2022-12-29T11:22:31,040 Created temporary directory: /tmp/pip-ephem-wheel-cache-zrit60p6 2022-12-29T11:22:31,045 Created temporary directory: /tmp/pip-build-tracker-d4mny4__ 2022-12-29T11:22:31,046 Initialized build tracking at /tmp/pip-build-tracker-d4mny4__ 2022-12-29T11:22:31,046 Created build tracker: /tmp/pip-build-tracker-d4mny4__ 2022-12-29T11:22:31,046 Entered build tracker: /tmp/pip-build-tracker-d4mny4__ 2022-12-29T11:22:31,048 Created temporary directory: /tmp/pip-wheel-54a4p1be 2022-12-29T11:22:31,056 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T11:22:31,061 Created temporary directory: /tmp/pip-ephem-wheel-cache-r493io02 2022-12-29T11:22:31,118 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T11:22:31,125 2 location(s) to search for versions of singlecellexperiment: 2022-12-29T11:22:31,125 * https://pypi.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,125 * https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,126 Fetching project page and analyzing links: https://pypi.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,127 Getting page https://pypi.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,131 Found index url https://pypi.org/simple 2022-12-29T11:22:31,386 Fetched page https://pypi.org/simple/singlecellexperiment/ as application/vnd.pypi.simple.v1+json 2022-12-29T11:22:31,390 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/06/22/dc7ff7a9cbb849320db55483824aa238639983004a3384e3cbb56fe1b55c/SingleCellExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-29T11:22:31,391 Found link https://files.pythonhosted.org/packages/4f/c7/2f87f03dc0a39652929e596b999610770d5a2ad3c98c9d4eda99ac6ad1fc/SingleCellExperiment-0.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.1 2022-12-29T11:22:31,391 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/12/17/fdf09ec58f3668dedd84dd72d7f33e9a39b92641c71419a31ba4b11fd93f/SingleCellExperiment-0.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-29T11:22:31,392 Found link https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2 2022-12-29T11:22:31,393 Fetching project page and analyzing links: https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,393 Getting page https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,396 Found index url https://www.piwheels.org/simple 2022-12-29T11:22:31,614 Fetched page https://www.piwheels.org/simple/singlecellexperiment/ as text/html 2022-12-29T11:22:31,617 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.1-py3-none-any.whl#sha256=3f769bcfff226d0998e8ad6fb4dff2e44710993eb3067a315d50b3031efb1e4f (from https://www.piwheels.org/simple/singlecellexperiment/) 2022-12-29T11:22:31,618 Skipping link: not a file: https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,618 Skipping link: not a file: https://pypi.org/simple/singlecellexperiment/ 2022-12-29T11:22:31,650 Given no hashes to check 1 links for project 'singlecellexperiment': discarding no candidates 2022-12-29T11:22:31,684 Collecting singlecellexperiment==0.2 2022-12-29T11:22:31,688 Created temporary directory: /tmp/pip-unpack-ds63egr1 2022-12-29T11:22:32,190 Downloading SingleCellExperiment-0.2.tar.gz (1.1 MB) 2022-12-29T11:22:32,776 Added singlecellexperiment==0.2 from https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-d4mny4__' 2022-12-29T11:22:32,790 Created temporary directory: /tmp/pip-build-env-oivo5owl 2022-12-29T11:22:32,801 Installing build dependencies: started 2022-12-29T11:22:32,803 Running command pip subprocess to install build dependencies 2022-12-29T11:22:35,489 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-12-29T11:22:36,301 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-29T11:22:36,354 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-29T11:22:40,242 Collecting setuptools>=46.1.0 2022-12-29T11:22:40,520 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-29T11:22:41,461 Collecting setuptools_scm[toml]>=5 2022-12-29T11:22:41,518 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2022-12-29T11:22:42,047 Collecting wheel 2022-12-29T11:22:42,081 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-29T11:22:42,591 Collecting packaging>=20.0 2022-12-29T11:22:42,654 Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB) 2022-12-29T11:22:43,583 Collecting importlib-metadata 2022-12-29T11:22:43,617 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-5.2.0-py3-none-any.whl (21 kB) 2022-12-29T11:22:43,877 Collecting tomli>=1.0.0 2022-12-29T11:22:43,934 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-12-29T11:22:44,161 Collecting typing-extensions 2022-12-29T11:22:44,194 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-12-29T11:22:45,757 Collecting zipp>=0.5 2022-12-29T11:22:45,772 Using cached zipp-3.11.0-py3-none-any.whl (6.6 kB) 2022-12-29T11:22:51,892 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2022-12-29T11:22:52,233 Creating /tmp/pip-build-env-oivo5owl/overlay/bin 2022-12-29T11:22:52,237 changing mode of /tmp/pip-build-env-oivo5owl/overlay/bin/wheel to 755 2022-12-29T11:22:58,044 Successfully installed importlib-metadata-5.2.0 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 zipp-3.11.0 2022-12-29T11:22:58,076 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-29T11:22:58,076 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-29T11:22:58,571 Installing build dependencies: finished with status 'done' 2022-12-29T11:22:58,583 Getting requirements to build wheel: started 2022-12-29T11:22:58,585 Running command Getting requirements to build wheel 2022-12-29T11:23:01,068 running egg_info 2022-12-29T11:23:01,086 writing src/SingleCellExperiment.egg-info/PKG-INFO 2022-12-29T11:23:01,089 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-29T11:23:01,095 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2022-12-29T11:23:01,097 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2022-12-29T11:23:01,213 listing git files failed - pretending there aren't any 2022-12-29T11:23:01,233 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:01,245 adding license file 'LICENSE.txt' 2022-12-29T11:23:01,254 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:01,484 Getting requirements to build wheel: finished with status 'done' 2022-12-29T11:23:01,512 Created temporary directory: /tmp/pip-modern-metadata-zu6hz3zm 2022-12-29T11:23:01,518 Preparing metadata (pyproject.toml): started 2022-12-29T11:23:01,520 Running command Preparing metadata (pyproject.toml) 2022-12-29T11:23:03,630 running dist_info 2022-12-29T11:23:03,675 creating /tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info 2022-12-29T11:23:03,689 writing /tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/PKG-INFO 2022-12-29T11:23:03,695 writing dependency_links to /tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-29T11:23:03,699 writing requirements to /tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/requires.txt 2022-12-29T11:23:03,702 writing top-level names to /tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/top_level.txt 2022-12-29T11:23:03,704 writing manifest file '/tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:03,815 listing git files failed - pretending there aren't any 2022-12-29T11:23:03,836 reading manifest file '/tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:03,846 adding license file 'LICENSE.txt' 2022-12-29T11:23:03,852 writing manifest file '/tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:03,854 creating '/tmp/pip-modern-metadata-zu6hz3zm/SingleCellExperiment-0.2.dist-info' 2022-12-29T11:23:04,260 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-29T11:23:04,274 Source in /tmp/pip-wheel-54a4p1be/singlecellexperiment_91d7daa85a504833bc5d01e1a8f94f65 has version 0.2, which satisfies requirement singlecellexperiment==0.2 from https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz 2022-12-29T11:23:04,276 Removed singlecellexperiment==0.2 from https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-d4mny4__' 2022-12-29T11:23:04,286 Created temporary directory: /tmp/pip-unpack-g0eb_i3b 2022-12-29T11:23:04,287 Building wheels for collected packages: singlecellexperiment 2022-12-29T11:23:04,297 Created temporary directory: /tmp/pip-wheel-t9p5uure 2022-12-29T11:23:04,298 Destination directory: /tmp/pip-wheel-t9p5uure 2022-12-29T11:23:04,303 Building wheel for singlecellexperiment (pyproject.toml): started 2022-12-29T11:23:04,305 Running command Building wheel for singlecellexperiment (pyproject.toml) 2022-12-29T11:23:06,486 running bdist_wheel 2022-12-29T11:23:06,580 running build 2022-12-29T11:23:06,580 running build_py 2022-12-29T11:23:06,601 creating build 2022-12-29T11:23:06,602 creating build/lib 2022-12-29T11:23:06,604 creating build/lib/singlecellexperiment 2022-12-29T11:23:06,606 copying src/singlecellexperiment/__init__.py -> build/lib/singlecellexperiment 2022-12-29T11:23:06,610 copying src/singlecellexperiment/SingleCellExperiment.py -> build/lib/singlecellexperiment 2022-12-29T11:23:06,616 creating build/lib/singlecellexperiment/io 2022-12-29T11:23:06,618 copying src/singlecellexperiment/io/__init__.py -> build/lib/singlecellexperiment/io 2022-12-29T11:23:06,622 copying src/singlecellexperiment/io/anndata.py -> build/lib/singlecellexperiment/io 2022-12-29T11:23:06,626 copying src/singlecellexperiment/io/tenx.py -> build/lib/singlecellexperiment/io 2022-12-29T11:23:06,629 running egg_info 2022-12-29T11:23:06,680 writing src/SingleCellExperiment.egg-info/PKG-INFO 2022-12-29T11:23:06,683 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-29T11:23:06,687 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2022-12-29T11:23:06,689 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2022-12-29T11:23:06,771 listing git files failed - pretending there aren't any 2022-12-29T11:23:06,791 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:06,799 adding license file 'LICENSE.txt' 2022-12-29T11:23:06,809 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-29T11:23:06,860 installing to build/bdist.linux-armv7l/wheel 2022-12-29T11:23:06,860 running install 2022-12-29T11:23:06,923 running install_lib 2022-12-29T11:23:06,943 creating build/bdist.linux-armv7l 2022-12-29T11:23:06,944 creating build/bdist.linux-armv7l/wheel 2022-12-29T11:23:06,948 creating build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-29T11:23:06,950 copying build/lib/singlecellexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-29T11:23:06,954 copying build/lib/singlecellexperiment/SingleCellExperiment.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-29T11:23:06,961 creating build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-29T11:23:06,963 copying build/lib/singlecellexperiment/io/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-29T11:23:06,967 copying build/lib/singlecellexperiment/io/anndata.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-29T11:23:06,971 copying build/lib/singlecellexperiment/io/tenx.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-29T11:23:06,974 running install_egg_info 2022-12-29T11:23:06,996 Copying src/SingleCellExperiment.egg-info to build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2-py3.7.egg-info 2022-12-29T11:23:07,021 running install_scripts 2022-12-29T11:23:07,187 creating build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.dist-info/WHEEL 2022-12-29T11:23:07,193 creating '/tmp/pip-wheel-t9p5uure/.tmp-ft4io2uy/SingleCellExperiment-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-29T11:23:07,204 adding 'singlecellexperiment/SingleCellExperiment.py' 2022-12-29T11:23:07,207 adding 'singlecellexperiment/__init__.py' 2022-12-29T11:23:07,210 adding 'singlecellexperiment/io/__init__.py' 2022-12-29T11:23:07,213 adding 'singlecellexperiment/io/anndata.py' 2022-12-29T11:23:07,216 adding 'singlecellexperiment/io/tenx.py' 2022-12-29T11:23:07,218 adding 'SingleCellExperiment-0.2.dist-info/LICENSE.txt' 2022-12-29T11:23:07,221 adding 'SingleCellExperiment-0.2.dist-info/METADATA' 2022-12-29T11:23:07,223 adding 'SingleCellExperiment-0.2.dist-info/WHEEL' 2022-12-29T11:23:07,225 adding 'SingleCellExperiment-0.2.dist-info/top_level.txt' 2022-12-29T11:23:07,226 adding 'SingleCellExperiment-0.2.dist-info/RECORD' 2022-12-29T11:23:07,229 removing build/bdist.linux-armv7l/wheel 2022-12-29T11:23:07,486 Building wheel for singlecellexperiment (pyproject.toml): finished with status 'done' 2022-12-29T11:23:07,498 Created wheel for singlecellexperiment: filename=SingleCellExperiment-0.2-py3-none-any.whl size=8186 sha256=a65a3769c1131ce8b3960c77dfebb0d0a4684a3c6e27ee1b7f5b3a6412615ffb 2022-12-29T11:23:07,500 Stored in directory: /tmp/pip-ephem-wheel-cache-r493io02/wheels/31/52/a5/b8348e2d1024f89af4c11bc04507e17676559e9f03082d5d7c 2022-12-29T11:23:07,525 Successfully built singlecellexperiment 2022-12-29T11:23:07,545 Removed build tracker: '/tmp/pip-build-tracker-d4mny4__'