2022-12-29T07:53:05,375 Created temporary directory: /tmp/pip-ephem-wheel-cache-xunbjbww 2022-12-29T07:53:05,380 Created temporary directory: /tmp/pip-build-tracker-escvs3i5 2022-12-29T07:53:05,381 Initialized build tracking at /tmp/pip-build-tracker-escvs3i5 2022-12-29T07:53:05,381 Created build tracker: /tmp/pip-build-tracker-escvs3i5 2022-12-29T07:53:05,381 Entered build tracker: /tmp/pip-build-tracker-escvs3i5 2022-12-29T07:53:05,382 Created temporary directory: /tmp/pip-wheel-zxj1nqkt 2022-12-29T07:53:05,390 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T07:53:05,395 Created temporary directory: /tmp/pip-ephem-wheel-cache-a_4ewa1w 2022-12-29T07:53:05,454 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T07:53:05,461 2 location(s) to search for versions of summarizedexperiment: 2022-12-29T07:53:05,461 * https://pypi.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,461 * https://www.piwheels.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,462 Fetching project page and analyzing links: https://pypi.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,463 Getting page https://pypi.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,466 Found index url https://pypi.org/simple 2022-12-29T07:53:05,659 Fetched page https://pypi.org/simple/summarizedexperiment/ as application/vnd.pypi.simple.v1+json 2022-12-29T07:53:05,666 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/a6/19/6590a80c2a5a9181756353504f72fb8f4b606166266759ee1c7379f76f0d/SummarizedExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,667 Found link https://files.pythonhosted.org/packages/ef/6e/081bad79f612712b3c17aa19dbbd3b3466ddf96b5bab899bea280fc5e2da/SummarizedExperiment-0.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1 2022-12-29T07:53:05,668 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/35/91/b90860298e56dd9de40a3947ae59a9531a6d01cee7399c284f927877ae95/SummarizedExperiment-0.1.1-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,668 Found link https://files.pythonhosted.org/packages/72/c6/f86011504cd48a88566ce375a9fdadea2e026511c551fcb6550f9f4bb499/SummarizedExperiment-0.1.1.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.1 2022-12-29T07:53:05,669 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/93/0d/f63ec4bdb02adb98cdcf0858c1f781cb870b7226137f6a85c99f44adc038/SummarizedExperiment-0.1.2-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,670 Found link https://files.pythonhosted.org/packages/82/6e/4f2f6f9388c4362b78f860106b46c51b9ec92c556b9b893a1567eb7119bc/SummarizedExperiment-0.1.2.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.2 2022-12-29T07:53:05,670 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/da/19/552a0282e766e520214ff3d5dd43486b8a1b658d7e2cc96ce9f1dfcaeb55/SummarizedExperiment-0.1.3-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,671 Found link https://files.pythonhosted.org/packages/1a/78/58d8654c5302fcb0d136903ccab0a1bd8beba8ebb7a2f4bf08e38703d513/SummarizedExperiment-0.1.3.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.3 2022-12-29T07:53:05,671 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/89/b9/f38eaccb2a5a82f928a2745b02abdd28c66d1bb4f8c629ef5bcc3f3a777e/SummarizedExperiment-0.1.4-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,672 Found link https://files.pythonhosted.org/packages/21/f7/9503b1cd2b6b89886ad4e5d49368487fc0bd5930e645c2d3621518d00c2c/SummarizedExperiment-0.1.4.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.4 2022-12-29T07:53:05,672 Skipping link: No binaries permitted for summarizedexperiment: https://files.pythonhosted.org/packages/28/17/3f554f9befa211b3b7495035da5f675540e7ed59d8630be9626a58a282ec/SummarizedExperiment-0.1.5-py3-none-any.whl (from https://pypi.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,673 Found link https://files.pythonhosted.org/packages/e8/fc/64ba3fdb2240310781c12ed6954e02578474f6cc86d6b6a5b74f5dfde178/SummarizedExperiment-0.1.5.tar.gz (from https://pypi.org/simple/summarizedexperiment/), version: 0.1.5 2022-12-29T07:53:05,674 Fetching project page and analyzing links: https://www.piwheels.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,675 Getting page https://www.piwheels.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,677 Found index url https://www.piwheels.org/simple 2022-12-29T07:53:05,902 Fetched page https://www.piwheels.org/simple/summarizedexperiment/ as text/html 2022-12-29T07:53:05,908 Skipping link: No binaries permitted for summarizedexperiment: https://www.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.4-py3-none-any.whl#sha256=37a07d9cd9ee1b99eae1c2a7232abfdc43ef82366e1ce76f7ae4b13715ac15c8 (from https://www.piwheels.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,909 Skipping link: No binaries permitted for summarizedexperiment: https://www.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.3-py3-none-any.whl#sha256=abc974e9e1e0e4c1cffd35fbde6a79f614e7e1ccf6e48feb8377d646dc76aecf (from https://www.piwheels.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,909 Skipping link: No binaries permitted for summarizedexperiment: https://www.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.2-py3-none-any.whl#sha256=16c48d15bf4940c95f83e1f89115a6ffc35b18021a931913cf2a5e17ea8364dd (from https://www.piwheels.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,910 Skipping link: No binaries permitted for summarizedexperiment: https://www.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1.1-py3-none-any.whl#sha256=f34793c0d8e2ce59476b655b6d0eec21f705d0856700daa0e1931726164d6cbf (from https://www.piwheels.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,910 Skipping link: No binaries permitted for summarizedexperiment: https://www.piwheels.org/simple/summarizedexperiment/SummarizedExperiment-0.1-py3-none-any.whl#sha256=5b303c6b659de5c38ed7e7b773cb18836a33e0aced12ef6e1e62d3434e481f2f (from https://www.piwheels.org/simple/summarizedexperiment/) 2022-12-29T07:53:05,911 Skipping link: not a file: https://www.piwheels.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,911 Skipping link: not a file: https://pypi.org/simple/summarizedexperiment/ 2022-12-29T07:53:05,949 Given no hashes to check 1 links for project 'summarizedexperiment': discarding no candidates 2022-12-29T07:53:05,979 Collecting summarizedexperiment==0.1.5 2022-12-29T07:53:05,983 Created temporary directory: /tmp/pip-unpack-clva5k_d 2022-12-29T07:53:06,219 Downloading SummarizedExperiment-0.1.5.tar.gz (26 kB) 2022-12-29T07:53:06,418 Added summarizedexperiment==0.1.5 from https://files.pythonhosted.org/packages/e8/fc/64ba3fdb2240310781c12ed6954e02578474f6cc86d6b6a5b74f5dfde178/SummarizedExperiment-0.1.5.tar.gz to build tracker '/tmp/pip-build-tracker-escvs3i5' 2022-12-29T07:53:06,431 Created temporary directory: /tmp/pip-build-env-3m6sbzr8 2022-12-29T07:53:06,443 Installing build dependencies: started 2022-12-29T07:53:06,445 Running command pip subprocess to install build dependencies 2022-12-29T07:53:09,143 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-12-29T07:53:09,947 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T07:53:10,001 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T07:53:13,889 Collecting setuptools>=46.1.0 2022-12-29T07:53:14,168 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-29T07:53:15,090 Collecting setuptools_scm[toml]>=5 2022-12-29T07:53:15,141 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2022-12-29T07:53:15,675 Collecting wheel 2022-12-29T07:53:15,708 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-29T07:53:16,069 Collecting tomli>=1.0.0 2022-12-29T07:53:16,102 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-12-29T07:53:17,040 Collecting importlib-metadata 2022-12-29T07:53:17,104 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-5.2.0-py3-none-any.whl (21 kB) 2022-12-29T07:53:17,502 Collecting packaging>=20.0 2022-12-29T07:53:17,538 Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB) 2022-12-29T07:53:17,763 Collecting typing-extensions 2022-12-29T07:53:17,796 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-12-29T07:53:19,371 Collecting zipp>=0.5 2022-12-29T07:53:19,387 Using cached zipp-3.11.0-py3-none-any.whl (6.6 kB) 2022-12-29T07:53:25,596 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2022-12-29T07:53:25,943 Creating /tmp/pip-build-env-3m6sbzr8/overlay/bin 2022-12-29T07:53:25,948 changing mode of /tmp/pip-build-env-3m6sbzr8/overlay/bin/wheel to 755 2022-12-29T07:53:31,765 Successfully installed importlib-metadata-5.2.0 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 zipp-3.11.0 2022-12-29T07:53:31,797 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-29T07:53:31,797 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-29T07:53:32,291 Installing build dependencies: finished with status 'done' 2022-12-29T07:53:32,302 Getting requirements to build wheel: started 2022-12-29T07:53:32,304 Running command Getting requirements to build wheel 2022-12-29T07:53:34,759 running egg_info 2022-12-29T07:53:34,775 writing src/SummarizedExperiment.egg-info/PKG-INFO 2022-12-29T07:53:34,779 writing dependency_links to src/SummarizedExperiment.egg-info/dependency_links.txt 2022-12-29T07:53:34,784 writing requirements to src/SummarizedExperiment.egg-info/requires.txt 2022-12-29T07:53:34,786 writing top-level names to src/SummarizedExperiment.egg-info/top_level.txt 2022-12-29T07:53:34,901 listing git files failed - pretending there aren't any 2022-12-29T07:53:34,922 reading manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:34,932 adding license file 'LICENSE.txt' 2022-12-29T07:53:34,941 writing manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:35,171 Getting requirements to build wheel: finished with status 'done' 2022-12-29T07:53:35,198 Created temporary directory: /tmp/pip-modern-metadata-1d93y1vs 2022-12-29T07:53:35,204 Preparing metadata (pyproject.toml): started 2022-12-29T07:53:35,206 Running command Preparing metadata (pyproject.toml) 2022-12-29T07:53:37,312 running dist_info 2022-12-29T07:53:37,358 creating /tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info 2022-12-29T07:53:37,371 writing /tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/PKG-INFO 2022-12-29T07:53:37,377 writing dependency_links to /tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/dependency_links.txt 2022-12-29T07:53:37,381 writing requirements to /tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/requires.txt 2022-12-29T07:53:37,383 writing top-level names to /tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/top_level.txt 2022-12-29T07:53:37,386 writing manifest file '/tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:37,494 listing git files failed - pretending there aren't any 2022-12-29T07:53:37,514 reading manifest file '/tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:37,525 adding license file 'LICENSE.txt' 2022-12-29T07:53:37,531 writing manifest file '/tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:37,533 creating '/tmp/pip-modern-metadata-1d93y1vs/SummarizedExperiment-0.1.5.dist-info' 2022-12-29T07:53:37,935 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-29T07:53:37,949 Source in /tmp/pip-wheel-zxj1nqkt/summarizedexperiment_525d2c5d689844fe8f67b7bace066ab1 has version 0.1.5, which satisfies requirement summarizedexperiment==0.1.5 from https://files.pythonhosted.org/packages/e8/fc/64ba3fdb2240310781c12ed6954e02578474f6cc86d6b6a5b74f5dfde178/SummarizedExperiment-0.1.5.tar.gz 2022-12-29T07:53:37,951 Removed summarizedexperiment==0.1.5 from https://files.pythonhosted.org/packages/e8/fc/64ba3fdb2240310781c12ed6954e02578474f6cc86d6b6a5b74f5dfde178/SummarizedExperiment-0.1.5.tar.gz from build tracker '/tmp/pip-build-tracker-escvs3i5' 2022-12-29T07:53:37,962 Created temporary directory: /tmp/pip-unpack-ka5oaj5p 2022-12-29T07:53:37,963 Building wheels for collected packages: summarizedexperiment 2022-12-29T07:53:37,973 Created temporary directory: /tmp/pip-wheel-nhb38bhe 2022-12-29T07:53:37,973 Destination directory: /tmp/pip-wheel-nhb38bhe 2022-12-29T07:53:37,978 Building wheel for summarizedexperiment (pyproject.toml): started 2022-12-29T07:53:37,980 Running command Building wheel for summarizedexperiment (pyproject.toml) 2022-12-29T07:53:40,120 running bdist_wheel 2022-12-29T07:53:40,211 running build 2022-12-29T07:53:40,212 running build_py 2022-12-29T07:53:40,233 creating build 2022-12-29T07:53:40,234 creating build/lib 2022-12-29T07:53:40,236 creating build/lib/summarizedexperiment 2022-12-29T07:53:40,238 copying src/summarizedexperiment/BaseSE.py -> build/lib/summarizedexperiment 2022-12-29T07:53:40,243 copying src/summarizedexperiment/__init__.py -> build/lib/summarizedexperiment 2022-12-29T07:53:40,246 copying src/summarizedexperiment/RangeSummarizedExperiment.py -> build/lib/summarizedexperiment 2022-12-29T07:53:40,251 copying src/summarizedexperiment/SummarizedExperiment.py -> build/lib/summarizedexperiment 2022-12-29T07:53:40,254 running egg_info 2022-12-29T07:53:40,305 writing src/SummarizedExperiment.egg-info/PKG-INFO 2022-12-29T07:53:40,308 writing dependency_links to src/SummarizedExperiment.egg-info/dependency_links.txt 2022-12-29T07:53:40,312 writing requirements to src/SummarizedExperiment.egg-info/requires.txt 2022-12-29T07:53:40,314 writing top-level names to src/SummarizedExperiment.egg-info/top_level.txt 2022-12-29T07:53:40,393 listing git files failed - pretending there aren't any 2022-12-29T07:53:40,414 reading manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:40,421 adding license file 'LICENSE.txt' 2022-12-29T07:53:40,430 writing manifest file 'src/SummarizedExperiment.egg-info/SOURCES.txt' 2022-12-29T07:53:40,480 installing to build/bdist.linux-armv7l/wheel 2022-12-29T07:53:40,481 running install 2022-12-29T07:53:40,544 running install_lib 2022-12-29T07:53:40,564 creating build/bdist.linux-armv7l 2022-12-29T07:53:40,566 creating build/bdist.linux-armv7l/wheel 2022-12-29T07:53:40,570 creating build/bdist.linux-armv7l/wheel/summarizedexperiment 2022-12-29T07:53:40,573 copying build/lib/summarizedexperiment/BaseSE.py -> build/bdist.linux-armv7l/wheel/summarizedexperiment 2022-12-29T07:53:40,578 copying build/lib/summarizedexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/summarizedexperiment 2022-12-29T07:53:40,583 copying build/lib/summarizedexperiment/RangeSummarizedExperiment.py -> build/bdist.linux-armv7l/wheel/summarizedexperiment 2022-12-29T07:53:40,588 copying build/lib/summarizedexperiment/SummarizedExperiment.py -> build/bdist.linux-armv7l/wheel/summarizedexperiment 2022-12-29T07:53:40,592 running install_egg_info 2022-12-29T07:53:40,614 Copying src/SummarizedExperiment.egg-info to build/bdist.linux-armv7l/wheel/SummarizedExperiment-0.1.5-py3.7.egg-info 2022-12-29T07:53:40,638 running install_scripts 2022-12-29T07:53:40,801 creating build/bdist.linux-armv7l/wheel/SummarizedExperiment-0.1.5.dist-info/WHEEL 2022-12-29T07:53:40,806 creating '/tmp/pip-wheel-nhb38bhe/.tmp-g2j7fo54/SummarizedExperiment-0.1.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-29T07:53:40,815 adding 'summarizedexperiment/BaseSE.py' 2022-12-29T07:53:40,820 adding 'summarizedexperiment/RangeSummarizedExperiment.py' 2022-12-29T07:53:40,824 adding 'summarizedexperiment/SummarizedExperiment.py' 2022-12-29T07:53:40,826 adding 'summarizedexperiment/__init__.py' 2022-12-29T07:53:40,829 adding 'SummarizedExperiment-0.1.5.dist-info/LICENSE.txt' 2022-12-29T07:53:40,831 adding 'SummarizedExperiment-0.1.5.dist-info/METADATA' 2022-12-29T07:53:40,833 adding 'SummarizedExperiment-0.1.5.dist-info/WHEEL' 2022-12-29T07:53:40,835 adding 'SummarizedExperiment-0.1.5.dist-info/top_level.txt' 2022-12-29T07:53:40,837 adding 'SummarizedExperiment-0.1.5.dist-info/RECORD' 2022-12-29T07:53:40,839 removing build/bdist.linux-armv7l/wheel 2022-12-29T07:53:41,095 Building wheel for summarizedexperiment (pyproject.toml): finished with status 'done' 2022-12-29T07:53:41,107 Created wheel for summarizedexperiment: filename=SummarizedExperiment-0.1.5-py3-none-any.whl size=11146 sha256=98cd322b00546c919b653eef6202ab18a1fa115b5c6c3d31b405ff642442c204 2022-12-29T07:53:41,109 Stored in directory: /tmp/pip-ephem-wheel-cache-a_4ewa1w/wheels/1c/2f/96/49da2f04e20d645937dd059f576651bb3be84b5a43519ee0ae 2022-12-29T07:53:41,134 Successfully built summarizedexperiment 2022-12-29T07:53:41,141 Removed build tracker: '/tmp/pip-build-tracker-escvs3i5'