/scite/treelist.cpp' 2022-12-29T03:38:27,232 adding 'trisicell/external/scite/treelist.h' 2022-12-29T03:38:27,234 adding 'trisicell/external/scite/trees.cpp' 2022-12-29T03:38:27,236 adding 'trisicell/external/scite/trees.h' 2022-12-29T03:38:27,240 adding 'trisicell/external/scprob/main.cpp' 2022-12-29T03:38:27,242 adding 'trisicell/external/scprob/main.h' 2022-12-29T03:38:27,244 adding 'trisicell/io/__init__.py' 2022-12-29T03:38:27,246 adding 'trisicell/io/_genotype.py' 2022-12-29T03:38:27,247 adding 'trisicell/io/_tree.py' 2022-12-29T03:38:27,249 adding 'trisicell/logging/__init__.py' 2022-12-29T03:38:27,250 adding 'trisicell/logging/_logging.py' 2022-12-29T03:38:27,252 adding 'trisicell/pl/__init__.py' 2022-12-29T03:38:27,254 adding 'trisicell/pl/_data.py' 2022-12-29T03:38:27,256 adding 'trisicell/pl/_helper.py' 2022-12-29T03:38:27,258 adding 'trisicell/pl/_trees.py' 2022-12-29T03:38:27,260 adding 'trisicell/pp/__init__.py' 2022-12-29T03:38:27,262 adding 'trisicell/pp/_bifiltering.py' 2022-12-29T03:38:27,263 adding 'trisicell/pp/_binary.py' 2022-12-29T03:38:27,265 adding 'trisicell/pp/_readcount.py' 2022-12-29T03:38:27,267 adding 'trisicell/pp/_tree.py' 2022-12-29T03:38:27,268 adding 'trisicell/settings/__init__.py' 2022-12-29T03:38:27,270 adding 'trisicell/settings/_settings.py' 2022-12-29T03:38:27,272 adding 'trisicell/tl/__init__.py' 2022-12-29T03:38:27,274 adding 'trisicell/tl/cna/__init__.py' 2022-12-29T03:38:27,275 adding 'trisicell/tl/cna/_cna.py' 2022-12-29T03:38:27,277 adding 'trisicell/tl/consensus/__init__.py' 2022-12-29T03:38:27,279 adding 'trisicell/tl/consensus/_consensus.py' 2022-12-29T03:38:27,280 adding 'trisicell/tl/consensus/_consensus_day.py' 2022-12-29T03:38:27,282 adding 'trisicell/tl/fitch/__init__.py' 2022-12-29T03:38:27,284 adding 'trisicell/tl/fitch/_fitch.py' 2022-12-29T03:38:27,285 adding 'trisicell/tl/partition_function/__init__.py' 2022-12-29T03:38:27,287 adding 'trisicell/tl/partition_function/_clt_sampler.py' 2022-12-29T03:38:27,288 adding 'trisicell/tl/partition_function/_partition_function.py' 2022-12-29T03:38:27,290 adding 'trisicell/tl/partition_function/_pf.py' 2022-12-29T03:38:27,292 adding 'trisicell/tl/score/__init__.py' 2022-12-29T03:38:27,294 adding 'trisicell/tl/score/_others.py' 2022-12-29T03:38:27,296 adding 'trisicell/tl/score/_ours.py' 2022-12-29T03:38:27,298 adding 'trisicell/tl/solver/__init__.py' 2022-12-29T03:38:27,302 adding 'trisicell/tl/solver/_bnb.py' 2022-12-29T03:38:27,304 adding 'trisicell/tl/solver/_cardelino.py' 2022-12-29T03:38:27,305 adding 'trisicell/tl/solver/_cellphy.py' 2022-12-29T03:38:27,306 adding 'trisicell/tl/solver/_dendro.py' 2022-12-29T03:38:27,308 adding 'trisicell/tl/solver/_gpps.py' 2022-12-29T03:38:27,309 adding 'trisicell/tl/solver/_grmt.py' 2022-12-29T03:38:27,311 adding 'trisicell/tl/solver/_onconem.py' 2022-12-29T03:38:27,314 adding 'trisicell/tl/solver/_phiscs.py' 2022-12-29T03:38:27,315 adding 'trisicell/tl/solver/_sasc.py' 2022-12-29T03:38:27,316 adding 'trisicell/tl/solver/_sbm.py' 2022-12-29T03:38:27,318 adding 'trisicell/tl/solver/_scelestial.py' 2022-12-29T03:38:27,319 adding 'trisicell/tl/solver/_sciphi.py' 2022-12-29T03:38:27,322 adding 'trisicell/tl/solver/_scistree.py' 2022-12-29T03:38:27,323 adding 'trisicell/tl/solver/_scite.py' 2022-12-29T03:38:27,325 adding 'trisicell/tl/solver/_siclonefit.py' 2022-12-29T03:38:27,326 adding 'trisicell/tl/solver/_sphyr.py' 2022-12-29T03:38:27,328 adding 'trisicell/tl/solver/booster/__init__.py' 2022-12-29T03:38:27,330 adding 'trisicell/tl/solver/booster/_booster.py' 2022-12-29T03:38:27,332 adding 'trisicell/tl/solver/booster/_dependencies.py' 2022-12-29T03:38:27,335 adding 'trisicell/tl/solver/booster/_reconstruct_big_tree.py' 2022-12-29T03:38:27,336 adding 'trisicell/tl/solver/booster/_subsamples.py' 2022-12-29T03:38:27,338 adding 'trisicell/tl/solver/huntress/__init__.py' 2022-12-29T03:38:27,341 adding 'trisicell/tl/solver/huntress/_huntress.py' 2022-12-29T03:38:27,343 adding 'trisicell/ul/__init__.py' 2022-12-29T03:38:27,345 adding 'trisicell/ul/_hclustering.py' 2022-12-29T03:38:27,346 adding 'trisicell/ul/_packages.py' 2022-12-29T03:38:27,348 adding 'trisicell/ul/_servers.py' 2022-12-29T03:38:27,350 adding 'trisicell/ul/_trees.py' 2022-12-29T03:38:27,352 adding 'trisicell/ul/_utils.py' 2022-12-29T03:38:27,355 adding 'trisicell-0.1.1.dist-info/LICENSE' 2022-12-29T03:38:27,357 adding 'trisicell-0.1.1.dist-info/METADATA' 2022-12-29T03:38:27,358 adding 'trisicell-0.1.1.dist-info/WHEEL' 2022-12-29T03:38:27,359 adding 'trisicell-0.1.1.dist-info/dependency_links.txt' 2022-12-29T03:38:27,360 adding 'trisicell-0.1.1.dist-info/entry_points.txt' 2022-12-29T03:38:27,361 adding 'trisicell-0.1.1.dist-info/top_level.txt' 2022-12-29T03:38:27,365 adding 'trisicell-0.1.1.dist-info/RECORD' 2022-12-29T03:38:27,394 removing build/bdist.linux-armv7l/wheel 2022-12-29T03:38:27,676 Building wheel for trisicell (pyproject.toml): finished with status 'done' 2022-12-29T03:38:28,759 Created wheel for trisicell: filename=trisicell-0.1.1-cp39-cp39-linux_armv7l.whl size=52441108 sha256=ee93293a4ce5e1ebe82b4e1becf6d975bce20d216b825ccd5f308cbf3f4fc4ff 2022-12-29T03:38:28,760 Stored in directory: /tmp/pip-ephem-wheel-cache-n0a9h40u/wheels/dd/cc/7b/2b5f21f4808f7b16c477d92d7cfd9d5156970fd32aa67589f8 2022-12-29T03:38:28,807 Successfully built trisicell 2022-12-29T03:38:30,328 Removed build tracker: '/tmp/pip-build-tracker-ysymv98r'