2022-12-31T14:13:23,740 Created temporary directory: /tmp/pip-ephem-wheel-cache-x0owtlph 2022-12-31T14:13:23,744 Created temporary directory: /tmp/pip-build-tracker-tojggysf 2022-12-31T14:13:23,745 Initialized build tracking at /tmp/pip-build-tracker-tojggysf 2022-12-31T14:13:23,746 Created build tracker: /tmp/pip-build-tracker-tojggysf 2022-12-31T14:13:23,746 Entered build tracker: /tmp/pip-build-tracker-tojggysf 2022-12-31T14:13:23,747 Created temporary directory: /tmp/pip-wheel-agqk6pjd 2022-12-31T14:13:23,755 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-31T14:13:23,760 Created temporary directory: /tmp/pip-ephem-wheel-cache-z1rsp07f 2022-12-31T14:13:23,811 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-31T14:13:23,818 2 location(s) to search for versions of singlecellexperiment: 2022-12-31T14:13:23,818 * https://pypi.org/simple/singlecellexperiment/ 2022-12-31T14:13:23,818 * https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-31T14:13:23,819 Fetching project page and analyzing links: https://pypi.org/simple/singlecellexperiment/ 2022-12-31T14:13:23,820 Getting page https://pypi.org/simple/singlecellexperiment/ 2022-12-31T14:13:23,823 Found index url https://pypi.org/simple 2022-12-31T14:13:24,055 Fetched page https://pypi.org/simple/singlecellexperiment/ as application/vnd.pypi.simple.v1+json 2022-12-31T14:13:24,060 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/06/22/dc7ff7a9cbb849320db55483824aa238639983004a3384e3cbb56fe1b55c/SingleCellExperiment-0.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,061 Found link https://files.pythonhosted.org/packages/4f/c7/2f87f03dc0a39652929e596b999610770d5a2ad3c98c9d4eda99ac6ad1fc/SingleCellExperiment-0.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.1 2022-12-31T14:13:24,062 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/12/17/fdf09ec58f3668dedd84dd72d7f33e9a39b92641c71419a31ba4b11fd93f/SingleCellExperiment-0.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,063 Found link https://files.pythonhosted.org/packages/68/8b/d8c503e58f1dd084d84aab9ccf9c5496bcddbbd18a09571d5163f01ef25c/SingleCellExperiment-0.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2 2022-12-31T14:13:24,063 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/39/57/e51f288c79b8ceab3e3256bf280bea555114a5f69043fcd3079c61bc0c3a/SingleCellExperiment-0.2.1-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,064 Found link https://files.pythonhosted.org/packages/e6/16/21b02cd4340a21322d8f0393955aa35b917e5a3771293b7754897e44d7dd/SingleCellExperiment-0.2.1.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.1 2022-12-31T14:13:24,064 Skipping link: No binaries permitted for singlecellexperiment: https://files.pythonhosted.org/packages/db/ba/9e1dc2767aa10eb42ccfd538a2f3f5a4e6fa6e50abda9df14e142606c1ce/SingleCellExperiment-0.2.2-py3-none-any.whl (from https://pypi.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,065 Found link https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz (from https://pypi.org/simple/singlecellexperiment/), version: 0.2.2 2022-12-31T14:13:24,066 Fetching project page and analyzing links: https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-31T14:13:24,067 Getting page https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-31T14:13:24,069 Found index url https://www.piwheels.org/simple 2022-12-31T14:13:24,292 Fetched page https://www.piwheels.org/simple/singlecellexperiment/ as text/html 2022-12-31T14:13:24,296 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2.1-py3-none-any.whl#sha256=79346b13d2b934a5e3ea35c048ac23d7cf2655855f8b490272d0861daf232df9 (from https://www.piwheels.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,297 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.2-py3-none-any.whl#sha256=a65a3769c1131ce8b3960c77dfebb0d0a4684a3c6e27ee1b7f5b3a6412615ffb (from https://www.piwheels.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,298 Skipping link: No binaries permitted for singlecellexperiment: https://www.piwheels.org/simple/singlecellexperiment/SingleCellExperiment-0.1-py3-none-any.whl#sha256=3f769bcfff226d0998e8ad6fb4dff2e44710993eb3067a315d50b3031efb1e4f (from https://www.piwheels.org/simple/singlecellexperiment/) 2022-12-31T14:13:24,298 Skipping link: not a file: https://www.piwheels.org/simple/singlecellexperiment/ 2022-12-31T14:13:24,299 Skipping link: not a file: https://pypi.org/simple/singlecellexperiment/ 2022-12-31T14:13:24,333 Given no hashes to check 1 links for project 'singlecellexperiment': discarding no candidates 2022-12-31T14:13:24,363 Collecting singlecellexperiment==0.2.2 2022-12-31T14:13:24,369 Created temporary directory: /tmp/pip-unpack-7l4u_9kd 2022-12-31T14:13:24,748 Downloading SingleCellExperiment-0.2.2.tar.gz (1.1 MB) 2022-12-31T14:13:25,330 Added singlecellexperiment==0.2.2 from https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-tojggysf' 2022-12-31T14:13:25,344 Created temporary directory: /tmp/pip-build-env-bmfavuq5 2022-12-31T14:13:25,355 Installing build dependencies: started 2022-12-31T14:13:25,358 Running command pip subprocess to install build dependencies 2022-12-31T14:13:28,136 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2022-12-31T14:13:29,160 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-12-31T14:13:29,213 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-12-31T14:13:33,072 Collecting setuptools>=46.1.0 2022-12-31T14:13:36,153 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2022-12-31T14:13:37,102 Collecting setuptools_scm[toml]>=5 2022-12-31T14:13:37,137 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2022-12-31T14:13:37,663 Collecting wheel 2022-12-31T14:13:37,698 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2022-12-31T14:13:38,049 Collecting tomli>=1.0.0 2022-12-31T14:13:38,084 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-12-31T14:13:38,996 Collecting importlib-metadata 2022-12-31T14:13:39,028 Using cached https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-5.2.0-py3-none-any.whl (21 kB) 2022-12-31T14:13:39,423 Collecting packaging>=20.0 2022-12-31T14:13:39,458 Using cached https://www.piwheels.org/simple/packaging/packaging-22.0-py3-none-any.whl (42 kB) 2022-12-31T14:13:39,683 Collecting typing-extensions 2022-12-31T14:13:39,736 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.4.0-py3-none-any.whl (26 kB) 2022-12-31T14:13:41,325 Collecting zipp>=0.5 2022-12-31T14:13:41,340 Using cached zipp-3.11.0-py3-none-any.whl (6.6 kB) 2022-12-31T14:13:48,756 Installing collected packages: zipp, wheel, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm 2022-12-31T14:13:49,105 Creating /tmp/pip-build-env-bmfavuq5/overlay/bin 2022-12-31T14:13:49,110 changing mode of /tmp/pip-build-env-bmfavuq5/overlay/bin/wheel to 755 2022-12-31T14:13:54,988 Successfully installed importlib-metadata-5.2.0 packaging-22.0 setuptools-65.6.3 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.4.0 wheel-0.38.4 zipp-3.11.0 2022-12-31T14:13:55,026 [notice] A new release of pip available: 22.3 -> 22.3.1 2022-12-31T14:13:55,027 [notice] To update, run: python3 -m pip install --upgrade pip 2022-12-31T14:13:55,546 Installing build dependencies: finished with status 'done' 2022-12-31T14:13:55,557 Getting requirements to build wheel: started 2022-12-31T14:13:55,559 Running command Getting requirements to build wheel 2022-12-31T14:14:00,634 running egg_info 2022-12-31T14:14:00,652 writing src/SingleCellExperiment.egg-info/PKG-INFO 2022-12-31T14:14:00,655 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-31T14:14:00,661 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2022-12-31T14:14:00,663 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2022-12-31T14:14:00,779 listing git files failed - pretending there aren't any 2022-12-31T14:14:00,799 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:00,813 adding license file 'LICENSE.txt' 2022-12-31T14:14:00,822 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:01,050 Getting requirements to build wheel: finished with status 'done' 2022-12-31T14:14:01,077 Created temporary directory: /tmp/pip-modern-metadata-rlkyunst 2022-12-31T14:14:01,083 Preparing metadata (pyproject.toml): started 2022-12-31T14:14:01,085 Running command Preparing metadata (pyproject.toml) 2022-12-31T14:14:03,244 running dist_info 2022-12-31T14:14:03,290 creating /tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info 2022-12-31T14:14:03,304 writing /tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/PKG-INFO 2022-12-31T14:14:03,309 writing dependency_links to /tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-31T14:14:03,314 writing requirements to /tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/requires.txt 2022-12-31T14:14:03,317 writing top-level names to /tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/top_level.txt 2022-12-31T14:14:03,319 writing manifest file '/tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:03,430 listing git files failed - pretending there aren't any 2022-12-31T14:14:03,449 reading manifest file '/tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:03,459 adding license file 'LICENSE.txt' 2022-12-31T14:14:03,465 writing manifest file '/tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:03,468 creating '/tmp/pip-modern-metadata-rlkyunst/SingleCellExperiment-0.2.2.dist-info' 2022-12-31T14:14:03,868 Preparing metadata (pyproject.toml): finished with status 'done' 2022-12-31T14:14:03,883 Source in /tmp/pip-wheel-agqk6pjd/singlecellexperiment_0518d37e81fa4c578457a65884cdf124 has version 0.2.2, which satisfies requirement singlecellexperiment==0.2.2 from https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz 2022-12-31T14:14:03,885 Removed singlecellexperiment==0.2.2 from https://files.pythonhosted.org/packages/3c/a9/203a470e4b8aa9b75f3c2885bc501799818c14a2dd10dc91fe37050594c5/SingleCellExperiment-0.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-tojggysf' 2022-12-31T14:14:03,894 Created temporary directory: /tmp/pip-unpack-t5xrp1gf 2022-12-31T14:14:03,895 Building wheels for collected packages: singlecellexperiment 2022-12-31T14:14:03,905 Created temporary directory: /tmp/pip-wheel-adk2eqs0 2022-12-31T14:14:03,905 Destination directory: /tmp/pip-wheel-adk2eqs0 2022-12-31T14:14:03,911 Building wheel for singlecellexperiment (pyproject.toml): started 2022-12-31T14:14:03,913 Running command Building wheel for singlecellexperiment (pyproject.toml) 2022-12-31T14:14:06,089 running bdist_wheel 2022-12-31T14:14:06,183 running build 2022-12-31T14:14:06,184 running build_py 2022-12-31T14:14:06,204 creating build 2022-12-31T14:14:06,205 creating build/lib 2022-12-31T14:14:06,207 creating build/lib/singlecellexperiment 2022-12-31T14:14:06,209 copying src/singlecellexperiment/SingleCellExperiment.py -> build/lib/singlecellexperiment 2022-12-31T14:14:06,214 copying src/singlecellexperiment/__init__.py -> build/lib/singlecellexperiment 2022-12-31T14:14:06,219 creating build/lib/singlecellexperiment/io 2022-12-31T14:14:06,221 copying src/singlecellexperiment/io/tenx.py -> build/lib/singlecellexperiment/io 2022-12-31T14:14:06,225 copying src/singlecellexperiment/io/anndata.py -> build/lib/singlecellexperiment/io 2022-12-31T14:14:06,229 copying src/singlecellexperiment/io/__init__.py -> build/lib/singlecellexperiment/io 2022-12-31T14:14:06,231 running egg_info 2022-12-31T14:14:06,329 writing src/SingleCellExperiment.egg-info/PKG-INFO 2022-12-31T14:14:06,332 writing dependency_links to src/SingleCellExperiment.egg-info/dependency_links.txt 2022-12-31T14:14:06,335 writing requirements to src/SingleCellExperiment.egg-info/requires.txt 2022-12-31T14:14:06,337 writing top-level names to src/SingleCellExperiment.egg-info/top_level.txt 2022-12-31T14:14:06,418 listing git files failed - pretending there aren't any 2022-12-31T14:14:06,438 reading manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:06,444 adding license file 'LICENSE.txt' 2022-12-31T14:14:06,454 writing manifest file 'src/SingleCellExperiment.egg-info/SOURCES.txt' 2022-12-31T14:14:06,506 installing to build/bdist.linux-armv7l/wheel 2022-12-31T14:14:06,506 running install 2022-12-31T14:14:06,570 running install_lib 2022-12-31T14:14:06,591 creating build/bdist.linux-armv7l 2022-12-31T14:14:06,592 creating build/bdist.linux-armv7l/wheel 2022-12-31T14:14:06,595 creating build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-31T14:14:06,597 copying build/lib/singlecellexperiment/SingleCellExperiment.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-31T14:14:06,603 copying build/lib/singlecellexperiment/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment 2022-12-31T14:14:06,607 creating build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-31T14:14:06,609 copying build/lib/singlecellexperiment/io/tenx.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-31T14:14:06,613 copying build/lib/singlecellexperiment/io/anndata.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-31T14:14:06,617 copying build/lib/singlecellexperiment/io/__init__.py -> build/bdist.linux-armv7l/wheel/singlecellexperiment/io 2022-12-31T14:14:06,620 running install_egg_info 2022-12-31T14:14:06,642 Copying src/SingleCellExperiment.egg-info to build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.2-py3.7.egg-info 2022-12-31T14:14:06,666 running install_scripts 2022-12-31T14:14:06,832 creating build/bdist.linux-armv7l/wheel/SingleCellExperiment-0.2.2.dist-info/WHEEL 2022-12-31T14:14:06,837 creating '/tmp/pip-wheel-adk2eqs0/.tmp-ul2t9u7i/SingleCellExperiment-0.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-12-31T14:14:06,847 adding 'singlecellexperiment/SingleCellExperiment.py' 2022-12-31T14:14:06,850 adding 'singlecellexperiment/__init__.py' 2022-12-31T14:14:06,853 adding 'singlecellexperiment/io/__init__.py' 2022-12-31T14:14:06,856 adding 'singlecellexperiment/io/anndata.py' 2022-12-31T14:14:06,859 adding 'singlecellexperiment/io/tenx.py' 2022-12-31T14:14:06,861 adding 'SingleCellExperiment-0.2.2.dist-info/LICENSE.txt' 2022-12-31T14:14:06,864 adding 'SingleCellExperiment-0.2.2.dist-info/METADATA' 2022-12-31T14:14:06,866 adding 'SingleCellExperiment-0.2.2.dist-info/WHEEL' 2022-12-31T14:14:06,868 adding 'SingleCellExperiment-0.2.2.dist-info/top_level.txt' 2022-12-31T14:14:06,870 adding 'SingleCellExperiment-0.2.2.dist-info/RECORD' 2022-12-31T14:14:06,872 removing build/bdist.linux-armv7l/wheel 2022-12-31T14:14:07,128 Building wheel for singlecellexperiment (pyproject.toml): finished with status 'done' 2022-12-31T14:14:07,140 Created wheel for singlecellexperiment: filename=SingleCellExperiment-0.2.2-py3-none-any.whl size=8385 sha256=bebfd5697c376b98a2cd4ccf7a10b257390d8711dd7b46cde48f2550545bf09e 2022-12-31T14:14:07,142 Stored in directory: /tmp/pip-ephem-wheel-cache-z1rsp07f/wheels/ae/87/6c/dbcd6f8f0e4f67fafb92297e3a86a8346107472ee021b5b11d 2022-12-31T14:14:07,167 Successfully built singlecellexperiment 2022-12-31T14:14:07,175 Removed build tracker: '/tmp/pip-build-tracker-tojggysf'