2023-01-09T09:34:02,290 Created temporary directory: /tmp/pip-ephem-wheel-cache-mn3x1jsz 2023-01-09T09:34:02,292 Created temporary directory: /tmp/pip-build-tracker-5k45obv_ 2023-01-09T09:34:02,292 Initialized build tracking at /tmp/pip-build-tracker-5k45obv_ 2023-01-09T09:34:02,292 Created build tracker: /tmp/pip-build-tracker-5k45obv_ 2023-01-09T09:34:02,292 Entered build tracker: /tmp/pip-build-tracker-5k45obv_ 2023-01-09T09:34:02,293 Created temporary directory: /tmp/pip-wheel-a6oj6ivp 2023-01-09T09:34:02,296 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2023-01-09T09:34:02,298 Created temporary directory: /tmp/pip-ephem-wheel-cache-xl7mdqz2 2023-01-09T09:34:02,321 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-01-09T09:34:02,325 2 location(s) to search for versions of emzed: 2023-01-09T09:34:02,325 * https://pypi.org/simple/emzed/ 2023-01-09T09:34:02,325 * https://www.piwheels.org/simple/emzed/ 2023-01-09T09:34:02,325 Fetching project page and analyzing links: https://pypi.org/simple/emzed/ 2023-01-09T09:34:02,326 Getting page https://pypi.org/simple/emzed/ 2023-01-09T09:34:02,327 Found index url https://pypi.org/simple 2023-01-09T09:34:02,399 Fetched page https://pypi.org/simple/emzed/ as application/vnd.pypi.simple.v1+json 2023-01-09T09:34:02,420 Found link https://files.pythonhosted.org/packages/ac/e0/efad3689bc40c7ecbc85d9fd30595e6458055b5f5e627bf5ce261b79b8a6/emzed-2.10.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.0 2023-01-09T09:34:02,420 Found link https://files.pythonhosted.org/packages/48/b7/ed17ede3fc122860cc84a32a3f3eee8ec52399eba7765f9fefbcd959f548/emzed-2.10.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.10.1 2023-01-09T09:34:02,421 Found link https://files.pythonhosted.org/packages/c5/e2/c579987fdbf59648bb5ac4d4fded43f9b87f9b78b82582de8bba547db574/emzed-2.10.2.zip (from https://pypi.org/simple/emzed/), version: 2.10.2 2023-01-09T09:34:02,421 Found link https://files.pythonhosted.org/packages/f1/9a/147fc2ac5a015ac057452d4372a7d1d041f70410338e7ce68ccccbb9148c/emzed-2.11.1.win-amd64.zip (from https://pypi.org/simple/emzed/), version: 2.11.1.win-amd64 2023-01-09T09:34:02,421 Found link https://files.pythonhosted.org/packages/e6/53/e7ccf9447a21722eb0b73153b73917b5a2ecc6230a8fb60a60e81fcbfbb0/emzed-2.11.1.zip (from https://pypi.org/simple/emzed/), version: 2.11.1 2023-01-09T09:34:02,422 Found link 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https://files.pythonhosted.org/packages/4d/c9/49662a6bb31a8d71369e4d0b636b68ed99156ba940b0d86212710aca485c/emzed-2.13.1.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.1 2023-01-09T09:34:02,427 Found link https://files.pythonhosted.org/packages/93/4f/ec3c9240434a037217f9e9817678b2125c1a741ca19e7b49fe12ffac528c/emzed-2.13.2.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.2 2023-01-09T09:34:02,427 Found link https://files.pythonhosted.org/packages/ec/b0/48b21b691973e6d9851ef741423619ae72c0bde96917f5d97116f3328b83/emzed-2.13.3.tar.gz (from https://pypi.org/simple/emzed/), version: 2.13.3 2023-01-09T09:34:02,427 Found link https://files.pythonhosted.org/packages/b8/3f/83bbc74a085eabd252ce58c821aeb9122790a07c11e382ae43eca9177ebd/emzed-2.14.0.tar.gz (from https://pypi.org/simple/emzed/), version: 2.14.0 2023-01-09T09:34:02,428 Found link https://files.pythonhosted.org/packages/db/a3/52cae75878dc5132237d4d4de469839ecb4041a3b7e63815f90a6c93a7cf/emzed-2.14.1.tar.gz (from 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https://www.piwheels.org/simple/emzed/emzed-2.11.2-py3-none-any.whl#sha256=23df32acaeca5808a90d0fbb457936ed20873280bc00ec571dfd6f9ead7fcc38 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T09:34:02,679 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.11.1-py3-none-any.whl#sha256=c3e7939f25dc51cf36a6c74da5da37fd43de8b46600793dbf2faee65442a449a (from https://www.piwheels.org/simple/emzed/) 2023-01-09T09:34:02,679 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.2-py3-none-any.whl#sha256=9ed9bbbfa797edad31f5e430d871121c9b71ba4d5f0e242a2d78c31ff05c7895 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T09:34:02,679 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.1-py3-none-any.whl#sha256=4e6f93fddc7e3db9b310df54491deca02efb5fad03ad72cced63702e014ad419 (from https://www.piwheels.org/simple/emzed/) 2023-01-09T09:34:02,679 Skipping link: No binaries permitted for emzed: https://www.piwheels.org/simple/emzed/emzed-2.10.0-py3-none-any.whl#sha256=765232d1a671848379b1cbcea69506fedb5aab108760664426dc27204e46eeaf (from https://www.piwheels.org/simple/emzed/) 2023-01-09T09:34:02,680 Skipping link: not a file: https://www.piwheels.org/simple/emzed/ 2023-01-09T09:34:02,680 Skipping link: not a file: https://pypi.org/simple/emzed/ 2023-01-09T09:34:02,715 Given no hashes to check 1 links for project 'emzed': discarding no candidates 2023-01-09T09:34:02,733 Collecting emzed==3.0.0a4 2023-01-09T09:34:02,735 Created temporary directory: /tmp/pip-unpack-btet7ocn 2023-01-09T09:34:02,784 Downloading emzed-3.0.0a4.tar.gz (572 kB) 2023-01-09T09:34:03,349 Added emzed==3.0.0a4 from https://files.pythonhosted.org/packages/a3/aa/79d4881c1c14e2601228d412bf74077b4445b923fcb2a93fc2844e85f8d5/emzed-3.0.0a4.tar.gz to build tracker '/tmp/pip-build-tracker-5k45obv_' 2023-01-09T09:34:03,350 Running setup.py (path:/tmp/pip-wheel-a6oj6ivp/emzed_f838d0c310d248218c274a4140be7b89/setup.py) egg_info for package emzed 2023-01-09T09:34:03,351 Created temporary directory: /tmp/pip-pip-egg-info-yzr73v7x 2023-01-09T09:34:03,351 Preparing metadata (setup.py): started 2023-01-09T09:34:03,352 Running command python setup.py egg_info 2023-01-09T09:34:04,484 running egg_info 2023-01-09T09:34:04,486 creating /tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info 2023-01-09T09:34:04,519 writing /tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/PKG-INFO 2023-01-09T09:34:04,521 writing dependency_links to /tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/dependency_links.txt 2023-01-09T09:34:04,524 writing requirements to /tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/requires.txt 2023-01-09T09:34:04,525 writing top-level names to /tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/top_level.txt 2023-01-09T09:34:04,526 writing manifest file '/tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/SOURCES.txt' 2023-01-09T09:34:04,627 reading manifest file '/tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/SOURCES.txt' 2023-01-09T09:34:04,629 reading manifest template 'MANIFEST.in' 2023-01-09T09:34:04,976 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T09:34:04,976 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T09:34:04,977 adding license file 'LICENSE' 2023-01-09T09:34:04,984 writing manifest file '/tmp/pip-pip-egg-info-yzr73v7x/emzed.egg-info/SOURCES.txt' 2023-01-09T09:34:05,100 Preparing metadata (setup.py): finished with status 'done' 2023-01-09T09:34:05,106 Source in /tmp/pip-wheel-a6oj6ivp/emzed_f838d0c310d248218c274a4140be7b89 has version 3.0.0a4, which satisfies requirement emzed==3.0.0a4 from https://files.pythonhosted.org/packages/a3/aa/79d4881c1c14e2601228d412bf74077b4445b923fcb2a93fc2844e85f8d5/emzed-3.0.0a4.tar.gz 2023-01-09T09:34:05,107 Removed emzed==3.0.0a4 from https://files.pythonhosted.org/packages/a3/aa/79d4881c1c14e2601228d412bf74077b4445b923fcb2a93fc2844e85f8d5/emzed-3.0.0a4.tar.gz from build tracker '/tmp/pip-build-tracker-5k45obv_' 2023-01-09T09:34:05,112 Created temporary directory: /tmp/pip-unpack-402lhp9p 2023-01-09T09:34:05,112 Building wheels for collected packages: emzed 2023-01-09T09:34:05,117 Created temporary directory: /tmp/pip-wheel-bbpzewct 2023-01-09T09:34:05,118 Building wheel for emzed (setup.py): started 2023-01-09T09:34:05,119 Destination directory: /tmp/pip-wheel-bbpzewct 2023-01-09T09:34:05,119 Running command python setup.py bdist_wheel 2023-01-09T09:34:06,231 running bdist_wheel 2023-01-09T09:34:06,300 running build 2023-01-09T09:34:06,300 running build_py 2023-01-09T09:34:06,326 creating build 2023-01-09T09:34:06,333 creating build/lib.linux-armv7l-cpython-39 2023-01-09T09:34:06,333 creating build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,334 copying src/emzed/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,336 copying src/emzed/gui.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,338 copying src/emzed/check_pyopenms.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,340 copying src/emzed/__main__.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,342 copying src/emzed/ext.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,343 copying src/emzed/db.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,345 copying src/emzed/io.py -> build/lib.linux-armv7l-cpython-39/emzed 2023-01-09T09:34:06,348 creating build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T09:34:06,349 copying src/emzed/quantification/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T09:34:06,351 copying src/emzed/quantification/peak_integration.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification 2023-01-09T09:34:06,354 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T09:34:06,354 copying src/emzed/pyopenms/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T09:34:06,357 copying src/emzed/pyopenms/optimizations.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T09:34:06,359 copying src/emzed/pyopenms/object_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T09:34:06,361 copying src/emzed/pyopenms/pyopenms_client.py -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms 2023-01-09T09:34:06,363 creating build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T09:34:06,364 copying src/emzed/annotate/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T09:34:06,366 copying src/emzed/annotate/annotate_adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/annotate 2023-01-09T09:34:06,369 creating build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T09:34:06,370 copying src/emzed/config/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T09:34:06,372 copying src/emzed/config/config.py -> build/lib.linux-armv7l-cpython-39/emzed/config 2023-01-09T09:34:06,374 creating build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T09:34:06,375 copying src/emzed/r_connect/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T09:34:06,377 copying src/emzed/r_connect/r_executor.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T09:34:06,379 copying src/emzed/r_connect/patched_pyper.py -> build/lib.linux-armv7l-cpython-39/emzed/r_connect 2023-01-09T09:34:06,382 creating build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T09:34:06,382 copying src/emzed/optimized/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T09:34:06,385 creating build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,386 copying src/emzed/core/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,388 copying src/emzed/core/multiprocessing.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,390 copying src/emzed/core/db_backed_dictionary.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,392 copying src/emzed/core/exceptions.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,394 copying src/emzed/core/hashes.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,395 copying src/emzed/core/db_backed_model.py -> build/lib.linux-armv7l-cpython-39/emzed/core 2023-01-09T09:34:06,398 creating build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,399 copying src/emzed/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,401 copying src/emzed/utils/sqlite.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,403 copying src/emzed/utils/busy_indicator.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,405 copying src/emzed/utils/lookup.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,407 copying src/emzed/utils/has_emzed_gui.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,408 copying src/emzed/utils/functools.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,410 copying src/emzed/utils/download.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,412 copying src/emzed/utils/temp_file_handling.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,414 copying src/emzed/utils/align_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/utils 2023-01-09T09:34:06,416 creating build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T09:34:06,417 copying src/emzed/peak_picking/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T09:34:06,419 copying src/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T09:34:06,421 copying src/emzed/peak_picking/extract_chromatograms.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T09:34:06,423 copying src/emzed/peak_picking/_run_feature_finder_metabo.py -> build/lib.linux-armv7l-cpython-39/emzed/peak_picking 2023-01-09T09:34:06,427 creating build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,428 copying src/emzed/table/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,430 copying src/emzed/table/delete_rows.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,432 copying src/emzed/table/expressions.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,435 copying src/emzed/table/base_models.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,438 copying src/emzed/table/add_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,440 copying src/emzed/table/col_types.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,442 copying src/emzed/table/replace_column.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,445 copying src/emzed/table/row_class.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,447 copying src/emzed/table/table_migrations.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,449 copying src/emzed/table/load_into_from.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,450 copying src/emzed/table/collapse.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,452 copying src/emzed/table/table.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,456 copying src/emzed/table/immutable_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,458 copying src/emzed/table/group_by.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,460 copying src/emzed/table/table_utils.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,463 copying src/emzed/table/full_table_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,465 copying src/emzed/table/join.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,468 copying src/emzed/table/extract_columns_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,470 copying src/emzed/table/sort_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,472 copying src/emzed/table/prepare_table_cell_content.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,474 copying src/emzed/table/select_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,477 copying src/emzed/table/filter_model.py -> build/lib.linux-armv7l-cpython-39/emzed/table 2023-01-09T09:34:06,481 creating build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,482 copying src/emzed/chemistry/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,484 copying src/emzed/chemistry/fetch_elements_pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,485 copying src/emzed/chemistry/fit_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,488 copying src/emzed/chemistry/abundance.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,489 copying src/emzed/chemistry/mass.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,491 copying src/emzed/chemistry/formula_parser.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,493 copying src/emzed/chemistry/isotope_generator.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,495 copying src/emzed/chemistry/molecular_formula.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,497 copying src/emzed/chemistry/elements.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,499 copying src/emzed/chemistry/adducts.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,501 copying src/emzed/chemistry/pubchem.py -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:06,504 creating build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,505 copying src/emzed/align/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,507 copying src/emzed/align/mz_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,509 copying src/emzed/align/sample_alignment.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,511 copying src/emzed/align/rt_align.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,514 copying src/emzed/align/mz_align_routines.py -> build/lib.linux-armv7l-cpython-39/emzed/align 2023-01-09T09:34:06,517 creating build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T09:34:06,518 copying src/emzed/targeted/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T09:34:06,520 copying src/emzed/targeted/solution_space.py -> build/lib.linux-armv7l-cpython-39/emzed/targeted 2023-01-09T09:34:06,522 creating build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T09:34:06,523 copying src/emzed/ms_data/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T09:34:06,525 copying src/emzed/ms_data/peak_map.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T09:34:06,529 copying src/emzed/ms_data/peak_map_hasher.py -> build/lib.linux-armv7l-cpython-39/emzed/ms_data 2023-01-09T09:34:06,531 creating build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T09:34:06,532 copying src/emzed/ms2/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T09:34:06,534 copying src/emzed/ms2/sirius_export.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T09:34:06,535 copying src/emzed/ms2/attach_ms2_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T09:34:06,538 copying src/emzed/ms2/merge_spectra.py -> build/lib.linux-armv7l-cpython-39/emzed/ms2 2023-01-09T09:34:06,540 creating build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,541 copying src/emzed/quantification/peak_shape_models/__init__.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,543 copying src/emzed/quantification/peak_shape_models/no_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,544 copying src/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,546 copying src/emzed/quantification/peak_shape_models/base.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,548 copying src/emzed/quantification/peak_shape_models/savgol_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,550 copying src/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,551 copying src/emzed/quantification/peak_shape_models/simplified_emg.py -> build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models 2023-01-09T09:34:06,554 running egg_info 2023-01-09T09:34:06,613 writing src/emzed.egg-info/PKG-INFO 2023-01-09T09:34:06,615 writing dependency_links to src/emzed.egg-info/dependency_links.txt 2023-01-09T09:34:06,617 writing requirements to src/emzed.egg-info/requires.txt 2023-01-09T09:34:06,619 writing top-level names to src/emzed.egg-info/top_level.txt 2023-01-09T09:34:06,655 reading manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T09:34:06,660 reading manifest template 'MANIFEST.in' 2023-01-09T09:34:06,784 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-01-09T09:34:06,785 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-01-09T09:34:06,786 adding license file 'LICENSE' 2023-01-09T09:34:06,794 writing manifest file 'src/emzed.egg-info/SOURCES.txt' 2023-01-09T09:34:06,798 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib' as data is deprecated, please list it in `packages`. 2023-01-09T09:34:06,798 !! 2023-01-09T09:34:06,798 ############################ 2023-01-09T09:34:06,798 # Package would be ignored # 2023-01-09T09:34:06,798 ############################ 2023-01-09T09:34:06,798 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib' as an importable package, 2023-01-09T09:34:06,799 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T09:34:06,799 'emzed.pyopenms._pyopenms_venv.lib' has been automatically added to the distribution only 2023-01-09T09:34:06,799 because it may contain data files, but this behavior is likely to change 2023-01-09T09:34:06,799 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T09:34:06,799 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib' is included as a package by using 2023-01-09T09:34:06,799 the `packages` configuration field or the proper discovery methods 2023-01-09T09:34:06,800 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T09:34:06,800 instead of `find_packages(...)`/`find:`). 2023-01-09T09:34:06,800 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T09:34:06,800 documentation page. 2023-01-09T09:34:06,800 !! 2023-01-09T09:34:06,801 check.warn(importable) 2023-01-09T09:34:06,801 /usr/local/lib/python3.9/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'emzed.pyopenms._pyopenms_venv.lib64' as data is deprecated, please list it in `packages`. 2023-01-09T09:34:06,801 !! 2023-01-09T09:34:06,801 ############################ 2023-01-09T09:34:06,801 # Package would be ignored # 2023-01-09T09:34:06,801 ############################ 2023-01-09T09:34:06,802 Python recognizes 'emzed.pyopenms._pyopenms_venv.lib64' as an importable package, 2023-01-09T09:34:06,802 but it is not listed in the `packages` configuration of setuptools. 2023-01-09T09:34:06,802 'emzed.pyopenms._pyopenms_venv.lib64' has been automatically added to the distribution only 2023-01-09T09:34:06,802 because it may contain data files, but this behavior is likely to change 2023-01-09T09:34:06,802 in future versions of setuptools (and therefore is considered deprecated). 2023-01-09T09:34:06,802 Please make sure that 'emzed.pyopenms._pyopenms_venv.lib64' is included as a package by using 2023-01-09T09:34:06,802 the `packages` configuration field or the proper discovery methods 2023-01-09T09:34:06,803 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-01-09T09:34:06,803 instead of `find_packages(...)`/`find:`). 2023-01-09T09:34:06,803 You can read more about "package discovery" and "data files" on setuptools 2023-01-09T09:34:06,803 documentation page. 2023-01-09T09:34:06,803 !! 2023-01-09T09:34:06,804 check.warn(importable) 2023-01-09T09:34:06,806 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv 2023-01-09T09:34:06,807 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T09:34:06,807 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T09:34:06,808 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T09:34:06,808 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T09:34:06,809 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T09:34:06,810 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T09:34:06,810 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,812 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,815 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,818 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,820 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,822 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,873 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,874 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,876 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,878 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,879 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,883 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,886 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,890 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,893 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T09:34:06,893 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T09:34:06,895 copying src/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T09:34:06,897 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T09:34:06,898 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T09:34:06,899 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T09:34:06,900 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T09:34:06,900 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T09:34:06,901 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T09:34:06,902 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,903 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,907 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,910 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,913 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,915 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:06,964 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,965 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,968 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:06,970 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,972 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,975 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,978 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,982 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:06,986 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T09:34:06,986 creating build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T09:34:06,988 copying src/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T09:34:06,990 copying src/emzed/optimized/formula_fit.c -> build/lib.linux-armv7l-cpython-39/emzed/optimized 2023-01-09T09:34:06,999 copying src/emzed/chemistry/Elements.xml -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:07,003 copying src/emzed/chemistry/elements_pubchem.json -> build/lib.linux-armv7l-cpython-39/emzed/chemistry 2023-01-09T09:34:07,018 running build_ext 2023-01-09T09:34:07,413 building 'emzed.optimized.formula_fit' extension 2023-01-09T09:34:07,414 creating build/temp.linux-armv7l-cpython-39 2023-01-09T09:34:07,415 creating build/temp.linux-armv7l-cpython-39/src 2023-01-09T09:34:07,416 creating build/temp.linux-armv7l-cpython-39/src/emzed 2023-01-09T09:34:07,417 creating build/temp.linux-armv7l-cpython-39/src/emzed/optimized 2023-01-09T09:34:07,419 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -c src/emzed/optimized/formula_fit.c -o build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o 2023-01-09T09:34:07,912 src/emzed/optimized/formula_fit.c: In function ‘__Pyx_ParseOptionalKeywords’: 2023-01-09T09:34:07,913 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,914 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,914 | ^ 2023-01-09T09:34:07,914 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,914 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,915 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,915 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,915 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,915 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,917 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,917 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,917 | ^ 2023-01-09T09:34:07,917 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,917 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,917 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,917 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T09:34:07,917 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T09:34:07,918 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,919 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,919 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,919 | ^ 2023-01-09T09:34:07,919 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,919 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,920 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,920 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,920 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,920 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,921 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,922 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,922 | ^ 2023-01-09T09:34:07,922 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,922 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,922 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,922 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,922 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,922 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,924 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,924 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,924 | ^ 2023-01-09T09:34:07,924 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,924 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,924 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,924 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T09:34:07,925 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T09:34:07,925 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,926 src/emzed/optimized/formula_fit.c:4091:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,926 4091 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,926 | ^ 2023-01-09T09:34:07,926 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,927 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,927 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,927 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,927 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,927 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,929 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,929 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,929 | ^ 2023-01-09T09:34:07,930 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,930 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,930 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,930 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,930 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,930 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,931 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,932 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,932 | ^ 2023-01-09T09:34:07,932 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,932 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,932 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,932 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T09:34:07,932 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T09:34:07,933 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,934 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,934 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,934 | ^ 2023-01-09T09:34:07,934 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,934 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,934 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,935 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,935 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,935 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,936 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,936 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,936 | ^ 2023-01-09T09:34:07,937 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,937 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,937 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,937 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,937 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,937 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,939 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,939 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,939 | ^ 2023-01-09T09:34:07,939 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,939 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,939 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,939 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2023-01-09T09:34:07,939 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2023-01-09T09:34:07,939 | ^~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:07,941 src/emzed/optimized/formula_fit.c:4107:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2023-01-09T09:34:07,941 4107 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2023-01-09T09:34:07,941 | ^ 2023-01-09T09:34:07,941 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2023-01-09T09:34:07,941 from /usr/include/python3.9/Python.h:97, 2023-01-09T09:34:07,942 from src/emzed/optimized/formula_fit.c:4: 2023-01-09T09:34:07,942 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2023-01-09T09:34:07,942 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2023-01-09T09:34:07,942 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-01-09T09:34:13,111 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/emzed/optimized/formula_fit.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so 2023-01-09T09:34:13,264 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2023-01-09T09:34:13,264 warnings.warn( 2023-01-09T09:34:13,288 installing to build/bdist.linux-armv7l/wheel 2023-01-09T09:34:13,289 running install 2023-01-09T09:34:13,313 running install_lib 2023-01-09T09:34:13,338 creating build/bdist.linux-armv7l 2023-01-09T09:34:13,339 creating build/bdist.linux-armv7l/wheel 2023-01-09T09:34:13,341 creating build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,342 copying build/lib.linux-armv7l-cpython-39/emzed/__init__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,344 creating build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T09:34:13,345 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T09:34:13,348 creating build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,349 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,351 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/no_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,353 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/asymmetric_gauss_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,355 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/base.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,357 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/savgol_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,359 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/linear_interpolation_model.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,360 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_shape_models/simplified_emg.py -> build/bdist.linux-armv7l/wheel/emzed/quantification/peak_shape_models 2023-01-09T09:34:13,363 copying build/lib.linux-armv7l-cpython-39/emzed/quantification/peak_integration.py -> build/bdist.linux-armv7l/wheel/emzed/quantification 2023-01-09T09:34:13,366 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T09:34:13,367 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T09:34:13,370 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv 2023-01-09T09:34:13,371 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64 2023-01-09T09:34:13,373 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9 2023-01-09T09:34:13,374 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages 2023-01-09T09:34:13,376 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms 2023-01-09T09:34:13,377 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share 2023-01-09T09:34:13,379 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T09:34:13,380 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,382 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,385 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,387 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,390 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,453 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,456 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,457 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,459 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,461 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,462 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,466 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,469 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,472 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,475 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools 2023-01-09T09:34:13,477 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T09:34:13,478 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command 2023-01-09T09:34:13,480 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib 2023-01-09T09:34:13,482 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9 2023-01-09T09:34:13,483 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages 2023-01-09T09:34:13,485 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms 2023-01-09T09:34:13,486 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share 2023-01-09T09:34:13,488 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS 2023-01-09T09:34:13,489 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,490 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,493 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,495 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,497 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,551 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY 2023-01-09T09:34:13,554 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,555 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,557 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP 2023-01-09T09:34:13,560 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,561 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,564 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,566 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,570 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING 2023-01-09T09:34:13,573 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools 2023-01-09T09:34:13,574 creating build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T09:34:13,575 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml -> build/bdist.linux-armv7l/wheel/emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command 2023-01-09T09:34:13,577 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/optimizations.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T09:34:13,580 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/object_handling.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T09:34:13,581 copying build/lib.linux-armv7l-cpython-39/emzed/pyopenms/pyopenms_client.py -> build/bdist.linux-armv7l/wheel/emzed/pyopenms 2023-01-09T09:34:13,584 creating build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T09:34:13,585 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T09:34:13,586 copying build/lib.linux-armv7l-cpython-39/emzed/annotate/annotate_adducts.py -> build/bdist.linux-armv7l/wheel/emzed/annotate 2023-01-09T09:34:13,589 creating build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T09:34:13,590 copying build/lib.linux-armv7l-cpython-39/emzed/config/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T09:34:13,592 copying build/lib.linux-armv7l-cpython-39/emzed/config/config.py -> build/bdist.linux-armv7l/wheel/emzed/config 2023-01-09T09:34:13,594 creating build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T09:34:13,595 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T09:34:13,597 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/r_executor.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T09:34:13,599 copying build/lib.linux-armv7l-cpython-39/emzed/r_connect/patched_pyper.py -> build/bdist.linux-armv7l/wheel/emzed/r_connect 2023-01-09T09:34:13,601 copying build/lib.linux-armv7l-cpython-39/emzed/gui.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,603 creating build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T09:34:13,604 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T09:34:13,606 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.c -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T09:34:13,615 copying build/lib.linux-armv7l-cpython-39/emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/emzed/optimized 2023-01-09T09:34:13,625 creating build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,626 copying build/lib.linux-armv7l-cpython-39/emzed/core/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,628 copying build/lib.linux-armv7l-cpython-39/emzed/core/multiprocessing.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,630 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_dictionary.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,633 copying build/lib.linux-armv7l-cpython-39/emzed/core/exceptions.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,635 copying build/lib.linux-armv7l-cpython-39/emzed/core/hashes.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,636 copying build/lib.linux-armv7l-cpython-39/emzed/core/db_backed_model.py -> build/bdist.linux-armv7l/wheel/emzed/core 2023-01-09T09:34:13,639 creating build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,639 copying build/lib.linux-armv7l-cpython-39/emzed/utils/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,641 copying build/lib.linux-armv7l-cpython-39/emzed/utils/sqlite.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,644 copying build/lib.linux-armv7l-cpython-39/emzed/utils/busy_indicator.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,646 copying build/lib.linux-armv7l-cpython-39/emzed/utils/lookup.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,648 copying build/lib.linux-armv7l-cpython-39/emzed/utils/has_emzed_gui.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,649 copying build/lib.linux-armv7l-cpython-39/emzed/utils/functools.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,651 copying build/lib.linux-armv7l-cpython-39/emzed/utils/download.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,653 copying build/lib.linux-armv7l-cpython-39/emzed/utils/temp_file_handling.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,654 copying build/lib.linux-armv7l-cpython-39/emzed/utils/align_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/utils 2023-01-09T09:34:13,657 creating build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T09:34:13,658 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T09:34:13,660 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo_on_folder.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T09:34:13,662 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/extract_chromatograms.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T09:34:13,664 copying build/lib.linux-armv7l-cpython-39/emzed/peak_picking/_run_feature_finder_metabo.py -> build/bdist.linux-armv7l/wheel/emzed/peak_picking 2023-01-09T09:34:13,667 creating build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,668 copying build/lib.linux-armv7l-cpython-39/emzed/table/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,670 copying build/lib.linux-armv7l-cpython-39/emzed/table/delete_rows.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,672 copying build/lib.linux-armv7l-cpython-39/emzed/table/expressions.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,675 copying build/lib.linux-armv7l-cpython-39/emzed/table/base_models.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,678 copying build/lib.linux-armv7l-cpython-39/emzed/table/add_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,680 copying build/lib.linux-armv7l-cpython-39/emzed/table/col_types.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,682 copying build/lib.linux-armv7l-cpython-39/emzed/table/replace_column.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,684 copying build/lib.linux-armv7l-cpython-39/emzed/table/row_class.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,686 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_migrations.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,688 copying build/lib.linux-armv7l-cpython-39/emzed/table/load_into_from.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,689 copying build/lib.linux-armv7l-cpython-39/emzed/table/collapse.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,691 copying build/lib.linux-armv7l-cpython-39/emzed/table/table.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,695 copying build/lib.linux-armv7l-cpython-39/emzed/table/immutable_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,697 copying build/lib.linux-armv7l-cpython-39/emzed/table/group_by.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,699 copying build/lib.linux-armv7l-cpython-39/emzed/table/table_utils.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,702 copying build/lib.linux-armv7l-cpython-39/emzed/table/full_table_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,705 copying build/lib.linux-armv7l-cpython-39/emzed/table/join.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,707 copying build/lib.linux-armv7l-cpython-39/emzed/table/extract_columns_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,709 copying build/lib.linux-armv7l-cpython-39/emzed/table/sort_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,711 copying build/lib.linux-armv7l-cpython-39/emzed/table/prepare_table_cell_content.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,713 copying build/lib.linux-armv7l-cpython-39/emzed/table/select_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,715 copying build/lib.linux-armv7l-cpython-39/emzed/table/filter_model.py -> build/bdist.linux-armv7l/wheel/emzed/table 2023-01-09T09:34:13,718 creating build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,719 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,721 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/Elements.xml -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,725 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fetch_elements_pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,727 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/fit_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,729 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/abundance.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,731 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/mass.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,732 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/formula_parser.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,734 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/isotope_generator.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,737 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/molecular_formula.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,739 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements_pubchem.json -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,743 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/elements.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,745 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/adducts.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,747 copying build/lib.linux-armv7l-cpython-39/emzed/chemistry/pubchem.py -> build/bdist.linux-armv7l/wheel/emzed/chemistry 2023-01-09T09:34:13,750 creating build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,751 copying build/lib.linux-armv7l-cpython-39/emzed/align/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,753 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,755 copying build/lib.linux-armv7l-cpython-39/emzed/align/sample_alignment.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,757 copying build/lib.linux-armv7l-cpython-39/emzed/align/rt_align.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,760 copying build/lib.linux-armv7l-cpython-39/emzed/align/mz_align_routines.py -> build/bdist.linux-armv7l/wheel/emzed/align 2023-01-09T09:34:13,762 copying build/lib.linux-armv7l-cpython-39/emzed/check_pyopenms.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,764 copying build/lib.linux-armv7l-cpython-39/emzed/__main__.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,766 copying build/lib.linux-armv7l-cpython-39/emzed/ext.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,768 copying build/lib.linux-armv7l-cpython-39/emzed/db.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,770 creating build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T09:34:13,771 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T09:34:13,773 copying build/lib.linux-armv7l-cpython-39/emzed/targeted/solution_space.py -> build/bdist.linux-armv7l/wheel/emzed/targeted 2023-01-09T09:34:13,776 creating build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T09:34:13,776 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T09:34:13,778 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T09:34:13,782 copying build/lib.linux-armv7l-cpython-39/emzed/ms_data/peak_map_hasher.py -> build/bdist.linux-armv7l/wheel/emzed/ms_data 2023-01-09T09:34:13,784 copying build/lib.linux-armv7l-cpython-39/emzed/io.py -> build/bdist.linux-armv7l/wheel/emzed 2023-01-09T09:34:13,786 creating build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T09:34:13,787 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/__init__.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T09:34:13,789 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/sirius_export.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T09:34:13,791 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/attach_ms2_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T09:34:13,794 copying build/lib.linux-armv7l-cpython-39/emzed/ms2/merge_spectra.py -> build/bdist.linux-armv7l/wheel/emzed/ms2 2023-01-09T09:34:13,795 running install_egg_info 2023-01-09T09:34:13,824 Copying src/emzed.egg-info to build/bdist.linux-armv7l/wheel/emzed-3.0.0a4-py3.9.egg-info 2023-01-09T09:34:13,840 running install_scripts 2023-01-09T09:34:13,949 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2023-01-09T09:34:13,959 creating build/bdist.linux-armv7l/wheel/emzed-3.0.0a4.dist-info/WHEEL 2023-01-09T09:34:13,962 creating '/tmp/pip-wheel-bbpzewct/emzed-3.0.0a4-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-01-09T09:34:13,965 adding 'emzed/__init__.py' 2023-01-09T09:34:13,966 adding 'emzed/__main__.py' 2023-01-09T09:34:13,967 adding 'emzed/check_pyopenms.py' 2023-01-09T09:34:13,969 adding 'emzed/db.py' 2023-01-09T09:34:13,970 adding 'emzed/ext.py' 2023-01-09T09:34:13,971 adding 'emzed/gui.py' 2023-01-09T09:34:13,973 adding 'emzed/io.py' 2023-01-09T09:34:13,974 adding 'emzed/align/__init__.py' 2023-01-09T09:34:13,976 adding 'emzed/align/mz_align.py' 2023-01-09T09:34:13,977 adding 'emzed/align/mz_align_routines.py' 2023-01-09T09:34:13,979 adding 'emzed/align/rt_align.py' 2023-01-09T09:34:13,981 adding 'emzed/align/sample_alignment.py' 2023-01-09T09:34:13,982 adding 'emzed/annotate/__init__.py' 2023-01-09T09:34:13,984 adding 'emzed/annotate/annotate_adducts.py' 2023-01-09T09:34:13,988 adding 'emzed/chemistry/Elements.xml' 2023-01-09T09:34:13,990 adding 'emzed/chemistry/__init__.py' 2023-01-09T09:34:13,991 adding 'emzed/chemistry/abundance.py' 2023-01-09T09:34:13,992 adding 'emzed/chemistry/adducts.py' 2023-01-09T09:34:13,994 adding 'emzed/chemistry/elements.py' 2023-01-09T09:34:14,000 adding 'emzed/chemistry/elements_pubchem.json' 2023-01-09T09:34:14,002 adding 'emzed/chemistry/fetch_elements_pubchem.py' 2023-01-09T09:34:14,003 adding 'emzed/chemistry/fit_formula.py' 2023-01-09T09:34:14,005 adding 'emzed/chemistry/formula_parser.py' 2023-01-09T09:34:14,007 adding 'emzed/chemistry/isotope_generator.py' 2023-01-09T09:34:14,008 adding 'emzed/chemistry/mass.py' 2023-01-09T09:34:14,009 adding 'emzed/chemistry/molecular_formula.py' 2023-01-09T09:34:14,012 adding 'emzed/chemistry/pubchem.py' 2023-01-09T09:34:14,014 adding 'emzed/config/__init__.py' 2023-01-09T09:34:14,015 adding 'emzed/config/config.py' 2023-01-09T09:34:14,017 adding 'emzed/core/__init__.py' 2023-01-09T09:34:14,019 adding 'emzed/core/db_backed_dictionary.py' 2023-01-09T09:34:14,020 adding 'emzed/core/db_backed_model.py' 2023-01-09T09:34:14,021 adding 'emzed/core/exceptions.py' 2023-01-09T09:34:14,022 adding 'emzed/core/hashes.py' 2023-01-09T09:34:14,024 adding 'emzed/core/multiprocessing.py' 2023-01-09T09:34:14,026 adding 'emzed/ms2/__init__.py' 2023-01-09T09:34:14,027 adding 'emzed/ms2/attach_ms2_spectra.py' 2023-01-09T09:34:14,029 adding 'emzed/ms2/merge_spectra.py' 2023-01-09T09:34:14,030 adding 'emzed/ms2/sirius_export.py' 2023-01-09T09:34:14,032 adding 'emzed/ms_data/__init__.py' 2023-01-09T09:34:14,037 adding 'emzed/ms_data/peak_map.py' 2023-01-09T09:34:14,039 adding 'emzed/ms_data/peak_map_hasher.py' 2023-01-09T09:34:14,040 adding 'emzed/optimized/__init__.py' 2023-01-09T09:34:14,064 adding 'emzed/optimized/formula_fit.c' 2023-01-09T09:34:14,122 adding 'emzed/optimized/formula_fit.cpython-39-arm-linux-gnueabihf.so' 2023-01-09T09:34:14,126 adding 'emzed/peak_picking/__init__.py' 2023-01-09T09:34:14,128 adding 'emzed/peak_picking/_run_feature_finder_metabo.py' 2023-01-09T09:34:14,130 adding 'emzed/peak_picking/_run_feature_finder_metabo_on_folder.py' 2023-01-09T09:34:14,131 adding 'emzed/peak_picking/extract_chromatograms.py' 2023-01-09T09:34:14,134 adding 'emzed/pyopenms/__init__.py' 2023-01-09T09:34:14,135 adding 'emzed/pyopenms/object_handling.py' 2023-01-09T09:34:14,137 adding 'emzed/pyopenms/optimizations.py' 2023-01-09T09:34:14,138 adding 'emzed/pyopenms/pyopenms_client.py' 2023-01-09T09:34:14,144 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T09:34:14,146 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T09:34:14,148 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T09:34:14,149 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T09:34:14,254 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T09:34:14,271 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T09:34:14,273 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T09:34:14,275 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T09:34:14,277 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T09:34:14,279 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T09:34:14,282 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T09:34:14,284 adding 'emzed/pyopenms/_pyopenms_venv/lib/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T09:34:14,290 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes.xml' 2023-01-09T09:34:14,291 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml' 2023-01-09T09:34:14,293 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_default_config.xml' 2023-01-09T09:34:14,294 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/XTandem_residue_mass.bioml.xml' 2023-01-09T09:34:14,400 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/CHEMISTRY/unimod.xml' 2023-01-09T09:34:14,417 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPAS.appdata.xml' 2023-01-09T09:34:14,418 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/DESKTOP/TOPPView.appdata.xml' 2023-01-09T09:34:14,420 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/TraML-mapping.xml' 2023-01-09T09:34:14,422 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/ms-mapping.xml' 2023-01-09T09:34:14,425 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzIdentML-mapping.xml' 2023-01-09T09:34:14,427 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/pyopenms/share/OpenMS/MAPPING/mzdata-mapping.xml' 2023-01-09T09:34:14,429 adding 'emzed/pyopenms/_pyopenms_venv/lib64/python3.9/site-packages/setuptools/command/launcher manifest.xml' 2023-01-09T09:34:14,431 adding 'emzed/quantification/__init__.py' 2023-01-09T09:34:14,433 adding 'emzed/quantification/peak_integration.py' 2023-01-09T09:34:14,435 adding 'emzed/quantification/peak_shape_models/__init__.py' 2023-01-09T09:34:14,436 adding 'emzed/quantification/peak_shape_models/asymmetric_gauss_model.py' 2023-01-09T09:34:14,438 adding 'emzed/quantification/peak_shape_models/base.py' 2023-01-09T09:34:14,439 adding 'emzed/quantification/peak_shape_models/linear_interpolation_model.py' 2023-01-09T09:34:14,440 adding 'emzed/quantification/peak_shape_models/no_model.py' 2023-01-09T09:34:14,441 adding 'emzed/quantification/peak_shape_models/savgol_model.py' 2023-01-09T09:34:14,443 adding 'emzed/quantification/peak_shape_models/simplified_emg.py' 2023-01-09T09:34:14,445 adding 'emzed/r_connect/__init__.py' 2023-01-09T09:34:14,446 adding 'emzed/r_connect/patched_pyper.py' 2023-01-09T09:34:14,448 adding 'emzed/r_connect/r_executor.py' 2023-01-09T09:34:14,450 adding 'emzed/table/__init__.py' 2023-01-09T09:34:14,451 adding 'emzed/table/add_column.py' 2023-01-09T09:34:14,454 adding 'emzed/table/base_models.py' 2023-01-09T09:34:14,455 adding 'emzed/table/col_types.py' 2023-01-09T09:34:14,457 adding 'emzed/table/collapse.py' 2023-01-09T09:34:14,458 adding 'emzed/table/delete_rows.py' 2023-01-09T09:34:14,461 adding 'emzed/table/expressions.py' 2023-01-09T09:34:14,462 adding 'emzed/table/extract_columns_model.py' 2023-01-09T09:34:14,464 adding 'emzed/table/filter_model.py' 2023-01-09T09:34:14,466 adding 'emzed/table/full_table_model.py' 2023-01-09T09:34:14,467 adding 'emzed/table/group_by.py' 2023-01-09T09:34:14,469 adding 'emzed/table/immutable_table_model.py' 2023-01-09T09:34:14,470 adding 'emzed/table/join.py' 2023-01-09T09:34:14,472 adding 'emzed/table/load_into_from.py' 2023-01-09T09:34:14,473 adding 'emzed/table/prepare_table_cell_content.py' 2023-01-09T09:34:14,474 adding 'emzed/table/replace_column.py' 2023-01-09T09:34:14,476 adding 'emzed/table/row_class.py' 2023-01-09T09:34:14,477 adding 'emzed/table/select_model.py' 2023-01-09T09:34:14,478 adding 'emzed/table/sort_model.py' 2023-01-09T09:34:14,486 adding 'emzed/table/table.py' 2023-01-09T09:34:14,488 adding 'emzed/table/table_migrations.py' 2023-01-09T09:34:14,490 adding 'emzed/table/table_utils.py' 2023-01-09T09:34:14,492 adding 'emzed/targeted/__init__.py' 2023-01-09T09:34:14,493 adding 'emzed/targeted/solution_space.py' 2023-01-09T09:34:14,495 adding 'emzed/utils/__init__.py' 2023-01-09T09:34:14,496 adding 'emzed/utils/align_spectra.py' 2023-01-09T09:34:14,498 adding 'emzed/utils/busy_indicator.py' 2023-01-09T09:34:14,499 adding 'emzed/utils/download.py' 2023-01-09T09:34:14,500 adding 'emzed/utils/functools.py' 2023-01-09T09:34:14,501 adding 'emzed/utils/has_emzed_gui.py' 2023-01-09T09:34:14,502 adding 'emzed/utils/lookup.py' 2023-01-09T09:34:14,504 adding 'emzed/utils/sqlite.py' 2023-01-09T09:34:14,505 adding 'emzed/utils/temp_file_handling.py' 2023-01-09T09:34:14,512 adding 'emzed-3.0.0a4.dist-info/LICENSE' 2023-01-09T09:34:14,513 adding 'emzed-3.0.0a4.dist-info/METADATA' 2023-01-09T09:34:14,514 adding 'emzed-3.0.0a4.dist-info/WHEEL' 2023-01-09T09:34:14,515 adding 'emzed-3.0.0a4.dist-info/top_level.txt' 2023-01-09T09:34:14,517 adding 'emzed-3.0.0a4.dist-info/RECORD' 2023-01-09T09:34:14,531 removing build/bdist.linux-armv7l/wheel 2023-01-09T09:34:14,759 Building wheel for emzed (setup.py): finished with status 'done' 2023-01-09T09:34:14,771 Created wheel for emzed: filename=emzed-3.0.0a4-cp39-cp39-linux_armv7l.whl size=762496 sha256=f436503363f18d8da031b7d839f632980bb88cbdc933078f98e69d31006d33ae 2023-01-09T09:34:14,772 Stored in directory: /tmp/pip-ephem-wheel-cache-xl7mdqz2/wheels/02/08/ac/bd6be9462ef9f0096f0e579b07dabb59590a88f3100831d7ea 2023-01-09T09:34:14,789 Successfully built emzed 2023-01-09T09:34:14,816 Removed build tracker: '/tmp/pip-build-tracker-5k45obv_'