2023-01-03T19:07:32,731 Created temporary directory: /tmp/pip-ephem-wheel-cache-ipq_60xh 2023-01-03T19:07:32,736 Created temporary directory: /tmp/pip-build-tracker-t1im_1w2 2023-01-03T19:07:32,736 Initialized build tracking at /tmp/pip-build-tracker-t1im_1w2 2023-01-03T19:07:32,737 Created build tracker: /tmp/pip-build-tracker-t1im_1w2 2023-01-03T19:07:32,737 Entered build tracker: /tmp/pip-build-tracker-t1im_1w2 2023-01-03T19:07:32,738 Created temporary directory: /tmp/pip-wheel-i4ukmjda 2023-01-03T19:07:32,746 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-03T19:07:32,752 Created temporary directory: /tmp/pip-ephem-wheel-cache-gu4o3l5m 2023-01-03T19:07:32,802 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-03T19:07:32,809 2 location(s) to search for versions of biom-format: 2023-01-03T19:07:32,809 * https://pypi.org/simple/biom-format/ 2023-01-03T19:07:32,809 * https://www.piwheels.org/simple/biom-format/ 2023-01-03T19:07:32,810 Fetching project page and analyzing links: https://pypi.org/simple/biom-format/ 2023-01-03T19:07:32,811 Getting page https://pypi.org/simple/biom-format/ 2023-01-03T19:07:32,814 Found index url https://pypi.org/simple 2023-01-03T19:07:33,001 Fetched page https://pypi.org/simple/biom-format/ as application/vnd.pypi.simple.v1+json 2023-01-03T19:07:33,012 Found link https://files.pythonhosted.org/packages/e8/a0/0b4947cd716f8923410be46d0473442e906e80fd605d1f900667224878a9/biom-format-1.2.0-dev.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.2.0-dev 2023-01-03T19:07:33,013 Found link https://files.pythonhosted.org/packages/5d/a6/50855b83db9932d78ff10721d90f79725729040db8117ce2c5a1e50c3a75/biom-format-1.3.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.0 2023-01-03T19:07:33,014 Found link https://files.pythonhosted.org/packages/98/3b/4e80a9a5c4a3c6764aa8c0c994973e7df71eee02fc6b8cc6e1d06a64ab7e/biom-format-1.3.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 1.3.1 2023-01-03T19:07:33,015 Found link https://files.pythonhosted.org/packages/ab/62/b44f747c549c2cb3408462905461ae8d0975163c927b4ac4452321368815/biom-format-2.0.0.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.0 2023-01-03T19:07:33,016 Found link https://files.pythonhosted.org/packages/26/14/46ce3a0c94b4e5f03473b029be7df19341c525c92d310443ca1bd935c4c1/biom-format-2.0.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.0.1 2023-01-03T19:07:33,016 Found link https://files.pythonhosted.org/packages/bc/8e/c937b6997062dfc70cd6fc6f53b70703dcec400e39af2d43542349f7ace6/biom-format-2.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1 2023-01-03T19:07:33,017 Found link https://files.pythonhosted.org/packages/40/45/a7a64146c75f00cf9889753d39a0371adf2982ee3f1eb31c28efbb5a3529/biom-format-2.1.1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.1 2023-01-03T19:07:33,018 Found link https://files.pythonhosted.org/packages/d9/de/65d8089e4aab975658f80c4975015fb5c761fe4c37868cc317733f33d0cd/biom-format-2.1.2.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.2 2023-01-03T19:07:33,018 Found link https://files.pythonhosted.org/packages/9d/ed/1ff2ee2d16aa3edd66e8f07f11321eb9b9cd478307d87674c633ba9b081a/biom-format-2.1.3.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.3 2023-01-03T19:07:33,019 Found link https://files.pythonhosted.org/packages/2e/8e/f8575e51764697c485f7e81dfc31ff72d8b2c4b50e88c23094be65814451/biom-format-2.1.4.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.4 2023-01-03T19:07:33,020 Found link https://files.pythonhosted.org/packages/e8/74/9b7e50c29ba548cd53eb97fb9cc1f05a2cf53aa179a64f36e93282b84f79/biom-format-2.1.5.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.5 2023-01-03T19:07:33,021 Found link https://files.pythonhosted.org/packages/46/a6/fccc2f5db587d7d896b52054aa5a9f0f7fd8fb6ad23ab9a02934d4cb1739/biom-format-2.1.6.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.6 2023-01-03T19:07:33,021 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/c2/10/ed278d6263ad222b5327f127f07afaadff7dc7ae8482592b9c05500e976d/biom_format-2.1.6-cp27-cp27m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-01-03T19:07:33,022 Found link https://files.pythonhosted.org/packages/25/92/ca4688a006b784bcc1f118c4a53e9aadc78d78abf8ff58ee11d29ac950a4/biom-format-2.1.7.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.7 2023-01-03T19:07:33,023 Skipping link: No binaries permitted for biom-format: https://files.pythonhosted.org/packages/d1/84/0521b9203bb525c2d6a06905be950f29ca98e60a12dca71dfd18bffe7d92/biom_format-2.1.7-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/biom-format/) 2023-01-03T19:07:33,023 Found link https://files.pythonhosted.org/packages/c1/c6/3b4284680b390a6c0a39de2fddddfe19a28d1bdceb5951713c483c147f44/biom-format-2.1.8-1.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.8-1 2023-01-03T19:07:33,024 Found link https://files.pythonhosted.org/packages/4b/50/65e535736597ce91e82a8e3e83cf1e88735368b58f99585f600b854f0bc9/biom-format-2.1.9.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.9 2023-01-03T19:07:33,025 Found link https://files.pythonhosted.org/packages/2b/8f/ef865d43a06dd3d1b09808fbd129074e64127fa8db0b93b5e0cf1d1a50de/biom-format-2.1.10.tar.gz (from https://pypi.org/simple/biom-format/), version: 2.1.10 2023-01-03T19:07:33,026 Found link https://files.pythonhosted.org/packages/fc/3f/7eb762b52f490b810b1686fd41cd6f3f7f33c0dab29c4273c96e9a1641a2/biom-format-2.1.12.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.12 2023-01-03T19:07:33,028 Found link https://files.pythonhosted.org/packages/90/57/0a326e17005b25e56f6e25b8b1e3eae299b7f6d53af06b11c4830d631612/biom-format-2.1.13.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.13 2023-01-03T19:07:33,029 Found link https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz (from https://pypi.org/simple/biom-format/) (requires-python:>=3.6), version: 2.1.14 2023-01-03T19:07:33,030 Fetching project page and analyzing links: https://www.piwheels.org/simple/biom-format/ 2023-01-03T19:07:33,031 Getting page https://www.piwheels.org/simple/biom-format/ 2023-01-03T19:07:33,033 Found index url https://www.piwheels.org/simple 2023-01-03T19:07:33,248 Fetched page https://www.piwheels.org/simple/biom-format/ as text/html 2023-01-03T19:07:33,312 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv7l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-01-03T19:07:33,313 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp39-cp39-linux_armv6l.whl#sha256=80b341578111894f67221800901df758240597ef524df0db82477061329f821a (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-01-03T19:07:33,314 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv7l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-01-03T19:07:33,314 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.13-cp37-cp37m-linux_armv6l.whl#sha256=497b24d7afb924a1d676e19148c410da9bcf85cd8edb8a94151b5e550426311b (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-01-03T19:07:33,315 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.12-cp39-cp39-linux_armv7l.whl#sha256=28c6a62b9565f15dad3e58c960d180ab30f76bbf4bc1dfb23b38d7fdbae87af5 (from https://www.piwheels.org/simple/biom-format/) (requires-python:>=3.6) 2023-01-03T19:07:33,315 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1.9-cp39-cp39-linux_armv7l.whl#sha256=641ee241e0ead8290929acb06fdb0566b903d9df28a2e24a2e96cbe71ba5a839 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,321 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.9-cp39-cp39-linux_armv6l.whl#sha256=641ee241e0ead8290929acb06fdb0566b903d9df28a2e24a2e96cbe71ba5a839 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,321 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.9-cp37-cp37m-linux_armv7l.whl#sha256=705f44a568a2b7cf92d5f3cc971e321a7b5027c85a0e02ee8a517d2fe884c326 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,322 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1.5-cp39-cp39-linux_armv7l.whl#sha256=b76e64877acf4dafbd8e69682f179074c84f99ed8eac23ce895276a806d23a70 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,330 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.5-cp39-cp39-linux_armv6l.whl#sha256=b76e64877acf4dafbd8e69682f179074c84f99ed8eac23ce895276a806d23a70 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,331 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.5-cp37-cp37m-linux_armv7l.whl#sha256=53ddaf3c5a8f9ee5f76d8b3f37971c11fb6a6019c029a8e92082fc6fa7f8ba31 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,331 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1.5-cp35-cp35m-linux_armv6l.whl#sha256=a0f0fc76087cf6a629f32ba185bd908d828650a901dd22f2a533df1822ec3f8a (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,334 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.5-cp35-cp35m-linux_armv7l.whl#sha256=a0f0fc76087cf6a629f32ba185bd908d828650a901dd22f2a533df1822ec3f8a (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,334 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.4-cp39-cp39-linux_armv7l.whl#sha256=b5ca1e518cddf6b4c1a9c1dbd3e186b9a6133758fa1aa307f3f050bd3311c0f9 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,335 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.4-cp39-cp39-linux_armv6l.whl#sha256=b5ca1e518cddf6b4c1a9c1dbd3e186b9a6133758fa1aa307f3f050bd3311c0f9 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,335 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.4-cp37-cp37m-linux_armv6l.whl#sha256=7b97db63d322d631c17f4def28ddc7f52bdcac056b198386abc89760a7ae9bd2 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,336 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.4-cp37-cp37m-linux_armv7l.whl#sha256=7b97db63d322d631c17f4def28ddc7f52bdcac056b198386abc89760a7ae9bd2 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,336 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1.4-cp35-cp35m-linux_armv7l.whl#sha256=19255066e4e213d87b894744e71d700badf6d84a7809512bace0320d73b21f12 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,338 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp39-cp39-linux_armv7l.whl#sha256=cbb92ecf56d7051df6a9f3f851e39e1efc3be3e1f1f7b9b9100f430773310fc2 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,339 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp39-cp39-linux_armv6l.whl#sha256=cbb92ecf56d7051df6a9f3f851e39e1efc3be3e1f1f7b9b9100f430773310fc2 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,339 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp37-cp37m-linux_armv6l.whl#sha256=1d2c9b5f7ed5fbc16b4e223c1b722e66d3eb3d0e948150bd7f493b0da74efae7 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,340 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp37-cp37m-linux_armv7l.whl#sha256=1d2c9b5f7ed5fbc16b4e223c1b722e66d3eb3d0e948150bd7f493b0da74efae7 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,340 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp35-cp35m-linux_armv7l.whl#sha256=f5dc9ff3714eb8736eb934864b11d46bd397b464e6608ca59a98a95ac2406fc4 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,341 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp35-cp35m-linux_armv6l.whl#sha256=f5dc9ff3714eb8736eb934864b11d46bd397b464e6608ca59a98a95ac2406fc4 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,341 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp34-cp34m-linux_armv7l.whl#sha256=01a7200b8c5dae25fd6e64e6f87c324936b8fc643f4e6115414d8e1bcf151c0c (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,342 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.3-cp34-cp34m-linux_armv6l.whl#sha256=01a7200b8c5dae25fd6e64e6f87c324936b8fc643f4e6115414d8e1bcf151c0c (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,342 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=e8baea6999808dcd1996f305b77b12157f3cae25438816a34826368b7c85c1df (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,343 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=e8baea6999808dcd1996f305b77b12157f3cae25438816a34826368b7c85c1df (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,343 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp35-cp35m-linux_armv6l.whl#sha256=53be60ce9ee393f20c069efbb8df486c43b46b96e06f3b22ffe9cb63bfff432d (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,344 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp35-cp35m-linux_armv7l.whl#sha256=53be60ce9ee393f20c069efbb8df486c43b46b96e06f3b22ffe9cb63bfff432d (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,345 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=7c0f9ba8f33ed3a56071c38e74a1b91792530058a5fac6e79a6f193bbd7bdd27 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,345 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=7c0f9ba8f33ed3a56071c38e74a1b91792530058a5fac6e79a6f193bbd7bdd27 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,346 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp34-cp34m-linux_armv7l.whl#sha256=1c4063ac32a208b85d2b41b62887f20de6c2b25902b3d946c5cc1440a9185421 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,346 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1.2-cp34-cp34m-linux_armv6l.whl#sha256=1c4063ac32a208b85d2b41b62887f20de6c2b25902b3d946c5cc1440a9185421 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,347 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp39-cp39-linux_armv7l.whl#sha256=04f3a0c8fe42dbbaffb498aada51a9b035b206ba20bb943d4e5fc3413120b7d3 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,347 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.1-cp35-cp35m-linux_armv7l.whl#sha256=3f2a1b568c31077f0158d5c362ce35bf12b8113fa9d1e1b1b4ceef14d9828a61 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,351 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=d6182bef514f635438b834481309528194ee4cce9ca22cbebd602f0fd535ec3d (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,351 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=d6182bef514f635438b834481309528194ee4cce9ca22cbebd602f0fd535ec3d (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,352 Skipping link: No binaries permitted for biom-format: 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https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp34-cp34m-linux_armv7l.whl#sha256=65a3ba75376f8e5cacf4f89448fcc9ca10489d5a7203a89b71e8d9c71919fe33 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,359 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-2.0.0-cp34-cp34m-linux_armv6l.whl#sha256=65a3ba75376f8e5cacf4f89448fcc9ca10489d5a7203a89b71e8d9c71919fe33 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,359 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.3.1-py3-none-any.whl#sha256=f0b5649cb13509667e6ca75c84e68a1ff1de6716848e8d4f9a3ca8f8ca74b8df (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,360 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.3.0-py3-none-any.whl#sha256=ee9d81bea91a7c7da55697863c1b003aca4d14b7f7416fcb8c22e169e54aabe6 (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,360 Skipping link: No binaries permitted for biom-format: https://www.piwheels.org/simple/biom-format/biom_format-1.2.0.dev0-py3-none-any.whl#sha256=1c6e81249da6f3e19dd7594733329820632b1b6b0355abe79af180116c3b8aba (from https://www.piwheels.org/simple/biom-format/) 2023-01-03T19:07:33,361 Skipping link: not a file: https://www.piwheels.org/simple/biom-format/ 2023-01-03T19:07:33,361 Skipping link: not a file: https://pypi.org/simple/biom-format/ 2023-01-03T19:07:33,404 Given no hashes to check 1 links for project 'biom-format': discarding no candidates 2023-01-03T19:07:33,434 Collecting biom-format==2.1.14 2023-01-03T19:07:33,439 Created temporary directory: /tmp/pip-unpack-3qv4txsm 2023-01-03T19:07:34,375 Downloading biom-format-2.1.14.tar.gz (11.7 MB) 2023-01-03T19:07:44,610 Added biom-format==2.1.14 from https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz to build tracker '/tmp/pip-build-tracker-t1im_1w2' 2023-01-03T19:07:44,621 Created temporary directory: /tmp/pip-build-env-b3tzqwsb 2023-01-03T19:07:44,634 Installing build dependencies: started 2023-01-03T19:07:44,636 Running command pip subprocess to install build dependencies 2023-01-03T19:07:47,394 Using pip 22.3 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-01-03T19:07:48,405 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-03T19:07:48,460 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-03T19:07:52,345 Collecting setuptools 2023-01-03T19:07:52,637 Using cached https://www.piwheels.org/simple/setuptools/setuptools-65.6.3-py3-none-any.whl (1.2 MB) 2023-01-03T19:07:53,289 Collecting wheel 2023-01-03T19:07:53,323 Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB) 2023-01-03T19:07:55,222 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/50/e1/9b0c184f04b8cf5f3c941ffa56fbcbe936888bdac9aa7ba6bae405ac752b/numpy-1.22.0.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,235 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0a/c8/a62767a6b374a0dfb02d2a0456e5f56a372cdd1689dbc6ffb6bf1ddedbc0/numpy-1.22.1.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,246 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e9/6c/c0a8130fe198f27bab92f1b28631e0cc2572295f6b7a31e87efe7448aa1c/numpy-1.22.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,258 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/64/4a/b008d1f8a7b9f5206ecf70a53f84e654707e7616a771d84c05151a4713e9/numpy-1.22.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,270 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f6/d8/ab692a75f584d13c6542c3994f75def5bce52ded9399f52e230fe402819d/numpy-1.22.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,282 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/33/ad/fc5e3fd1077622b2b32fc3fd36176b36475b63da486eb5578d7f8fb2af29/numpy-1.23.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,295 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/7b/bc/05e61801a3689f81c8569c057c61fd1d302e989be5c96f6ce7acee46250a/numpy-1.23.0rc2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,307 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/a2/bf/1502d20b4a7f5d5f74c5242748834aaf8cd6ff7cb40b7c64ef58ba47a751/numpy-1.23.0rc3.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,320 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/03/c6/14a17e10813b8db20d1e800ff9a3a898e65d25f2b0e9d6a94616f1e3362c/numpy-1.23.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,332 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/13/b1/0c22aa7ca1deda4915cdec9562f839546bb252eecf6ad596eaec0592bd35/numpy-1.23.1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,347 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f4/66/17b8e95770478436bf968353c89683ce6f9e14d92e0d4fb3111c09ba18d2/numpy-1.23.2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,362 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0a/88/f4f0c7a982efdf7bf22f283acf6009b29a9cc5835b684a49f8d3a4adb22f/numpy-1.23.3.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,377 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/64/8e/9929b64e146d240507edaac2185cd5516f00b133be5b39250d253be25a64/numpy-1.23.4.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,392 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/42/38/775b43da55fa7473015eddc9a819571517d9a271a9f8134f68fb9be2f212/numpy-1.23.5.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,411 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/8a/b0/bb59e52e4eb90a42fbff1a90d57c45265fa3133c533e67842757068fc731/numpy-1.24.0rc1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,432 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/da/d9/f27cf8e76b9bb015802cb347f208a32383299fd5e30965735a82a92902ae/numpy-1.24.0rc2.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,449 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/5f/c7/5ca7c100dcc85b5ef1b176bdf87be5e4392c2c3018e13cc7cdef828c6a09/numpy-1.24.0.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:55,466 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ce/b8/c170db50ec49d5845bd771bc5549fe734ee73083c5c52791915f95d8e2bc/numpy-1.24.1.tar.gz (from https://pypi.org/simple/numpy/) (requires-python:>=3.8) 2023-01-03T19:07:56,085 Collecting numpy 2023-01-03T19:07:58,607 Using cached https://www.piwheels.org/simple/numpy/numpy-1.21.4-cp37-cp37m-linux_armv7l.whl (12.3 MB) 2023-01-03T19:08:03,050 Collecting cython 2023-01-03T19:08:03,547 Using cached https://www.piwheels.org/simple/cython/Cython-0.29.32-cp37-cp37m-linux_armv7l.whl (2.3 MB) 2023-01-03T19:08:11,035 Installing collected packages: wheel, setuptools, numpy, cython 2023-01-03T19:08:11,321 Creating /tmp/pip-build-env-b3tzqwsb/overlay/bin 2023-01-03T19:08:11,326 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/wheel to 755 2023-01-03T19:08:32,194 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/f2py to 755 2023-01-03T19:08:32,199 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/f2py3 to 755 2023-01-03T19:08:32,204 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/f2py3.7 to 755 2023-01-03T19:08:37,476 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/cygdb to 755 2023-01-03T19:08:37,481 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/cython to 755 2023-01-03T19:08:37,485 changing mode of /tmp/pip-build-env-b3tzqwsb/overlay/bin/cythonize to 755 2023-01-03T19:08:37,539 Successfully installed cython-0.29.32 numpy-1.21.4 setuptools-65.6.3 wheel-0.38.4 2023-01-03T19:08:37,578 [notice] A new release of pip available: 22.3 -> 22.3.1 2023-01-03T19:08:37,579 [notice] To update, run: python3 -m pip install --upgrade pip 2023-01-03T19:08:38,190 Installing build dependencies: finished with status 'done' 2023-01-03T19:08:38,219 Getting requirements to build wheel: started 2023-01-03T19:08:38,221 Running command Getting requirements to build wheel 2023-01-03T19:08:48,335 Compiling biom/_filter.pyx because it changed. 2023-01-03T19:08:48,337 Compiling biom/_transform.pyx because it changed. 2023-01-03T19:08:48,337 Compiling biom/_subsample.pyx because it changed. 2023-01-03T19:08:48,337 [1/3] Cythonizing biom/_filter.pyx 2023-01-03T19:08:48,338 [2/3] Cythonizing biom/_subsample.pyx 2023-01-03T19:08:48,338 [3/3] Cythonizing biom/_transform.pyx 2023-01-03T19:08:48,818 running egg_info 2023-01-03T19:08:48,836 writing biom_format.egg-info/PKG-INFO 2023-01-03T19:08:48,840 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-01-03T19:08:48,844 writing entry points to biom_format.egg-info/entry_points.txt 2023-01-03T19:08:48,847 writing requirements to biom_format.egg-info/requires.txt 2023-01-03T19:08:48,849 writing top-level names to biom_format.egg-info/top_level.txt 2023-01-03T19:08:48,920 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:48,977 reading manifest template 'MANIFEST.in' 2023-01-03T19:08:49,004 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-i4ukmjda/biom-format_44553b0359c249a194f2574714b6d746/biom/_filter.pyx 2023-01-03T19:08:49,005 tree = Parsing.p_module(s, pxd, full_module_name) 2023-01-03T19:08:49,005 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-i4ukmjda/biom-format_44553b0359c249a194f2574714b6d746/biom/_subsample.pyx 2023-01-03T19:08:49,006 tree = Parsing.p_module(s, pxd, full_module_name) 2023-01-03T19:08:49,006 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-i4ukmjda/biom-format_44553b0359c249a194f2574714b6d746/biom/_transform.pyx 2023-01-03T19:08:49,006 tree = Parsing.p_module(s, pxd, full_module_name) 2023-01-03T19:08:49,007 warning: no directories found matching 'support_files' 2023-01-03T19:08:49,023 warning: no directories found matching 'tests/test_data' 2023-01-03T19:08:49,025 no previously-included directories found matching 'docs/_build' 2023-01-03T19:08:49,029 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-01-03T19:08:49,033 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-01-03T19:08:49,036 warning: no previously-included files matching '.git' found anywhere in distribution 2023-01-03T19:08:49,043 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-01-03T19:08:49,046 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-01-03T19:08:49,046 adding license file 'COPYING.txt' 2023-01-03T19:08:49,079 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:49,515 Getting requirements to build wheel: finished with status 'done' 2023-01-03T19:08:49,537 Created temporary directory: /tmp/pip-modern-metadata-qxm8kp67 2023-01-03T19:08:49,543 Preparing metadata (pyproject.toml): started 2023-01-03T19:08:49,545 Running command Preparing metadata (pyproject.toml) 2023-01-03T19:08:54,095 running dist_info 2023-01-03T19:08:54,142 creating /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info 2023-01-03T19:08:54,155 writing /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/PKG-INFO 2023-01-03T19:08:54,159 writing dependency_links to /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/dependency_links.txt 2023-01-03T19:08:54,163 writing entry points to /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/entry_points.txt 2023-01-03T19:08:54,166 writing requirements to /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/requires.txt 2023-01-03T19:08:54,168 writing top-level names to /tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/top_level.txt 2023-01-03T19:08:54,171 writing manifest file '/tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:54,238 reading manifest file '/tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:54,245 reading manifest template 'MANIFEST.in' 2023-01-03T19:08:54,267 warning: no directories found matching 'support_files' 2023-01-03T19:08:54,279 warning: no directories found matching 'tests/test_data' 2023-01-03T19:08:54,281 no previously-included directories found matching 'docs/_build' 2023-01-03T19:08:54,284 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-01-03T19:08:54,287 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-01-03T19:08:54,289 warning: no previously-included files matching '.git' found anywhere in distribution 2023-01-03T19:08:54,294 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-01-03T19:08:54,296 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-01-03T19:08:54,296 adding license file 'COPYING.txt' 2023-01-03T19:08:54,321 writing manifest file '/tmp/pip-modern-metadata-qxm8kp67/biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:54,324 creating '/tmp/pip-modern-metadata-qxm8kp67/biom_format-2.1.14.dist-info' 2023-01-03T19:08:54,816 Preparing metadata (pyproject.toml): finished with status 'done' 2023-01-03T19:08:54,831 Source in /tmp/pip-wheel-i4ukmjda/biom-format_44553b0359c249a194f2574714b6d746 has version 2.1.14, which satisfies requirement biom-format==2.1.14 from https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz 2023-01-03T19:08:54,834 Removed biom-format==2.1.14 from https://files.pythonhosted.org/packages/8e/2c/132267e58172821fc15fa3856f53ed09b607837fe06e2bb60b230005951d/biom-format-2.1.14.tar.gz from build tracker '/tmp/pip-build-tracker-t1im_1w2' 2023-01-03T19:08:54,847 Created temporary directory: /tmp/pip-unpack-wpu9eaph 2023-01-03T19:08:54,849 Building wheels for collected packages: biom-format 2023-01-03T19:08:54,858 Created temporary directory: /tmp/pip-wheel-6ejbd38z 2023-01-03T19:08:54,859 Destination directory: /tmp/pip-wheel-6ejbd38z 2023-01-03T19:08:54,870 Building wheel for biom-format (pyproject.toml): started 2023-01-03T19:08:54,872 Running command Building wheel for biom-format (pyproject.toml) 2023-01-03T19:08:59,266 running bdist_wheel 2023-01-03T19:08:59,319 running build 2023-01-03T19:08:59,319 running build_py 2023-01-03T19:08:59,339 creating build 2023-01-03T19:08:59,340 creating build/lib.linux-armv7l-cpython-37 2023-01-03T19:08:59,341 creating build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,344 copying biom/table.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,357 copying biom/parse.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,363 copying biom/err.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,367 copying biom/util.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,372 copying biom/__init__.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,376 copying biom/exception.py -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,381 creating build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,383 copying biom/tests/long_lines.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,387 copying biom/tests/test_util.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,393 copying biom/tests/test_err.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,397 copying biom/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,400 copying biom/tests/test_parse.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,408 copying biom/tests/test_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests 2023-01-03T19:08:59,423 creating build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,426 copying biom/cli/installation_informer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,431 copying biom/cli/metadata_exporter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,435 copying biom/cli/table_subsetter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,441 copying biom/cli/table_ids.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,444 copying biom/cli/table_validator.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,450 copying biom/cli/util.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,453 copying biom/cli/metadata_adder.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,458 copying biom/cli/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,461 copying biom/cli/table_normalizer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,465 copying biom/cli/table_head.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,469 copying biom/cli/table_summarizer.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,473 copying biom/cli/table_converter.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,477 copying biom/cli/uc_processor.py -> build/lib.linux-armv7l-cpython-37/biom/cli 2023-01-03T19:08:59,482 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:08:59,484 copying biom/tests/test_data/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:08:59,489 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,491 copying biom/tests/test_cli/test_table_normalizer.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,495 copying biom/tests/test_cli/test_uc_processor.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,499 copying biom/tests/test_cli/test_validate_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,504 copying biom/tests/test_cli/test_show_install_info.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,508 copying biom/tests/test_cli/test_add_metadata.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,513 copying biom/tests/test_cli/test_subset_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,516 copying biom/tests/test_cli/__init__.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,520 copying biom/tests/test_cli/test_summarize_table.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,524 copying biom/tests/test_cli/test_table_converter.py -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli 2023-01-03T19:08:59,528 running egg_info 2023-01-03T19:08:59,577 writing biom_format.egg-info/PKG-INFO 2023-01-03T19:08:59,581 writing dependency_links to biom_format.egg-info/dependency_links.txt 2023-01-03T19:08:59,584 writing entry points to biom_format.egg-info/entry_points.txt 2023-01-03T19:08:59,586 writing requirements to biom_format.egg-info/requires.txt 2023-01-03T19:08:59,588 writing top-level names to biom_format.egg-info/top_level.txt 2023-01-03T19:08:59,617 reading manifest file 'biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:59,677 reading manifest template 'MANIFEST.in' 2023-01-03T19:08:59,700 warning: no directories found matching 'support_files' 2023-01-03T19:08:59,712 warning: no directories found matching 'tests/test_data' 2023-01-03T19:08:59,715 no previously-included directories found matching 'docs/_build' 2023-01-03T19:08:59,719 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-01-03T19:08:59,722 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-01-03T19:08:59,725 warning: no previously-included files matching '.git' found anywhere in distribution 2023-01-03T19:08:59,732 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-01-03T19:08:59,735 warning: no previously-included files matching '.*.swp' found anywhere in distribution 2023-01-03T19:08:59,736 adding license file 'COPYING.txt' 2023-01-03T19:08:59,768 writing manifest file 'biom_format.egg-info/SOURCES.txt' 2023-01-03T19:08:59,821 copying biom/_filter.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,826 copying biom/_subsample.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,830 copying biom/_transform.pyx -> build/lib.linux-armv7l-cpython-37/biom 2023-01-03T19:08:59,834 creating build/lib.linux-armv7l-cpython-37/biom/assets 2023-01-03T19:08:59,836 copying biom/assets/exercise_api.py -> build/lib.linux-armv7l-cpython-37/biom/assets 2023-01-03T19:08:59,841 copying biom/assets/exercise_cli.sh -> build/lib.linux-armv7l-cpython-37/biom/assets 2023-01-03T19:08:59,845 creating build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:08:59,847 copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:08:59,864 copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:08:59,909 copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:00,004 copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:00,045 copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:00,885 copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,122 copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,132 copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,153 copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,178 copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,207 copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,350 copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,444 copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,450 copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,471 copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,478 copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,500 copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,517 copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,543 copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,548 copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,567 copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,573 copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,592 copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,599 copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,618 copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,626 copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,647 copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,668 copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,702 copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,803 copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,906 copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,911 copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,921 copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,928 copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,938 copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,955 copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,965 copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,969 copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,978 copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,983 copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,991 copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:01,998 copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,006 copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,010 copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,017 copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,022 copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,029 copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,033 copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,041 copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,046 copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,068 copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,075 copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,097 copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,115 copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,149 copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,153 copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,162 copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,166 copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,175 copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,181 copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,190 copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,195 copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,202 copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,206 copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,212 copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,216 copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,223 copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,228 copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,234 copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,238 copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,243 copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,247 copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,253 copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,259 copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,280 copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,286 copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,306 copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,313 copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,334 copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,338 copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,346 copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,351 copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,360 copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,365 copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,372 copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,376 copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,383 copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,387 copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,394 copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,397 copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,404 copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,408 copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,414 copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,418 copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,424 copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,428 copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables 2023-01-03T19:09:02,434 copying biom/tests/test_data/bad_table.txt -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,438 copying biom/tests/test_data/bad_table.txt.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,441 copying biom/tests/test_data/empty.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,447 copying biom/tests/test_data/no-contents.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,450 copying biom/tests/test_data/test.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,457 copying biom/tests/test_data/test.json -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,461 copying biom/tests/test_data/test.json.gz -> build/lib.linux-armv7l-cpython-37/biom/tests/test_data 2023-01-03T19:09:02,465 creating build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-01-03T19:09:02,466 copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-01-03T19:09:02,471 copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-01-03T19:09:02,474 copying biom/tests/test_cli/test_data/test.biom -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-01-03T19:09:02,481 copying biom/tests/test_cli/test_data/test.json -> build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data 2023-01-03T19:09:02,494 running build_ext 2023-01-03T19:09:02,504 building 'biom._filter' extension 2023-01-03T19:09:02,506 creating build/temp.linux-armv7l-cpython-37 2023-01-03T19:09:02,506 creating build/temp.linux-armv7l-cpython-37/biom 2023-01-03T19:09:02,508 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-armv7l-cpython-37/biom/_filter.o 2023-01-03T19:09:03,186 In file included from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-01-03T19:09:03,187 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-03T19:09:03,187 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-01-03T19:09:03,187 from biom/_filter.c:768: 2023-01-03T19:09:03,188 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-03T19:09:03,188 #warning "Using deprecated NumPy API, disable it with " \ 2023-01-03T19:09:03,189 ^~~~~~~ 2023-01-03T19:09:21,419 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_filter.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_filter.cpython-37m-arm-linux-gnueabihf.so 2023-01-03T19:09:35,716 building 'biom._transform' extension 2023-01-03T19:09:35,718 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-armv7l-cpython-37/biom/_transform.o 2023-01-03T19:09:36,351 In file included from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-01-03T19:09:36,352 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-03T19:09:36,352 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-01-03T19:09:36,353 from biom/_transform.c:768: 2023-01-03T19:09:36,353 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-03T19:09:36,354 #warning "Using deprecated NumPy API, disable it with " \ 2023-01-03T19:09:36,354 ^~~~~~~ 2023-01-03T19:09:42,332 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_transform.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_transform.cpython-37m-arm-linux-gnueabihf.so 2023-01-03T19:09:46,958 building 'biom._subsample' extension 2023-01-03T19:09:46,959 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-armv7l-cpython-37/biom/_subsample.o 2023-01-03T19:09:47,601 In file included from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2023-01-03T19:09:47,601 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-01-03T19:09:47,602 from /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2023-01-03T19:09:47,602 from biom/_subsample.c:768: 2023-01-03T19:09:47,602 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-01-03T19:09:47,603 #warning "Using deprecated NumPy API, disable it with " \ 2023-01-03T19:09:47,603 ^~~~~~~ 2023-01-03T19:10:00,888 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/biom/_subsample.o -L/usr/lib -o build/lib.linux-armv7l-cpython-37/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so 2023-01-03T19:10:11,296 installing to build/bdist.linux-armv7l/wheel 2023-01-03T19:10:11,296 running install 2023-01-03T19:10:11,360 running install_lib 2023-01-03T19:10:11,378 creating build/bdist.linux-armv7l 2023-01-03T19:10:11,379 creating build/bdist.linux-armv7l/wheel 2023-01-03T19:10:11,383 creating build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:11,386 creating build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:11,388 copying build/lib.linux-armv7l-cpython-37/biom/tests/long_lines.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:11,397 creating build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,399 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,423 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,430 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,440 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,460 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,482 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,501 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,507 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,517 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,523 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,568 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,589 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,594 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,614 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:11,622 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,511 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,520 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,523 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,539 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,568 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,591 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,612 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,632 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,640 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,645 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,650 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,655 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,659 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,662 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,668 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,672 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,677 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,681 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,690 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,698 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,713 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,717 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,722 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,726 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:12,829 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,038 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,045 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,054 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,058 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,064 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,072 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,102 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,117 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,122 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,128 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,148 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,155 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,159 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,163 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,303 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,309 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,312 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,317 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,338 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,342 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,349 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,354 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,359 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,460 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,467 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,475 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,481 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,502 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,535 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,539 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,562 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,566 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,592 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,599 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,604 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,609 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,617 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,622 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,626 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,632 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,640 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,649 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,655 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,665 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,671 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,808 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,832 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,932 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,976 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:13,980 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,009 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,012 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,016 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,024 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,030 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,034 copying build/lib.linux-armv7l-cpython-37/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> build/bdist.linux-armv7l/wheel/biom/tests/bench_tables 2023-01-03T19:10:14,041 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_util.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:14,047 creating build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,049 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,053 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/bad_table.txt -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,056 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/empty.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,062 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,068 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/no-contents.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,072 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/bad_table.txt.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,076 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,080 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_data/test.json.gz -> build/bdist.linux-armv7l/wheel/biom/tests/test_data 2023-01-03T19:10:14,084 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_err.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:14,089 copying build/lib.linux-armv7l-cpython-37/biom/tests/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:14,093 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_parse.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:14,102 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,105 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,109 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,115 creating build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-01-03T19:10:14,116 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/test.json -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-01-03T19:10:14,121 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/test.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-01-03T19:10:14,128 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-01-03T19:10:14,132 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli/test_data 2023-01-03T19:10:14,135 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_validate_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,141 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_show_install_info.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,144 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_add_metadata.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,149 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_subset_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,153 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,156 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_summarize_table.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,161 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_cli/test_table_converter.py -> build/bdist.linux-armv7l/wheel/biom/tests/test_cli 2023-01-03T19:10:14,165 copying build/lib.linux-armv7l-cpython-37/biom/tests/test_table.py -> build/bdist.linux-armv7l/wheel/biom/tests 2023-01-03T19:10:14,180 copying build/lib.linux-armv7l-cpython-37/biom/_transform.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,190 copying build/lib.linux-armv7l-cpython-37/biom/table.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,204 copying build/lib.linux-armv7l-cpython-37/biom/parse.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,211 creating build/bdist.linux-armv7l/wheel/biom/assets 2023-01-03T19:10:14,212 copying build/lib.linux-armv7l-cpython-37/biom/assets/exercise_api.py -> build/bdist.linux-armv7l/wheel/biom/assets 2023-01-03T19:10:14,216 copying build/lib.linux-armv7l-cpython-37/biom/assets/exercise_cli.sh -> build/bdist.linux-armv7l/wheel/biom/assets 2023-01-03T19:10:14,221 creating build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,223 copying build/lib.linux-armv7l-cpython-37/biom/cli/installation_informer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,227 copying build/lib.linux-armv7l-cpython-37/biom/cli/metadata_exporter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,230 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_subsetter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,234 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_ids.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,238 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_validator.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,243 copying build/lib.linux-armv7l-cpython-37/biom/cli/util.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,246 copying build/lib.linux-armv7l-cpython-37/biom/cli/metadata_adder.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,251 copying build/lib.linux-armv7l-cpython-37/biom/cli/__init__.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,255 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_normalizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,258 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_head.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,262 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_summarizer.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,266 copying build/lib.linux-armv7l-cpython-37/biom/cli/table_converter.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,271 copying build/lib.linux-armv7l-cpython-37/biom/cli/uc_processor.py -> build/bdist.linux-armv7l/wheel/biom/cli 2023-01-03T19:10:14,275 copying build/lib.linux-armv7l-cpython-37/biom/err.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,280 copying build/lib.linux-armv7l-cpython-37/biom/_filter.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,291 copying build/lib.linux-armv7l-cpython-37/biom/util.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,297 copying build/lib.linux-armv7l-cpython-37/biom/__init__.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,301 copying build/lib.linux-armv7l-cpython-37/biom/_filter.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,306 copying build/lib.linux-armv7l-cpython-37/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,320 copying build/lib.linux-armv7l-cpython-37/biom/_subsample.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,323 copying build/lib.linux-armv7l-cpython-37/biom/_transform.pyx -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,327 copying build/lib.linux-armv7l-cpython-37/biom/exception.py -> build/bdist.linux-armv7l/wheel/biom 2023-01-03T19:10:14,330 running install_egg_info 2023-01-03T19:10:14,360 Copying biom_format.egg-info to build/bdist.linux-armv7l/wheel/biom_format-2.1.14-py3.7.egg-info 2023-01-03T19:10:14,387 running install_scripts 2023-01-03T19:10:14,555 creating build/bdist.linux-armv7l/wheel/biom_format-2.1.14.dist-info/WHEEL 2023-01-03T19:10:14,561 creating '/tmp/pip-wheel-6ejbd38z/.tmp-rg4t1_wa/biom_format-2.1.14-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-03T19:10:14,567 adding 'biom/__init__.py' 2023-01-03T19:10:14,640 adding 'biom/_filter.cpython-37m-arm-linux-gnueabihf.so' 2023-01-03T19:10:14,647 adding 'biom/_filter.pyx' 2023-01-03T19:10:14,703 adding 'biom/_subsample.cpython-37m-arm-linux-gnueabihf.so' 2023-01-03T19:10:14,708 adding 'biom/_subsample.pyx' 2023-01-03T19:10:14,748 adding 'biom/_transform.cpython-37m-arm-linux-gnueabihf.so' 2023-01-03T19:10:14,753 adding 'biom/_transform.pyx' 2023-01-03T19:10:14,758 adding 'biom/err.py' 2023-01-03T19:10:14,761 adding 'biom/exception.py' 2023-01-03T19:10:14,768 adding 'biom/parse.py' 2023-01-03T19:10:14,821 adding 'biom/table.py' 2023-01-03T19:10:14,831 adding 'biom/util.py' 2023-01-03T19:10:14,835 adding 'biom/assets/exercise_api.py' 2023-01-03T19:10:14,838 adding 'biom/assets/exercise_cli.sh' 2023-01-03T19:10:14,842 adding 'biom/cli/__init__.py' 2023-01-03T19:10:14,845 adding 'biom/cli/installation_informer.py' 2023-01-03T19:10:14,849 adding 'biom/cli/metadata_adder.py' 2023-01-03T19:10:14,852 adding 'biom/cli/metadata_exporter.py' 2023-01-03T19:10:14,855 adding 'biom/cli/table_converter.py' 2023-01-03T19:10:14,858 adding 'biom/cli/table_head.py' 2023-01-03T19:10:14,861 adding 'biom/cli/table_ids.py' 2023-01-03T19:10:14,864 adding 'biom/cli/table_normalizer.py' 2023-01-03T19:10:14,867 adding 'biom/cli/table_subsetter.py' 2023-01-03T19:10:14,870 adding 'biom/cli/table_summarizer.py' 2023-01-03T19:10:14,876 adding 'biom/cli/table_validator.py' 2023-01-03T19:10:14,879 adding 'biom/cli/uc_processor.py' 2023-01-03T19:10:14,882 adding 'biom/cli/util.py' 2023-01-03T19:10:14,886 adding 'biom/tests/__init__.py' 2023-01-03T19:10:14,889 adding 'biom/tests/long_lines.py' 2023-01-03T19:10:14,892 adding 'biom/tests/test_err.py' 2023-01-03T19:10:14,902 adding 'biom/tests/test_parse.py' 2023-01-03T19:10:14,939 adding 'biom/tests/test_table.py' 2023-01-03T19:10:14,947 adding 'biom/tests/test_util.py' 2023-01-03T19:10:14,976 adding 'biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz' 2023-01-03T19:10:15,235 adding 'biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:15,453 adding 'biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz' 2023-01-03T19:10:15,801 adding 'biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:17,311 adding 'biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz' 2023-01-03T19:10:18,643 adding 'biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:18,754 adding 'biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz' 2023-01-03T19:10:18,899 adding 'biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:18,979 adding 'biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz' 2023-01-03T19:10:19,171 adding 'biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:19,816 adding 'biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz' 2023-01-03T19:10:20,496 adding 'biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:20,539 adding 'biom/tests/bench_tables/10000x100x0.001_bench.biom.gz' 2023-01-03T19:10:20,664 adding 'biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:20,683 adding 'biom/tests/bench_tables/10000x100x0.010_bench.biom.gz' 2023-01-03T19:10:20,814 adding 'biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:20,866 adding 'biom/tests/bench_tables/10000x100x0.100_bench.biom.gz' 2023-01-03T19:10:21,029 adding 'biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:21,042 adding 'biom/tests/bench_tables/10000x10x0.001_bench.biom.gz' 2023-01-03T19:10:21,163 adding 'biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:21,175 adding 'biom/tests/bench_tables/10000x10x0.010_bench.biom.gz' 2023-01-03T19:10:21,298 adding 'biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:21,314 adding 'biom/tests/bench_tables/10000x10x0.100_bench.biom.gz' 2023-01-03T19:10:21,438 adding 'biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:21,457 adding 'biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz' 2023-01-03T19:10:21,595 adding 'biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:21,696 adding 'biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz' 2023-01-03T19:10:21,899 adding 'biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:22,670 adding 'biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz' 2023-01-03T19:10:23,541 adding 'biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:23,595 adding 'biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz' 2023-01-03T19:10:23,619 adding 'biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:23,627 adding 'biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz' 2023-01-03T19:10:23,652 adding 'biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:23,674 adding 'biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz' 2023-01-03T19:10:23,709 adding 'biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:23,714 adding 'biom/tests/bench_tables/1000x100x0.001_bench.biom.gz' 2023-01-03T19:10:23,729 adding 'biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:23,734 adding 'biom/tests/bench_tables/1000x100x0.010_bench.biom.gz' 2023-01-03T19:10:23,749 adding 'biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:23,759 adding 'biom/tests/bench_tables/1000x100x0.100_bench.biom.gz' 2023-01-03T19:10:23,777 adding 'biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:23,782 adding 'biom/tests/bench_tables/1000x10x0.001_bench.biom.gz' 2023-01-03T19:10:23,796 adding 'biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:23,800 adding 'biom/tests/bench_tables/1000x10x0.010_bench.biom.gz' 2023-01-03T19:10:23,814 adding 'biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:23,819 adding 'biom/tests/bench_tables/1000x10x0.100_bench.biom.gz' 2023-01-03T19:10:23,834 adding 'biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:23,841 adding 'biom/tests/bench_tables/100x10000x0.001_bench.biom.gz' 2023-01-03T19:10:23,963 adding 'biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:23,981 adding 'biom/tests/bench_tables/100x10000x0.010_bench.biom.gz' 2023-01-03T19:10:24,109 adding 'biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,192 adding 'biom/tests/bench_tables/100x10000x0.100_bench.biom.gz' 2023-01-03T19:10:24,385 adding 'biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,399 adding 'biom/tests/bench_tables/100x1000x0.001_bench.biom.gz' 2023-01-03T19:10:24,414 adding 'biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:24,419 adding 'biom/tests/bench_tables/100x1000x0.010_bench.biom.gz' 2023-01-03T19:10:24,433 adding 'biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,443 adding 'biom/tests/bench_tables/100x1000x0.100_bench.biom.gz' 2023-01-03T19:10:24,462 adding 'biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,467 adding 'biom/tests/bench_tables/100x100x0.001_bench.biom.gz' 2023-01-03T19:10:24,473 adding 'biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:24,477 adding 'biom/tests/bench_tables/100x100x0.010_bench.biom.gz' 2023-01-03T19:10:24,483 adding 'biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,487 adding 'biom/tests/bench_tables/100x100x0.100_bench.biom.gz' 2023-01-03T19:10:24,493 adding 'biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,497 adding 'biom/tests/bench_tables/100x10x0.001_bench.biom.gz' 2023-01-03T19:10:24,502 adding 'biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:24,506 adding 'biom/tests/bench_tables/100x10x0.010_bench.biom.gz' 2023-01-03T19:10:24,511 adding 'biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,515 adding 'biom/tests/bench_tables/100x10x0.100_bench.biom.gz' 2023-01-03T19:10:24,520 adding 'biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,526 adding 'biom/tests/bench_tables/10x10000x0.001_bench.biom.gz' 2023-01-03T19:10:24,647 adding 'biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:24,658 adding 'biom/tests/bench_tables/10x10000x0.010_bench.biom.gz' 2023-01-03T19:10:24,778 adding 'biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,794 adding 'biom/tests/bench_tables/10x10000x0.100_bench.biom.gz' 2023-01-03T19:10:24,932 adding 'biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,943 adding 'biom/tests/bench_tables/10x1000x0.001_bench.biom.gz' 2023-01-03T19:10:24,956 adding 'biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:24,961 adding 'biom/tests/bench_tables/10x1000x0.010_bench.biom.gz' 2023-01-03T19:10:24,975 adding 'biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:24,980 adding 'biom/tests/bench_tables/10x1000x0.100_bench.biom.gz' 2023-01-03T19:10:24,993 adding 'biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:24,998 adding 'biom/tests/bench_tables/10x100x0.001_bench.biom.gz' 2023-01-03T19:10:25,003 adding 'biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:25,006 adding 'biom/tests/bench_tables/10x100x0.010_bench.biom.gz' 2023-01-03T19:10:25,012 adding 'biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:25,015 adding 'biom/tests/bench_tables/10x100x0.100_bench.biom.gz' 2023-01-03T19:10:25,021 adding 'biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:25,025 adding 'biom/tests/bench_tables/10x10x0.001_bench.biom.gz' 2023-01-03T19:10:25,030 adding 'biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz' 2023-01-03T19:10:25,033 adding 'biom/tests/bench_tables/10x10x0.010_bench.biom.gz' 2023-01-03T19:10:25,038 adding 'biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz' 2023-01-03T19:10:25,041 adding 'biom/tests/bench_tables/10x10x0.100_bench.biom.gz' 2023-01-03T19:10:25,046 adding 'biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz' 2023-01-03T19:10:25,051 adding 'biom/tests/test_cli/__init__.py' 2023-01-03T19:10:25,054 adding 'biom/tests/test_cli/test_add_metadata.py' 2023-01-03T19:10:25,057 adding 'biom/tests/test_cli/test_show_install_info.py' 2023-01-03T19:10:25,060 adding 'biom/tests/test_cli/test_subset_table.py' 2023-01-03T19:10:25,064 adding 'biom/tests/test_cli/test_summarize_table.py' 2023-01-03T19:10:25,068 adding 'biom/tests/test_cli/test_table_converter.py' 2023-01-03T19:10:25,071 adding 'biom/tests/test_cli/test_table_normalizer.py' 2023-01-03T19:10:25,074 adding 'biom/tests/test_cli/test_uc_processor.py' 2023-01-03T19:10:25,079 adding 'biom/tests/test_cli/test_validate_table.py' 2023-01-03T19:10:25,084 adding 'biom/tests/test_cli/test_data/json_obs_collapsed.biom' 2023-01-03T19:10:25,086 adding 'biom/tests/test_cli/test_data/json_sample_collapsed.biom' 2023-01-03T19:10:25,093 adding 'biom/tests/test_cli/test_data/test.biom' 2023-01-03T19:10:25,096 adding 'biom/tests/test_cli/test_data/test.json' 2023-01-03T19:10:25,100 adding 'biom/tests/test_data/__init__.py' 2023-01-03T19:10:25,102 adding 'biom/tests/test_data/bad_table.txt' 2023-01-03T19:10:25,104 adding 'biom/tests/test_data/bad_table.txt.gz' 2023-01-03T19:10:25,109 adding 'biom/tests/test_data/empty.biom' 2023-01-03T19:10:25,112 adding 'biom/tests/test_data/no-contents.biom' 2023-01-03T19:10:25,118 adding 'biom/tests/test_data/test.biom' 2023-01-03T19:10:25,122 adding 'biom/tests/test_data/test.json' 2023-01-03T19:10:25,125 adding 'biom/tests/test_data/test.json.gz' 2023-01-03T19:10:25,130 adding 'biom_format-2.1.14.dist-info/COPYING.txt' 2023-01-03T19:10:25,132 adding 'biom_format-2.1.14.dist-info/METADATA' 2023-01-03T19:10:25,134 adding 'biom_format-2.1.14.dist-info/WHEEL' 2023-01-03T19:10:25,136 adding 'biom_format-2.1.14.dist-info/entry_points.txt' 2023-01-03T19:10:25,138 adding 'biom_format-2.1.14.dist-info/top_level.txt' 2023-01-03T19:10:25,145 adding 'biom_format-2.1.14.dist-info/RECORD' 2023-01-03T19:10:25,513 removing build/bdist.linux-armv7l/wheel 2023-01-03T19:10:25,632 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.assets' as data is deprecated, please list it in `packages`. 2023-01-03T19:10:25,632 !! 2023-01-03T19:10:25,633 ############################ 2023-01-03T19:10:25,634 # Package would be ignored # 2023-01-03T19:10:25,634 ############################ 2023-01-03T19:10:25,634 Python recognizes 'biom.assets' as an importable package, 2023-01-03T19:10:25,635 but it is not listed in the `packages` configuration of setuptools. 2023-01-03T19:10:25,635 'biom.assets' has been automatically added to the distribution only 2023-01-03T19:10:25,636 because it may contain data files, but this behavior is likely to change 2023-01-03T19:10:25,636 in future versions of setuptools (and therefore is considered deprecated). 2023-01-03T19:10:25,637 Please make sure that 'biom.assets' is included as a package by using 2023-01-03T19:10:25,637 the `packages` configuration field or the proper discovery methods 2023-01-03T19:10:25,637 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-03T19:10:25,638 instead of `find_packages(...)`/`find:`). 2023-01-03T19:10:25,638 You can read more about "package discovery" and "data files" on setuptools 2023-01-03T19:10:25,639 documentation page. 2023-01-03T19:10:25,640 !! 2023-01-03T19:10:25,640 check.warn(importable) 2023-01-03T19:10:25,641 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.bench_tables' as data is deprecated, please list it in `packages`. 2023-01-03T19:10:25,641 !! 2023-01-03T19:10:25,642 ############################ 2023-01-03T19:10:25,642 # Package would be ignored # 2023-01-03T19:10:25,643 ############################ 2023-01-03T19:10:25,643 Python recognizes 'biom.tests.bench_tables' as an importable package, 2023-01-03T19:10:25,643 but it is not listed in the `packages` configuration of setuptools. 2023-01-03T19:10:25,644 'biom.tests.bench_tables' has been automatically added to the distribution only 2023-01-03T19:10:25,644 because it may contain data files, but this behavior is likely to change 2023-01-03T19:10:25,644 in future versions of setuptools (and therefore is considered deprecated). 2023-01-03T19:10:25,645 Please make sure that 'biom.tests.bench_tables' is included as a package by using 2023-01-03T19:10:25,645 the `packages` configuration field or the proper discovery methods 2023-01-03T19:10:25,646 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-03T19:10:25,646 instead of `find_packages(...)`/`find:`). 2023-01-03T19:10:25,646 You can read more about "package discovery" and "data files" on setuptools 2023-01-03T19:10:25,647 documentation page. 2023-01-03T19:10:25,648 !! 2023-01-03T19:10:25,648 check.warn(importable) 2023-01-03T19:10:25,649 /tmp/pip-build-env-b3tzqwsb/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'biom.tests.test_cli.test_data' as data is deprecated, please list it in `packages`. 2023-01-03T19:10:25,649 !! 2023-01-03T19:10:25,651 ############################ 2023-01-03T19:10:25,651 # Package would be ignored # 2023-01-03T19:10:25,651 ############################ 2023-01-03T19:10:25,652 Python recognizes 'biom.tests.test_cli.test_data' as an importable package, 2023-01-03T19:10:25,652 but it is not listed in the `packages` configuration of setuptools. 2023-01-03T19:10:25,653 'biom.tests.test_cli.test_data' has been automatically added to the distribution only 2023-01-03T19:10:25,654 because it may contain data files, but this behavior is likely to change 2023-01-03T19:10:25,654 in future versions of setuptools (and therefore is considered deprecated). 2023-01-03T19:10:25,655 Please make sure that 'biom.tests.test_cli.test_data' is included as a package by using 2023-01-03T19:10:25,656 the `packages` configuration field or the proper discovery methods 2023-01-03T19:10:25,656 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-03T19:10:25,656 instead of `find_packages(...)`/`find:`). 2023-01-03T19:10:25,657 You can read more about "package discovery" and "data files" on setuptools 2023-01-03T19:10:25,657 documentation page. 2023-01-03T19:10:25,659 !! 2023-01-03T19:10:25,659 check.warn(importable) 2023-01-03T19:10:26,016 Building wheel for biom-format (pyproject.toml): finished with status 'done' 2023-01-03T19:10:26,737 Created wheel for biom-format: filename=biom_format-2.1.14-cp37-cp37m-linux_armv7l.whl size=11820091 sha256=45dd2e44b2b46efdafb7678246b670cff402736187481b12f037d7f0c4d8f8e1 2023-01-03T19:10:26,740 Stored in directory: /tmp/pip-ephem-wheel-cache-gu4o3l5m/wheels/2a/6a/67/07d6070dccd90ec5101db6416781ad3c27e7d93b4e796dae79 2023-01-03T19:10:26,790 Successfully built biom-format 2023-01-03T19:10:27,691 Removed build tracker: '/tmp/pip-build-tracker-t1im_1w2'